ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf173k08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK059744:Os10g0457500 | 374 | e-104 | 2 | AK119176:Os07g0577600 | 32 | 0.73 | 3 | AK104651:Os07g0577600 | 32 | 0.73 | 4 | AK104608:Os07g0577600 | 32 | 0.73 | 5 | AK104283:Os07g0577600 | 32 | 0.73 | 6 | AK104177:Os07g0577600 | 32 | 0.73 | 7 | AK104127:Os07g0577600 | 32 | 0.73 | 8 | AK104016:Os07g0577600 | 32 | 0.73 | 9 | AK103966:Os07g0577600 | 32 | 0.73 | 10 | AK060987:Os07g0577600 | 32 | 0.73 | 11 | AF010321:Os07g0577600 | 32 | 0.73 | 12 | Os12g0130200:Os12g0130200 | 29 | 4.7 | 13 | AK102709:Os10g0572300 | 29 | 4.7 | 14 | AK069658:Os03g0708600 | 29 | 4.7 | 15 | AK069199:Os03g0708600 | 29 | 4.7 | 16 | AK065479:Os10g0572300 | 29 | 4.7 | 17 | Os11g0132900:Os11g0132900 | 28 | 6.2 | 18 | AK108521: | 28 | 6.2 | 19 | AK105572:Os07g0601900 | 28 | 6.2 |
|---|
>AK059744:Os10g0457500 | Length = 205 Score = 374 bits (961), Expect = e-104 Identities = 183/196 (93%), Positives = 190/196 (96%) Frame = +3 Query: 111 RVLPKAVTFVTGNAKKLEEVRAILGSSIPFQSLKLDLPELQGEPEDISKEKARMAASQVN 290 R LPKAVTFVTGNAKKLEEVRAILGSSIPFQSLKLDLPELQGEPEDISKEKARMAASQVN Sbjct: 10 RALPKAVTFVTGNAKKLEEVRAILGSSIPFQSLKLDLPELQGEPEDISKEKARMAASQVN 69 Query: 291 GPVLVEDTCLCFNALKGLPGPYIKWFLEKIGHEGLNNLLKAYEDKSAFAMCIFSLALGPE 470 GPVLVEDTCLCFNALKGLPGPYIKWFLEK GHEGLNNLL AYEDKSAFAMCIFSLALGP Sbjct: 70 GPVLVEDTCLCFNALKGLPGPYIKWFLEKTGHEGLNNLLLAYEDKSAFAMCIFSLALGPG 129 Query: 471 EEPITFVGKTAGKIVPARGPADFGWDPVFQPDGFEQTYAEMPKSEKNEISHRGRALALVK 650 EEP+TFVGKTAGKIVPARGPADFGWDPVFQPDGF+QTYAEMPKS KN+ISHRG+ALALVK Sbjct: 130 EEPMTFVGKTAGKIVPARGPADFGWDPVFQPDGFDQTYAEMPKSVKNQISHRGKALALVK 189 Query: 651 EHFASANYEVQSDGLA 698 EHFA+ANY+VQ+DG A Sbjct: 190 EHFAAANYKVQNDGSA 205
>AK119176:Os07g0577600 | Length = 263 Score = 31.6 bits (70), Expect = 0.73 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +3 Query: 378 IGHEGLNNLLKAYEDKSAFAMCIFSLALGPEEEPITFVGKTAGKIVPARGPADFGWDPV 554 +G G + L + +S+ A F++ + PI F G T + P DFG+DP+ Sbjct: 26 LGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPL 84
>AK104651:Os07g0577600 | Length = 263 Score = 31.6 bits (70), Expect = 0.73 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +3 Query: 378 IGHEGLNNLLKAYEDKSAFAMCIFSLALGPEEEPITFVGKTAGKIVPARGPADFGWDPV 554 +G G + L + +S+ A F++ + PI F G T + P DFG+DP+ Sbjct: 26 LGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPL 84
>AK104608:Os07g0577600 | Length = 263 Score = 31.6 bits (70), Expect = 0.73 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +3 Query: 378 IGHEGLNNLLKAYEDKSAFAMCIFSLALGPEEEPITFVGKTAGKIVPARGPADFGWDPV 554 +G G + L + +S+ A F++ + PI F G T + P DFG+DP+ Sbjct: 26 LGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPL 84
>AK104283:Os07g0577600 | Length = 263 Score = 31.6 bits (70), Expect = 0.73 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +3 Query: 378 IGHEGLNNLLKAYEDKSAFAMCIFSLALGPEEEPITFVGKTAGKIVPARGPADFGWDPV 554 +G G + L + +S+ A F++ + PI F G T + P DFG+DP+ Sbjct: 26 LGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPL 84
>AK104177:Os07g0577600 | Length = 263 Score = 31.6 bits (70), Expect = 0.73 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +3 Query: 378 IGHEGLNNLLKAYEDKSAFAMCIFSLALGPEEEPITFVGKTAGKIVPARGPADFGWDPV 554 +G G + L + +S+ A F++ + PI F G T + P DFG+DP+ Sbjct: 26 LGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPL 84
>AK104127:Os07g0577600 | Length = 263 Score = 31.6 bits (70), Expect = 0.73 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +3 Query: 378 IGHEGLNNLLKAYEDKSAFAMCIFSLALGPEEEPITFVGKTAGKIVPARGPADFGWDPV 554 +G G + L + +S+ A F++ + PI F G T + P DFG+DP+ Sbjct: 26 LGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPL 84
>AK104016:Os07g0577600 | Length = 263 Score = 31.6 bits (70), Expect = 0.73 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +3 Query: 378 IGHEGLNNLLKAYEDKSAFAMCIFSLALGPEEEPITFVGKTAGKIVPARGPADFGWDPV 554 +G G + L + +S+ A F++ + PI F G T + P DFG+DP+ Sbjct: 26 LGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPL 84
>AK103966:Os07g0577600 | Length = 263 Score = 31.6 bits (70), Expect = 0.73 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +3 Query: 378 IGHEGLNNLLKAYEDKSAFAMCIFSLALGPEEEPITFVGKTAGKIVPARGPADFGWDPV 554 +G G + L + +S+ A F++ + PI F G T + P DFG+DP+ Sbjct: 26 LGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPL 84
>AK060987:Os07g0577600 | Length = 263 Score = 31.6 bits (70), Expect = 0.73 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +3 Query: 378 IGHEGLNNLLKAYEDKSAFAMCIFSLALGPEEEPITFVGKTAGKIVPARGPADFGWDPV 554 +G G + L + +S+ A F++ + PI F G T + P DFG+DP+ Sbjct: 26 LGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPL 84
>AF010321:Os07g0577600 | Length = 253 Score = 31.6 bits (70), Expect = 0.73 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +3 Query: 378 IGHEGLNNLLKAYEDKSAFAMCIFSLALGPEEEPITFVGKTAGKIVPARGPADFGWDPV 554 +G G + L + +S+ A F++ + PI F G T + P DFG+DP+ Sbjct: 16 LGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPL 74
>Os12g0130200:Os12g0130200 | Length = 729 Score = 28.9 bits (63), Expect = 4.7 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = -2 Query: 581 CLFKSIWLEYRVPSKISRPSGRYNFPCCFSNKCDWFLLWSKSKGKDAHSK 432 C F +I Y + S + F +SN D ++WS ++G+ HS+ Sbjct: 56 CGFYNITKAYNITSA-------FTFSIWYSNSADKAIVWSANRGRPVHSR 98
>AK102709:Os10g0572300 | Length = 543 Score = 28.9 bits (63), Expect = 4.7 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = +3 Query: 156 KLEEVRAILGSSIPFQSLKLDLPELQGEPEDISK-EKARMAASQVNGPVLVEDTCLCFNA 332 +LEE+ +GS L+LD +L+ PE I K EK +E L +N Sbjct: 343 ELEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLEK-------------LEILTLHYNR 389 Query: 333 LKGLP 347 +KGLP Sbjct: 390 IKGLP 394
>AK069658:Os03g0708600 | Length = 736 Score = 28.9 bits (63), Expect = 4.7 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Frame = +3 Query: 306 EDTCLCFNALKGLPGPYIKWFLEKIGHEGLNNLLKA-YEDKSAFAMCIFSLALGPEEEPI 482 ED + + K +P P KW K+G E L + KA Y++ S M S+ LG ++ + Sbjct: 299 EDFNISYKGSK-VPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMA--SIPLGLQQRDV 355 Query: 483 -----TFVGKTAGKIVP 518 T GKTA ++P Sbjct: 356 IGIAETGSGKTAAFVLP 372
>AK069199:Os03g0708600 | Length = 736 Score = 28.9 bits (63), Expect = 4.7 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Frame = +3 Query: 306 EDTCLCFNALKGLPGPYIKWFLEKIGHEGLNNLLKA-YEDKSAFAMCIFSLALGPEEEPI 482 ED + + K +P P KW K+G E L + KA Y++ S M S+ LG ++ + Sbjct: 299 EDFNISYKGSK-VPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMA--SIPLGLQQRDV 355 Query: 483 -----TFVGKTAGKIVP 518 T GKTA ++P Sbjct: 356 IGIAETGSGKTAAFVLP 372
>AK065479:Os10g0572300 | Length = 409 Score = 28.9 bits (63), Expect = 4.7 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = +3 Query: 156 KLEEVRAILGSSIPFQSLKLDLPELQGEPEDISK-EKARMAASQVNGPVLVEDTCLCFNA 332 +LEE+ +GS L+LD +L+ PE I K EK +E L +N Sbjct: 209 ELEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLEK-------------LEILTLHYNR 255 Query: 333 LKGLP 347 +KGLP Sbjct: 256 IKGLP 260
>Os11g0132900:Os11g0132900 | Length = 1134 Score = 28.5 bits (62), Expect = 6.2 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = -2 Query: 581 CLFKSIWLEYRVPSKISRPSGRYNFPCCFSNKCDWFLLWSKSKGKDAHSK 432 C F +I Y + S + F +SN D ++WS ++G+ HS+ Sbjct: 374 CGFYNITNAYNITSA-------FTFSIWYSNSADKAIVWSANRGRPVHSR 416
>AK108521: | Length = 156 Score = 28.5 bits (62), Expect = 6.2 Identities = 16/60 (26%), Positives = 24/60 (40%) Frame = +3 Query: 117 LPKAVTFVTGNAKKLEEVRAILGSSIPFQSLKLDLPELQGEPEDISKEKARMAASQVNGP 296 LP+ F + R L S P +S + +PE I KEK + + V+ P Sbjct: 4 LPRTTAFAPRFVARAAAPRVALASRTPTRSYGIGSNMSDNDPERIEKEKKKTLSGDVDSP 63
>AK105572:Os07g0601900 | Length = 224 Score = 28.5 bits (62), Expect = 6.2 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = -1 Query: 696 PIHHSELHNWQKRNVLSPVQELSPYEIFHSF-RTWASQHMFVQIHL 562 P+ HS +N +VLSP +S + I H + S+H+++ I++ Sbjct: 156 PLDHSHSYNNTMVDVLSPFHSVSHFSISHIYVNVNKSRHIYININV 201 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,432,540 Number of extensions: 548326 Number of successful extensions: 1507 Number of sequences better than 10.0: 19 Number of HSP's gapped: 1507 Number of HSP's successfully gapped: 19 Length of query: 283 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 184 Effective length of database: 11,435,796 Effective search space: 2104186464 Effective search space used: 2104186464 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
