ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf173p19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK066474:Os08g0359000 288 1e-82
2AK111708:Os01g0515300 32 0.62
3Os12g0291000:Os12g0291000 30 4.0
4AF318582:Os01g0239000 28 8.9
5AK121019:Os01g0239000 28 8.9
6AK120026:Os07g0573000 28 9.0
7AK107033:Os01g0632700 28 9.0
8AK102919:Os04g0418800 28 9.0
9AK070692:Os01g0632700 28 9.0

>AK066474:Os08g0359000 |
          Length = 271
 Score =  288 bits (736), Expect(2) = 1e-82
 Identities = 146/182 (80%), Positives = 155/182 (85%), Gaps = 1/182 (0%)
 Frame = +3

Query: 222 KAVIPDDEFTLAKXXXXXXXXXXXXXXXXXXXXAYFNLLPGSEWSALMLTYGFPLTIIGM 401
           KAV+PD+EFTLAK                    AYFNLLPGSEWSALMLTYGFPLTIIGM
Sbjct: 75  KAVVPDEEFTLAKVSFGVIGLGVGGTLLSYGFGAYFNLLPGSEWSALMLTYGFPLTIIGM 134

Query: 402 ALKYAELKPVPCITYSDAFALREKCATPILKQVRSDVTRYRYGDEQHLDEALKRIFQYGL 581
           ALKYAELKPVPC TY+DAFALREKCATPIL QVRSDVTRYRYGDEQHLDEALKRIFQYGL
Sbjct: 135 ALKYAELKPVPCTTYADAFALREKCATPILNQVRSDVTRYRYGDEQHLDEALKRIFQYGL 194

Query: 582 GGGIPRRSAPILQKI-QEVTDDGKYCLVLEFEAKSLGLSDFEKRQAKFTSFFGPGIEAKI 758
           GGGIPRRSAPILQ I +EVTDDGKY LVL FEAK+L +SDFEKRQAKFTSFFGPGI+A+I
Sbjct: 195 GGGIPRRSAPILQNIREEVTDDGKYSLVLVFEAKALEISDFEKRQAKFTSFFGPGIKAEI 254

Query: 759 GE 764
           G+
Sbjct: 255 GK 256



 Score = 38.1 bits (87), Expect(2) = 1e-82
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +1

Query: 826 GKGGDDLYEVRLISETT 876
           GKGGDDLYEVRLISETT
Sbjct: 255 GKGGDDLYEVRLISETT 271



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>AK111708:Os01g0515300 |
          Length = 559

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 24/73 (32%), Positives = 31/73 (42%)
 Frame = +3

Query: 345 SEWSALMLTYGFPLTIIGMALKYAELKPVPCITYSDAFALREKCATPILKQVRSDVTRYR 524
           S WSAL  TYG+    I   L Y  L    C  YS    + E         ++S +T  +
Sbjct: 450 SNWSALAGTYGY----IAPELSYTSLVTEKCDVYSFGVVVLEVLMGKHPGDIQSSITTSK 505

Query: 525 YGDEQHLDEALKR 563
           Y D   LDE L +
Sbjct: 506 YDD--FLDEILDK 516



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>Os12g0291000:Os12g0291000 |
          Length = 2065

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
 Frame = +1

Query: 499  SGVMLHAIDMVMSSTSMKR*SGSFNMVWVAAFQDVVHLYYKRFKK*LMM---GNTV*YWN 669
            S V   + D+     S+K  S  F+++ +A   +   +YY  F K LMM    +++  W+
Sbjct: 1424 STVSEFSFDLHYVKKSIKSSSTYFDILGLAVCWENSPVYYCNFPKDLMMAGSNDSIEMWD 1483

Query: 670  LKPNRWGYQILRRGRQNSP-------PFSVLGLRLKSVSC 768
                RW  +++   RQNS         F +  L+   VSC
Sbjct: 1484 ELTRRWN-RVIEIMRQNSVKKMTWNLKFQIQALKYPCVSC 1522



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>AF318582:Os01g0239000 |
          Length = 417

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 104 AAGGGWRRERSKSPE*VCSALQRHVSLPPPHVAA 3
           AAGGG R++ + +   V   +   +  PPPH AA
Sbjct: 178 AAGGGPRKDAAAATAAVAPWVMPTIGFPPPHAAA 211



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>AK121019:Os01g0239000 |
          Length = 539

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 104 AAGGGWRRERSKSPE*VCSALQRHVSLPPPHVAA 3
           AAGGG R++ + +   V   +   +  PPPH AA
Sbjct: 300 AAGGGPRKDAAAATAAVAPWVMPTIGFPPPHAAA 333



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>AK120026:Os07g0573000 |
          Length = 119

 Score = 28.5 bits (62), Expect = 9.0
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -1

Query: 157 SAPMRLVWHGIRKAFLARRREEDGAGSAARARSEFAVHCRDMSLS 23
           SA  +L W  + +  +ARR    G GS  R ++ F+   +  +L+
Sbjct: 66  SARAKLRWKAVAQEIMARRSGGGGGGSGRRRKTAFSYDSKSYALN 110



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>AK107033:Os01g0632700 |
          Length = 186

 Score = 28.5 bits (62), Expect = 9.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 319 PNPYDKREPPIPSPITPKDTLARVNSSSG 233
           P+P D R PP P+P + +  ++  +S+SG
Sbjct: 73  PSPVDPRPPPQPTPSSAQTPISVASSTSG 101



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>AK102919:Os04g0418800 |
          Length = 360

 Score = 28.5 bits (62), Expect = 9.0
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 319 PNPYDKREPPIPSPITPKDT 260
           P PY  +  P PSP TPK T
Sbjct: 312 PTPYKPQPKPTPSPYTPKPT 331



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>AK070692:Os01g0632700 |
          Length = 147

 Score = 28.5 bits (62), Expect = 9.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 319 PNPYDKREPPIPSPITPKDTLARVNSSSG 233
           P+P D R PP P+P + +  ++  +S+SG
Sbjct: 33  PSPVDPRPPPQPTPSSAQTPISVASSTSG 61


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 31,418,649
Number of extensions: 720780
Number of successful extensions: 2461
Number of sequences better than 10.0: 9
Number of HSP's gapped: 2457
Number of HSP's successfully gapped: 10
Length of query: 371
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 269
Effective length of database: 11,315,673
Effective search space: 3043916037
Effective search space used: 3043916037
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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