ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf174b18 |
|---|---|
| Clone Library Name | barley_pub |
>P40602:APG_ARATH Anter-specific proline-rich protein APG precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 534 Score = 213 bits (543), Expect = 1e-54 Identities = 121/328 (36%), Positives = 171/328 (52%), Gaps = 10/328 (3%) Frame = +2 Query: 146 VPGVFTFGDSTVDIGNNDYLHTLIKADFPPYGRDFPNRVATGRFCNGKLATDITADTLGF 325 +P VF FGDS D GNN+ L T IK+++ PYG DF RVATGRF NG +A+D A +G Sbjct: 202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGV 261 Query: 326 TSYPPAYLSPQASGKNLLIGANFASAGSGYYDHTALMYHAIPFSQQLEYFREYQSKLS-- 499 PAYL P+ +LL G +FAS G+GY T+ +AIP QL YF++Y K++ Sbjct: 262 KEIVPAYLDPKIQPNDLLTGVSFASGGAGYNPTTSEAANAIPMLDQLTYFQDYIEKVNRL 321 Query: 500 --------AFAGSSQAKSIISGSLYIVSFGASDFVQNYYINPLLFKTQTVDQFSDRLVSI 655 AG + +IS + IV G++D + Y+ + +D ++ + Sbjct: 322 VRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITYFGSGAQRLKNDIDSYTTIIADS 381 Query: 656 FVNSATQLYGMGARRIAVTTLPPLGCLPAAITLFGHGSTGCVSRLNSDSQRFNGKMSAAV 835 + QLYG GARRI V PPLGC+P+ C LN SQ FN K+ + Sbjct: 382 AASFVLQLYGYGARRIGVIGTPPLGCVPSQRL---KKKKICNEELNYASQLFNSKLLLIL 438 Query: 836 SSLAKRYHDLKIAVFDIYTPLYSLVTSPGGQGFTEAKRGCCGTGKVEFTVFLCNPKSVGT 1015 L+K + DIYT + ++ +P GF E K+ CC TG + LC + Sbjct: 439 GQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTGLLSAGA-LCKKSTSKI 497 Query: 1016 CSNASTYVFWDAVHPSEAANQVIADALL 1099 C N S+Y+FWD VHP++ A + I L+ Sbjct: 498 CPNTSSYLFWDGVHPTQRAYKTINKVLI 525
>P40603:APG_BRANA Anther-specific proline-rich protein APG - Brassica napus (Rape)| Length = 449 Score = 210 bits (534), Expect = 1e-53 Identities = 116/318 (36%), Positives = 166/318 (52%), Gaps = 6/318 (1%) Frame = +2 Query: 146 VPGVFTFGDSTVDIGNNDYLHTLIKADFPPYGRDFPNRVATGRFCNGKLATDITADTLGF 325 +P VF FGDS D GNN+ L T +K ++ PYG DFP VATGRF NG++A+D + LG Sbjct: 123 IPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGV 182 Query: 326 TSYPPAYLSPQASGKN------LLIGANFASAGSGYYDHTALMYHAIPFSQQLEYFREYQ 487 PAY+ + N LL G +FAS G+GY T+ + QL YF++Y+ Sbjct: 183 KEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSESWKVTTMLDQLTYFQDYK 242 Query: 488 SKLSAFAGSSQAKSIISGSLYIVSFGASDFVQNYYINPLLFKTQTVDQFSDRLVSIFVNS 667 ++ G + K I+S IV G++D + Y+ N VD F+ + + Sbjct: 243 KRMKKLVGKKKTKKIVSKGAAIVVAGSNDLIYTYFGNGAQHLKNDVDSFTTMMADSAASF 302 Query: 668 ATQLYGMGARRIAVTTLPPLGCLPAAITLFGHGSTGCVSRLNSDSQRFNGKMSAAVSSLA 847 QLYG GARRI V PP+GC P+ C LN +Q FN K+ + L+ Sbjct: 303 VLQLYGYGARRIGVIGTPPIGCTPSQRV---KKKKICNEDLNYAAQLFNSKLVIILGQLS 359 Query: 848 KRYHDLKIAVFDIYTPLYSLVTSPGGQGFTEAKRGCCGTGKVEFTVFLCNPKSVGTCSNA 1027 K + I DIY+ ++ SP GF E K+ CC G + VF C +++ SNA Sbjct: 360 KTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLTKGGVF-CKERTLKNMSNA 418 Query: 1028 STYVFWDAVHPSEAANQV 1081 S+Y+FWD +HPS+ A ++ Sbjct: 419 SSYLFWDGLHPSQRAYEI 436
>Q9FXE5:FUCO3_ARATH Alpha-L-fucosidase 3 precursor - Arabidopsis thaliana (Mouse-ear| cress) Length = 372 Score = 127 bits (319), Expect = 1e-28 Identities = 101/343 (29%), Positives = 148/343 (43%), Gaps = 27/343 (7%) Frame = +2 Query: 149 PGVFTFGDSTVDIGNNDYLHTLIKADFPPYGRDFPNRVATGRFCNGKLATDITADTLGFT 328 P +F FGDS D G L PP+G F A GR+C+G+L D A++LG Sbjct: 29 PAIFNFGDSNSDTGG---LSAAFGQAGPPHGSSFFGSPA-GRYCDGRLVIDFIAESLGLP 84 Query: 329 SYPPAYLSPQASGKNLLIGANFASAGSGY--YDHTALMYHAIPFSQQLEYFREY------ 484 Y A+L + G N GANFA+AGS + T PFS +++ + Y Sbjct: 85 -YLSAFLD--SVGSNFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNFHNRS 141 Query: 485 ---QSKLSAFAGSSQAKSIISGSLYIVSFGASDFVQNYYINPLLFKTQTVDQFSDRLVSI 655 +S+ + S +LY G +D Y+ N + + +T ++S Sbjct: 142 QTVRSRGGVYKTMLPESDSFSKALYTFDIGQNDLTAGYFANKTVEQVETE---VPEIISQ 198 Query: 656 FVNSATQLYGMGARRIAVTTLPPLGCLPAAITLFGH-----GSTGCVSRLNSDSQRFNGK 820 F+N+ +YG G R + P+GCL I F + S GCVS LN +Q+FN Sbjct: 199 FMNAIKNIYGQGGRYFWIHNTGPIGCLAYVIERFPNKASDFDSHGCVSPLNHLAQQFNHA 258 Query: 821 MSAAVSSLAKRYHDLKIAVFDIYTPLYSLVTSPGGQGFTEAKRGCCG-TGKVEFTVFL-C 994 + AV L + I D+Y+ + L G GF + CCG GK + + C Sbjct: 259 LKQAVIELRSSLSEAAITYVDVYSLKHELFVHAQGHGFKGSLVSCCGHGGKYNYNKGIGC 318 Query: 995 NPKSV---------GTCSNASTYVFWDAVHPSEAANQVIADAL 1096 K + C V WD VH ++AAN+ I D + Sbjct: 319 GMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKFIFDKI 361
>Q7Y1X1:EST_HEVBR Esterase precursor - Hevea brasiliensis (Para rubber tree)| Length = 391 Score = 122 bits (305), Expect = 5e-27 Identities = 110/347 (31%), Positives = 157/347 (45%), Gaps = 31/347 (8%) Frame = +2 Query: 149 PGVFTFGDSTVDIGNNDYLHTLIKADFPPYGRDFPNRVATGRFCNGKLATDITADTLGFT 328 P +F FGDS D G + PPYG F +R +TGR+ +G+L D A+ Sbjct: 33 PAIFNFGDSNSDTGGKAAAFYPLN---PPYGETFFHR-STGRYSDGRLIIDFIAE----- 83 Query: 329 SYPPAYLSPQAS--GKNLLIGANFASAGSGYYDHTALM-YHA--IPFSQQLEY--FREY- 484 S+ YLSP S G N GA+FA+AGS T ++ H PF ++Y FR++ Sbjct: 84 SFNLPYLSPYLSSLGSNFKHGADFATAGSTIKLPTTIIPAHGGFSPFYLDVQYSQFRQFI 143 Query: 485 -QSKLSAFAGSSQAKSI-----ISGSLYIVSFGASDFVQNYYINPLLFKTQTVDQFSDRL 646 +S+ G A+ + +LY G +D + + L + V+ L Sbjct: 144 PRSQFIRETGGIFAELVPEEYYFEKALYTFDIGQNDLTEGF----LNLTVEEVNATVPDL 199 Query: 647 VSIFVNSATQLYGMGARRIAVTTLPPLGCLPAAITLFGHG---STGCVSRLNSDSQRFNG 817 V+ F + ++Y +GAR + P+GCL +T F S GC N +Q FN Sbjct: 200 VNSFSANVKKIYDLGARTFWIHNTGPIGCLSFILTYFPWAEKDSAGCAKAYNEVAQHFNH 259 Query: 818 KMSAAVSSLAKRYHDLKIAVF---DIYTPLYSLVTSPGGQGFTEAKRGCCG-TGKVEFTV 985 K+ V+ L K DL +A F DIY+ YSL + P GF CCG GK F+V Sbjct: 260 KLKEIVAQLRK---DLPLATFVHVDIYSVKYSLFSEPEKHGFEFPLITCCGYGGKYNFSV 316 Query: 986 FL-CNPK---------SVGTCSNASTYVFWDAVHPSEAANQVIADAL 1096 C VG+C+ S V WD H +EAAN+ D + Sbjct: 317 TAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQI 363
>Q99289:HLT_VIBPA Thermolabile hemolysin precursor - Vibrio parahaemolyticus| Length = 418 Score = 47.4 bits (111), Expect = 2e-04 Identities = 68/323 (21%), Positives = 120/323 (37%), Gaps = 2/323 (0%) Frame = +2 Query: 155 VFTFGDSTVDIGNNDYLHTLIKADFPPYGRDFPNRVATGRFCNGKLATDITADTLGFTSY 334 V GDS D GN + + FP PN G F NG + T+ A Y Sbjct: 147 VVALGDSLSDTGN---IFNASQWRFPN-----PNSWFLGHFSNGFVWTEYIAKAKNLPLY 198 Query: 335 PPAYLSPQASGKNLLIGANFASAGSGYYDHTALMYHAIPFSQQLEYFREYQSKLSAFAGS 514 A A+G+N I A G G + L Y + + Y+ Sbjct: 199 NWAVGG--AAGENQYI----ALTGVGEQVSSYLTYAKLA--------KNYKP-------- 236 Query: 515 SQAKSIISGSLYIVSFGASDFVQNYYINPLLFKTQTVDQFSDRLVSIFVNSATQLYGMGA 694 + +L+ + FG +DF+ NY ++ + + + + +L GA Sbjct: 237 -------ANTLFTLEFGLNDFM-NY------------NRGVPEVKADYAEALIRLTDAGA 276 Query: 695 RRIAVTTLPPLGCLPAAITLFGHGSTGCVSRLNSDSQRFNGKMSAAVSSLAKRYHDLKIA 874 + + TLP P F + + + ++ + N + A ++ + I Sbjct: 277 KNFMLMTLPDATKAPQ----FKYSTQEEIDKIRAKVLEMNEFIKA--QAMYYKAQGYNIT 330 Query: 875 VFDIYTPLYSLVTSPGGQGFTEAKRGCCGTGKVEFTVFLCNPKSVGTC--SNASTYVFWD 1048 +FD + +L ++P GF A C + ++ C S A +VFWD Sbjct: 331 LFDTHALFETLTSAPEEHGFVNASDPCLDINRSSSVDYMYTHALRSECAASGAEKFVFWD 390 Query: 1049 AVHPSEAANQVIADALLVTGIDL 1117 HP+ A ++ +A+ +L + +L Sbjct: 391 VTHPTTATHRYVAEKMLESSNNL 413
>Q6B6R8:ESTA_PSEPU Esterase estA precursor - Pseudomonas putida| Length = 646 Score = 45.4 bits (106), Expect = 6e-04 Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 4/187 (2%) Frame = +2 Query: 542 SLYIVSFGASDFVQNYYINPLLFKTQTVDQFSDRLVSIFVNSATQLYGMGARRIAVTTLP 721 +LY ++ G +DF+Q +N + Q + RLV +S L GAR I V LP Sbjct: 162 ALYYITGGGNDFLQGRILNDV-----QAQQAAGRLV----DSVQALQQAGARYIVVWLLP 212 Query: 722 PLGCLPAAITLFGHGSTGCVSRLNSDSQRFNGKMSAAVSSLAKRYHDLKIAVFDIYTPLY 901 LG PA FG S+L S FN +++A +S L I + L Sbjct: 213 DLGLTPAT---FGGPLQPFASQL---SGTFNAELTAQLSQAGANVIPLNIPLL-----LK 261 Query: 902 SLVTSPGGQGFTEAKR--GCC--GTGKVEFTVFLCNPKSVGTCSNASTYVFWDAVHPSEA 1069 + +P G + G C G G + N G+ + S +F D+VHP+ Sbjct: 262 EGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGIN----GSTPDPSKLLFNDSVHPTIT 317 Query: 1070 ANQVIAD 1090 ++IAD Sbjct: 318 GQRLIAD 324
>O33407:ESTA_PSEAE Esterase estA precursor - Pseudomonas aeruginosa| Length = 646 Score = 45.4 bits (106), Expect = 6e-04 Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 4/187 (2%) Frame = +2 Query: 542 SLYIVSFGASDFVQNYYINPLLFKTQTVDQFSDRLVSIFVNSATQLYGMGARRIAVTTLP 721 +LY ++ G +DF+Q +N + Q + RLV +S L GAR I V LP Sbjct: 162 ALYYITGGGNDFLQGRILNDV-----QAQQAAGRLV----DSVQALQQAGARYIVVWLLP 212 Query: 722 PLGCLPAAITLFGHGSTGCVSRLNSDSQRFNGKMSAAVSSLAKRYHDLKIAVFDIYTPLY 901 LG PA FG S+L S FN +++A +S L I + L Sbjct: 213 DLGLTPAT---FGGPLQPFASQL---SGTFNAELTAQLSQAGANVIPLNIPLL-----LK 261 Query: 902 SLVTSPGGQGFTEAKR--GCC--GTGKVEFTVFLCNPKSVGTCSNASTYVFWDAVHPSEA 1069 + +P G + G C G G + N G+ + S +F D+VHP+ Sbjct: 262 EGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGIN----GSTPDPSKLLFNDSVHPTIT 317 Query: 1070 ANQVIAD 1090 ++IAD Sbjct: 318 GQRLIAD 324
>P40604:YTRP_PSEPU Uncharacterized protein in trpE-trpG intergenic region precursor -| Pseudomonas putida Length = 592 Score = 41.2 bits (95), Expect = 0.011 Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 4/187 (2%) Frame = +2 Query: 542 SLYIVSFGASDFVQNYYINPLLFKTQTVDQFSDRLVSIFVNSATQLYGMGARRIAVTTLP 721 +LY ++ G +DF+Q +P RL + SA L GAR I V LP Sbjct: 146 ALYYLTGGGNDFLQGLVNSPA-----DAAAAGARLAA----SAQALQQGGARYIMVWLLP 196 Query: 722 PLGCLPAAITLFGHGSTGCVSRLNSDSQRFNGKMSAAVSSLAKRYHDLKIAVFDIYTPLY 901 LG P T + L+ S FN + + + + D +I ++ L Sbjct: 197 DLGQTP------NFSGTPQQTPLSLLSGVFNQSLLSQLGQI-----DAEIIPLNVPMLLS 245 Query: 902 SLVTSPGGQGFTEAKR--GCCGTGK--VEFTVFLCNPKSVGTCSNASTYVFWDAVHPSEA 1069 + SP G + G C +G+ VE V+ N GT + + +F D VHP+ A Sbjct: 246 EALASPSQFGLATGQNLVGTCSSGEGCVENPVYGIN----GTTPDPTKLLFNDLVHPTIA 301 Query: 1070 ANQVIAD 1090 Q+IAD Sbjct: 302 GQQLIAD 308
>P10480:GCAT_AERHY Phosphatidylcholine-sterol acyltransferase precursor - Aeromonas| hydrophila Length = 335 Score = 36.2 bits (82), Expect = 0.37 Identities = 69/356 (19%), Positives = 122/356 (34%), Gaps = 32/356 (8%) Frame = +2 Query: 119 IHGGEAQPLVPGVFTFGDSTVDIGNNDYLHTLIKADFPPYGRDFPNRVATGRFCNGKLAT 298 + +++P + FGDS D G PPY GRF NG Sbjct: 16 VQAADSRPAFSRIVMFGDSLSDTGKMYSKMRGYLPSSPPYYE--------GRFSNG---- 63 Query: 299 DITADTLGFTSYPPAYLSPQASGKNLLIGANFASAGSGYYDHTALMYHAIPFSQQLEYFR 478 P +L + L AN A G TA+ Y+ I ++ + + Sbjct: 64 -------------PVWLEQLTNEFPGLTIANEAEGGP-----TAVAYNKISWNPKYQVIN 105 Query: 479 EYQSKLSAFAGSSQAKSIISGSLYIVSFGASDFVQNYYINPLLFKTQTVDQFSDRLVSIF 658 +++ F Q S L I+ GA+D++ + +Q + R+ Sbjct: 106 NLDYEVTQFL---QKDSFKPDDLVILWVGANDYLAYGW---------NTEQDAKRVRDAI 153 Query: 659 VNSATQLYGMGARRIAVTTLPPLGCLPAAITLFGHGSTGCVSRLNSDSQRFNGKMSAAVS 838 ++A ++ GA+ I + LP LG P+A S V + S N + Sbjct: 154 SDAANRMVLNGAKEILLFNLPDLGQNPSA------RSQKVVEAASHVSAYHNQLLLNLAR 207 Query: 839 SLAKRYHDLKIAVFDIYTPLYSLVTSPGGQGFTEAKRGCCGTGKV-------------EF 979 LA + +F+I ++ P G ++ + C G V + Sbjct: 208 QLAPTG---MVKLFEIDKQFAEMLRDPQNFGLSDTENACYGGSYVWKPFASRSASTDSQL 264 Query: 980 TVF-----------------LCNPKSVGTCS--NASTYVFWDAVHPSEAANQVIAD 1090 + F + +P + + S N +FWD VHP+ + +++ Sbjct: 265 SAFNPQERLAIAGNPLLAQAVASPMAARSASTLNCEGKMFWDQVHPTTVVHAALSE 320
>Q4IL82:INO80_GIBZE Putative DNA helicase INO80 - Gibberella zeae (Fusarium| graminearum) Length = 1904 Score = 35.8 bits (81), Expect = 0.48 Identities = 19/49 (38%), Positives = 22/49 (44%) Frame = +1 Query: 85 PVAPGYPPPDGDSWRGGAAACARGLHVRRLDGRHRQQRLPPHPHQGGLP 231 PVAP PPP G + + A GLH RH Q P H H+ P Sbjct: 135 PVAPALPPPVGINSSSSPGSSAAGLH-----QRHHQPGAPAHQHRAAPP 178
>P30022:UL49_BHV1C Tegument protein UL49 homolog - Bovine herpesvirus 1.1 (strain| Cooper) (BoHV-1) (Infectious bovine rhinotracheitis virus) Length = 258 Score = 33.5 bits (75), Expect = 2.4 Identities = 34/116 (29%), Positives = 42/116 (36%), Gaps = 5/116 (4%) Frame = -1 Query: 1099 EEGVGDHLVGRLRRVDGVPEHVGRRVRARPHRLGVAEEHRELHLPRPAASPLRLREPLT- 923 E G DH+ LR PE GRR R A + R AA+ + P Sbjct: 30 ESGSDDHVYEELRAATSGPEPSGRRASVRACASAAAVQPAARGRDRAAAAGTTVAAPAAA 89 Query: 922 -SRGGDEAVEGRVDVEYGDLEVVVPLRQGAHGGAHLPVEPLGVAV---EPRHAPGA 767 +R R D V+ P +G+ GGA VAV PR PGA Sbjct: 90 PARRSSSRASSRPPRAAADPPVLRPATRGSSGGAG------AVAVGPPRPRAPPGA 139
>Q9R0G8:NRK_MOUSE Nik-related protein kinase - Mus musculus (Mouse)| Length = 1455 Score = 33.1 bits (74), Expect = 3.1 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = -1 Query: 1057 VDGVPEHVGRRVRARPH-RLGVAEEHRELHLPRPAASPLRLREPLTSRGGDEAVE-GRVD 884 +D VPE + RA R G A E +++H P P P REP + +EAVE + + Sbjct: 504 LDQVPEEFQGQDRAPEQPRQGQAAEQQQIHNPVPEQPPEEDREPEQAEVQEEAVEPPQAE 563 Query: 883 VEYGDLEVV 857 +E + EVV Sbjct: 564 IEDKEPEVV 572
>Q9Z2I4:ROBO3_MOUSE Roundabout homolog 3 precursor - Mus musculus (Mouse)| Length = 1366 Score = 32.7 bits (73), Expect = 4.0 Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 6/74 (8%) Frame = -1 Query: 1072 GRLRRVDGV---PEHVGR-RVRARPHRLGVAEEHRELHLPRPAASPLRLREPLT--SRGG 911 GR R+V G P H R R+R +P L EH LP P P LR+ L S G Sbjct: 1229 GRTRQVTGEMTPPLHGHRARIRKKPKALPYRREHSPGDLPPPPLPPPELRDKLALGSAGS 1288 Query: 910 DEAVEGRVDVEYGD 869 + V R ++G+ Sbjct: 1289 RQHVFPRARAQWGE 1302
>O40955:POLN_RUBVR Non-structural polyprotein p200 - Rubella virus (strain vaccine| RA27/3) (RUBV) Length = 2116 Score = 32.3 bits (72), Expect = 5.3 Identities = 41/122 (33%), Positives = 48/122 (39%), Gaps = 14/122 (11%) Frame = -1 Query: 1183 SVRHRHLPTDDVG*PVRGLL------CDEVDAGDE-EGVGDHLVGRLRRVDGVPEHVGRR 1025 S H +D G P+ L+ C V G E E DHL+ L R P V Sbjct: 1201 SASHADASSDGTGDPLDPLMETVGCACSRVWVGSEHEAPPDHLLVSLHRAPNGPWGVVLE 1260 Query: 1024 VRARPHRLGVAEEHRELHL---PRPAAS--PLRLREPLTSRGGDEAV--EGRVDVEYGDL 866 VRARP G H + PR + L L PL+ GG A EG Y DL Sbjct: 1261 VRARPEG-GNPTGHFVCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDL 1319 Query: 865 EV 860 EV Sbjct: 1320 EV 1321
>Q3BN23:COAX_XANC5 Type III pantothenate kinase - Xanthomonas campestris pv. vesicatoria| (strain 85-10) Length = 242 Score = 32.3 bits (72), Expect = 5.3 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%) Frame = -1 Query: 1093 GVGDHLVGRLRRVDGVPEHVGRRVRARPHRLGVAEEHRELHLPRPAASPLRLR----EPL 926 GVG L + DG+ H G R+ A P + A R + LP + L + L Sbjct: 118 GVGTALTIDVLGADGL--HHGGRIAASPTTMREALHARAVQLPASGGDYVELAIDTDDAL 175 Query: 925 TSRGGDEAVEGRVD--VEYGDLEVVVPLRQGAHGGAHLPVEPL 803 TS G D A ++ +++ + VP+R HGG P+ PL Sbjct: 176 TS-GCDGAAVALIERSLQHAQRSLGVPVRLLVHGGGAPPLLPL 217
>Q8PFG5:COAX_XANAC Type III pantothenate kinase - Xanthomonas axonopodis pv. citri| Length = 242 Score = 32.3 bits (72), Expect = 5.3 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%) Frame = -1 Query: 1093 GVGDHLVGRLRRVDGVPEHVGRRVRARPHRLGVAEEHRELHLPRPAASPLRLR----EPL 926 GVG L + DG+ H G R+ A P + A R + LP + L + L Sbjct: 118 GVGTALTIDVLGADGL--HHGGRIAASPTTMREALHARAVQLPASGGDYVELAIDTDDAL 175 Query: 925 TSRGGDEAVEGRVD--VEYGDLEVVVPLRQGAHGGAHLPVEPL 803 TS G D A ++ +++ + VP+R HGG P+ PL Sbjct: 176 TS-GCDGAAVALIERSLQHAQRSLGVPVRLLVHGGGAPPLLPL 217
>P0A5X6:RS3_MYCTU 30S ribosomal protein S3 - Mycobacterium tuberculosis| Length = 274 Score = 32.0 bits (71), Expect = 6.9 Identities = 18/34 (52%), Positives = 18/34 (52%) Frame = +3 Query: 696 GASR*RRCRPWAASPRRSRCSGTGAPGACRGSTA 797 GA R RR RP PRRS SGT A G G A Sbjct: 221 GADRPRRERPSGTRPRRSGASGTTATGTDAGRAA 254
>A1KGI8:RS3_MYCBP 30S ribosomal protein S3 - Mycobacterium bovis (strain BCG / Paris| 1173P2) Length = 274 Score = 32.0 bits (71), Expect = 6.9 Identities = 18/34 (52%), Positives = 18/34 (52%) Frame = +3 Query: 696 GASR*RRCRPWAASPRRSRCSGTGAPGACRGSTA 797 GA R RR RP PRRS SGT A G G A Sbjct: 221 GADRPRRERPSGTRPRRSGASGTTATGTDAGRAA 254
>P0A5X7:RS3_MYCBO 30S ribosomal protein S3 - Mycobacterium bovis| Length = 274 Score = 32.0 bits (71), Expect = 6.9 Identities = 18/34 (52%), Positives = 18/34 (52%) Frame = +3 Query: 696 GASR*RRCRPWAASPRRSRCSGTGAPGACRGSTA 797 GA R RR RP PRRS SGT A G G A Sbjct: 221 GADRPRRERPSGTRPRRSGASGTTATGTDAGRAA 254
>Q9W5E0:SUV42_DROME Histone-lysine N-methyltransferase Suv4-20 - Drosophila melanogaster| (Fruit fly) Length = 1300 Score = 32.0 bits (71), Expect = 6.9 Identities = 33/107 (30%), Positives = 43/107 (40%), Gaps = 3/107 (2%) Frame = +2 Query: 710 TTLPPLGCLPAAITLFGHGSTGCVSRLNSDSQRFNGKMSAA-VSSLAKRYHDLKIAVFDI 886 T PP+ + T + C S NS+S NGK AA S A Y+ L Sbjct: 1152 TVGPPIAAQSPSSTTSSSFQSACTSTTNSNSYFPNGKQRAAGEDSYAMHYYQL------- 1204 Query: 887 YTPLYSLVTSPG-GQGFTEAKRGCCGTGKVEFTVFLCNPK-SVGTCS 1021 ++ SPG GQ + G G G FL PK + GTC+ Sbjct: 1205 --GKFAGTPSPGQGQAIVSSSSGSSGGGG-SGAGFLSMPKHTFGTCA 1248
>Q9CEE3:KGUA_LACLA Guanylate kinase - Lactococcus lactis subsp. lactis (Streptococcus| lactis) Length = 205 Score = 32.0 bits (71), Expect = 6.9 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +2 Query: 569 SDFVQNYYINPLLFKTQTVDQFSDRLVSIFVNSATQLYGMGARRIAVTTLPP 724 +++V NYY PL + QT+D+ D + I V A Q+ + V PP Sbjct: 74 AEYVGNYYGTPLTYVNQTLDEGKDVFLEIEVQGALQVKEKVPDGVFVFLTPP 125
>Q82ZD5:KGUA_ENTFA Guanylate kinase - Enterococcus faecalis (Streptococcus faecalis)| Length = 204 Score = 32.0 bits (71), Expect = 6.9 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +2 Query: 569 SDFVQNYYINPLLFKTQTVDQFSDRLVSIFVNSATQLYGMGARRIAVTTLPP 724 +++V NYY PL + QT+D+ D + I V A Q+ + + PP Sbjct: 75 AEYVGNYYGTPLTYVNQTLDEGKDVFLEIEVQGAKQVKDKVPDGVFIFLTPP 126
>Q73SA8:RS3_MYCPA 30S ribosomal protein S3 - Mycobacterium paratuberculosis| Length = 280 Score = 31.6 bits (70), Expect = 9.0 Identities = 18/34 (52%), Positives = 18/34 (52%) Frame = +3 Query: 696 GASR*RRCRPWAASPRRSRCSGTGAPGACRGSTA 797 GA R RR RP PRRS SGT A G G A Sbjct: 221 GAERPRRERPSGTRPRRSGASGTTATGTEAGRAA 254
>A0QL12:RS3_MYCA1 30S ribosomal protein S3 - Mycobacterium avium (strain 104)| Length = 280 Score = 31.6 bits (70), Expect = 9.0 Identities = 18/34 (52%), Positives = 18/34 (52%) Frame = +3 Query: 696 GASR*RRCRPWAASPRRSRCSGTGAPGACRGSTA 797 GA R RR RP PRRS SGT A G G A Sbjct: 221 GAERPRRERPSGTRPRRSGASGTTATGTEAGRAA 254
>Q99IE5:POLN_RUBVV Non-structural polyprotein p200 - Rubella virus (strain TO-336)| (RUBV) Length = 2116 Score = 31.6 bits (70), Expect = 9.0 Identities = 41/122 (33%), Positives = 47/122 (38%), Gaps = 14/122 (11%) Frame = -1 Query: 1183 SVRHRHLPTDDVG*PVRGLL------CDEVDAGDE-EGVGDHLVGRLRRVDGVPEHVGRR 1025 S H D G P+ L+ C V G E E DHL+ L R P V Sbjct: 1201 SASHADASPDGTGDPLDPLMETVGCACSRVWVGSEHEAPPDHLLVSLHRAPNGPWGVVLE 1260 Query: 1024 VRARPHRLGVAEEHRELHL---PRPAAS--PLRLREPLTSRGGDEAV--EGRVDVEYGDL 866 VRARP G H + PR + L L PL+ GG A EG Y DL Sbjct: 1261 VRARPEG-GNPTGHFVCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDL 1319 Query: 865 EV 860 EV Sbjct: 1320 EV 1321
>P13889:POLN_RUBVT Non-structural polyprotein p200 - Rubella virus (strain Therien)| (RUBV) Length = 2116 Score = 31.6 bits (70), Expect = 9.0 Identities = 41/122 (33%), Positives = 47/122 (38%), Gaps = 14/122 (11%) Frame = -1 Query: 1183 SVRHRHLPTDDVG*PVRGLL------CDEVDAGDE-EGVGDHLVGRLRRVDGVPEHVGRR 1025 S H D G P+ L+ C V G E E DHL+ L R P V Sbjct: 1201 SASHADASPDGTGDPLDPLMETVGCACSRVWVGSEHEAPPDHLLVSLHRAPNGPWGVVLE 1260 Query: 1024 VRARPHRLGVAEEHRELHL---PRPAAS--PLRLREPLTSRGGDEAV--EGRVDVEYGDL 866 VRARP G H + PR + L L PL+ GG A EG Y DL Sbjct: 1261 VRARPEG-GNPTGHFVCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDL 1319 Query: 865 EV 860 EV Sbjct: 1320 EV 1321
>Q99IE7:POLN_RUBVO Non-structural polyprotein p200 - Rubella virus (strain TO-336| vaccine) (RUBV) Length = 2116 Score = 31.6 bits (70), Expect = 9.0 Identities = 41/122 (33%), Positives = 47/122 (38%), Gaps = 14/122 (11%) Frame = -1 Query: 1183 SVRHRHLPTDDVG*PVRGLL------CDEVDAGDE-EGVGDHLVGRLRRVDGVPEHVGRR 1025 S H D G P+ L+ C V G E E DHL+ L R P V Sbjct: 1201 SASHADASPDGTGDPLDPLMETVGCACSRVWVGSEHEAPPDHLLVSLHRAPNGPWGVVLE 1260 Query: 1024 VRARPHRLGVAEEHRELHL---PRPAAS--PLRLREPLTSRGGDEAV--EGRVDVEYGDL 866 VRARP G H + PR + L L PL+ GG A EG Y DL Sbjct: 1261 VRARPEG-GNPTGHFVCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDL 1319 Query: 865 EV 860 EV Sbjct: 1320 EV 1321
>Q86500:POLN_RUBVM Non-structural polyprotein p200 - Rubella virus (strain M33) (RUBV)| Length = 2116 Score = 31.6 bits (70), Expect = 9.0 Identities = 41/122 (33%), Positives = 47/122 (38%), Gaps = 14/122 (11%) Frame = -1 Query: 1183 SVRHRHLPTDDVG*PVRGLL------CDEVDAGDE-EGVGDHLVGRLRRVDGVPEHVGRR 1025 S H D G P+ L+ C V G E E DHL+ L R P V Sbjct: 1201 SASHADASPDGTGDPLDPLMETVGCACSRVWVGSEHEAPPDHLLVSLHRAPNGPWGVVLE 1260 Query: 1024 VRARPHRLGVAEEHRELHL---PRPAAS--PLRLREPLTSRGGDEAV--EGRVDVEYGDL 866 VRARP G H + PR + L L PL+ GG A EG Y DL Sbjct: 1261 VRARPEG-GNPTGHFVCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDL 1319 Query: 865 EV 860 EV Sbjct: 1320 EV 1321
>Q9J6K9:POLN_RUBVD Non-structural polyprotein p200 - Rubella virus (strain Cendehill)| (RUBV) Length = 2116 Score = 31.6 bits (70), Expect = 9.0 Identities = 41/122 (33%), Positives = 47/122 (38%), Gaps = 14/122 (11%) Frame = -1 Query: 1183 SVRHRHLPTDDVG*PVRGLL------CDEVDAGDE-EGVGDHLVGRLRRVDGVPEHVGRR 1025 S H D G P+ L+ C V G E E DHL+ L R P V Sbjct: 1201 SASHADASPDGTGDPLDPLMETVGCACSRVWVGSEQEAPPDHLLVSLHRAPNGPWGVVLE 1260 Query: 1024 VRARPHRLGVAEEHRELHL---PRPAAS--PLRLREPLTSRGGDEAV--EGRVDVEYGDL 866 VRARP G H + PR + L L PL+ GG A EG Y DL Sbjct: 1261 VRARPEG-GNPTGHFVCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDL 1319 Query: 865 EV 860 EV Sbjct: 1320 EV 1321 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 269,720,580 Number of extensions: 6608139 Number of successful extensions: 20743 Number of sequences better than 10.0: 29 Number of HSP's gapped: 20702 Number of HSP's successfully gapped: 29 Length of query: 494 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 377 Effective length of database: 68,593,924 Effective search space: 25859909348 Effective search space used: 25859909348 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
