| Clone Name | FLbaf173l22 |
|---|---|
| Clone Library Name | barley_pub |
>Q2YDC9:PDCD2_BOVIN Programmed cell death protein 2 - Bos taurus (Bovine)| Length = 344 Score = 120 bits (301), Expect = 1e-26 Identities = 75/223 (33%), Positives = 104/223 (46%), Gaps = 1/223 (0%) Frame = +2 Query: 185 AALCHWCGTWKGDKICGSCKKSRYCSEKHQALHWRSGHKIDCLQIINSSEASSSVLPAVG 364 A LC CG G K C C K+ YCS++HQ+L WR GHK C Q N Sbjct: 132 AHLCRVCGC-SGPKRCSRCHKAHYCSKEHQSLDWRLGHKQACAQTDNLDNI--------- 181 Query: 365 KVPARSS-WPEYQIAIXXXXXXXXXXXXXNSSKSLVIQKHGKPDDTMQSWMDQFEADADN 541 VP + +PE++I I + ++ ++ ++S M + E+ D Sbjct: 182 -VPDHNFLFPEFEIVIETEDEIMPEVVERDDESEIIGTMGEAHEEELES-MAKHESKED- 238 Query: 542 RCWAYFQERITRGPKQVLRYCRDPNAKPLWALSAGRPSNADIPKCSYCKGPLCYEFQIMP 721 R + F+ +I+ P+Q+LRY R PLW P DIP C C +EFQ+MP Sbjct: 239 RIFRKFKTKISLEPEQILRYGR--GIAPLWISGENTPKEKDIPDCP-CGAKRLFEFQVMP 295 Query: 722 QLLYYFGVRNEPDSLDWATVVVYTCQGSCDESISYMEEFAWVQ 850 QLL Y S+DW + ++TC SC I Y EEF W Q Sbjct: 296 QLLNYLKADRLGRSVDWGVLAIFTCAESCKLGIGYTEEFVWKQ 338
>P47816:PDCD2_RAT Programmed cell death protein 2 - Rattus norvegicus (Rat)| Length = 287 Score = 114 bits (286), Expect = 7e-25 Identities = 71/222 (31%), Positives = 104/222 (46%) Frame = +2 Query: 185 AALCHWCGTWKGDKICGSCKKSRYCSEKHQALHWRSGHKIDCLQIINSSEASSSVLPAVG 364 A LC CG C CK++ YCS++HQ L W+ GHK C Q S+ ++P Sbjct: 75 AHLCRVCGCL-APMTCSRCKQAHYCSKEHQTLDWQLGHKQACTQ----SDHLDHMVPDHN 129 Query: 365 KVPARSSWPEYQIAIXXXXXXXXXXXXXNSSKSLVIQKHGKPDDTMQSWMDQFEADADNR 544 + +PE++I ++ G P++ + S M + E+ D+ Sbjct: 130 LL-----FPEFEIVTETEDEIGPEVVEMEDYSEVIGSMEGVPEEELDS-MAKHESKEDH- 182 Query: 545 CWAYFQERITRGPKQVLRYCRDPNAKPLWALSAGRPSNADIPKCSYCKGPLCYEFQIMPQ 724 + F+ +I P+Q+LRY R KP+W P DIP CS C +EFQ+MPQ Sbjct: 183 IFQKFKSKIALEPEQILRYGR--GIKPIWISGENIPQEKDIPDCS-CGVKRIFEFQVMPQ 239 Query: 725 LLYYFGVRNEPDSLDWATVVVYTCQGSCDESISYMEEFAWVQ 850 LL + S+DW + V+TC SC I + EEF W Q Sbjct: 240 LLNHLKADRLGTSVDWGILAVFTCAESCSLGIGFTEEFVWKQ 281
>P46718:PDCD2_MOUSE Programmed cell death protein 2 - Mus musculus (Mouse)| Length = 343 Score = 112 bits (281), Expect = 3e-24 Identities = 71/222 (31%), Positives = 101/222 (45%) Frame = +2 Query: 185 AALCHWCGTWKGDKICGSCKKSRYCSEKHQALHWRSGHKIDCLQIINSSEASSSVLPAVG 364 A LC CG C CK++ YCS++HQ L WR GHK C Q S+ ++P Sbjct: 131 AHLCRVCGCL-APMTCSRCKQAHYCSKEHQTLDWRLGHKQACTQ----SDKIDHMVPDHN 185 Query: 365 KVPARSSWPEYQIAIXXXXXXXXXXXXXNSSKSLVIQKHGKPDDTMQSWMDQFEADADNR 544 + +PE++I + G P++ + S M + E+ D+ Sbjct: 186 FL-----FPEFEIVTETEDEILPEVVEMEDYSEVTGSMGGIPEEELDS-MAKHESKEDH- 238 Query: 545 CWAYFQERITRGPKQVLRYCRDPNAKPLWALSAGRPSNADIPKCSYCKGPLCYEFQIMPQ 724 + F+ +I P+Q+LRY R KP+W P DIP C C +EFQ+MPQ Sbjct: 239 IFQKFKSKIALEPEQILRYGR--GIKPIWISGENIPQEKDIPDCP-CGAKRIFEFQVMPQ 295 Query: 725 LLYYFGVRNEPDSLDWATVVVYTCQGSCDESISYMEEFAWVQ 850 LL + S+DW + V+TC SC Y EEF W Q Sbjct: 296 LLNHLKADRLGRSIDWGVLAVFTCAESCSLGSGYTEEFVWKQ 337
>Q16342:PDCD2_HUMAN Programmed cell death protein 2 - Homo sapiens (Human)| Length = 344 Score = 110 bits (276), Expect = 1e-23 Identities = 69/224 (30%), Positives = 98/224 (43%), Gaps = 2/224 (0%) Frame = +2 Query: 185 AALCHWCGTWKGDKICGSCKKSRYCSEKHQALHWRSGHKIDCLQIINSSEASSSVLPAVG 364 A LC CG G K C C K+ YCS++HQ L WR GHK C Q + ++P Sbjct: 132 AHLCRVCGCL-GPKTCSRCHKAYYCSKEHQTLDWRLGHKQACAQ----PDHLDHIIPDHN 186 Query: 365 KVPARSSWPEYQIAIXXXXXXXXXXXXXNSSKSLVIQKHGKPDDTMQSWMDQF--EADAD 538 + +PE++I I ++ G + ++ +D + Sbjct: 187 FL-----FPEFEIVIETEDEIMPEVVEKEDYSEII----GSMGEALEEELDSMAKHESRE 237 Query: 539 NRCWAYFQERITRGPKQVLRYCRDPNAKPLWALSAGRPSNADIPKCSYCKGPLCYEFQIM 718 ++ + F+ +I P+Q+LRY R P+W P DIP C C EFQ+M Sbjct: 238 DKIFQKFKTQIALEPEQILRYGR--GIAPIWISGENIPQEKDIPDCP-CGAKRILEFQVM 294 Query: 719 PQLLYYFGVRNEPDSLDWATVVVYTCQGSCDESISYMEEFAWVQ 850 PQLL Y S+DW + V+TC SC Y EEF W Q Sbjct: 295 PQLLNYLKADRLGKSIDWGILAVFTCAESCSLGTGYTEEFVWKQ 338
>Q09787:YA99_SCHPO Uncharacterized protein C13G6.09 - Schizosaccharomyces pombe| (Fission yeast) Length = 274 Score = 58.9 bits (141), Expect = 5e-08 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Frame = +2 Query: 557 FQERITRGPKQVLRYCR-DPNAKP-LWALSAGRPSNADIPKCSYCKGPLCYEFQIMPQLL 730 FQ+R++R P Q++RY N P LW + PS+ IP C+ C EFQI+P L+ Sbjct: 165 FQKRLSRAPDQIMRYYHATSNEFPGLWCNNECIPSS--IPNCA-CGAKRQLEFQILPTLI 221 Query: 731 YYFGV-RNEPDSLDWATVVVYTCQGSCD-ESISYMEEFAWVQLY 856 + + ++LDW + +Y C SCD + EE W+Q + Sbjct: 222 SSMNIDHSAKNALDWGILSIYVCSASCDLANCGLAEELCWLQTF 265
>Q9BRP1:PDD2L_HUMAN Programmed cell death protein 2-like - Homo sapiens (Human)| Length = 358 Score = 58.2 bits (139), Expect = 8e-08 Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Frame = +2 Query: 557 FQERITRGPKQVLRYCRDPNAKPLWALSAGRPSNADIPKCSYCKGPLCYEFQIMPQLLYY 736 F +RI +Q+LRY + +PL+ L+ ++P CS C G +EFQ+MP L+ Sbjct: 253 FMKRIAACQEQILRYSW--SGEPLF-LTCPTSEVTELPACSQCGGQRIFEFQLMPALVSM 309 Query: 737 FGVRNEPDSLDWATVVVYTCQGSC--DESISYMEEFAWVQLYPTSI 868 N S+++ T++VYTC+ SC + MEEF +Q P + Sbjct: 310 LKSANLGLSVEFGTILVYTCEKSCWPPNHQTPMEEFCIIQEDPDEL 355
>Q8C5N5:PDD2L_MOUSE Programmed cell death protein 2-like - Mus musculus (Mouse)| Length = 364 Score = 55.8 bits (133), Expect = 4e-07 Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Frame = +2 Query: 557 FQERITRGPKQVLRYCRDPNAKPLWALSAGRPSNADIPKCSYCKGPLCYEFQIMPQLLYY 736 F +RI +Q+LRY + +PL+ LS +++P CS C G +EFQ+MP L+ Sbjct: 259 FMKRIAACQEQILRYSW--SGEPLF-LSCPTFEVSEVPACSGCGGQRTFEFQLMPALVSM 315 Query: 737 FGVRNEPDSLDWATVVVYTCQGSC--DESISYMEEFAWVQLYP 859 N ++++ T++VYTC+ SC MEEF +Q P Sbjct: 316 LSSANLGLAVEFGTILVYTCKQSCWPPNQQMPMEEFCVLQEDP 358
>Q5ZID2:PDD2L_CHICK Programmed cell death protein 2-like - Gallus gallus (Chicken)| Length = 379 Score = 55.1 bits (131), Expect = 7e-07 Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 3/104 (2%) Frame = +2 Query: 557 FQERITRGPKQVLRYCRDPNAKPLWALSAGRPSNADIPKCSYCKGPLCYEFQIMPQLLYY 736 F +RI+ P+Q+LRY +PL+ + IP CS C +EFQ+MP L+ Sbjct: 274 FMKRISVCPEQILRYSW--GGQPLFITCPPANFDNSIPACSNCGSNRVFEFQLMPALVSM 331 Query: 737 FGVRNEPD-SLDWATVVVYTCQGSC--DESISYMEEFAWVQLYP 859 + + D S+++ TV+VYTC+ SC + +EEF +VQ P Sbjct: 332 --LWGDADLSVEFGTVIVYTCERSCWPTNQQTPLEEFIFVQEDP 373
>P87156:YB0F_SCHPO Uncharacterized protein C25H2.15 - Schizosaccharomyces pombe| (Fission yeast) Length = 396 Score = 50.1 bits (118), Expect = 2e-05 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 20/140 (14%) Frame = +2 Query: 491 DDTMQSW-MDQFEADAD--NRCWAYFQERITRGPKQVLRYCRDPNAKPLWALSAGRPS-- 655 +D+ ++W + +E + + F E+I+ P Q LRY R PL L++GR Sbjct: 263 NDSSEAWEKESYEKSPSVYEKTFRLFSEKISHNPTQCLRYER--GGTPL--LASGRDKLG 318 Query: 656 ----------NADIPKCSYCKGPLCYEFQIMPQLLYYFGVRNEPDSLDWATVVVYTCQGS 805 + +P C CK P +E Q+MP + + N+ + +W+T++V TC Sbjct: 319 QQLKSVTNFGKSPVPLCPLCKSPRLFEMQLMPHAI---SILND-EIAEWSTILVATCSMD 374 Query: 806 CD-----ESISYMEEFAWVQ 850 C+ + + Y E+ +Q Sbjct: 375 CNPPINKDRVGYAVEWVGIQ 394
>P25040:YO022_YEAST Uncharacterized protein YOL022C - Saccharomyces cerevisiae (Baker's| yeast) Length = 408 Score = 38.5 bits (88), Expect = 0.063 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Frame = +2 Query: 536 DNRCWAYFQERITRGPKQVLRYCRDPNAKPLWALSAGRPSNADIPKCSY-CKGPLCYEFQ 712 D+ + FQE + P QVLRY D KPL + +P+ Y +E Q Sbjct: 294 DDDTFQKFQEVVGYNPLQVLRY--DLGGKPLLYAETKVDILSTVPRPGYNPSSQRIFEMQ 351 Query: 713 IMPQLLYYF-GVRNEPDSLDWATVVVYTCQGSCDESISYMEEF 838 +MP++++ V + + ++W T++V+T + +YM EF Sbjct: 352 LMPKMIFDLEEVVSVDNGMEWGTILVFT------DVENYMPEF 388
>Q91YE3:EGLN1_MOUSE Egl nine homolog 1 - Mus musculus (Mouse)| Length = 400 Score = 37.7 bits (86), Expect = 0.11 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +2 Query: 194 CHWCGTWKGDKICGSCKKSRYCSEKHQALHWRSGHKIDC 310 C CG + CG C+ S YC ++HQ W+ HK+ C Sbjct: 21 CELCGKMENLLRCGRCRSSFYCCKEHQRQDWKK-HKLVC 58
>Q09415:YRM4_CAEEL MYND-type zinc finger protein R06F6.4 - Caenorhabditis elegans| Length = 429 Score = 37.4 bits (85), Expect = 0.14 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Frame = +2 Query: 194 CHWCGTWKGD-KICGSCKKSRYCSEKHQALHWRSGHKIDCLQIINSSEASSSVLPAVGKV 370 C+ C T + K C +C++ YCS++ Q W+ HK++C I +E ++ + V ++ Sbjct: 26 CNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVECKAIKTHNEVANDSIRLVMRI 84 Query: 371 PARSS 385 + S Sbjct: 85 AGKLS 89
>Q5ZMD2:ANKY2_CHICK Ankyrin repeat and MYND domain-containing protein 2 - Gallus gallus| (Chicken) Length = 460 Score = 35.8 bits (81), Expect = 0.41 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +2 Query: 185 AALCHWCGTWKGDKICGSCKKSRYCSEKHQALHWRSGHKI 304 A C CG DK C CK YC + Q HW + K+ Sbjct: 317 AEFCTTCGEKGADKRCSVCKVVMYCDQNCQKTHWFTHKKV 356
>Q9GZT9:EGLN1_HUMAN Egl nine homolog 1 - Homo sapiens (Human)| Length = 426 Score = 35.4 bits (80), Expect = 0.54 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +2 Query: 194 CHWCGTWKGDKICGSCKKSRYCSEKHQALHWRSGHKIDC 310 C CG + C C+ S YC ++HQ W+ HK+ C Sbjct: 21 CELCGKMENLLRCSRCRSSFYCCKEHQRQDWKK-HKLVC 58
>Q9FYF9:FB76_ARATH F-box protein At1g67340 - Arabidopsis thaliana (Mouse-ear cress)| Length = 379 Score = 34.3 bits (77), Expect = 1.2 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +2 Query: 230 CGSCKKSRYCSEKHQALHWRSGHKIDCLQI 319 C C YCS QAL W+ HK+DC + Sbjct: 320 CSVCGVVNYCSRACQALDWKLRHKMDCAPV 349
>Q9NRG4:SMYD2_HUMAN SET and MYND domain-containing protein 2 - Homo sapiens (Human)| Length = 433 Score = 33.1 bits (74), Expect = 2.7 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +2 Query: 194 CHWCGTWK-GDKICGSCKKSRYCSEKHQALHWRSGHKIDCLQII 322 C +C T K G CG CK++ YC+ + Q W HK++C ++ Sbjct: 52 CEYCFTRKEGLSKCGRCKQAFYCNVECQKEDWPM-HKLECSPMV 94
>Q0A407:PB1F2_IAGU2 Protein PB1-F2 - Influenza A virus (strain A/Gull/Maryland/704/1977| H13N6) Length = 90 Score = 33.1 bits (74), Expect = 2.7 Identities = 15/58 (25%), Positives = 27/58 (46%) Frame = -3 Query: 1237 IQKTVQGGSYKETDNPNEIKMPTEPAMLATTAISHQMLCRWPQWLNSRPSTSELIGTR 1064 IQK G ++ ++PN ++ + H+ + W QWL+ + T E + TR Sbjct: 18 IQKRENGQQIQKLEHPNLTQLMDHYLRIMNQVDMHKQIASWKQWLSLKNPTQESLKTR 75
>Q8R5C8:ZMY11_MOUSE Zinc finger MYND domain-containing protein 11 - Mus musculus| (Mouse) Length = 562 Score = 32.7 bits (73), Expect = 3.5 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +2 Query: 200 WCGTWKGDKICGSCKKSRYCSEKHQALHWRSGHKIDC 310 WC + + + C + YCS K Q HW + HK C Sbjct: 522 WCYNCEEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTC 558
>Q15326:ZMY11_HUMAN Zinc finger MYND domain-containing protein 11 - Homo sapiens| (Human) Length = 562 Score = 32.7 bits (73), Expect = 3.5 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +2 Query: 200 WCGTWKGDKICGSCKKSRYCSEKHQALHWRSGHKIDC 310 WC + + + C + YCS K Q HW + HK C Sbjct: 522 WCYNCEEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTC 558
>O70374:MTG8R_MOUSE Protein CBFA2T2 - Mus musculus (Mouse)| Length = 574 Score = 32.0 bits (71), Expect = 5.9 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Frame = +2 Query: 155 FLRLLDCELPAALCHWCGTWKGDKICGSCKKSRYCSEKHQALHWRSGHKIDCLQIINSSE 334 FL + + E C CG K + C C +RYC Q W H++ C Q ++ Sbjct: 465 FLVINEQEESTENCWNCGR-KASETCSGCNIARYCGSFCQHKDWERHHRL-CGQSLHGHS 522 Query: 335 ASSSVLPAV--GKVPARSS 385 S P + G+ ARS+ Sbjct: 523 PHSQSRPLLPGGRGSARSA 541
>Q8IV38:ANKY2_HUMAN Ankyrin repeat and MYND domain-containing protein 2 - Homo sapiens| (Human) Length = 441 Score = 32.0 bits (71), Expect = 5.9 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 194 CHWCGTWKGDKICGSCKKSRYCSEKHQALHWRSGHKI 304 C CG K C CK YC + Q HW + KI Sbjct: 320 CTTCGEKGASKRCSVCKMVIYCDQTCQKTHWFTHKKI 356
>Q0VCS9:ANKY2_BOVIN Ankyrin repeat and MYND domain-containing protein 2 - Bos taurus| (Bovine) Length = 442 Score = 32.0 bits (71), Expect = 5.9 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 194 CHWCGTWKGDKICGSCKKSRYCSEKHQALHWRSGHKI 304 C CG K C CK YC + Q HW + KI Sbjct: 320 CTTCGEKGASKRCSVCKMVIYCDQTCQKTHWFAHKKI 356
>Q84TX2:SCRL1_ORYSJ SCAR-like protein 1 - Oryza sativa subsp. japonica (Rice)| Length = 2097 Score = 31.6 bits (70), Expect = 7.7 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = +2 Query: 266 KHQALHWRSGHKIDCLQIINSSEASSSVLPAVGKVPARSSWPEYQ 400 K +AL WR G ++ L I NS ++S + KVP R++ +Y+ Sbjct: 188 KKKALRWRKGETLESLLIANSESHTTSKDRSSRKVPPRTTKLKYR 232
>Q20NN4:PB1F2_IATKM Protein PB1-F2 - Influenza A virus (strain| A/Turkey/Minnesota/833/1980 H4N2) Length = 90 Score = 31.6 bits (70), Expect = 7.7 Identities = 15/58 (25%), Positives = 27/58 (46%) Frame = -3 Query: 1237 IQKTVQGGSYKETDNPNEIKMPTEPAMLATTAISHQMLCRWPQWLNSRPSTSELIGTR 1064 IQK G ++ ++PN ++ + + H+ W QWL+ + T E + TR Sbjct: 18 IQKRGNGQQTQKLEHPNLTQLMDHYLRIMSQVDMHKQTVSWKQWLSLKSPTQESLKTR 75
>O75342:LX12B_HUMAN Arachidonate 12-lipoxygenase, 12R type - Homo sapiens (Human)| Length = 701 Score = 31.6 bits (70), Expect = 7.7 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +2 Query: 743 VRNEPDSLDWATVVVYTCQGS-CDESISYMEEFAWVQLYPTSITRP 877 +R P+ + + T+V+YTC + ME AW+ +P S+ P Sbjct: 557 LRTVPELIRYVTIVIYTCSAKHAAVNTGQMEFTAWMPNFPASMRNP 602 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 229,800,868 Number of extensions: 4931820 Number of successful extensions: 10630 Number of sequences better than 10.0: 25 Number of HSP's gapped: 10612 Number of HSP's successfully gapped: 25 Length of query: 440 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 324 Effective length of database: 68,868,219 Effective search space: 22313302956 Effective search space used: 22313302956 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)