ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf173l20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK104075:Os01g0974200 28 3.5
2AK059392:Os01g0974200 28 3.5
3AF017365:Os01g0974200 28 3.5
4AB002820:Os01g0974200 28 3.5 
>AK104075:Os01g0974200 |
          Length = 93
 Score = 28.1 bits (61), Expect = 3.5
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +2

Query: 239 DGAGERRLRLHPXXXXXXXXXXXXXXXXXXSWIHCLHHIYN-LPIRL 376
           DG GER+LRL                    +++H +HH+ N LP+ L
Sbjct: 27  DGGGERQLRLQHLQVRHQLRLLLLQLQLEETYLHPIHHLINELPVPL 73
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>AK059392:Os01g0974200 |
          Length = 111

 Score = 28.1 bits (61), Expect = 3.5
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +2

Query: 239 DGAGERRLRLHPXXXXXXXXXXXXXXXXXXSWIHCLHHIYN-LPIRL 376
           DG GER+LRL                    +++H +HH+ N LP+ L
Sbjct: 45  DGGGERQLRLQHLQVRHQLRLLLLQLQLEETYLHPIHHLINELPVPL 91
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>AF017365:Os01g0974200 |
          Length = 93

 Score = 28.1 bits (61), Expect = 3.5
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +2

Query: 239 DGAGERRLRLHPXXXXXXXXXXXXXXXXXXSWIHCLHHIYN-LPIRL 376
           DG GER+LRL                    +++H +HH+ N LP+ L
Sbjct: 27  DGGGERQLRLQHLQVRHQLRLLLLQLQLEETYLHPIHHLINELPVPL 73
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>AB002820:Os01g0974200 |
          Length = 93

 Score = 28.1 bits (61), Expect = 3.5
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +2

Query: 239 DGAGERRLRLHPXXXXXXXXXXXXXXXXXXSWIHCLHHIYN-LPIRL 376
           DG GER+LRL                    +++H +HH+ N LP+ L
Sbjct: 27  DGGGERQLRLQHLQVRHQLRLLLLQLQLEETYLHPIHHLINELPVPL 73


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 10,060,500
Number of extensions: 176329
Number of successful extensions: 443
Number of sequences better than 10.0: 4
Number of HSP's gapped: 443
Number of HSP's successfully gapped: 4
Length of query: 174
Length of database: 15,399,855
Length adjustment: 94
Effective length of query: 80
Effective length of database: 11,636,001
Effective search space: 930880080
Effective search space used: 930880080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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