ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf173p13 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os04g50710:12004.t04549:unspliced-genomic pathogenesis-related 10 protein PR10-1, putative| Length = 816 Score = 88.1 bits (186), Expect(3) = 3e-37 Identities = 32/56 (57%), Positives = 46/56 (82%) Frame = +3 / +1 Query: 276 KEKFNVVDHEKYIKEAEIVEGGFLDLRFRKYLVRFEVVGKEDGRSVIRSTVEYEVD 443 KEKF +D+E YIKEAE++EGGFLD F+KY+VR E++GK + SV+RST+++E + Sbjct: 508 KEKFIKIDNENYIKEAEVIEGGFLDQGFKKYVVRIEIIGKTENSSVLRSTIKFEAE 675 Score = 65.2 bits (136), Expect(3) = 3e-37 Identities = 25/39 (64%), Positives = 30/39 (76%) Frame = +3 / +1 Query: 69 GSLWHEFETDLPAADVWEVYGSLALGQLVPQLLPHVLSK 185 GS+ HE ET LPAA+VWEVYG + QL+PQL+P V SK Sbjct: 7 GSVCHELETGLPAAEVWEVYGGFLVAQLLPQLVPEVFSK 123 Score = 45.1 bits (92), Expect(3) = 3e-37 Identities = 19/38 (50%), Positives = 28/38 (73%) Frame = +3 / +1 Query: 441 DAEHAKNASLVSTEALAAVAEAITKHIKEQKSPKQAKE 554 +AE A AS VST LAA AEA+TK+++EQ+S + ++ Sbjct: 667 EAEDASKASSVSTGGLAATAEAVTKYMREQRSSAEPEQ 780 Score = 62.5 bits (130), Expect(3) = 1e-24 Identities = 30/59 (50%), Positives = 39/59 (66%) Frame = -1 / -1 Query: 245 RRESDEQDSADAAVSLHKLDL*EDVREQLGD*LPESEAAIDLPHVGGREVRLELVPEAP 69 R E D QD +A VSL++L+L + R QL + L EAAIDLPH+G E L+LV +AP Sbjct: 183 RSEDDMQDRPNATVSLNELNLGKYFRNQLREQLRNKEAAIDLPHLGSGEPSLQLVADAP 7 Score = 56.1 bits (116), Expect(3) = 1e-24 Identities = 30/57 (52%), Positives = 35/57 (61%) Frame = -2 / -2 Query: 448 SASTSYSTVDLITDLPSSFPTTSNRTKYFRKRRSKKPPSTISASLMYFSWSTTLNFS 278 ++S S VD T+ S FP S RT YF K S+KPPS SASLM FS S +NFS Sbjct: 680 ASSASNLMVDRSTEEFSVFPMISIRTTYFLKP*SRKPPSITSASLM*FSLSILMNFS 510 Score = 37.3 bits (75), Expect(3) = 1e-24 Identities = 18/32 (56%), Positives = 20/32 (62%) Frame = -2 / -2 Query: 535 LFCSLMCLVMASATAANASVLTREAFFACSAS 440 L CSL+ V ASA AA VLT +A A SAS Sbjct: 761 LLCSLIYFVTASAVAAKPPVLTEDALLASSAS 666 Score = 52.8 bits (109), Expect(2) = 7e-15 Identities = 26/54 (48%), Positives = 35/54 (64%) Frame = -1 / -1 Query: 443 INFILDGRSYNGSAIFFSYDLESHQIFPEAEIQKASLHYFCLLDVLLMVDHIEL 282 ++F +GRS FS DL SH IF +A I K + +YFCLLDV+L+V+ EL Sbjct: 675 LSFEFNGRS*YRRVFCFSDDLYSHDIFLKALI*KTTFYYFCLLDVVLIVNLDEL 514 Score = 50.6 bits (104), Expect(2) = 7e-15 Identities = 23/38 (60%), Positives = 27/38 (71%) Frame = -2 / -2 Query: 181 ERTCGSSWGTSCPRARLP*TSHTSAAGRSVSNSCQRLP 68 E T G+S G+SC + P*TSHTSAAG VS+S Q LP Sbjct: 119 ENTSGTS*GSSCATRKPP*TSHTSAAGSPVSSSWQTLP 6 Score = 37.7 bits (76), Expect(2) = 3e-04 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +2 / +3 Query: 455 KECLPCQYRGIGCCC*GHHQAHQGAEEPK 541 K+ + CQ+R C C*G H+ ++G EE + Sbjct: 681 KQGILCQHRWFSCYC*GRHEVYEGTEEQR 767 Score = 26.7 bits (52), Expect(2) = 3e-04 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +1 / +2 Query: 322 QK*WREAFWISASGNIWCDSRS*EKKMADPL*DRPSSMKL 441 QK* + F I A N+ C+ RS EK+ DRP + KL Sbjct: 554 QK**KVVF*IKALRNMSCE*RSSEKQKTLLYYDRPLNSKL 673
>LOC_Os04g50700:12004.t04548:unspliced-genomic major pollen allergen Car b 1 isoforms 1A and 1B, putative,| expressed Length = 1065 Score = 111 bits (237), Expect(2) = 4e-36 Identities = 47/89 (52%), Positives = 64/89 (71%) Frame = +3 / +3 Query: 267 RSYKEKFNVVDHEKYIKEAEIVEGGFLDLRFRKYLVRFEVVGKEDGRSVIRSTVEYEVDA 446 +SYKEKF VD++ Y+KEAE VEG L L F Y++RFE++ K SVIRST+EYE+ Sbjct: 651 QSYKEKFIKVDNKNYVKEAEAVEGDILKLGFLSYMIRFEIIRKGANTSVIRSTIEYEIGD 830 Query: 447 EHAKNASLVSTEALAAVAEAITKHIKEQK 533 EH + ++VST +LAA AE ++IK+QK Sbjct: 831 EHPELQAMVSTASLAATAEKFAEYIKKQK 917 Score = 63.8 bits (133), Expect(2) = 4e-36 Identities = 21/39 (53%), Positives = 33/39 (84%) Frame = +3 / +2 Query: 69 GSLWHEFETDLPAADVWEVYGSLALGQLVPQLLPHVLSK 185 GS HE ETD+PA+++W++YG+L +L+P+LLPH+L+K Sbjct: 59 GSQSHELETDVPASELWKIYGTLRAAELLPELLPHILAK 175 Score = 81.3 bits (171), Expect(2) = 8e-27 Identities = 44/88 (50%), Positives = 52/88 (59%) Frame = -2 / -3 Query: 532 FCSLMCLVMASATAANASVLTREAFFACSASTSYSTVDLITDLPSSFPTTSNRTKYFRKR 353 FC L+ SA AAN +VLT CS+ SYS VDLIT++ + F SNR Y RK Sbjct: 916 FCFLIYSANFSAVAANDAVLTMAWSSGCSSPISYSIVDLITEVLAPFRMISNRIMYERKP 737 Query: 352 RSKKPPSTISASLMYFSWSTTLNFSL*L 269 + PST SASL F ST +NFSL*L Sbjct: 736 SFRMSPSTASASLT*FLLSTLMNFSL*L 653 Score = 62.9 bits (131), Expect(2) = 8e-27 Identities = 30/54 (55%), Positives = 38/54 (70%) Frame = -1 / -3 Query: 242 RESDEQDSADAAVSLHKLDL*EDVREQLGD*LPESEAAIDLPHVGGREVRLELV 81 R+S D ADAAV+ +LDL EDV EQLG L +E A+DLP +G R+V L+LV Sbjct: 232 RKSQSHDGADAAVAGDELDLGEDVGEQLGQQLGGAERAVDLPQLGRRDVGLQLV 71 Score = 64.8 bits (135), Expect(2) = 4e-13 Identities = 35/77 (45%), Positives = 45/77 (58%) Frame = -1 / -2 Query: 500 SNSSQCLCTDKGGILCMLGINFILDGRSYNGSAIFFSYDLESHQIFPEAEIQKASLHYFC 321 S SQ T+ G L ML + ILD RSYN S F DLE + EA++Q + H C Sbjct: 884 SGRSQ*CGTNHGLELWMLITDLILDSRSYNRSVGPFPNDLEPDHVREEAQLQDVAFHRLC 705 Query: 320 LLDVLLMVDHIELLLVA 270 LL+V+L+V+ E LLVA Sbjct: 704 LLNVILVVNFDEFLLVA 654 Score = 33.1 bits (66), Expect(2) = 4e-13 Identities = 18/37 (48%), Positives = 22/37 (59%) Frame = -2 / -1 Query: 178 RTCGSSWGTSCPRARLP*TSHTSAAGRSVSNSCQRLP 68 R GSS G+S +P* H+S AG SVS+S LP Sbjct: 168 RMWGSSSGSSSAARSVP*IFHSSDAGTSVSSSWLWLP 58 Score = 32.2 bits (64), Expect = 5.5 Identities = 21/56 (37%), Positives = 26/56 (46%) Frame = +1 / +1 Query: 322 QK*WREAFWISASGNIWCDSRS*EKKMADPL*DRPSSMKLMPSMQRMPPLSVQRHW 489 Q+ W+ AS SRS K L*DR SSM+ + S+Q P V HW Sbjct: 706 QRRWKATS*SWASSRT*SGSRSFGKGPTLRL*DRLSSMRSVMSIQSSKPWLVPHHW 873
>LOC_Os09g35910:12009.t03069:unspliced-genomic homeodomain-leucine zipper transcription factor TaHDZipI-1,| putative, expressed Length = 1529 Score = 38.2 bits (77), Expect = 0.088 Identities = 18/39 (46%), Positives = 22/39 (56%) Frame = -2 / +1 Query: 178 RTCGSSWGTSCPRARLP*TSHTSAAGRSVSNSCQRLPPS 62 R+C S ++C AR P S TSA G S S+S PPS Sbjct: 478 RSCSSPGSSACSLARSPSGSRTSARGGSPSSSSASTPPS 594
>LOC_Os01g08130:12001.t00691:unspliced-genomic signal transducer, putative, expressed| Length = 1006 Score = 33.1 bits (66), Expect(2) = 0.11 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 / +3 Query: 148 CPRARLP*TSHTSAAGRSVSNSCQRLPPSIA 56 CPR R P T+ ++A S S R PPSI+ Sbjct: 909 CPRTRAPPTTRSTAPSIPTSRSPTRTPPSIS 1001 Score = 25.4 bits (49), Expect(2) = 0.11 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -2 / +3 Query: 169 GSSWGTSCPRARL 131 GSSW S PR+RL Sbjct: 459 GSSWSPSSPRSRL 497
>LOC_Os08g38310:12008.t03567:unspliced-genomic expressed protein| Length = 6713 Score = 37.3 bits (75), Expect = 0.17 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -2 / -3 Query: 532 FCSLMCLVMASATAANASVLTREAFFACSASTSYSTVDLITDLPSSFPTTS 380 FCSL C ++ +++A A ++R F CS + S L S F TTS Sbjct: 4461 FCSLSCFTLSRSSSAAALRISRSFCFFCSRRFTASATSSAFTLTSLFTTTS 4309
>LOC_Os10g34390:12010.t02737:unspliced-genomic expressed protein| Length = 7129 Score = 29.9 bits (59), Expect(2) = 0.34 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -2 / -1 Query: 553 SLACFGLFCSLMCLVMASATAANASVLTREAFFACSASTSYS 428 SL F + L ++ ++ S LT EAF CS+STS S Sbjct: 3745 SLLILQKFLGALLLCTSTEISSCRSRLTSEAFVLCSSSTSVS 3620 Score = 29.5 bits (58), Expect(2) = 0.34 Identities = 10/29 (34%), Positives = 20/29 (68%) Frame = -2 / -2 Query: 454 ACSASTSYSTVDLITDLPSSFPTTSNRTK 368 +CS++ + S++ I+DL S +PT ++ K Sbjct: 984 SCSSAATKSSISAISDLDSPYPTDYHKQK 898
>LOC_Os08g38820:12008.t03616:unspliced-genomic transmembrane 9 superfamily protein member 2 precursor, putative,| expressed Length = 4488 Score = 35.9 bits (72), Expect = 0.43 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = -2 / -2 Query: 340 PPSTISASLMYFSWSTTLNFSL*LLGSSEAPAG 242 P IS L +SW+ TLNF ++ SSE PAG Sbjct: 2609 PVPMISTFLPSYSWTNTLNFKWLMM*SSEIPAG 2511
>LOC_Os08g17784:12008.t01649:unspliced-genomic purple acid phosphatase, putative, expressed| Length = 9713 Score = 34.5 bits (69), Expect(2) = 0.59 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -2 / -3 Query: 178 RTCGSSWGTSCPRARLP*TSHTSAAGRSVSNSCQRLP 68 R CG+ W SC R R P T R ++SC+ P Sbjct: 894 RWCGTGWRRSCRRPRPPATGRCGRGVRRWTSSCRSAP 784 Score = 24.4 bits (47), Expect(2) = 0.59 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = -1 / -2 Query: 296 DHIELLLVASWFFGSSC 246 +H + ++ W FGSSC Sbjct: 3538 EHTQYNILVRWCFGSSC 3488
>LOC_Os03g48180:12003.t04177:unspliced-genomic peptide transporter PTR2, putative, expressed| Length = 5308 Score = 34.5 bits (69), Expect = 1.1 Identities = 21/48 (43%), Positives = 24/48 (50%) Frame = -2 / +1 Query: 175 TCGSSWGTSCPRARLP*TSHTSAAGRSVSNSCQRLPPSIALSRCWSPR 32 + G S S PR+ S +S A S S S R PPS A SRC PR Sbjct: 3868 SAGPSASASPPRSCSSPASSSSWAPGSTSASPPRAPPSPASSRCSPPR 4011
>LOC_Os01g18810:12001.t01672:unspliced-genomic hypothetical protein| Length = 2151 Score = 34.5 bits (69), Expect = 1.1 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = +2 / +1 Query: 443 CRACKECLPCQYRGIGCCC 499 CR C CL +YR CCC Sbjct: 1240 CRLCSSCLLLEYRSFYCCC 1296
>LOC_Os09g34920:12009.t03019:unspliced-genomic alpha-L-fucosidase 1 precursor, putative, expressed| Length = 1963 Score = 30.9 bits (61), Expect(2) = 1.2 Identities = 10/37 (27%), Positives = 16/37 (43%) Frame = +2 / +1 Query: 443 CRACKECLPCQYRGIGCCC*GHHQAHQGAEEPKASQG 553 CR+C ++ CCC* + + + P S G Sbjct: 1093 CRSCSRYTTTRWAATACCC*TRRRTPRASSTPPTSPG 1203 Score = 24.9 bits (48), Expect(2) = 1.2 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +3 / +3 Query: 69 GSLWHEFETDLPAADVWEVY 128 G WH+ ET P ++ EVY Sbjct: 1056 GWFWHKNETAKPLPELLEVY 1115
>LOC_Os09g32080:12009.t02825:unspliced-genomic endochitinase A2 precursor, putative, expressed| Length = 1993 Score = 34.1 bits (68), Expect = 1.5 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -2 / -1 Query: 178 RTCGSSWGTSCPRARLP*TSHTSAAGRSVSNSCQRLPPS 62 R C S W +SCPR R T+ +S++ S + S P S Sbjct: 1240 RACRSWWASSCPRTRRAPTAASSSSASSTATSPP*TPSS 1124
>LOC_Os12g43390:12012.t04008:unspliced-genomic thaumatin-like protein precursor, putative| Length = 525 Score = 29.0 bits (57), Expect(2) = 2.1 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = -2 / +2 Query: 175 TCGSSWGTSCPRARLP*TSHTSAAGRSVSNSCQRLPPSIALSRCWSP 35 T G+ ++CPR P A S + + PP+ A +RC +P Sbjct: 152 TRGTRGPSTCPRGPAPAGCGAGPAAASTAPAPAAAPPATAPARCRAP 292 Score = 24.0 bits (46), Expect(2) = 2.1 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 / +2 Query: 451 CSASTSYSTVDLITDLPSSFPTTSNRTKYFRKRR 350 CS+S+S+S L T S PT++ R+RR Sbjct: 29 CSSSSSWSPPGLRTRPSSPSPTSARTRCGRRRRR 130
>LOC_Os12g41700:12012.t03846:unspliced-genomic 18S subunit ribosomal protein, putative, expressed| Length = 3598 Score = 33.6 bits (67), Expect = 2.1 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 / -3 Query: 723 FFSFLCSCLWNKCLYALDHSFYSLVINPCI 812 FF C+C +C YAL SF L+ N C+ Sbjct: 3305 FF*LDCNCAHCECPYALQGSFQQLITNICV 3216
>LOC_Os03g10440:12003.t00846:unspliced-genomic 1,4-beta-xylanase, putative, expressed| Length = 3867 Score = 33.6 bits (67), Expect = 2.1 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = -3 / +2 Query: 483 PLY*QGRHSLHARHQLHTRRSIL*RICHLLFLRPRIAPNISGSGDP 346 PL+ G+H LHAR H R R+ H R R + GDP Sbjct: 2981 PLHRAGQHPLHARRPGHPRAGRRPRVAHRGRRRRRRVAGVLPGGDP 3118
>LOC_Os09g23084:12009.t01992:unspliced-genomic endoglucanase 1 precursor, putative, expressed| Length = 9170 Score = 33.1 bits (66), Expect = 2.9 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = -2 / -2 Query: 178 RTCGSSWGTSCPRARLP*TSHTSAAGRSVSNSCQRLPPS 62 R G + G CPR R TS A S S C+R PP+ Sbjct: 1081 RRRGPTPGCPCPRGRPASTSSCPPAAASSSGPCRRRPPA 965
>LOC_Os07g31430:12007.t02831:unspliced-genomic PHI-1, putative, expressed| Length = 1583 Score = 33.1 bits (66), Expect = 2.9 Identities = 16/50 (32%), Positives = 20/50 (40%) Frame = -2 / +2 Query: 175 TCGSSWGTSCPRARLP*TSHTSAAGRSVSNSCQRLPPSIALSRCWSPRSC 26 TC ++W SC R TS +A GR C + R PR C Sbjct: 131 TCSTTWAPSCRGRRRTSTSSGTAGGRPRRRRCSETSSPRSRPRRRRPRRC 280
>LOC_Os07g24810:12007.t02177:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4770 Score = 33.1 bits (66), Expect = 2.9 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2 / -1 Query: 788 LTSHQPVHLHGLTNI 832 +TSHQPVHLHGL + Sbjct: 615 ITSHQPVHLHGLEKL 571
>LOC_Os02g37590:12002.t03397:unspliced-genomic glycerophosphoryl diester phosphodiesterase family protein, putative,| expressed Length = 4986 Score = 33.1 bits (66), Expect = 2.9 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = +2 / +3 Query: 443 CRACKECLPCQYRGIGCCC*GHHQAHQGAEE 535 C+ C LPC+Y+ + CC H H E+ Sbjct: 3966 CQRCCTFLPCRYQEVC*CCFSPHNVHLPGEQ 4058
>LOC_Os02g22020:12002.t01990:unspliced-genomic DNA binding protein, putative, expressed| Length = 2136 Score = 33.1 bits (66), Expect = 2.9 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 / -3 Query: 24 SQLLGLQQRERAMEGGSLWHEFETDLPAADVWEVYGSLALGQ 149 S+ LGL + GG W + LPAA +W + S+A Q Sbjct: 604 SERLGLSGMNSSSTGGGPWSLTVSSLPAASIWLLIPSIAAPQ 479
>LOC_Os01g36920:12001.t03241:unspliced-genomic spliceosome RNA helicase BAT1, putative, expressed| Length = 5269 Score = 27.2 bits (53), Expect(2) = 3.7 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -2 / +1 Query: 589 YSGTCTRSYEFYSLACFGLFCSLMCL 512 +S T T SY+F L C L C CL Sbjct: 4828 FSCTNTVSYDFKELICCILICVSQCL 4905 Score = 22.6 bits (43), Expect(2) = 3.7 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -1 / +1 Query: 491 SQCLCTDKGGILCMLGIN 438 SQCL D GG+L L N Sbjct: 4894 SQCLRKDPGGLLKSLHSN 4947
>LOC_Os12g34360:12012.t03125:unspliced-genomic expressed protein| Length = 2683 Score = 32.7 bits (65), Expect = 4.0 Identities = 18/43 (41%), Positives = 21/43 (48%) Frame = -2 / +2 Query: 166 SSWGTSCPRARLP*TSHTSAAGRSVSNSCQRLPPSIALSRCWS 38 SS SC A P S +GRS S+S R P S A + WS Sbjct: 344 SSGPPSCSSAASPSRSGGWTSGRSPSSSSSRAPASSAAATSWS 472
>LOC_Os05g28980:12005.t02547:unspliced-genomic fiber protein Fb2, putative, expressed| Length = 6793 Score = 32.7 bits (65), Expect = 4.0 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -2 / +3 Query: 73 LPPSIALSRCWSPRSCDVMRG 11 L PS+ L CW CD+MRG Sbjct: 1845 LDPSVDLPSCWIAMGCDLMRG 1907
>LOC_Os04g07110:12004.t00586:unspliced-genomic expressed protein| Length = 2340 Score = 32.7 bits (65), Expect = 4.0 Identities = 21/66 (31%), Positives = 31/66 (46%) Frame = -2 / +3 Query: 505 ASATAANASVLTREAFFACSASTSYSTVDLITDLPSSFPTTSNRTKYFRKRRSKKPPSTI 326 A++ A+A T+ + S TS S TDL P T R + +RRS + P+T Sbjct: 1548 ATSPPASARSSTKASSPGTSPRTSTSPSAAATDLLQPTPATGRRRRGSSRRRSARCPTT* 1727 Query: 325 SASLMY 308 +S Y Sbjct: 1728 CSSSPY 1745
>LOC_Os01g70190:12001.t06320:unspliced-genomic secondary cell wall-related glycosyltransferase family 47,| putative, expressed Length = 3481 Score = 30.9 bits (61), Expect(2) = 4.7 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +1 / -2 Query: 562 HKNACMYLNIIHEH*HCPKAEVST*SDWQPSLKPQSK 672 H+NA + +H H HC K S + QPS K + K Sbjct: 441 HQNAAATTDQMHRHKHCEKHASSNGASNQPSPKKRRK 331 Score = 23.5 bits (45), Expect(2) = 4.7 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = +2 / -3 Query: 35 WTPAARESNGR 67 WT AR SNGR Sbjct: 1922 WTSVARRSNGR 1890
>LOC_Os12g19790:12012.t01822:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3793 Score = 32.2 bits (64), Expect = 5.5 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -2 / +2 Query: 97 SVSNSCQRLPPSIALSRCWSPRSC 26 SVS SCQR + + SRCW C Sbjct: 1070 SVSTSCQRTSLTSSTSRCWHQHRC 1141
>LOC_Os10g17489:12010.t01306:unspliced-genomic cytokinin-O-glucosyltransferase 2, putative, expressed| Length = 12458 Score = 32.2 bits (64), Expect = 5.5 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 / +3 Query: 699 PTEVTAVHFFSFLCSCLWNKCLY 767 P+ V A+ S +C C+W KC+Y Sbjct: 12321 PSNVRAICSKSNMCKCVWYKCIY 12389
>LOC_Os08g07970:12008.t00685:unspliced-genomic transcription factor TGA4, putative, expressed| Length = 9095 Score = 32.2 bits (64), Expect = 5.5 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = -2 / +1 Query: 391 PTTSNRTKYFRKRRSKKPPSTISASLMYFSW 299 P T R + R+RRS++PP ++A + W Sbjct: 8317 PATPRRRRRRRRRRSRRPPPPVTADATWRRW 8409
>LOC_Os05g26810:12005.t02336:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6620 Score = 32.2 bits (64), Expect = 5.5 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -2 / +2 Query: 118 HTSAAGRSVSNSCQRLPPSIALSRCWSPRSC 26 HT A+G VS C R+PP + R R C Sbjct: 4736 HTPASGSRVSLDCDRVPP*VQSPRAICTRGC 4828
>LOC_Os02g05710:12002.t00469:unspliced-genomic expressed protein| Length = 3514 Score = 25.4 bits (49), Expect(2) = 6.8 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -1 / +1 Query: 713 SHFSWSWTLGFF*ILLCGF 657 S FS+SW L F LCGF Sbjct: 511 SFFSFSWLLF*FDDFLCGF 567 Score = 23.5 bits (45), Expect(2) = 6.8 Identities = 8/23 (34%), Positives = 15/23 (65%) Frame = -2 / +3 Query: 553 SLACFGLFCSLMCLVMASATAAN 485 S FGL+CS+ C ++ S +++ Sbjct: 645 SFLFFGLWCSM*CALLQSCLSSS 713
>LOC_Os10g17610:12010.t01318:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5955 Score = 31.8 bits (63), Expect = 7.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -2 / +3 Query: 409 DLPSSFPTTSNRTKYFRKRRSKKPPSTISASLMY 308 D PS +P+TS ++ R+ S PST+ SL + Sbjct: 2382 DHPSHYPSTSIAPRFRRRSSSSSWPSTVDGSLRH 2483
>LOC_Os09g07780:12009.t00574:unspliced-genomic pentatricopeptide repeat protein PPR986-12, putative, expressed| Length = 3207 Score = 31.8 bits (63), Expect = 7.5 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 / -2 Query: 586 NIIHEH*HCPKAEVST*SDWQPSLKPQSKI 675 N +H+H H P +T*+ W+P+LK S + Sbjct: 1268 NQMHQHQHKPSGC*TT*TRWEPALKTSSAV 1179
>LOC_Os07g44830:12007.t04123:unspliced-genomic expressed protein| Length = 5830 Score = 31.8 bits (63), Expect = 7.5 Identities = 8/18 (44%), Positives = 16/18 (88%) Frame = +3 / +1 Query: 714 AVHFFSFLCSCLWNKCLY 767 ++H+++F+CS L+N CL+ Sbjct: 2752 SIHWYTFMCSSLFNHCLF 2805
>LOC_Os07g41330:12007.t03788:unspliced-genomic mitochondrial import inner membrane translocase subunit Tim17,| putative, expressed Length = 4167 Score = 31.8 bits (63), Expect = 7.5 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -2 / +2 Query: 154 TSCPRARLP*TSHTSAAGRSVSNSCQRLPPSIALSRCWS 38 +SC R R P T + A + S+ C R P A R W+ Sbjct: 344 SSCARRRTPGTPSSPAPPPAASSPCARAPAPPAAPRSWA 460
>LOC_Os06g03560:12006.t00248:unspliced-genomic oligopeptide transporter 9, putative, expressed| Length = 3649 Score = 31.8 bits (63), Expect = 7.5 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -2 / -2 Query: 169 GSSWGTSCPRARLP*TSHTSAAGRSVSNSCQRLPP 65 G SWG R * S + GR SC+R+PP Sbjct: 1665 GQSWGRPSRSRRGR*ASGIGSLGRCSMQSCRRMPP 1561
>LOC_Os05g30070:12005.t02606:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5430 Score = 31.8 bits (63), Expect = 7.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -2 / +1 Query: 409 DLPSSFPTTSNRTKYFRKRRSKKPPSTISASLMY 308 D PS +P+T T+ R+ S PST+ +SL + Sbjct: 1834 DYPSPYPSTDIATRIRRRSSSSSWPSTLDSSLRH 1935
>LOC_Os04g01930:12004.t00090:unspliced-genomic catalytic/ transferase, transferring glycosyl groups, putative| Length = 1583 Score = 31.8 bits (63), Expect = 7.5 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = -2 / +2 Query: 151 SCPRARLP*TSHTSAAGRSVSNSCQRLPPSIALSR 47 SC RAR ++ + AA S S+SC+R P+ A R Sbjct: 530 SCTRARARTSTPSRAASSSSSSSCRRRTPAAASGR 634
>LOC_Os03g49990:12003.t04345:unspliced-genomic DELLA protein SLR1, putative, expressed| Length = 2555 Score = 31.8 bits (63), Expect = 7.5 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -2 / +2 Query: 178 RTCGSSWGTSCPRARLP*TSHTSAAGRSVSNSCQRLP 68 R GS W T C RAR P + TS R S+ R P Sbjct: 950 RRLGSGWCTRCWRARRPCSRRTSRPRRRWSSRSPRWP 1060
>LOC_Os03g19870:12003.t01749:unspliced-genomic XPA-binding protein 1, putative, expressed| Length = 6363 Score = 31.8 bits (63), Expect = 7.5 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = +2 / -3 Query: 791 TSHQPVHLHGL 823 TSHQPVHLHGL Sbjct: 1498 TSHQPVHLHGL 1466
>LOC_Os02g10570:12002.t00905:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2478 Score = 31.8 bits (63), Expect = 7.5 Identities = 24/91 (26%), Positives = 41/91 (45%) Frame = -2 / -2 Query: 532 FCSLMCLVMASATAANASVLTREAFFACSASTSYSTVDLITDLPSSFPTTSNRTKYFRKR 353 F S++C A + NAS T ++ A + S+ S+ S T++ + Sbjct: 2438 FSSILCRKYARDCSINASTSTTTSYAATTESSLLSSTVTAAPSSSISTTSTAASSSLSAT 2259 Query: 352 RSKKPPSTISASLMYFSWSTTLNFSL*LLGS 260 + P S+ISA+ M S S ++ + LGS Sbjct: 2258 VTVAPSSSISATAMAASNSLSVTATAAPLGS 2166 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 353,961,966 Number of extensions: 5694845 Number of successful extensions: 27406 Number of sequences better than 10.0: 40 Length of query: 310 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 261 Effective length of database: 52,856,264 Effective search space: 13795484904 Effective search space used: 13795484904 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
