| Clone Name | FLbaf173p20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK102985:Os03g0271800 | 32 | 1.8 | 2 | AK107980:Os06g0681200 | 27 | 2.0 | 3 | AK106547:Os08g0101500 | 32 | 2.4 | 4 | AK103792:Os08g0101500 | 32 | 2.4 | 5 | Os11g0417200:Os11g0417200 | 30 | 7.0 | 6 | AK108126:Os03g0742300 | 30 | 7.0 | 7 | AK071532:Os11g0191800 | 30 | 9.1 | 8 | AK064746:Os09g0269400 | 30 | 9.1 | 9 | AK120249:Os03g0705300 | 30 | 9.1 | 10 | AK109377:Os04g0674000 | 30 | 9.1 | 11 | AK102312:Os03g0705300 | 30 | 9.1 | 12 | AK061394:Os05g0326400 | 30 | 9.1 |
|---|
>AK102985:Os03g0271800 | Length = 142 Score = 32.3 bits (72), Expect = 1.8 Identities = 16/38 (42%), Positives = 17/38 (44%) Frame = +3 Query: 327 PAC*VSRMMPPSADNHRQTRLCPCPGARVRRRMNPTGG 440 P+C S PP R RL PC GA R R P G Sbjct: 59 PSCRTSGTTPPPRPPRRAARLAPCTGASPRTRPPPRRG 96
>AK107980:Os06g0681200 | Length = 279 Score = 27.3 bits (59), Expect(2) = 2.0 Identities = 19/60 (31%), Positives = 26/60 (43%) Frame = +2 Query: 8 IPGPASTFPSLQFGRGRLRCSPSAASLPP*FG*IPATLSPSRSTLTPVGSPATLEPISVP 187 +P PAS+ PS +PS + P + SPS S + P +P T P S P Sbjct: 157 MPSPASSPPSPAPAAATPSLAPSPVATTP-------SPSPSVSPMAPAPAPTTSTPSSPP 209 Score = 23.5 bits (49), Expect(2) = 2.0 Identities = 13/40 (32%), Positives = 16/40 (40%) Frame = +3 Query: 264 TTESSNDPLALHRMRPFPLSTPAC*VSRMMPPSADNHRQT 383 TT + + P A M P P +TP PP D T Sbjct: 201 TTSTPSSPPAPAAMAPSPSTTPGGVAQPPPPPGTDGANAT 240
>AK106547:Os08g0101500 | Length = 477 Score = 32.0 bits (71), Expect = 2.4 Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Frame = -2 Query: 315 GRASSYGVQGDRWRTRW*QHLRPQQAKNSGEQGSTHG*SPS-KIGTEMGSRVAGEPTGVK 139 GR S G G RWR RW + + G G+ G P +G G R G P V Sbjct: 8 GRGSRSGGGGRRWRWRW-------RWADEGRVGAAGGGKPEVPVGVGRGERRHGRPRDVH 60 Query: 138 VERLGLSVAGI*PNHG 91 R +VAG P G Sbjct: 61 PHR---AVAGAVPAAG 73
>AK103792:Os08g0101500 | Length = 475 Score = 32.0 bits (71), Expect = 2.4 Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Frame = -2 Query: 315 GRASSYGVQGDRWRTRW*QHLRPQQAKNSGEQGSTHG*SPS-KIGTEMGSRVAGEPTGVK 139 GR S G G RWR RW + + G G+ G P +G G R G P V Sbjct: 6 GRGSRSGGGGRRWRWRW-------RWADEGRVGAAGGGKPEVPVGVGRGERRHGRPRDVH 58 Query: 138 VERLGLSVAGI*PNHG 91 R +VAG P G Sbjct: 59 PHR---AVAGAVPAAG 71
>Os11g0417200:Os11g0417200 | Length = 278 Score = 30.4 bits (67), Expect = 7.0 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 2/33 (6%) Frame = +3 Query: 1950 IKPFLWCRID-ARLWQ-LLVLSYKPCYVVSLRR 2042 I P L C ++ ARLW+ +LV+SY C V++L R Sbjct: 41 IGPLLDCEVNRARLWERILVMSYVSCVVIALPR 73
>AK108126:Os03g0742300 | Length = 127 Score = 30.4 bits (67), Expect = 7.0 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = +3 Query: 222 VRRNSLPAVGGGVVTTESSNDPLALHRMRPFPLSTPAC*VSRMMPPSADNHRQTR 386 V R +L A GGG V E+ N +A+ R+R + + M P D H TR Sbjct: 20 VARAALKAAGGGDVVDEAENGEVAVQRVRDAAAPYDLVLMDKQM-PVMDGHEATR 73
>AK071532:Os11g0191800 | Length = 229 Score = 30.0 bits (66), Expect = 9.1 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Frame = -3 Query: 1316 PSTWCAHGNRVTTY*TVFPFRKTCGNTKSKVTH*QDS--VYGRLKRFKSVTLVPTRG*FH 1143 P +C+ + + VFP VT QD+ +Y RL R+ S Sbjct: 33 PKAFCSKTTDIASCLRVFP------TLPDIVTKAQDNKELYKRLVRYCSFKTYEATSLAE 86 Query: 1142 GLILTTTNLSPRLSSPAWQTW 1080 +I TTT P++S+P + W Sbjct: 87 SMIATTTAADPKISAPFFPQW 107
>AK064746:Os09g0269400 | Length = 84 Score = 30.0 bits (66), Expect = 9.1 Identities = 15/29 (51%), Positives = 15/29 (51%) Frame = +3 Query: 9 SLDPHQPFPHSNLDGAGCAAPLRPHHCRR 95 S P P S AG APLRPH CRR Sbjct: 27 SAQPSALPPVSVAPAAGIRAPLRPHRCRR 55
>AK120249:Os03g0705300 | Length = 731 Score = 30.0 bits (66), Expect = 9.1 Identities = 21/61 (34%), Positives = 29/61 (47%) Frame = -1 Query: 388 RRVWR*LSALGGIILDTQHAGVLRGKGLILWSARGSLEDSVVTTPPPTAGKEFRRTGLYP 209 R VW A G + AGV+ G+G+++W A GS D V P R TG++ Sbjct: 147 RYVW----ANGNQYVGEWRAGVISGRGVLIW-ANGSRYDGVWENGVP------RGTGVFT 195 Query: 208 W 206 W Sbjct: 196 W 196
>AK109377:Os04g0674000 | Length = 235 Score = 30.0 bits (66), Expect = 9.1 Identities = 21/69 (30%), Positives = 31/69 (44%) Frame = +2 Query: 11 PGPASTFPSLQFGRGRLRCSPSAASLPP*FG*IPATLSPSRSTLTPVGSPATLEPISVPI 190 P P PSL F + R R S +A L + A S + + + V L I+ P+ Sbjct: 72 PSPPPPLPSLPFDQPRDRVSGAATVLLA----VDAVSSLAAAAASAVLCGDALHQIAFPL 127 Query: 191 LLGD*PWVE 217 + G+ PW E Sbjct: 128 VSGEFPWTE 136
>AK102312:Os03g0705300 | Length = 634 Score = 30.0 bits (66), Expect = 9.1 Identities = 21/61 (34%), Positives = 29/61 (47%) Frame = -1 Query: 388 RRVWR*LSALGGIILDTQHAGVLRGKGLILWSARGSLEDSVVTTPPPTAGKEFRRTGLYP 209 R VW A G + AGV+ G+G+++W A GS D V P R TG++ Sbjct: 50 RYVW----ANGNQYVGEWRAGVISGRGVLIW-ANGSRYDGVWENGVP------RGTGVFT 98 Query: 208 W 206 W Sbjct: 99 W 99
>AK061394:Os05g0326400 | Length = 218 Score = 30.0 bits (66), Expect = 9.1 Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 8/74 (10%) Frame = -2 Query: 201 SPSKIGTEMGSRVAGEPTGVKVERLGLSVAGI*PNHGGSDAAEG--------EQRNRPRP 46 +PS +G GSR GEP + R SV G P G+ + Sbjct: 47 APSSVGPSTGSR-RGEPWCSRPARTPRSVPGRWPASNGASSLSSITACSSVLTSSTGSAV 105 Query: 45 NWSEGKVDAGPGMA 4 +WSEG+V AG A Sbjct: 106 SWSEGRVQAGDAAA 119 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 90,838,412 Number of extensions: 2297991 Number of successful extensions: 5203 Number of sequences better than 10.0: 12 Number of HSP's gapped: 5201 Number of HSP's successfully gapped: 13 Length of query: 931 Length of database: 15,399,855 Length adjustment: 110 Effective length of query: 821 Effective length of database: 10,995,345 Effective search space: 9027178245 Effective search space used: 9027178245 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)