ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf170g09 |
|---|---|
| Clone Library Name | barley_pub |
>P46013:KI67_HUMAN Antigen KI-67 - Homo sapiens (Human)| Length = 3256 Score = 34.3 bits (77), Expect = 0.72 Identities = 45/174 (25%), Positives = 66/174 (37%), Gaps = 4/174 (2%) Frame = +1 Query: 100 GLSQQPRQPAPVRVIAAD-GSLKELPASPGVTVSDVLGGSAASFFVCNSDALYFDQSPPA 276 G +QPR P D S +EL +PG T ++ G+A SF D P Sbjct: 2900 GSRRQPRAPKEKAQPLEDLASFQELSQTPGHT-EELANGAADSFTSAPKQTP--DSGKPL 2956 Query: 277 LASGEVLRPGQIYFVLPAALQRRPLSSAEMVSLAVRASSAIADKKPQQRRGRFSG---GK 447 S VLR ++ V R P+ S S+ P +R G G G Sbjct: 2957 KISRRVLRAPKVEPVGDVVSTRDPVKSQSK-------SNTSLPPLPFKRGGGKDGSVTGT 3009 Query: 448 KKVRVMPVHEELEDGEDVLLNEKLNERTLGEFAVSPKSEEKIAVVGARSRLKMK 609 K++R MP EE+ + +++ R G KS E + ++ R K Sbjct: 3010 KRLRCMPAPEEIVEELPASKKQRVAPRARG------KSSEPVVIMKRSLRTSAK 3057
>P06719:KNOB_PLAFN Knob-associated histidine-rich protein precursor - Plasmodium| falciparum (isolate NF7 / Ghana) Length = 657 Score = 33.9 bits (76), Expect = 0.93 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%) Frame = -3 Query: 383 RTASETISALDSGRRCNAAGSTKYICPGRSTSPDASAGGLWSK*SASELHTKKDAALPPR 204 +T + T +A + G+ C A G+TK STS +A+ SK + E T K+A Sbjct: 523 KTGASTNAATNKGQ-CAAEGATKGATKEASTSKEATKEASTSKEATKEASTSKEATKEAS 581 Query: 203 TSETVTPGLA---GSSFSEPSAAMTLTGA 126 TS+ T + G++ + A + TGA Sbjct: 582 TSKGATKEASTTEGATKGASTTAGSTTGA 610
>P46593:HWP1_CANAL Hyphal wall protein 1 - Candida albicans (Yeast)| Length = 634 Score = 32.3 bits (72), Expect = 2.7 Identities = 26/94 (27%), Positives = 41/94 (43%) Frame = -3 Query: 404 SAIAELARTASETISALDSGRRCNAAGSTKYICPGRSTSPDASAGGLWSK*SASELHTKK 225 S +A +A A S + A T I PG T+P S+G + S++ + T + Sbjct: 524 SPVAPGTESAPAGPGASSSPKSSVLASETSPIAPGAETAPAGSSGAITIPESSAVVSTTE 583 Query: 224 DAALPPRTSETVTPGLAGSSFSEPSAAMTLTGAG 123 A P T E+V +++S + T GAG Sbjct: 584 GAI--PTTLESVPLMQPSANYSSVAPISTFEGAG 615
>Q92XS8:GLYA2_RHIME Serine hydroxymethyltransferase 2 - Rhizobium meliloti| (Sinorhizobium meliloti) Length = 422 Score = 32.3 bits (72), Expect = 2.7 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 4/91 (4%) Frame = +1 Query: 178 SPGVTVSDVLGGSAASFFVCNSDALYFDQSPPALASGEVLRPGQIYFVLPAALQR--RPL 351 S GV+ D + CN + + FD +PPA+ SG I PAA R R Sbjct: 324 SKGVSGKDAEEALGRAGLTCNKNGIPFDPAPPAVTSG-------IRLGTPAATSRGFREA 376 Query: 352 SSAEMVSLAVRASSAIADKK--PQQRRGRFS 438 E+ +L A+ ++ Q+RR R S Sbjct: 377 EFNEVGALIANVLDALGTEQSGEQERRARMS 407
>P46531:NOTC1_HUMAN Neurogenic locus notch homolog protein 1 precursor - Homo sapiens| (Human) Length = 2556 Score = 32.0 bits (71), Expect = 3.5 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = -3 Query: 443 PPLKRPRLCCGFLSAIAELARTASETISALDSGRRCNAAGSTK-YICPGRSTSP 285 PPL P LC L A+A S+ +G +C AA T+ +C G P Sbjct: 2 PPLLAPLLCLALLPALAARGPRCSQPGETCLNGGKCEAANGTEACVCGGAFVGP 55
>Q10009:YSV3_CAEEL Uncharacterized protein T19C3.3 - Caenorhabditis elegans| Length = 92 Score = 32.0 bits (71), Expect = 3.6 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = +1 Query: 235 CNSDALYFDQSPPALASGEVLRP---GQIYFVLPAALQRRPLSSAEMVS 372 CN+ F Q PPA+AS + + P QI+ +PA+ R P + ++VS Sbjct: 25 CNTRDRLFGQDPPAVASPKRVTPTFKSQIFDDVPASPSRTPKRTVQVVS 73
>Q9ZJC8:YE91_HELPJ Putative phosphate permease jhp_1384 - Helicobacter pylori J99| (Campylobacter pylori J99) Length = 533 Score = 32.0 bits (71), Expect = 3.6 Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%) Frame = +1 Query: 319 VLPAALQRRPLSSAEMVSLAVRASSAIADKKPQQRRGRFSGGKKKVRVMPVHEELEDGED 498 VL A+ P+SS +V AV + ++ +Q R RF+ + + E+LE+ E Sbjct: 388 VLLASQLGLPVSSTHIVVGAVFGVGFLRERLREQSRRRFARIRDNIVAAHFGEDLEEIEG 447 Query: 499 VLLNEKLNERTLGEFAVSPKSEEKIAVVGARSRLKMKLKRALSII--QEVAE*SVPQK 666 L E+ ++ L E ++ +S +K LK K K++L + +EV + S+ +K Sbjct: 448 FL--ERFDKANLKEKSLMLESLKKSKNTAIALELKKKEKKSLKKVYKEEVIKRSILKK 503
>O26024:Y1491_HELPY Putative phosphate permease HP_1491 - Helicobacter pylori| (Campylobacter pylori) Length = 533 Score = 32.0 bits (71), Expect = 3.6 Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%) Frame = +1 Query: 319 VLPAALQRRPLSSAEMVSLAVRASSAIADKKPQQRRGRFSGGKKKVRVMPVHEELEDGED 498 VL A+ P+SS +V AV + ++ +Q R RF+ + + E+LE+ E Sbjct: 388 VLLASQLGLPVSSTHIVVGAVFGVGFLRERLREQSRRRFARIRDNIVAAHFGEDLEEIEG 447 Query: 499 VLLNEKLNERTLGEFAVSPKSEEKIAVVGARSRLKMKLKRALSII--QEVAE*SVPQK 666 L E+ ++ L E ++ +S +K LK K K++L + +EV + S+ +K Sbjct: 448 FL--ERFDKANLKEKSLMLESLKKSKNTAIALELKKKEKKSLKKVYKEEVIKRSILKK 503
>Q126R4:RS20_POLSJ 30S ribosomal protein S20 - Polaromonas sp. (strain JS666 / ATCC| BAA-500) Length = 103 Score = 32.0 bits (71), Expect = 3.6 Identities = 22/84 (26%), Positives = 39/84 (46%) Frame = +1 Query: 397 IADKKPQQRRGRFSGGKKKVRVMPVHEELEDGEDVLLNEKLNERTLGEFAVSPKSEEKIA 576 +A KP+++ R + G+K+VR +D LN N ++ + K+ EK Sbjct: 1 MATAKPKKKNPRLASGRKRVR-----------QDTKLN-AANTSLRSKYRTAVKNVEKAV 48 Query: 577 VVGARSRLKMKLKRALSIIQEVAE 648 G + + K +A SI+ VA+ Sbjct: 49 AAGDKDKAKDLFAKAQSIVDIVAD 72
>Q73NE3:HSLU_TREDE ATP-dependent hsl protease ATP-binding subunit hslU - Treponema| denticola Length = 485 Score = 31.6 bits (70), Expect = 4.7 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 11/105 (10%) Frame = +1 Query: 352 SSAEMVSLAVRASSAIADKKPQQRRGRFSGGKKKVRVMPVHEELEDG-EDVLLNEKLNER 528 SS +SL +S+A A++ Q SG ++K RVM +LED +V ++ + Sbjct: 162 SSGTTISLPSVSSTAQAEEHKAQNENDMSGTREKFRVMLRENKLEDKMVEVTISPSMGTP 221 Query: 529 TLGEFAVSPKSEE---------KIAVVGARSRLK-MKLKRALSII 633 T FA E+ + + GA+S+ K + +K A II Sbjct: 222 TFEFFAGGSNMEDIESAMSNISSMLMGGAKSKRKNVSVKEAREII 266
>P08640:MUC1_YEAST Mucin-like protein 1 precursor - Saccharomyces cerevisiae (Baker's| yeast) Length = 1367 Score = 30.8 bits (68), Expect = 7.9 Identities = 24/80 (30%), Positives = 31/80 (38%) Frame = -3 Query: 368 TISALDSGRRCNAAGSTKYICPGRSTSPDASAGGLWSK*SASELHTKKDAALPPRTSETV 189 TI+ + NAAG T +C ++ ASAG +T A P T+ Sbjct: 1191 TITTTECSAATNAAGETTSVCSAKTIVSSASAGE----------NTAPSATTPVTTAIPT 1240 Query: 188 TPGLAGSSFSEPSAAMTLTG 129 T SS SA T TG Sbjct: 1241 TVITTESSVGTNSAGETTTG 1260
>P16884:NFH_RAT Neurofilament heavy polypeptide - Rattus norvegicus (Rat)| Length = 1072 Score = 30.8 bits (68), Expect = 7.9 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Frame = +1 Query: 379 VRASSAIADKKPQQR-RGRFSGGKKKVRVMPVHEELEDGEDVLLNEKLNERTLGEFAVSP 555 V A +A ++K+ Q RF+G KVR + H +GE L ++ +GE Sbjct: 86 VAAVAARSEKEQLQALNDRFAGYIDKVRQLEAHNRTLEGEAAALRQQKGRAAMGELYERE 145 Query: 556 KSEEKIAVV---GARSRLKMKLKRALSIIQEVAE 648 E + AV+ AR ++++ + L I V + Sbjct: 146 VREMRGAVLRLGAARGHVRLEQEHLLEDIAHVRQ 179
>P34498:MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1| - Caenorhabditis elegans Length = 1131 Score = 30.8 bits (68), Expect = 7.9 Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 4/172 (2%) Frame = +1 Query: 106 SQQPRQPAPVRVIAADGSLKE---LPASPGVTVSDVLGGSAASFFVCNSDALYFDQSPPA 276 +Q+PR + I + L E L S V ++D L N + P Sbjct: 266 TQKPRLTVKQQAIKRENELWENNRLHRSGVVAMADELSSIFEDETDENRVTILVQNIVPP 325 Query: 277 LASGEVLRPGQIYFVLPAALQRRPLS-SAEMVSLAVRASSAIADKKPQQRRGRFSGGKKK 453 G ++ Q ++P ++ SA S+AVR + D+K Q + G K Sbjct: 326 FLDGRIVFTKQAQPIIPVVDTTCDMAVSAARGSVAVRKRREVEDRKKAQDKHWELAGSKL 385 Query: 454 VRVMPVHEELEDGEDVLLNEKLNERTLGEFAVSPKSEEKIAVVGARSRLKMK 609 +M V E+ ++ D ++ N + +FA K E ++ +K + Sbjct: 386 GNLMGVKEKKDETADPEDDDSGNYKESHQFASHMKDNEAVSDFAMEKSIKQQ 437 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 124,541,755 Number of extensions: 2460689 Number of successful extensions: 8217 Number of sequences better than 10.0: 13 Number of HSP's gapped: 8207 Number of HSP's successfully gapped: 13 Length of query: 305 Length of database: 100,686,439 Length adjustment: 113 Effective length of query: 192 Effective length of database: 69,691,104 Effective search space: 13380691968 Effective search space used: 13380691968 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
