>emb|CR388029.10| Zebrafish DNA sequence from clone CH211-214O13 in linkage group 14,
              complete sequence
          Length = 210704
 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 368    gagtgaagaataaactggcagcat 391
              ||||||||||||||||||||||||
Sbjct: 103013 gagtgaagaataaactggcagcat 103036

>emb|BX546475.20| Zebrafish DNA sequence from clone CH211-263J13 in linkage group 14,
            complete sequence
          Length = 142158

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 368  gagtgaagaataaactggcagcat 391
            ||||||||||||||||||||||||
Sbjct: 5310 gagtgaagaataaactggcagcat 5287

>ref|NM_204604.1| Gallus gallus transcription factor (SP1), mRNA
 emb|AJ317960.1|GGA317960 Gallus gallus mRNA for transcription factor (SP1 gene)
          Length = 2662

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  caacaacaccctctcagggcaaa 121
           |||||||||||||||||||||||
Sbjct: 728 caacaacaccctctcagggcaaa 750

>emb|BX000701.25| Zebrafish DNA sequence from clone CH211-18I3 in linkage group 3, complete
              sequence
          Length = 181568

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 369    agtgaagaataaactggcagcat 391
              |||||||||||||||||||||||
Sbjct: 119606 agtgaagaataaactggcagcat 119584

>emb|BX470258.4| Zebrafish DNA sequence from clone CH211-278L13 in linkage group 15,
              complete sequence
          Length = 184626

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 369    agtgaagaataaactggcagcat 391
              |||||||||||||||||||||||
Sbjct: 118155 agtgaagaataaactggcagcat 118133

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 203     agctggccgggctgcccgatcag 225
               |||||||||||||||||||||||
Sbjct: 5284435 agctggccgggctgcccgatcag 5284413



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 204     gctggccgggctgcccgatcag 225
               ||||||||||||||||||||||
Sbjct: 5257260 gctggccgggctgcccgatcag 5257239

>emb|BX323888.8| Zebrafish DNA sequence from clone CH211-134G21 in linkage group 3,
             complete sequence
          Length = 178607

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 369   agtgaagaataaactggcagcat 391
             |||||||||||||||||||||||
Sbjct: 54461 agtgaagaataaactggcagcat 54483

>emb|AL935148.22| Zebrafish DNA sequence from clone CH211-196G2 in linkage group 8,
             complete sequence
          Length = 195396

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 369   agtgaagaataaactggcagcat 391
             |||||||||||||||||||||||
Sbjct: 79340 agtgaagaataaactggcagcat 79318

>gb|AC153915.5| Mus musculus 10 BAC RP23-329D23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 207169

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 143   tcaagtctctggaacagctgca 164
             ||||||||||||||||||||||
Sbjct: 42318 tcaagtctctggaacagctgca 42297

>gb|AC153022.1| Mus musculus 6 BAC RP23-115M13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 201949

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 143    tcaagtctctggaacagctgca 164
              ||||||||||||||||||||||
Sbjct: 145500 tcaagtctctggaacagctgca 145479

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 359     ggcccgccggagtgaagaata 379
               |||||||||||||||||||||
Sbjct: 2019844 ggcccgccggagtgaagaata 2019864

>gb|AY639948.1| Comamonas sp. JS46 insertion sequence ISCsp1 TnpA (tnpA) gene,
           complete cds
          Length = 1409

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 401 agaagccggcggcgcagttgc 421
           |||||||||||||||||||||
Sbjct: 75  agaagccggcggcgcagttgc 95

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 346    accgacgaacggcggcccgcc 366
              |||||||||||||||||||||
Sbjct: 177480 accgacgaacggcggcccgcc 177460

>emb|CU041360.9| S.lycopersicum DNA sequence from clone SL_MboI-129D14 on chromosome 4,
              complete sequence
          Length = 129590

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    tctctggaacagctgcacct 167
              ||||||||||||||||||||
Sbjct: 106398 tctctggaacagctgcacct 106417

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 206     tggccgggctgcccgatcag 225
               ||||||||||||||||||||
Sbjct: 1763447 tggccgggctgcccgatcag 1763466

>ref|XM_364937.1| Magnaporthe grisea 70-15 hypothetical protein (MG09782.4) partial
           mRNA
          Length = 1296

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 313 gccgacaacccgcggctgggcggcaact 340
           |||| ||||||||| |||||||||||||
Sbjct: 784 gccggcaacccgcgtctgggcggcaact 811

>ref|NM_126031.4| Arabidopsis thaliana protein binding (AT5G66330) mRNA, complete cds
          Length = 1554

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  tccaaggaacgatccctgaa 57
           ||||||||||||||||||||
Sbjct: 866 tccaaggaacgatccctgaa 885

>gb|AY323521.1| Danio rerio myostatin gene, complete cds
          Length = 6570

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  tcaagtctctggaacagctg 162
            ||||||||||||||||||||
Sbjct: 6114 tcaagtctctggaacagctg 6133

>gb|AY117205.1| Arabidopsis thaliana unknown protein (At5g66330) mRNA, complete cds
          Length = 1288

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  tccaaggaacgatccctgaa 57
           ||||||||||||||||||||
Sbjct: 698 tccaaggaacgatccctgaa 717

>gb|AY065384.1| Arabidopsis thaliana unknown protein (At5g66330) mRNA, complete cds
          Length = 1556

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  tccaaggaacgatccctgaa 57
           ||||||||||||||||||||
Sbjct: 866 tccaaggaacgatccctgaa 885

>emb|AJ890017.1| Triticum aestivum partial mRNA for putative leucine-rich repeat
           protein (lrr gene), cultivar Wyuna, from endosperm
           tissue
          Length = 659

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 ctctgcggcccgattccgac 272
           ||||||||||||||||||||
Sbjct: 325 ctctgcggcccgattccgac 344

>emb|BX323586.10| Zebrafish DNA sequence from clone CH211-3O3 in linkage group 9, complete
              sequence
          Length = 171172

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    tcaagtctctggaacagctg 162
              ||||||||||||||||||||
Sbjct: 104015 tcaagtctctggaacagctg 104034

>emb|BX901925.10| Zebrafish DNA sequence from clone DKEYP-86C11 in linkage group 17,
             complete sequence
          Length = 187245

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   acagctgcaccttcaacaga 175
             ||||||||||||||||||||
Sbjct: 89163 acagctgcaccttcaacaga 89182

>gb|AC159885.2| Mus musculus BAC clone RP24-432B19 from chromosome 12, complete
             sequence
          Length = 177570

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   tgttaatttatgtatgctgt 483
             ||||||||||||||||||||
Sbjct: 90040 tgttaatttatgtatgctgt 90021

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 201     cgagctggccgggctgcccg 220
               ||||||||||||||||||||
Sbjct: 1897037 cgagctggccgggctgcccg 1897018

>emb|BX294142.1| Rhodopirellula baltica SH 1 complete genome; segment 10/24
          Length = 294050

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 484   gtgcaagccgagatcgacggtcgt 507
             |||||||||||||||| |||||||
Sbjct: 20239 gtgcaagccgagatcgtcggtcgt 20216

>emb|AL672217.6| Zebrafish DNA sequence from clone BUSM1-72B14 Contains the gdf8 gene
            for growth differentiation factor 8, a novel gene similar
            to PSML1 (postmeiotic segregation increased 1-like
            protein), two novel genes, the 3' part of a novel gene, a
            novel glycoprotease, a novel gene and two CpG islands,
            complete sequence
          Length = 117322

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  tcaagtctctggaacagctg 162
            ||||||||||||||||||||
Sbjct: 6633 tcaagtctctggaacagctg 6652

>dbj|AB022211.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1L20
          Length = 47665

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    tccaaggaacgatccctgaa 57
             ||||||||||||||||||||
Sbjct: 37671 tccaaggaacgatccctgaa 37652

>emb|BX830325.1|CNS0A1D8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB73ZE01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1479

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  tccaaggaacgatccctgaa 57
           ||||||||||||||||||||
Sbjct: 791 tccaaggaacgatccctgaa 810

>emb|BX832605.1|CNS0A0XO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH84ZA06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1409

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  tccaaggaacgatccctgaa 57
           ||||||||||||||||||||
Sbjct: 804 tccaaggaacgatccctgaa 823

>emb|BX832433.1|CNS0A0W2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH72ZE05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1417

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  tccaaggaacgatccctgaa 57
           ||||||||||||||||||||
Sbjct: 802 tccaaggaacgatccctgaa 821

>emb|AL691424.7| Mouse DNA sequence from clone RP23-219K12 on chromosome X, complete
              sequence
          Length = 194520

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 469    atttatgtatgctgtgtgca 488
              ||||||||||||||||||||
Sbjct: 107952 atttatgtatgctgtgtgca 107971

>dbj|AB070942.1| Streptomyces avermitilis polyketide-2 biosynthetic gene cluster
          Length = 27522

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 201  cgagctggccgggctgcccg 220
            ||||||||||||||||||||
Sbjct: 6837 cgagctggccgggctgcccg 6818


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 85,469,343
Number of extensions: 4433265
Number of successful extensions: 79396
Number of sequences better than 10.0: 33
Number of HSP's gapped: 79396
Number of HSP's successfully gapped: 34
Length of query: 578
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 556
Effective length of database: 18,508,616,841
Effective search space: 10290790963596
Effective search space used: 10290790963596
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)