ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf177e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK072994:Os02g0581700 28 2.4
2AK109915:Os11g0523700 28 3.1
3AK066091:Os03g0200200 28 3.1
4AK107533:Os08g0381000 28 4.1
5AK108657:Os01g0821600 27 5.4
6Os11g0442500:Os11g0442500 27 9.1
7AK069368:Os02g0152300 27 9.1

>AK072994:Os02g0581700 |
          Length = 82
 Score = 28.5 bits (62), Expect = 2.4
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -2

Query: 216 PPRPSSSMDGDTSGCILRPGCSKRGGLPPNTHRWQQTTVGARH 88
           PP      DGD +         + GG+PP T RW + T  A H
Sbjct: 35  PPVKDEDADGDGNP----EASGEGGGVPPVTIRWARITCAASH 73



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>AK109915:Os11g0523700 |
          Length = 334

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 25/92 (27%), Positives = 40/92 (43%)
 Frame = -2

Query: 474 RKLHPSEFISEE*RRIHRFKDQTPQTRSAEGKS*RDDRQ*V*GRTSSDLIRFIYFLLFQH 295
           +K  P++ +  E RR  +  D+    RS   K  + DR  + G    D I ++  LL   
Sbjct: 140 KKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILG----DAIEYLKELL--- 192

Query: 294 NKH*PPGRRINTVQGKL*RQPMAQKTPPRPSS 199
                  ++IN +Q +L   P     PP P+S
Sbjct: 193 -------QKINDLQNELESSPATSSLPPTPTS 217



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>AK066091:Os03g0200200 |
          Length = 215

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = -2

Query: 237 QPMAQKTP---PRPSSSMDGDTSGCILRPGCSKRGGLPPN 127
           +P+A+ +P   P+P S +D    G    P C     LPP+
Sbjct: 154 EPVARASPSAAPKPESDIDDHADGEAAEPDCDLEALLPPH 193



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>AK107533:Os08g0381000 |
          Length = 454

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 109 LLPPMCVRRQAAALGAAWPKDAATGVAVHRGTWPRGRLLGHGLPS 243
           L PP+     +  L   WP+        H  + PR RLL HGLPS
Sbjct: 37  LQPPL-----SPCLCVGWPR--------HHLSRPRSRLLSHGLPS 68



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>AK108657:Os01g0821600 |
          Length = 280

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +1

Query: 91  SCTDRCLLPPMCVRRQAAALGAAW---PKDAATGVAVHR 198
           +C D  L+PP  +   A++  AAW    ++ A+ +AV R
Sbjct: 183 ACRDGELMPPAVINSGASSFAAAWNMASREPASSLAVER 221



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>Os11g0442500:Os11g0442500 |
          Length = 858

 Score = 26.6 bits (57), Expect = 9.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 154 AAWPKDAATGVAVHRGTWPRGRLLGHGLPS 243
           AAWP       A+H G W     LG  +PS
Sbjct: 18  AAWPLPFDAAAALHGGGWDSDPALGELVPS 47



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>AK069368:Os02g0152300 |
          Length = 775

 Score = 26.6 bits (57), Expect = 9.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 237 QPMAQKTPPRPSSSMDGDTSGCILRPGCSKRGGLPPN 127
           +P+  K+ P P   ++G  S   L PGC+    L PN
Sbjct: 236 RPLIAKSEPAPIIHIEGQNSSSALCPGCNP---LSPN 269


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 14,557,950
Number of extensions: 363869
Number of successful extensions: 1070
Number of sequences better than 10.0: 7
Number of HSP's gapped: 1069
Number of HSP's successfully gapped: 7
Length of query: 163
Length of database: 15,399,855
Length adjustment: 93
Effective length of query: 70
Effective length of database: 11,676,042
Effective search space: 817322940
Effective search space used: 817322940
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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