ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf173p20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK102985:Os03g0271800 32 1.8
2AK107980:Os06g0681200 27 2.0
3AK106547:Os08g0101500 32 2.4
4AK103792:Os08g0101500 32 2.4
5Os11g0417200:Os11g0417200 30 7.0
6AK108126:Os03g0742300 30 7.0
7AK071532:Os11g0191800 30 9.1
8AK064746:Os09g0269400 30 9.1
9AK120249:Os03g0705300 30 9.1
10AK109377:Os04g0674000 30 9.1
11AK102312:Os03g0705300 30 9.1
12AK061394:Os05g0326400 30 9.1

>AK102985:Os03g0271800 |
          Length = 142
 Score = 32.3 bits (72), Expect = 1.8
 Identities = 16/38 (42%), Positives = 17/38 (44%)
 Frame = +3

Query: 327 PAC*VSRMMPPSADNHRQTRLCPCPGARVRRRMNPTGG 440
           P+C  S   PP     R  RL PC GA  R R  P  G
Sbjct: 59  PSCRTSGTTPPPRPPRRAARLAPCTGASPRTRPPPRRG 96



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>AK107980:Os06g0681200 |
          Length = 279

 Score = 27.3 bits (59), Expect(2) = 2.0
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +2

Query: 8   IPGPASTFPSLQFGRGRLRCSPSAASLPP*FG*IPATLSPSRSTLTPVGSPATLEPISVP 187
           +P PAS+ PS          +PS  +  P       + SPS S + P  +P T  P S P
Sbjct: 157 MPSPASSPPSPAPAAATPSLAPSPVATTP-------SPSPSVSPMAPAPAPTTSTPSSPP 209



 Score = 23.5 bits (49), Expect(2) = 2.0
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +3

Query: 264 TTESSNDPLALHRMRPFPLSTPAC*VSRMMPPSADNHRQT 383
           TT + + P A   M P P +TP        PP  D    T
Sbjct: 201 TTSTPSSPPAPAAMAPSPSTTPGGVAQPPPPPGTDGANAT 240



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>AK106547:Os08g0101500 |
          Length = 477

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = -2

Query: 315 GRASSYGVQGDRWRTRW*QHLRPQQAKNSGEQGSTHG*SPS-KIGTEMGSRVAGEPTGVK 139
           GR S  G  G RWR RW       +  + G  G+  G  P   +G   G R  G P  V 
Sbjct: 8   GRGSRSGGGGRRWRWRW-------RWADEGRVGAAGGGKPEVPVGVGRGERRHGRPRDVH 60

Query: 138 VERLGLSVAGI*PNHG 91
             R   +VAG  P  G
Sbjct: 61  PHR---AVAGAVPAAG 73



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>AK103792:Os08g0101500 |
          Length = 475

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = -2

Query: 315 GRASSYGVQGDRWRTRW*QHLRPQQAKNSGEQGSTHG*SPS-KIGTEMGSRVAGEPTGVK 139
           GR S  G  G RWR RW       +  + G  G+  G  P   +G   G R  G P  V 
Sbjct: 6   GRGSRSGGGGRRWRWRW-------RWADEGRVGAAGGGKPEVPVGVGRGERRHGRPRDVH 58

Query: 138 VERLGLSVAGI*PNHG 91
             R   +VAG  P  G
Sbjct: 59  PHR---AVAGAVPAAG 71



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>Os11g0417200:Os11g0417200 |
          Length = 278

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
 Frame = +3

Query: 1950 IKPFLWCRID-ARLWQ-LLVLSYKPCYVVSLRR 2042
            I P L C ++ ARLW+ +LV+SY  C V++L R
Sbjct: 41   IGPLLDCEVNRARLWERILVMSYVSCVVIALPR 73



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>AK108126:Os03g0742300 |
          Length = 127

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +3

Query: 222 VRRNSLPAVGGGVVTTESSNDPLALHRMRPFPLSTPAC*VSRMMPPSADNHRQTR 386
           V R +L A GGG V  E+ N  +A+ R+R          + + M P  D H  TR
Sbjct: 20  VARAALKAAGGGDVVDEAENGEVAVQRVRDAAAPYDLVLMDKQM-PVMDGHEATR 73



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>AK071532:Os11g0191800 |
          Length = 229

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
 Frame = -3

Query: 1316 PSTWCAHGNRVTTY*TVFPFRKTCGNTKSKVTH*QDS--VYGRLKRFKSVTLVPTRG*FH 1143
            P  +C+    + +   VFP           VT  QD+  +Y RL R+ S           
Sbjct: 33   PKAFCSKTTDIASCLRVFP------TLPDIVTKAQDNKELYKRLVRYCSFKTYEATSLAE 86

Query: 1142 GLILTTTNLSPRLSSPAWQTW 1080
             +I TTT   P++S+P +  W
Sbjct: 87   SMIATTTAADPKISAPFFPQW 107



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>AK064746:Os09g0269400 |
          Length = 84

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = +3

Query: 9   SLDPHQPFPHSNLDGAGCAAPLRPHHCRR 95
           S  P    P S    AG  APLRPH CRR
Sbjct: 27  SAQPSALPPVSVAPAAGIRAPLRPHRCRR 55



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>AK120249:Os03g0705300 |
          Length = 731

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = -1

Query: 388 RRVWR*LSALGGIILDTQHAGVLRGKGLILWSARGSLEDSVVTTPPPTAGKEFRRTGLYP 209
           R VW    A G   +    AGV+ G+G+++W A GS  D V     P      R TG++ 
Sbjct: 147 RYVW----ANGNQYVGEWRAGVISGRGVLIW-ANGSRYDGVWENGVP------RGTGVFT 195

Query: 208 W 206
           W
Sbjct: 196 W 196



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>AK109377:Os04g0674000 |
          Length = 235

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 21/69 (30%), Positives = 31/69 (44%)
 Frame = +2

Query: 11  PGPASTFPSLQFGRGRLRCSPSAASLPP*FG*IPATLSPSRSTLTPVGSPATLEPISVPI 190
           P P    PSL F + R R S +A  L      + A  S + +  + V     L  I+ P+
Sbjct: 72  PSPPPPLPSLPFDQPRDRVSGAATVLLA----VDAVSSLAAAAASAVLCGDALHQIAFPL 127

Query: 191 LLGD*PWVE 217
           + G+ PW E
Sbjct: 128 VSGEFPWTE 136



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>AK102312:Os03g0705300 |
          Length = 634

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = -1

Query: 388 RRVWR*LSALGGIILDTQHAGVLRGKGLILWSARGSLEDSVVTTPPPTAGKEFRRTGLYP 209
           R VW    A G   +    AGV+ G+G+++W A GS  D V     P      R TG++ 
Sbjct: 50  RYVW----ANGNQYVGEWRAGVISGRGVLIW-ANGSRYDGVWENGVP------RGTGVFT 98

Query: 208 W 206
           W
Sbjct: 99  W 99



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>AK061394:Os05g0326400 |
          Length = 218

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
 Frame = -2

Query: 201 SPSKIGTEMGSRVAGEPTGVKVERLGLSVAGI*PNHGGSDAAEG--------EQRNRPRP 46
           +PS +G   GSR  GEP   +  R   SV G  P   G+ +                   
Sbjct: 47  APSSVGPSTGSR-RGEPWCSRPARTPRSVPGRWPASNGASSLSSITACSSVLTSSTGSAV 105

Query: 45  NWSEGKVDAGPGMA 4
           +WSEG+V AG   A
Sbjct: 106 SWSEGRVQAGDAAA 119


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 90,838,412
Number of extensions: 2297991
Number of successful extensions: 5203
Number of sequences better than 10.0: 12
Number of HSP's gapped: 5201
Number of HSP's successfully gapped: 13
Length of query: 931
Length of database: 15,399,855
Length adjustment: 110
Effective length of query: 821
Effective length of database: 10,995,345
Effective search space: 9027178245
Effective search space used: 9027178245
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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