ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf170g09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001052704.1| Oryza sativa (japonica cultivar-group) Os02g0193300 (Os02g0193300) mRNA, complete cds Length = 751 Score = 129 bits (65), Expect = 2e-26 Identities = 143/169 (84%) Strand = Plus / Plus Query: 222 gtccttcttcgtgtgcaactccgacgcgctctacttcgaccagagccctccggcgctggc 281 ||||||||||||||||||||||||| ||||||||||| || || || |||||| |||| Sbjct: 207 gtccttcttcgtgtgcaactccgacacgctctacttcaacgagcagccgccggcgatggc 266 Query: 282 atccggcgaggtactccggccgggacagatatacttcgtgctcccggcggcgttgcaacg 341 | || |||| ||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 267 gccgggggaggcgctccggccggggcagatatacttcgtgctcccggcggcgatgctcgg 326 Query: 342 gcggccgctgtcgagcgccgagatggtctcgcttgcggtgcgcgcgagc 390 || ||||||||| | |||||| |||| | |||| ||||||||||||||| Sbjct: 327 gcagccgctgtccaccgccgacatggccgcgctggcggtgcgcgcgagc 375 Score = 42.1 bits (21), Expect = 3.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 487 gacggcgaggacgttctgctgaacgagaagcttaacgagcggacgctcggggagttc 543 ||||||| ||||| ||||| |||||||||| ||||||||||| || || |||||| Sbjct: 481 gacggcggcgacgtcctgctccacgagaagctcaacgagcggactctgggtgagttc 537
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 129 bits (65), Expect = 2e-26 Identities = 143/169 (84%) Strand = Plus / Minus Query: 222 gtccttcttcgtgtgcaactccgacgcgctctacttcgaccagagccctccggcgctggc 281 ||||||||||||||||||||||||| ||||||||||| || || || |||||| |||| Sbjct: 5195081 gtccttcttcgtgtgcaactccgacacgctctacttcaacgagcagccgccggcgatggc 5195022 Query: 282 atccggcgaggtactccggccgggacagatatacttcgtgctcccggcggcgttgcaacg 341 | || |||| ||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 5195021 gccgggggaggcgctccggccggggcagatatacttcgtgctcccggcggcgatgctcgg 5194962 Query: 342 gcggccgctgtcgagcgccgagatggtctcgcttgcggtgcgcgcgagc 390 || ||||||||| | |||||| |||| | |||| ||||||||||||||| Sbjct: 5194961 gcagccgctgtccaccgccgacatggccgcgctggcggtgcgcgcgagc 5194913 Score = 123 bits (62), Expect = 1e-24 Identities = 152/182 (83%) Strand = Plus / Minus Query: 222 gtccttcttcgtgtgcaactccgacgcgctctacttcgaccagagccctccggcgctggc 281 ||||||||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 5189589 gtccttcttcgtgtgcaactccgacgcgctctacttcaacgagcagccgccggcgctggc 5189530 Query: 282 atccggcgaggtactccggccgggacagatatacttcgtgctcccggcggcgttgcaacg 341 | || |||| ||||||||||| ||||| |||||||| |||||||||||| ||| | Sbjct: 5189529 gccgggggaggcgctccggccggggcagatttacttcgttctcccggcggcgatgctcgg 5189470 Query: 342 gcggccgctgtcgagcgccgagatggtctcgcttgcggtgcgcgcgagctcggcgatcgc 401 || |||||| || | |||||| |||| | |||| ||||||||||||||| | ||| |||| Sbjct: 5189469 gcagccgctatccaccgccgacatggccgcgctggcggtgcgcgcgagcgccgcgctcgc 5189410 Query: 402 gg 403 || Sbjct: 5189409 gg 5189408 Score = 95.6 bits (48), Expect = 3e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 220 gcgtccttcttcgtgtgcaactccgacgcgctctacttcgaccagagccctccggcgctg 279 |||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||| Sbjct: 5184122 gcgtccttcttcgtgtgcaactccgacgcgctctacttcgacgaccgcccgccggcgctg 5184063 Query: 280 gcatccggcgaggtactccggccgggacagatatacttcgtgct 323 | |||||||| ||||||||||| || | ||||||||||| Sbjct: 5184062 tcccccggcgagccgctccggccgggggagctctacttcgtgct 5184019 Score = 50.1 bits (25), Expect = 0.014 Identities = 49/57 (85%) Strand = Plus / Minus Query: 487 gacggcgaggacgttctgctgaacgagaagcttaacgagcggacgctcggggagttc 543 ||||||| ||||| ||||| |||||||||| |||||||||||||| || |||||| Sbjct: 5189306 gacggcggcgacgtcctgctccacgagaagctcaacgagcggacgctgggtgagttc 5189250 Score = 46.1 bits (23), Expect = 0.22 Identities = 38/43 (88%) Strand = Plus / Minus Query: 508 aacgagaagcttaacgagcggacgctcggggagttcgctgtgt 550 ||||||||||| ||||||| ||||||||| | |||||| |||| Sbjct: 5183810 aacgagaagctgaacgagcagacgctcggcgtgttcgccgtgt 5183768 Score = 44.1 bits (22), Expect = 0.87 Identities = 25/26 (96%) Strand = Plus / Minus Query: 444 gaagaagaaggtgcgcgtcatgccgg 469 |||||||||||||| ||||||||||| Sbjct: 5183886 gaagaagaaggtgcacgtcatgccgg 5183861 Score = 42.1 bits (21), Expect = 3.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 487 gacggcgaggacgttctgctgaacgagaagcttaacgagcggacgctcggggagttc 543 ||||||| ||||| ||||| |||||||||| ||||||||||| || || |||||| Sbjct: 5194807 gacggcggcgacgtcctgctccacgagaagctcaacgagcggactctgggtgagttc 5194751
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 129 bits (65), Expect = 2e-26 Identities = 143/169 (84%) Strand = Plus / Minus Query: 222 gtccttcttcgtgtgcaactccgacgcgctctacttcgaccagagccctccggcgctggc 281 ||||||||||||||||||||||||| ||||||||||| || || || |||||| |||| Sbjct: 88534 gtccttcttcgtgtgcaactccgacacgctctacttcaacgagcagccgccggcgatggc 88475 Query: 282 atccggcgaggtactccggccgggacagatatacttcgtgctcccggcggcgttgcaacg 341 | || |||| ||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 88474 gccgggggaggcgctccggccggggcagatatacttcgtgctcccggcggcgatgctcgg 88415 Query: 342 gcggccgctgtcgagcgccgagatggtctcgcttgcggtgcgcgcgagc 390 || ||||||||| | |||||| |||| | |||| ||||||||||||||| Sbjct: 88414 gcagccgctgtccaccgccgacatggccgcgctggcggtgcgcgcgagc 88366 Score = 123 bits (62), Expect = 1e-24 Identities = 152/182 (83%) Strand = Plus / Minus Query: 222 gtccttcttcgtgtgcaactccgacgcgctctacttcgaccagagccctccggcgctggc 281 ||||||||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 83042 gtccttcttcgtgtgcaactccgacgcgctctacttcaacgagcagccgccggcgctggc 82983 Query: 282 atccggcgaggtactccggccgggacagatatacttcgtgctcccggcggcgttgcaacg 341 | || |||| ||||||||||| ||||| |||||||| |||||||||||| ||| | Sbjct: 82982 gccgggggaggcgctccggccggggcagatttacttcgttctcccggcggcgatgctcgg 82923 Query: 342 gcggccgctgtcgagcgccgagatggtctcgcttgcggtgcgcgcgagctcggcgatcgc 401 || |||||| || | |||||| |||| | |||| ||||||||||||||| | ||| |||| Sbjct: 82922 gcagccgctatccaccgccgacatggccgcgctggcggtgcgcgcgagcgccgcgctcgc 82863 Query: 402 gg 403 || Sbjct: 82862 gg 82861 Score = 95.6 bits (48), Expect = 3e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 220 gcgtccttcttcgtgtgcaactccgacgcgctctacttcgaccagagccctccggcgctg 279 |||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||| Sbjct: 77575 gcgtccttcttcgtgtgcaactccgacgcgctctacttcgacgaccgcccgccggcgctg 77516 Query: 280 gcatccggcgaggtactccggccgggacagatatacttcgtgct 323 | |||||||| ||||||||||| || | ||||||||||| Sbjct: 77515 tcccccggcgagccgctccggccgggggagctctacttcgtgct 77472 Score = 50.1 bits (25), Expect = 0.014 Identities = 49/57 (85%) Strand = Plus / Minus Query: 487 gacggcgaggacgttctgctgaacgagaagcttaacgagcggacgctcggggagttc 543 ||||||| ||||| ||||| |||||||||| |||||||||||||| || |||||| Sbjct: 82759 gacggcggcgacgtcctgctccacgagaagctcaacgagcggacgctgggtgagttc 82703 Score = 46.1 bits (23), Expect = 0.22 Identities = 38/43 (88%) Strand = Plus / Minus Query: 508 aacgagaagcttaacgagcggacgctcggggagttcgctgtgt 550 ||||||||||| ||||||| ||||||||| | |||||| |||| Sbjct: 77263 aacgagaagctgaacgagcagacgctcggcgtgttcgccgtgt 77221 Score = 44.1 bits (22), Expect = 0.87 Identities = 25/26 (96%) Strand = Plus / Minus Query: 444 gaagaagaaggtgcgcgtcatgccgg 469 |||||||||||||| ||||||||||| Sbjct: 77339 gaagaagaaggtgcacgtcatgccgg 77314 Score = 42.1 bits (21), Expect = 3.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 487 gacggcgaggacgttctgctgaacgagaagcttaacgagcggacgctcggggagttc 543 ||||||| ||||| ||||| |||||||||| ||||||||||| || || |||||| Sbjct: 88260 gacggcggcgacgtcctgctccacgagaagctcaacgagcggactctgggtgagttc 88204
>dbj|AK108239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-G11, full insert sequence Length = 791 Score = 129 bits (65), Expect = 2e-26 Identities = 143/169 (84%) Strand = Plus / Plus Query: 222 gtccttcttcgtgtgcaactccgacgcgctctacttcgaccagagccctccggcgctggc 281 ||||||||||||||||||||||||| ||||||||||| || || || |||||| |||| Sbjct: 207 gtccttcttcgtgtgcaactccgacacgctctacttcaacgagcagccgccggcgatggc 266 Query: 282 atccggcgaggtactccggccgggacagatatacttcgtgctcccggcggcgttgcaacg 341 | || |||| ||||||||||| ||||||||||||||||||||||||||| ||| | Sbjct: 267 gccgggggaggcgctccggccggggcagatatacttcgtgctcccggcggcgatgctcgg 326 Query: 342 gcggccgctgtcgagcgccgagatggtctcgcttgcggtgcgcgcgagc 390 || ||||||||| | |||||| |||| | |||| ||||||||||||||| Sbjct: 327 gcagccgctgtccaccgccgacatggccgcgctggcggtgcgcgcgagc 375 Score = 42.1 bits (21), Expect = 3.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 487 gacggcgaggacgttctgctgaacgagaagcttaacgagcggacgctcggggagttc 543 ||||||| ||||| ||||| |||||||||| ||||||||||| || || |||||| Sbjct: 481 gacggcggcgacgtcctgctccacgagaagctcaacgagcggactctgggtgagttc 537
>dbj|AK243219.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100043J15, full insert sequence Length = 924 Score = 123 bits (62), Expect = 1e-24 Identities = 152/182 (83%) Strand = Plus / Plus Query: 222 gtccttcttcgtgtgcaactccgacgcgctctacttcgaccagagccctccggcgctggc 281 ||||||||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 218 gtccttcttcgtgtgcaactccgacgcgctctacttcaacgagcagccgccggcgctggc 277 Query: 282 atccggcgaggtactccggccgggacagatatacttcgtgctcccggcggcgttgcaacg 341 | || |||| ||||||||||| ||||| |||||||| |||||||||||| ||| | Sbjct: 278 gccgggggaggcgctccggccggggcagatttacttcgttctcccggcggcgatgctcgg 337 Query: 342 gcggccgctgtcgagcgccgagatggtctcgcttgcggtgcgcgcgagctcggcgatcgc 401 || |||||| || | |||||| |||| | |||| ||||||||||||||| | ||| |||| Sbjct: 338 gcagccgctatccaccgccgacatggccgcgctggcggtgcgcgcgagcgccgcgctcgc 397 Query: 402 gg 403 || Sbjct: 398 gg 399 Score = 50.1 bits (25), Expect = 0.014 Identities = 49/57 (85%) Strand = Plus / Plus Query: 487 gacggcgaggacgttctgctgaacgagaagcttaacgagcggacgctcggggagttc 543 ||||||| ||||| ||||| |||||||||| |||||||||||||| || |||||| Sbjct: 501 gacggcggcgacgtcctgctccacgagaagctcaacgagcggacgctgggtgagttc 557
>ref|NM_001052703.1| Oryza sativa (japonica cultivar-group) Os02g0193200 (Os02g0193200) mRNA, complete cds Length = 603 Score = 123 bits (62), Expect = 1e-24 Identities = 152/182 (83%) Strand = Plus / Plus Query: 222 gtccttcttcgtgtgcaactccgacgcgctctacttcgaccagagccctccggcgctggc 281 ||||||||||||||||||||||||||||||||||||| || || || ||||||||||| Sbjct: 159 gtccttcttcgtgtgcaactccgacgcgctctacttcaacgagcagccgccggcgctggc 218 Query: 282 atccggcgaggtactccggccgggacagatatacttcgtgctcccggcggcgttgcaacg 341 | || |||| ||||||||||| ||||| |||||||| |||||||||||| ||| | Sbjct: 219 gccgggggaggcgctccggccggggcagatttacttcgttctcccggcggcgatgctcgg 278 Query: 342 gcggccgctgtcgagcgccgagatggtctcgcttgcggtgcgcgcgagctcggcgatcgc 401 || |||||| || | |||||| |||| | |||| ||||||||||||||| | ||| |||| Sbjct: 279 gcagccgctatccaccgccgacatggccgcgctggcggtgcgcgcgagcgccgcgctcgc 338 Query: 402 gg 403 || Sbjct: 339 gg 340 Score = 50.1 bits (25), Expect = 0.014 Identities = 49/57 (85%) Strand = Plus / Plus Query: 487 gacggcgaggacgttctgctgaacgagaagcttaacgagcggacgctcggggagttc 543 ||||||| ||||| ||||| |||||||||| |||||||||||||| || |||||| Sbjct: 442 gacggcggcgacgtcctgctccacgagaagctcaacgagcggacgctgggtgagttc 498
>emb|CT834759.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA130C21, full insert sequence Length = 1169 Score = 113 bits (57), Expect = 1e-21 Identities = 141/169 (83%) Strand = Plus / Plus Query: 222 gtccttcttcgtgtgcaactccgacgcgctctacttcgaccagagccctccggcgctggc 281 |||||||||||| |||||||||||||||||||||||| || || || |||||| |||| Sbjct: 204 gtccttcttcgtctgcaactccgacgcgctctacttcaacgagcagccgccggcgatggc 263 Query: 282 atccggcgaggtactccggccgggacagatatacttcgtgctcccggcggcgttgcaacg 341 | || |||| ||||||||||| ||||||||||||||||||||||||||| | | | Sbjct: 264 gccgggggaggcgctccggccggggcagatatacttcgtgctcccggcggcgattctcgg 323 Query: 342 gcggccgctgtcgagcgccgagatggtctcgcttgcggtgcgcgcgagc 390 || ||||||||| | |||||| ||| | |||| ||||||||||||||| Sbjct: 324 gcagccgctgtccaccgccgacatgaccgcgctggcggtgcgcgcgagc 372 Score = 50.1 bits (25), Expect = 0.014 Identities = 49/57 (85%) Strand = Plus / Plus Query: 487 gacggcgaggacgttctgctgaacgagaagcttaacgagcggacgctcggggagttc 543 ||||||| ||||| ||||| |||||||||| |||||||||||||| || |||||| Sbjct: 478 gacggcggcgacgtcctgctccacgagaagctcaacgagcggacgctgggtgagttc 534
>ref|NM_001052702.1| Oryza sativa (japonica cultivar-group) Os02g0193100 (Os02g0193100) mRNA, complete cds Length = 845 Score = 95.6 bits (48), Expect = 3e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 220 gcgtccttcttcgtgtgcaactccgacgcgctctacttcgaccagagccctccggcgctg 279 |||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||| Sbjct: 256 gcgtccttcttcgtgtgcaactccgacgcgctctacttcgacgaccgcccgccggcgctg 315 Query: 280 gcatccggcgaggtactccggccgggacagatatacttcgtgct 323 | |||||||| ||||||||||| || | ||||||||||| Sbjct: 316 tcccccggcgagccgctccggccgggggagctctacttcgtgct 359 Score = 46.1 bits (23), Expect = 0.22 Identities = 38/43 (88%) Strand = Plus / Plus Query: 508 aacgagaagcttaacgagcggacgctcggggagttcgctgtgt 550 ||||||||||| ||||||| ||||||||| | |||||| |||| Sbjct: 568 aacgagaagctgaacgagcagacgctcggcgtgttcgccgtgt 610 Score = 44.1 bits (22), Expect = 0.87 Identities = 25/26 (96%) Strand = Plus / Plus Query: 444 gaagaagaaggtgcgcgtcatgccgg 469 |||||||||||||| ||||||||||| Sbjct: 492 gaagaagaaggtgcacgtcatgccgg 517
>dbj|AK109089.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A01, full insert sequence Length = 848 Score = 95.6 bits (48), Expect = 3e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 220 gcgtccttcttcgtgtgcaactccgacgcgctctacttcgaccagagccctccggcgctg 279 |||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||| Sbjct: 259 gcgtccttcttcgtgtgcaactccgacgcgctctacttcgacgaccgcccgccggcgctg 318 Query: 280 gcatccggcgaggtactccggccgggacagatatacttcgtgct 323 | |||||||| ||||||||||| || | ||||||||||| Sbjct: 319 tcccccggcgagccgctccggccgggggagctctacttcgtgct 362 Score = 44.1 bits (22), Expect = 0.87 Identities = 25/26 (96%) Strand = Plus / Plus Query: 444 gaagaagaaggtgcgcgtcatgccgg 469 |||||||||||||| ||||||||||| Sbjct: 495 gaagaagaaggtgcacgtcatgccgg 520 Score = 44.1 bits (22), Expect = 0.87 Identities = 34/38 (89%) Strand = Plus / Plus Query: 508 aacgagaagcttaacgagcggacgctcggggagttcgc 545 ||||||||||| ||||||| ||||||||| | |||||| Sbjct: 571 aacgagaagctgaacgagcagacgctcggcgtgttcgc 608
>ref|NM_001064644.1| Oryza sativa (japonica cultivar-group) Os06g0625000 (Os06g0625000) mRNA, complete cds Length = 633 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 285 cggcgaggtactccggccgggacagatatacttcgtgctccc 326 ||||||| ||||||||||||| |||||||||||| ||||||| Sbjct: 237 cggcgagctactccggccggggcagatatacttcctgctccc 278 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 227 tcttcgtgtgcaactccgacgcgctctacttcgac 261 ||||| |||||| |||||||||||||||||||||| Sbjct: 179 tcttcctgtgcagctccgacgcgctctacttcgac 213
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 285 cggcgaggtactccggccgggacagatatacttcgtgctccc 326 ||||||| ||||||||||||| |||||||||||| ||||||| Sbjct: 24788677 cggcgagctactccggccggggcagatatacttcctgctccc 24788718 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 227 tcttcgtgtgcaactccgacgcgctctacttcgac 261 ||||| |||||| |||||||||||||||||||||| Sbjct: 24788619 tcttcctgtgcagctccgacgcgctctacttcgac 24788653 Score = 44.1 bits (22), Expect = 0.87 Identities = 34/38 (89%) Strand = Plus / Plus Query: 220 gcgtccttcttcgtgtgcaactccgacgcgctctactt 257 |||||||||||| || ||||||| || ||||||||||| Sbjct: 29619917 gcgtccttcttcatgcgcaactctgatgcgctctactt 29619954
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 285 cggcgaggtactccggccgggacagatatacttcgtgctccc 326 ||||||| ||||||||||||| |||||||||||| ||||||| Sbjct: 122358 cggcgagctactccggccggggcagatatacttcctgctccc 122399 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 227 tcttcgtgtgcaactccgacgcgctctacttcgac 261 ||||| |||||| |||||||||||||||||||||| Sbjct: 122300 tcttcctgtgcagctccgacgcgctctacttcgac 122334
>dbj|AK109866.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-A02, full insert sequence Length = 879 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 285 cggcgaggtactccggccgggacagatatacttcgtgctccc 326 ||||||| ||||||||||||| |||||||||||| ||||||| Sbjct: 289 cggcgagctactccggccggggcagatatacttcctgctccc 330 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 227 tcttcgtgtgcaactccgacgcgctctacttcgac 261 ||||| |||||| |||||||||||||||||||||| Sbjct: 231 tcttcctgtgcagctccgacgcgctctacttcgac 265 Score = 44.1 bits (22), Expect = 0.87 Identities = 31/34 (91%) Strand = Plus / Plus Query: 508 aacgagaagcttaacgagcggacgctcggggagt 541 |||||||||||||||||| |||| ||||| |||| Sbjct: 515 aacgagaagcttaacgagaggactctcggcgagt 548
>dbj|AK067104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096C13, full insert sequence Length = 1135 Score = 58.0 bits (29), Expect = 6e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 222 gtccttcttcgtgtgcaactccgacgcgctctacttc 258 |||||||||||||||||||| |||| ||||||||||| Sbjct: 207 gtccttcttcgtgtgcaacttcgacacgctctacttc 243 Score = 58.0 bits (29), Expect = 6e-05 Identities = 81/97 (83%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 295 ctccggccgggacagatatactt-cgtgctcccggcggcgttgcaacggcggccgctgtc 353 ||||||||||| ||||||||||| |||||||||| ||||| ||| ||| ||||||||| Sbjct: 281 ctccggccggggcagatatacttacgtgctcccgtcggcgatgctcgggcagccgctgtc 340 Query: 354 gagcgccgagatggtctcgcttgcggtgcgcgcgagc 390 | || ||| |||||| |||| |||||| ||||||| Sbjct: 341 catcgtcgacatggtcgcgctggcggtgttcgcgagc 377
>gb|BT009606.1| Triticum aestivum clone wre1n.pk0091.d5:fis, full insert mRNA sequence Length = 1469 Score = 52.0 bits (26), Expect = 0.004 Identities = 65/78 (83%) Strand = Plus / Minus Query: 818 tccgtccgaaattatttgtcgcaaaaatttataaagtaggatgtatcttaaaataaaata 877 ||||| |||||||| | ||| ||||||| ||||| |||||||||| || ||||||| Sbjct: 1313 tccgttcgaaattactcgtcacaaaaatggataaaaatggatgtatctacaattaaaata 1254 Query: 878 catctagatgcattcatt 895 ||||||||| |||||||| Sbjct: 1253 catctagatacattcatt 1236
>emb|CT009735.1| Triticum aestivum Length = 187340 Score = 48.1 bits (24), Expect = 0.056 Identities = 36/40 (90%) Strand = Plus / Plus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcatt 895 |||||||||| || |||||||||||||||| |||||||| Sbjct: 12651 ggatgtatctataactaaaatacatctagatacattcatt 12690
>emb|CT009625.1| Aegilops tauschii Length = 117310 Score = 48.1 bits (24), Expect = 0.056 Identities = 36/40 (90%) Strand = Plus / Plus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcatt 895 |||||||||| || |||||||||||||||| |||||||| Sbjct: 8924 ggatgtatctataactaaaatacatctagatacattcatt 8963
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 48.1 bits (24), Expect = 0.056 Identities = 36/40 (90%) Strand = Plus / Plus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcatt 895 |||||||||| || |||||||||||||||| |||||||| Sbjct: 88791 ggatgtatctagaactaaaatacatctagatacattcatt 88830
>gb|L41869.1|BLYBGQ6 Hordeum vulgare L. beta-glucosidase (BGQ60) gene, complete cds Length = 4152 Score = 48.1 bits (24), Expect = 0.056 Identities = 60/72 (83%) Strand = Plus / Minus Query: 827 aattatttgtcgcaaaaatttataaagtaggatgtatcttaaaataaaatacatctagat 886 ||||| ||||||||||||| ||| | |||||||||| || |||||||||||||||| Sbjct: 3114 aattacttgtcgcaaaaatgaatagaaatggatgtatctataactaaaatacatctagat 3055 Query: 887 gcattcattctt 898 ||| ||||||| Sbjct: 3054 acatccattctt 3043
>gb|DQ456871.1| Hordeum vulgare glucose-6-phosphate isomerase (GPI) mRNA, complete cds Length = 2421 Score = 46.1 bits (23), Expect = 0.22 Identities = 38/43 (88%) Strand = Plus / Minus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcattctt 898 |||||||||| |||||| |||||||||||| ||| ||||||| Sbjct: 2178 ggatgtatctagaaataatatacatctagatacatccattctt 2136
>gb|AC104118.2| Homo sapiens chromosome 5 clone RP11-343L5, complete sequence Length = 50004 Score = 46.1 bits (23), Expect = 0.22 Identities = 23/23 (100%) Strand = Plus / Minus Query: 861 tatcttaaaataaaatacatcta 883 ||||||||||||||||||||||| Sbjct: 41908 tatcttaaaataaaatacatcta 41886
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 46.1 bits (23), Expect = 0.22 Identities = 65/79 (82%) Strand = Plus / Minus Query: 818 tccgtccgaaattatttgtcgcaaaaatttataaagtaggatgtatcttaaaataaaata 877 |||||||| ||||| ||||| || |||| |||||| |||||||||| || || |||| Sbjct: 11620 tccgtccggaattacttgtcacataaatgtataaaaatggatgtatctagaattataata 11561 Query: 878 catctagatgcattcattc 896 ||||||||| ||| ||||| Sbjct: 11560 catctagatacatacattc 11542
>gb|AC022416.5|AC022416 Homo sapiens chromosome 5 clone CTC-489P21, complete sequence Length = 139980 Score = 46.1 bits (23), Expect = 0.22 Identities = 23/23 (100%) Strand = Plus / Plus Query: 861 tatcttaaaataaaatacatcta 883 ||||||||||||||||||||||| Sbjct: 124954 tatcttaaaataaaatacatcta 124976
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 46.1 bits (23), Expect = 0.22 Identities = 62/75 (82%) Strand = Plus / Minus Query: 821 gtccgaaattatttgtcgcaaaaatttataaagtaggatgtatcttaaaataaaatacat 880 ||||| ||||| |||||||| |||| ||||| |||||||||| || |||||||||| Sbjct: 33730 gtccggaattacttgtcgcataaatggataaaaatggatgtatctagaattaaaatacat 33671 Query: 881 ctagatgcattcatt 895 |||||| ||||||| Sbjct: 33670 ctagatagattcatt 33656
>gb|AF122049.1|AF122049 Hordeum vulgare tissue-type aleurone limit dextrinase mRNA, complete cds Length = 3429 Score = 46.1 bits (23), Expect = 0.22 Identities = 65/79 (82%) Strand = Plus / Minus Query: 818 tccgtccgaaattatttgtcgcaaaaatttataaagtaggatgtatcttaaaataaaata 877 |||||||| ||||| ||||| || |||| |||||| |||||||||| || || |||| Sbjct: 3292 tccgtccggaattacttgtcacataaatgtataaaaatggatgtatctagaattataata 3233 Query: 878 catctagatgcattcattc 896 ||||||||| ||| ||||| Sbjct: 3232 catctagatacatacattc 3214
>gb|DQ832213.1| Schizonella melanogramma AFTOL-ID 1722 RNA polymerase II second largest subunit (rpb2) gene, partial cds Length = 2082 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Minus Query: 220 gcgtccttcttcgtgtgcaact 241 |||||||||||||||||||||| Sbjct: 1598 gcgtccttcttcgtgtgcaact 1577
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.87 Identities = 25/26 (96%) Strand = Plus / Minus Query: 206 tcggcggcagcgccgcgtccttcttc 231 ||||||||||||||||| |||||||| Sbjct: 4139361 tcggcggcagcgccgcggccttcttc 4139336
>gb|AY235461.1| Triticum aestivum FCA-like protein (Fca-1B8) gene, exons 8 through 15, partial cds Length = 3631 Score = 44.1 bits (22), Expect = 0.87 Identities = 37/42 (88%) Strand = Plus / Plus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcattct 897 |||||||||| || |||||||||||||||| ||| |||||| Sbjct: 772 ggatgtatctagaactaaaatacatctagatacatccattct 813
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Plus Query: 450 gaaggtgcgcgtcatgccggtg 471 |||||||||||||||||||||| Sbjct: 3509010 gaaggtgcgcgtcatgccggtg 3509031
>gb|AE005870.1| Caulobacter crescentus CB15 section 196 of 359 of the complete genome Length = 11934 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Plus Query: 376 gcggtgcgcgcgagctcggcga 397 |||||||||||||||||||||| Sbjct: 1294 gcggtgcgcgcgagctcggcga 1315
>emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in linkage group 4, complete sequence Length = 228177 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Minus Query: 859 tgtatcttaaaataaaatacat 880 |||||||||||||||||||||| Sbjct: 157889 tgtatcttaaaataaaatacat 157868
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 44.1 bits (22), Expect = 0.87 Identities = 34/38 (89%) Strand = Plus / Plus Query: 220 gcgtccttcttcgtgtgcaactccgacgcgctctactt 257 |||||||||||| || ||||||| || ||||||||||| Sbjct: 63502 gcgtccttcttcatgcgcaactctgatgcgctctactt 63539
>emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in linkage group 4, complete sequence Length = 211817 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Plus Query: 859 tgtatcttaaaataaaatacat 880 |||||||||||||||||||||| Sbjct: 53967 tgtatcttaaaataaaatacat 53988
>gb|DQ534719.1| Rivellia tridentata 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 1199 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 733 tttaattggtttagtagattt 753 ||||||||||||||||||||| Sbjct: 76 tttaattggtttagtagattt 96
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 3.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 gaggcgggggcgcttcagcggcggg 444 |||||||| |||||||||||||||| Sbjct: 155380 gaggcgggcgcgcttcagcggcggg 155356
>gb|AY235469.1| Triticum aestivum nonfunctional FCA-like protein (Fca-2C9) gene, exons 8 through 15, partial sequence Length = 3511 Score = 42.1 bits (21), Expect = 3.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcattc 896 |||||||||| || |||||||||||||||| ||| ||||| Sbjct: 718 ggatgtatctagaactaaaatacatctagatacatccattc 758
>gb|AY235468.1| Triticum aestivum FCA-like protein (Fca-2A3) gene, exons 8 through 15, partial cds Length = 3601 Score = 42.1 bits (21), Expect = 3.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcattc 896 |||||||||| || |||||||||||||||| ||| ||||| Sbjct: 760 ggatgtatctagaactaaaatacatctagatacatccattc 800
>gb|AY235467.1| Triticum aestivum FCA-like protein (Fca-1C5) gene, exons 8 through 15, partial cds Length = 3508 Score = 42.1 bits (21), Expect = 3.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcattc 896 |||||||||| || |||||||||||||||| ||| ||||| Sbjct: 701 ggatgtatctagaactaaaatacatctagatacatccattc 741
>gb|AY235466.1| Triticum aestivum FCA-like protein (Fca-1F10) gene, exons 8 through 15, partial cds Length = 3502 Score = 42.1 bits (21), Expect = 3.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcattc 896 |||||||||| || |||||||||||||||| ||| ||||| Sbjct: 705 ggatgtatctagaactaaaatacatctagatacatccattc 745
>gb|AY235464.1| Triticum aestivum FCA-like protein (Fca-5A3) gene, exons 8 through 15, partial cds Length = 3593 Score = 42.1 bits (21), Expect = 3.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcattc 896 |||||||||| || |||||||||||||||| ||| ||||| Sbjct: 763 ggatgtatctagaactaaaatacatctagatacatccattc 803
>gb|AY235463.1| Triticum aestivum nonfunctional FCA-like protein (Fca-2E11) gene, exons 8 through 15, partial sequence Length = 3592 Score = 42.1 bits (21), Expect = 3.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcattc 896 |||||||||| || |||||||||||||||| ||| ||||| Sbjct: 758 ggatgtatctagaactaaaatacatctagatacatccattc 798
>gb|AY235462.1| Triticum aestivum FCA-like protein (Fca-4C5) gene, exons 8 through 15, partial cds Length = 3585 Score = 42.1 bits (21), Expect = 3.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcattc 896 |||||||||| || |||||||||||||||| ||| ||||| Sbjct: 746 ggatgtatctagaactaaaatacatctagatacatccattc 786
>gb|AY235448.1| Triticum aestivum FCA-like protein (Fca-2G10) gene, exons 8 through 15, partial cds Length = 3610 Score = 42.1 bits (21), Expect = 3.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcattc 896 |||||||||| || |||||||||||||||| ||| ||||| Sbjct: 769 ggatgtatctagaactaaaatacatctagatacatccattc 809
>gb|AY235447.1| Triticum aestivum FCA-like protein (Fca-5H8) gene, exons 8 through 15, partial cds Length = 3524 Score = 42.1 bits (21), Expect = 3.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 856 ggatgtatcttaaaataaaatacatctagatgcattcattc 896 |||||||||| || |||||||||||||||| ||| ||||| Sbjct: 748 ggatgtatctagaactaaaatacatctagatacatccattc 788
>gb|AC124402.5| Mus musculus BAC clone RP24-365M23 from chromosome 12, complete sequence Length = 205782 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 841 aaaatttataaagtaggatgt 861 ||||||||||||||||||||| Sbjct: 69316 aaaatttataaagtaggatgt 69296
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 665 aagttgtaaatactactacta 685 ||||||||||||||||||||| Sbjct: 1976105 aagttgtaaatactactacta 1976125
>gb|AC006340.5| Arabidopsis thaliana chromosome 2 clone T9I22 map CIC06C07, complete sequence Length = 95375 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 732 atttaattggtttagtagatt 752 ||||||||||||||||||||| Sbjct: 22580 atttaattggtttagtagatt 22600
>gb|AC153646.3| Mus musculus BAC clone RP24-493K8 from chromosome 13, complete sequence Length = 166314 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 667 gttgtaaatactactactact 687 ||||||||||||||||||||| Sbjct: 86951 gttgtaaatactactactact 86971
>emb|BX470171.6| Zebrafish DNA sequence from clone CH211-22O10 in linkage group 6, complete sequence Length = 34033 Score = 42.1 bits (21), Expect = 3.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 664 aaagttgtaaatactactactacta 688 |||| |||||||||||||||||||| Sbjct: 31358 aaagatgtaaatactactactacta 31382
>emb|BX005445.10| Zebrafish DNA sequence from clone DKEYP-72A4 in linkage group 5, complete sequence Length = 123526 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 857 gatgtatcttaaaataaaata 877 ||||||||||||||||||||| Sbjct: 96433 gatgtatcttaaaataaaata 96413
>gb|AF548379.1| Aegilops tauschii isoamylase gene, complete cds Length = 9643 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 818 tccgtccgaaattatttgtcg 838 ||||||||||||||||||||| Sbjct: 5979 tccgtccgaaattatttgtcg 5999 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 146,188,999 Number of extensions: 8686328 Number of successful extensions: 236898 Number of sequences better than 10.0: 51 Number of HSP's gapped: 236890 Number of HSP's successfully gapped: 84 Length of query: 916 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 893 Effective length of database: 18,503,978,556 Effective search space: 16524052850508 Effective search space used: 16524052850508 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
