ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf170h08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072980:Os04g0527700 | 137 | 1e-32 | 2 | AK111408:Os11g0111000 | 37 | 0.019 | 3 | AK120767:Os09g0530200 | 33 | 0.36 | 4 | Os02g0770500:Os02g0770500 | 32 | 0.48 | 5 | Os05g0376700:Os05g0376700 | 31 | 1.1 | 6 | AK099035:Os02g0285800 | 30 | 3.1 | 7 | AK072177:Os02g0285800 | 30 | 3.1 | 8 | AK073886:Os01g0814000 | 30 | 3.1 | 9 | Os09g0122000:Os09g0122000 | 29 | 4.0 | 10 | AK106254:Os06g0573700 | 29 | 4.0 | 11 | AK109108:Os05g0120300 | 29 | 5.3 | 12 | AK064808:Os03g0792400 | 29 | 5.3 | 13 | AK110380: | 29 | 5.3 | 14 | AK069906:Os01g0828300 | 29 | 5.3 | 15 | AK068539:Os03g0673600 | 29 | 5.3 | 16 | AK062334:Os03g0673600 | 29 | 5.3 | 17 | AK111967:Os04g0684900 | 28 | 6.9 | 18 | AK105262:Os03g0727900 | 28 | 6.9 | 19 | AK066891:Os05g0429600 | 28 | 6.9 | 20 | Os03g0257600:Os03g0257600 | 28 | 9.0 |
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>AK072980:Os04g0527700 | Length = 151 Score = 137 bits (344), Expect = 1e-32 Identities = 68/99 (68%), Positives = 73/99 (73%) Frame = +2 Query: 323 DESIDVKVQKALDCPCVADLKTGPCGSGFVDAFSCFLRSTEVEKGSDCVQPFIALQNCIK 502 +ESIDVKVQKALDCPCVA+LK GPCGS FVDAFSCFL+STE EKGSDCV+PFIALQ+CIK Sbjct: 52 NESIDVKVQKALDCPCVAELKNGPCGSQFVDAFSCFLKSTEEEKGSDCVKPFIALQDCIK 111 Query: 503 ENPAAFXXXXXXXXXXXXXXXXXXXXVRAPAWSRESKSK 619 NP AF VRAPAWSRESK K Sbjct: 112 INPEAFSKEILEEEENDEEAEKSNLKVRAPAWSRESKPK 150
>AK111408:Os11g0111000 | Length = 252 Score = 37.0 bits (84), Expect = 0.019 Identities = 32/89 (35%), Positives = 38/89 (42%), Gaps = 1/89 (1%) Frame = +1 Query: 37 CLIRRRAT*PLTPPVALALSLRRRSPETRVAAS*TRSTCCA*PTVDGPRPEPARTHGGGA 216 C RR A+ P+ P A+ L +P AA P V GP GG Sbjct: 115 CPRRRSASSPVPLPAAMPLLFPAATPLPLPAA-------LPPPMVRGPASHAGEAGSGGE 167 Query: 217 FS-AGRRPGTVAVAVSCPRTLLPRGARRR 300 S +GRRP AV SCP + R ARRR Sbjct: 168 GSGSGRRPPLCAVGTSCPSS--RRAARRR 194
>AK120767:Os09g0530200 | Length = 300 Score = 32.7 bits (73), Expect = 0.36 Identities = 27/65 (41%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Frame = -2 Query: 266 GQETATATVPGRRPAEK--APPPWV-RAGSGLGPSTVG*AQQVERVQEAATLVSGDRRRS 96 G TA AT P RR A + AP W R S L R EAA LV+ RR + Sbjct: 119 GSSTAGATCPSRRSATRGAAPRSWPWRTSSPLAAPA--------RAAEAAALVARARRAA 170 Query: 95 ERARA 81 E ARA Sbjct: 171 EAARA 175
>Os02g0770500:Os02g0770500 | Length = 637 Score = 32.3 bits (72), Expect = 0.48 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Frame = -1 Query: 489 CSAIKGC-----TQSDPFSTSVLLRKQENASTNPLPQGPVFKSATHGQSRAFCTLTSIDS 325 C+ GC Q S+L+ E +PLP G ++T + F L+S S Sbjct: 428 CTVAPGCPVRKQVQRCLEDMSILVTTYEGTHNHPLPVGATAMASTTSAAATFMLLSSTTS 487 Query: 324 SSSLND 307 SSS++D Sbjct: 488 SSSVSD 493
>Os05g0376700:Os05g0376700 | Length = 1472 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = -2 Query: 179 GPSTVG*AQQVERVQEAATLVSGDRRRSERARATGGVSGQVAR 51 GP+T+G + R Q A+ GDRR+ E + +TGG+ + AR Sbjct: 358 GPTTIGGKLHLTREQWEAS--QGDRRKGESSPSTGGLKPRKAR 398
>AK099035:Os02g0285800 | Length = 669 Score = 29.6 bits (65), Expect = 3.1 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Frame = -2 Query: 260 ETATATVPGRRPAEKAPPPWVRAG-SGLGPSTVG*AQQVERVQEAATLVSGDRRRSERAR 84 + AT T RR A K P R S + G +++ S D+ ERA Sbjct: 4 QAATTTTAARRLAPKPQPQANRCRPSSVSVVAAGRSRRRSARSSLRASASLDQEVKERAS 63 Query: 83 ATGGVSGQVARRLIRHTTL 27 G SGQ RR +R+ + Sbjct: 64 PAAGKSGQATRRDVRNIAI 82
>AK072177:Os02g0285800 | Length = 669 Score = 29.6 bits (65), Expect = 3.1 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Frame = -2 Query: 260 ETATATVPGRRPAEKAPPPWVRAG-SGLGPSTVG*AQQVERVQEAATLVSGDRRRSERAR 84 + AT T RR A K P R S + G +++ S D+ ERA Sbjct: 4 QAATTTTAARRLAPKPQPQANRCRPSSVSVVAAGRSRRRSARSSLRASASLDQEVKERAS 63 Query: 83 ATGGVSGQVARRLIRHTTL 27 G SGQ RR +R+ + Sbjct: 64 PAAGKSGQATRRDVRNIAI 82
>AK073886:Os01g0814000 | Length = 533 Score = 29.6 bits (65), Expect = 3.1 Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = +1 Query: 202 HGGGAFSAGRRPGTVAVAVSCPRTLLP-RGARRRGY 306 +GGGAF RPG V V V+ PRT P GA GY Sbjct: 116 NGGGAF----RPGGVGVGVAGPRTPRPMMGAPGNGY 147
>Os09g0122000:Os09g0122000 | Length = 666 Score = 29.3 bits (64), Expect = 4.0 Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 6/80 (7%) Frame = -2 Query: 257 TATATVPGRRPAEKAPPPWVRAGS---GLGPSTVG*AQQVERVQEAATLVSGDRRRSERA 87 T+ +TV P P PWV S G G T G R + A G RRR Sbjct: 485 TSRSTVDQVHPGSHRPAPWVPRVSRTRGHGRLTAGPHAAATRREAARPRPDGRRRRPPVR 544 Query: 86 RATG---GVSGQVARRLIRH 36 R+ G G G+ RR H Sbjct: 545 RSGGRERGGKGERRRRSTAH 564
>AK106254:Os06g0573700 | Length = 249 Score = 29.3 bits (64), Expect = 4.0 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Frame = -2 Query: 233 RRPAEKAPPP----WVRAGSGLGPSTVG*AQQVERVQEAATLVSGDRRRSERARATGGVS 66 RRPAE+A W G G EA ++ +G+RRR RA A GG Sbjct: 171 RRPAEEARKESACDWASGGRVWKRMAGG--------SEAGSVGAGERRRQRRAAAGGGAV 222 Query: 65 GQ 60 GQ Sbjct: 223 GQ 224
>AK109108:Os05g0120300 | Length = 220 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -2 Query: 197 RAGSGLGP-STVG*AQQVERVQEAATLVSGDRRRSERARATGGVSGQVARRL 45 RAGSG G S G + +GDR+R R R++ G + VARRL Sbjct: 137 RAGSGGGGGSDAGSVNSASSITRETASTAGDRKRIRRRRSSKGCA--VARRL 186
>AK064808:Os03g0792400 | Length = 552 Score = 28.9 bits (63), Expect = 5.3 Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%) Frame = +2 Query: 113 PRREWPPP---ELALPAVLSRPSMGQDQSQPGP 202 PRR WPPP A P SRP PGP Sbjct: 28 PRRPWPPPPRRSRAPPWSTSRPPGSASPGPPGP 60
>AK110380: | Length = 842 Score = 28.9 bits (63), Expect = 5.3 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = +1 Query: 1 GGPNWLPSSKVVCLIRRRAT*PLTPPVALALS 96 G P+W+P S CL R R L+PP A LS Sbjct: 381 GSPDWIPQSADACLSRPR----LSPPRASLLS 408
>AK069906:Os01g0828300 | Length = 674 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/60 (33%), Positives = 28/60 (46%) Frame = +1 Query: 64 PLTPPVALALSLRRRSPETRVAAS*TRSTCCA*PTVDGPRPEPARTHGGGAFSAGRRPGT 243 PLTP +++ SPET V AS + PT D P+P+ +R+ A GT Sbjct: 65 PLTP---VSVPANASSPETPVDASGGSNAGATAPTRDAPQPDRSRSTPPAAVGVRGSAGT 121
>AK068539:Os03g0673600 | Length = 194 Score = 28.9 bits (63), Expect = 5.3 Identities = 25/60 (41%), Positives = 26/60 (43%) Frame = +1 Query: 100 RRRSPETRVAAS*TRSTCCA*PTVDGPRPEPARTHGGGAFSAGRRPGTVAVAVSCPRTLL 279 RRR P R T S A GPRP+P T GG AGRR VSC R L Sbjct: 102 RRRRPGERGVV--TTSEAAA----SGPRPDP--TSCGGRLRAGRRFPLFFFFVSCGRNNL 153
>AK062334:Os03g0673600 | Length = 194 Score = 28.9 bits (63), Expect = 5.3 Identities = 25/60 (41%), Positives = 26/60 (43%) Frame = +1 Query: 100 RRRSPETRVAAS*TRSTCCA*PTVDGPRPEPARTHGGGAFSAGRRPGTVAVAVSCPRTLL 279 RRR P R T S A GPRP+P T GG AGRR VSC R L Sbjct: 102 RRRRPGERGVV--TTSEAAA----SGPRPDP--TSCGGRLRAGRRFPLFFFFVSCGRNNL 153
>AK111967:Os04g0684900 | Length = 329 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%) Frame = +2 Query: 98 FAAGRPRREWPPPELA-LPAVLSRPSMGQDQSQPGPTV 208 FAAGR +++ PPP +A +P+ + +G+ + QP P V Sbjct: 18 FAAGRKKQQPPPPGMAFVPSEFAAAGVGR-KRQPAPPV 54
>AK105262:Os03g0727900 | Length = 568 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 398 GSGFVDAFSCFLRSTEVEKGSDCV 469 G G VD C+LR++E E+G D V Sbjct: 108 GPGTVDNVKCYLRTSESEEGVDAV 131
>AK066891:Os05g0429600 | Length = 129 Score = 28.5 bits (62), Expect = 6.9 Identities = 29/98 (29%), Positives = 35/98 (35%), Gaps = 11/98 (11%) Frame = +1 Query: 40 LIRRRAT*PLTPPVALALSLRRRSPETRVAAS*TRSTC-------CA*PTVDGPRPEPAR 198 +IRR TP A RRR P A + TR+ C P P P R Sbjct: 1 MIRREGGRAATPASARTRPRRRRRPPATAAGARTRAPCRRTRRPWRPSRVPPAPAPSPPR 60 Query: 199 THGGGAFSAGRRPGTVAVAVSCP----RTLLPRGARRR 300 T G + R A + P R+ PR RRR Sbjct: 61 TAGRRRRTRTARARRAAAPATRPSWTRRSRPPRCRRRR 98
>Os03g0257600:Os03g0257600 | Length = 568 Score = 28.1 bits (61), Expect = 9.0 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Frame = -2 Query: 236 GRRPAEKAP---PPWVRAGSGLGPSTVG*AQQVERVQEAATLVSGDRRRSERARATGGVS 66 G RP E + PP+ R S L S + + R +E + +G+R ER GG Sbjct: 494 GARPYESSDHVHPPYARIVSALERSN----EHIARHEEVRRIGTGERVLQERVYGAGGAP 549 Query: 65 GQ 60 G+ Sbjct: 550 GR 551 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,266,741 Number of extensions: 483784 Number of successful extensions: 1868 Number of sequences better than 10.0: 20 Number of HSP's gapped: 1864 Number of HSP's successfully gapped: 20 Length of query: 306 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 206 Effective length of database: 11,395,755 Effective search space: 2347525530 Effective search space used: 2347525530 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
