ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf173p13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os04g0593500:Os04g0593500 | 150 | 2e-36 | 2 | Os04g0593400:Os04g0593400 | 140 | 1e-33 | 3 | AK110481: | 32 | 0.49 | 4 | AK106244:Os07g0133500 | 28 | 7.1 | 5 | AB110179:Os07g0133500 | 28 | 7.1 | 6 | AK111728:Os06g0300800 | 28 | 9.2 | 7 | AK105726:Os10g0579600 | 28 | 9.2 | 8 | AK104282:Os06g0485100 | 28 | 9.2 | 9 | AK100649:Os06g0300800 | 28 | 9.2 | 10 | AK099267:Os10g0579600 | 28 | 9.2 | 11 | AK099219:Os10g0579600 | 28 | 9.2 | 12 | AK073906:Os06g0485100 | 28 | 9.2 | 13 | AK070527:Os10g0579600 | 28 | 9.2 | 14 | AK068560:Os06g0485100 | 28 | 9.2 |
|---|
>Os04g0593500:Os04g0593500 | Length = 171 Score = 150 bits (378), Expect = 2e-36 Identities = 79/162 (48%), Positives = 106/162 (65%) Frame = +3 Query: 69 GSLWHEFETDLPAADVWEVYGSLALGQLVPQLLPHVLSKXXXXXXXXXXXXXXXXXFPPA 248 GS+ HE ET LPAA+VWEVYG + QL+PQL+P V SK F P Sbjct: 3 GSVCHELETGLPAAEVWEVYGGFLVAQLLPQLVPEVFSKVELVEGDGGVGSVLHVVFAPG 62 Query: 249 GASEEPRSYKEKFNVVDHEKYIKEAEIVEGGFLDLRFRKYLVRFEVVGKEDGRSVIRSTV 428 + E KEKF +D+E YIKEAE++EGGFLD F+KY+VR E++GK + SV+RST+ Sbjct: 63 AHTGE--FMKEKFIKIDNENYIKEAEVIEGGFLDQGFKKYVVRIEIIGKTENSSVLRSTI 120 Query: 429 EYEVDAEHAKNASLVSTEALAAVAEAITKHIKEQKSPKQAKE 554 ++E AE A AS VST LAA AEA+TK+++EQ+S + ++ Sbjct: 121 KFE--AEDASKASSVSTGGLAATAEAVTKYMREQRSSAEPEQ 160
>Os04g0593400:Os04g0593400 | Length = 161 Score = 140 bits (353), Expect = 1e-33 Identities = 71/155 (45%), Positives = 100/155 (64%) Frame = +3 Query: 69 GSLWHEFETDLPAADVWEVYGSLALGQLVPQLLPHVLSKXXXXXXXXXXXXXXXXXFPPA 248 GS HE ETD+PA+++W++YG+L +L+P+LLPH+L+K FPP Sbjct: 3 GSQSHELETDVPASELWKIYGTLRAAELLPELLPHILAKVELVTGDGGVGTIVRLTFPPG 62 Query: 249 GASEEPRSYKEKFNVVDHEKYIKEAEIVEGGFLDLRFRKYLVRFEVVGKEDGRSVIRSTV 428 + SYKEKF VD++ Y+KEAE VEG L L F Y++RFE++ K SVIRST+ Sbjct: 63 IPGLQ--SYKEKFIKVDNKNYVKEAEAVEGDILKLGFLSYMIRFEIIRKGANTSVIRSTI 120 Query: 429 EYEVDAEHAKNASLVSTEALAAVAEAITKHIKEQK 533 EYE+ EH + ++VST +LAA AE ++IK+QK Sbjct: 121 EYEIGDEHPELQAMVSTASLAATAEKFAEYIKKQK 155
>AK110481: | Length = 870 Score = 32.3 bits (72), Expect = 0.49 Identities = 21/65 (32%), Positives = 31/65 (47%) Frame = +3 Query: 276 KEKFNVVDHEKYIKEAEIVEGGFLDLRFRKYLVRFEVVGKEDGRSVIRSTVEYEVDAEHA 455 K+KF + D + E E +G D + + VRF+V +EDG DA+ A Sbjct: 477 KKKFRMGDDADELPEDERFDGDEEDEEYGERRVRFDVDDEEDGMEEETHRPAARADAKKA 536 Query: 456 KNASL 470 K A+L Sbjct: 537 KQAAL 541
>AK106244:Os07g0133500 | Length = 462 Score = 28.5 bits (62), Expect = 7.1 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +2 Query: 236 FPSCRSFRRTKKLQGEVQCGRP*EVHQGGRNSG 334 F SCR F + +QGE +C RP V G +N G Sbjct: 389 FGSCRGFVMSAAVQGEGKCSRP-AVEVGVQNVG 420
>AB110179:Os07g0133500 | Length = 462 Score = 28.5 bits (62), Expect = 7.1 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +2 Query: 236 FPSCRSFRRTKKLQGEVQCGRP*EVHQGGRNSG 334 F SCR F + +QGE +C RP V G +N G Sbjct: 389 FGSCRGFVMSAAVQGEGKCSRP-AVEVGVQNVG 420
>AK111728:Os06g0300800 | Length = 1334 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +3 Query: 420 STVEYEVDAEHAKNASLVSTEALAAVAEAITKHIKEQKSPKQAKE 554 S+ EVDA+H + L AV E H K ++ PK A++ Sbjct: 757 SSQNVEVDAKHVDGRKSERSVELEAVKETQIVHEKRERPPKTAEQ 801
>AK105726:Os10g0579600 | Length = 569 Score = 28.1 bits (61), Expect = 9.2 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 1/116 (0%) Frame = -2 Query: 718 TAVTSVGVGRWASSKFYSAASNLAASHFRWTLR-LSDNVNAHV*YSGTCTRSYEFYSLAC 542 T + +GVGR + + A+ L W LR + D N + + + +F LAC Sbjct: 415 TQLQRMGVGRLLAVPALAVAAVLET----WRLRSVRDGGNLSIAW-----QLPQFVILAC 465 Query: 541 FGLFCSLMCLVMASATAANASVLTREAFFACSASTSYSTVDLITDLPSSFPTTSNR 374 +FC + L + A + AF + S Y L+ + + TTSN+ Sbjct: 466 SDVFCGIAQLEFFYSEAPVSMRSLCSAFSFLALSLGYYVNSLVVSIVAVVTTTSNK 521
>AK104282:Os06g0485100 | Length = 370 Score = 28.1 bits (61), Expect = 9.2 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Frame = +3 Query: 363 KYLVRFEVVGKED----GRSVIRSTVEYEVDAEHAKNASLVSTEALAAVAEAITKHIKEQ 530 ++LVR++ E+ + R +Y + HA A+ ++ EA+ + K EQ Sbjct: 233 RFLVRYDHDHSEEIVPLRKVCRRPETDYRLQILHAARAAGMAKEAVVDLVSHNDKSSAEQ 292 Query: 531 KSPKQAK 551 K PKQ K Sbjct: 293 KPPKQHK 299
>AK100649:Os06g0300800 | Length = 1206 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +3 Query: 420 STVEYEVDAEHAKNASLVSTEALAAVAEAITKHIKEQKSPKQAKE 554 S+ EVDA+H + L AV E H K ++ PK A++ Sbjct: 629 SSQNVEVDAKHVDGRKSERSVELEAVKETQIVHEKRERPPKTAEQ 673
>AK099267:Os10g0579600 | Length = 569 Score = 28.1 bits (61), Expect = 9.2 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 1/116 (0%) Frame = -2 Query: 718 TAVTSVGVGRWASSKFYSAASNLAASHFRWTLR-LSDNVNAHV*YSGTCTRSYEFYSLAC 542 T + +GVGR + + A+ L W LR + D N + + + +F LAC Sbjct: 415 TQLQRMGVGRLLAVPALAVAAVLET----WRLRSVRDGGNLSIAW-----QLPQFVILAC 465 Query: 541 FGLFCSLMCLVMASATAANASVLTREAFFACSASTSYSTVDLITDLPSSFPTTSNR 374 +FC + L + A + AF + S Y L+ + + TTSN+ Sbjct: 466 SDVFCGIAQLEFFYSEAPVSMRSLCSAFSFLALSLGYYVNSLVVSIVAVVTTTSNK 521
>AK099219:Os10g0579600 | Length = 569 Score = 28.1 bits (61), Expect = 9.2 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 1/116 (0%) Frame = -2 Query: 718 TAVTSVGVGRWASSKFYSAASNLAASHFRWTLR-LSDNVNAHV*YSGTCTRSYEFYSLAC 542 T + +GVGR + + A+ L W LR + D N + + + +F LAC Sbjct: 415 TQLQRMGVGRLLAVPALAVAAVLET----WRLRSVRDGGNLSIAW-----QLPQFVILAC 465 Query: 541 FGLFCSLMCLVMASATAANASVLTREAFFACSASTSYSTVDLITDLPSSFPTTSNR 374 +FC + L + A + AF + S Y L+ + + TTSN+ Sbjct: 466 SDVFCGIAQLEFFYSEAPVSMRSLCSAFSFLALSLGYYVNSLVVSIVAVVTTTSNK 521
>AK073906:Os06g0485100 | Length = 370 Score = 28.1 bits (61), Expect = 9.2 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Frame = +3 Query: 363 KYLVRFEVVGKED----GRSVIRSTVEYEVDAEHAKNASLVSTEALAAVAEAITKHIKEQ 530 ++LVR++ E+ + R +Y + HA A+ ++ EA+ + K EQ Sbjct: 233 RFLVRYDHDHSEEIVPLRKVCRRPETDYRLQILHAARAAGMAKEAVVDLVSHNDKSSAEQ 292 Query: 531 KSPKQAK 551 K PKQ K Sbjct: 293 KPPKQHK 299
>AK070527:Os10g0579600 | Length = 569 Score = 28.1 bits (61), Expect = 9.2 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 1/116 (0%) Frame = -2 Query: 718 TAVTSVGVGRWASSKFYSAASNLAASHFRWTLR-LSDNVNAHV*YSGTCTRSYEFYSLAC 542 T + +GVGR + + A+ L W LR + D N + + + +F LAC Sbjct: 415 TQLQRMGVGRLLAVPALAVAAVLET----WRLRSVRDGGNLSIAW-----QLPQFVILAC 465 Query: 541 FGLFCSLMCLVMASATAANASVLTREAFFACSASTSYSTVDLITDLPSSFPTTSNR 374 +FC + L + A + AF + S Y L+ + + TTSN+ Sbjct: 466 SDVFCGIAQLEFFYSEAPVSMRSLCSAFSFLALSLGYYVNSLVVSIVAVVTTTSNK 521
>AK068560:Os06g0485100 | Length = 234 Score = 28.1 bits (61), Expect = 9.2 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Frame = +3 Query: 363 KYLVRFEVVGKED----GRSVIRSTVEYEVDAEHAKNASLVSTEALAAVAEAITKHIKEQ 530 ++LVR++ E+ + R +Y + HA A+ ++ EA+ + K EQ Sbjct: 97 RFLVRYDHDHSEEIVPLRKVCRRPETDYRLQILHAARAAGMAKEAVVDLVSHNDKSSAEQ 156 Query: 531 KSPKQAK 551 K PKQ K Sbjct: 157 KPPKQHK 163 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,400,163 Number of extensions: 530048 Number of successful extensions: 1457 Number of sequences better than 10.0: 14 Number of HSP's gapped: 1454 Number of HSP's successfully gapped: 14 Length of query: 310 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 210 Effective length of database: 11,395,755 Effective search space: 2393108550 Effective search space used: 2393108550 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
