| Clone Name | FLbaf173p19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066474:Os08g0359000 | 288 | 1e-82 | 2 | AK111708:Os01g0515300 | 32 | 0.62 | 3 | Os12g0291000:Os12g0291000 | 30 | 4.0 | 4 | AF318582:Os01g0239000 | 28 | 8.9 | 5 | AK121019:Os01g0239000 | 28 | 8.9 | 6 | AK120026:Os07g0573000 | 28 | 9.0 | 7 | AK107033:Os01g0632700 | 28 | 9.0 | 8 | AK102919:Os04g0418800 | 28 | 9.0 | 9 | AK070692:Os01g0632700 | 28 | 9.0 |
|---|
>AK066474:Os08g0359000 | Length = 271 Score = 288 bits (736), Expect(2) = 1e-82 Identities = 146/182 (80%), Positives = 155/182 (85%), Gaps = 1/182 (0%) Frame = +3 Query: 222 KAVIPDDEFTLAKXXXXXXXXXXXXXXXXXXXXAYFNLLPGSEWSALMLTYGFPLTIIGM 401 KAV+PD+EFTLAK AYFNLLPGSEWSALMLTYGFPLTIIGM Sbjct: 75 KAVVPDEEFTLAKVSFGVIGLGVGGTLLSYGFGAYFNLLPGSEWSALMLTYGFPLTIIGM 134 Query: 402 ALKYAELKPVPCITYSDAFALREKCATPILKQVRSDVTRYRYGDEQHLDEALKRIFQYGL 581 ALKYAELKPVPC TY+DAFALREKCATPIL QVRSDVTRYRYGDEQHLDEALKRIFQYGL Sbjct: 135 ALKYAELKPVPCTTYADAFALREKCATPILNQVRSDVTRYRYGDEQHLDEALKRIFQYGL 194 Query: 582 GGGIPRRSAPILQKI-QEVTDDGKYCLVLEFEAKSLGLSDFEKRQAKFTSFFGPGIEAKI 758 GGGIPRRSAPILQ I +EVTDDGKY LVL FEAK+L +SDFEKRQAKFTSFFGPGI+A+I Sbjct: 195 GGGIPRRSAPILQNIREEVTDDGKYSLVLVFEAKALEISDFEKRQAKFTSFFGPGIKAEI 254 Query: 759 GE 764 G+ Sbjct: 255 GK 256 Score = 38.1 bits (87), Expect(2) = 1e-82 Identities = 17/17 (100%), Positives = 17/17 (100%) Frame = +1 Query: 826 GKGGDDLYEVRLISETT 876 GKGGDDLYEVRLISETT Sbjct: 255 GKGGDDLYEVRLISETT 271
>AK111708:Os01g0515300 | Length = 559 Score = 32.3 bits (72), Expect = 0.62 Identities = 24/73 (32%), Positives = 31/73 (42%) Frame = +3 Query: 345 SEWSALMLTYGFPLTIIGMALKYAELKPVPCITYSDAFALREKCATPILKQVRSDVTRYR 524 S WSAL TYG+ I L Y L C YS + E ++S +T + Sbjct: 450 SNWSALAGTYGY----IAPELSYTSLVTEKCDVYSFGVVVLEVLMGKHPGDIQSSITTSK 505 Query: 525 YGDEQHLDEALKR 563 Y D LDE L + Sbjct: 506 YDD--FLDEILDK 516
>Os12g0291000:Os12g0291000 | Length = 2065 Score = 29.6 bits (65), Expect = 4.0 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%) Frame = +1 Query: 499 SGVMLHAIDMVMSSTSMKR*SGSFNMVWVAAFQDVVHLYYKRFKK*LMM---GNTV*YWN 669 S V + D+ S+K S F+++ +A + +YY F K LMM +++ W+ Sbjct: 1424 STVSEFSFDLHYVKKSIKSSSTYFDILGLAVCWENSPVYYCNFPKDLMMAGSNDSIEMWD 1483 Query: 670 LKPNRWGYQILRRGRQNSP-------PFSVLGLRLKSVSC 768 RW +++ RQNS F + L+ VSC Sbjct: 1484 ELTRRWN-RVIEIMRQNSVKKMTWNLKFQIQALKYPCVSC 1522
>AF318582:Os01g0239000 | Length = 417 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 104 AAGGGWRRERSKSPE*VCSALQRHVSLPPPHVAA 3 AAGGG R++ + + V + + PPPH AA Sbjct: 178 AAGGGPRKDAAAATAAVAPWVMPTIGFPPPHAAA 211
>AK121019:Os01g0239000 | Length = 539 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 104 AAGGGWRRERSKSPE*VCSALQRHVSLPPPHVAA 3 AAGGG R++ + + V + + PPPH AA Sbjct: 300 AAGGGPRKDAAAATAAVAPWVMPTIGFPPPHAAA 333
>AK120026:Os07g0573000 | Length = 119 Score = 28.5 bits (62), Expect = 9.0 Identities = 13/45 (28%), Positives = 23/45 (51%) Frame = -1 Query: 157 SAPMRLVWHGIRKAFLARRREEDGAGSAARARSEFAVHCRDMSLS 23 SA +L W + + +ARR G GS R ++ F+ + +L+ Sbjct: 66 SARAKLRWKAVAQEIMARRSGGGGGGSGRRRKTAFSYDSKSYALN 110
>AK107033:Os01g0632700 | Length = 186 Score = 28.5 bits (62), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -1 Query: 319 PNPYDKREPPIPSPITPKDTLARVNSSSG 233 P+P D R PP P+P + + ++ +S+SG Sbjct: 73 PSPVDPRPPPQPTPSSAQTPISVASSTSG 101
>AK102919:Os04g0418800 | Length = 360 Score = 28.5 bits (62), Expect = 9.0 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -1 Query: 319 PNPYDKREPPIPSPITPKDT 260 P PY + P PSP TPK T Sbjct: 312 PTPYKPQPKPTPSPYTPKPT 331
>AK070692:Os01g0632700 | Length = 147 Score = 28.5 bits (62), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -1 Query: 319 PNPYDKREPPIPSPITPKDTLARVNSSSG 233 P+P D R PP P+P + + ++ +S+SG Sbjct: 33 PSPVDPRPPPQPTPSSAQTPISVASSTSG 61 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,418,649 Number of extensions: 720780 Number of successful extensions: 2461 Number of sequences better than 10.0: 9 Number of HSP's gapped: 2457 Number of HSP's successfully gapped: 10 Length of query: 371 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 269 Effective length of database: 11,315,673 Effective search space: 3043916037 Effective search space used: 3043916037 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)