ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf168e24 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT831581.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA031O13, full insert sequence Length = 1498 Score = 234 bits (118), Expect = 7e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 ||||||||||||||||||||||| || ||||| ||||||||| ||| |||||| || || Sbjct: 676 ctgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccct 735 Query: 754 cacatcaagtgcactgtgttggaccttccaaaggtggtcgaaaaagccccagctgatgga 813 || |||||||||||||| |||||||||| |||||| |||| || || || |||||| Sbjct: 736 catgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggt 795 Query: 814 gtcattaactatgtcgcgggtgacctgttccacaccgtcccaccatctcgagtggtgatg 873 ||| |||||||||| || |||||| ||||||||||||| ||||| ||| || |||||| Sbjct: 796 gtcgttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatg 855 Query: 874 ctcaagcttgtgctacacttttggagtgatgaggattgcgtgaaaatcctagcccagtgc 933 ||||||||||| | ||| ||||| ||||| ||||||||||| ||| | | |||||| Sbjct: 856 ctcaagcttgtattgcaccactggagcgatgatgattgcgtgaagatcttgactcagtgc 915 Query: 934 agaaaggccattcctccgcgggaggaggggggaaaggtaataatcatagagattgtggtt 993 |||||||||||||| | || |||||||| || ||||| || ||||||||||| ||||| Sbjct: 916 agaaaggccattccatcacgagaggagggagggaaggtcatcatcatagagatactggtt 975 Query: 994 ggaccttccttagggccagtaatgtttgaagcccaactcctgatggatatgctcatgatg 1053 |||||||| |||| |||||||||||||||||||| || ||||||||||||| ||| || Sbjct: 976 ggaccttcactaggaccagtaatgtttgaagcccagctgatgatggatatgctgatgttg 1035 Query: 1054 gt 1055 || Sbjct: 1036 gt 1037 Score = 107 bits (54), Expect = 1e-19 Identities = 114/134 (85%) Strand = Plus / Plus Query: 93 gaggttcccgcggacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctc 152 ||||||||| | ||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 79 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 138 Query: 153 tactacctctcctccatggcgctccggtgcgccgtcgagctcgagatcccgactgcgatc 212 ||||||||| |||||| || ||||| |||||| || |||| | ||||| || || ||| Sbjct: 139 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatc 198 Query: 213 caccgcctaggcgg 226 |||||||| ||||| Sbjct: 199 caccgcctcggcgg 212
>ref|NM_001074280.1| Oryza sativa (japonica cultivar-group) Os11g0306400 (Os11g0306400) mRNA, complete cds Length = 1362 Score = 234 bits (118), Expect = 7e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 ||||||||||||||||||||||| || ||||| ||||||||| ||| |||||| || || Sbjct: 672 ctgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccct 731 Query: 754 cacatcaagtgcactgtgttggaccttccaaaggtggtcgaaaaagccccagctgatgga 813 || |||||||||||||| |||||||||| |||||| |||| || || || |||||| Sbjct: 732 catgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggt 791 Query: 814 gtcattaactatgtcgcgggtgacctgttccacaccgtcccaccatctcgagtggtgatg 873 ||| |||||||||| || |||||| ||||||||||||| ||||| ||| || |||||| Sbjct: 792 gtcgttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatg 851 Query: 874 ctcaagcttgtgctacacttttggagtgatgaggattgcgtgaaaatcctagcccagtgc 933 ||||||||||| | ||| ||||| ||||| ||||||||||| ||| | | |||||| Sbjct: 852 ctcaagcttgtattgcaccactggagcgatgatgattgcgtgaagatcttgactcagtgc 911 Query: 934 agaaaggccattcctccgcgggaggaggggggaaaggtaataatcatagagattgtggtt 993 |||||||||||||| | || |||||||| || ||||| || ||||||||||| ||||| Sbjct: 912 agaaaggccattccatcacgagaggagggagggaaggtcatcatcatagagatactggtt 971 Query: 994 ggaccttccttagggccagtaatgtttgaagcccaactcctgatggatatgctcatgatg 1053 |||||||| |||| |||||||||||||||||||| || ||||||||||||| ||| || Sbjct: 972 ggaccttcactaggaccagtaatgtttgaagcccagctgatgatggatatgctgatgttg 1031 Query: 1054 gt 1055 || Sbjct: 1032 gt 1033 Score = 107 bits (54), Expect = 1e-19 Identities = 114/134 (85%) Strand = Plus / Plus Query: 93 gaggttcccgcggacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctc 152 ||||||||| | ||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 75 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 134 Query: 153 tactacctctcctccatggcgctccggtgcgccgtcgagctcgagatcccgactgcgatc 212 ||||||||| |||||| || ||||| |||||| || |||| | ||||| || || ||| Sbjct: 135 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatc 194 Query: 213 caccgcctaggcgg 226 |||||||| ||||| Sbjct: 195 caccgcctcggcgg 208
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 234 bits (118), Expect = 7e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 ||||||||||||||||||||||| || ||||| ||||||||| ||| |||||| || || Sbjct: 672 ctgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccct 731 Query: 754 cacatcaagtgcactgtgttggaccttccaaaggtggtcgaaaaagccccagctgatgga 813 || |||||||||||||| |||||||||| |||||| |||| || || || |||||| Sbjct: 732 catgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggt 791 Query: 814 gtcattaactatgtcgcgggtgacctgttccacaccgtcccaccatctcgagtggtgatg 873 ||| |||||||||| || |||||| ||||||||||||| ||||| ||| || |||||| Sbjct: 792 gtcgttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatg 851 Query: 874 ctcaagcttgtgctacacttttggagtgatgaggattgcgtgaaaatcctagcccagtgc 933 ||||||||||| | ||| ||||| ||||| ||||||||||| ||| | | |||||| Sbjct: 852 ctcaagcttgtattgcaccactggagcgatgatgattgcgtgaagatcttgactcagtgc 911 Query: 934 agaaaggccattcctccgcgggaggaggggggaaaggtaataatcatagagattgtggtt 993 |||||||||||||| | || |||||||| || ||||| || ||||||||||| ||||| Sbjct: 912 agaaaggccattccatcacgagaggagggagggaaggtcatcatcatagagatactggtt 971 Query: 994 ggaccttccttagggccagtaatgtttgaagcccaactcctgatggatatgctcatgatg 1053 |||||||| |||| |||||||||||||||||||| || ||||||||||||| ||| || Sbjct: 972 ggaccttcactaggaccagtaatgtttgaagcccagctgatgatggatatgctgatgttg 1031 Query: 1054 gt 1055 || Sbjct: 1032 gt 1033 Score = 107 bits (54), Expect = 1e-19 Identities = 114/134 (85%) Strand = Plus / Plus Query: 93 gaggttcccgcggacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctc 152 ||||||||| | ||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 75 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 134 Query: 153 tactacctctcctccatggcgctccggtgcgccgtcgagctcgagatcccgactgcgatc 212 ||||||||| |||||| || ||||| |||||| || |||| | ||||| || || ||| Sbjct: 135 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatc 194 Query: 213 caccgcctaggcgg 226 |||||||| ||||| Sbjct: 195 caccgcctcggcgg 208
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 234 bits (118), Expect = 7e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 ||||||||||||||||||||||| || ||||| ||||||||| ||| |||||| || || Sbjct: 677 ctgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccct 736 Query: 754 cacatcaagtgcactgtgttggaccttccaaaggtggtcgaaaaagccccagctgatgga 813 || |||||||||||||| |||||||||| |||||| |||| || || || |||||| Sbjct: 737 catgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggt 796 Query: 814 gtcattaactatgtcgcgggtgacctgttccacaccgtcccaccatctcgagtggtgatg 873 ||| |||||||||| || |||||| ||||||||||||| ||||| ||| || |||||| Sbjct: 797 gtcgttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatg 856 Query: 874 ctcaagcttgtgctacacttttggagtgatgaggattgcgtgaaaatcctagcccagtgc 933 ||||||||||| | ||| ||||| ||||| ||||||||||| ||| | | |||||| Sbjct: 857 ctcaagcttgtattgcaccactggagcgatgatgattgcgtgaagatcttgactcagtgc 916 Query: 934 agaaaggccattcctccgcgggaggaggggggaaaggtaataatcatagagattgtggtt 993 |||||||||||||| | || |||||||| || ||||| || ||||||||||| ||||| Sbjct: 917 agaaaggccattccatcacgagaggagggagggaaggtcatcatcatagagatactggtt 976 Query: 994 ggaccttccttagggccagtaatgtttgaagcccaactcctgatggatatgctcatgatg 1053 |||||||| |||| |||||||||||||||||||| || ||||||||||||| ||| || Sbjct: 977 ggaccttcactaggaccagtaatgtttgaagcccagctgatgatggatatgctgatgttg 1036 Query: 1054 gt 1055 || Sbjct: 1037 gt 1038 Score = 107 bits (54), Expect = 1e-19 Identities = 114/134 (85%) Strand = Plus / Plus Query: 93 gaggttcccgcggacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctc 152 ||||||||| | ||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 80 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 139 Query: 153 tactacctctcctccatggcgctccggtgcgccgtcgagctcgagatcccgactgcgatc 212 ||||||||| |||||| || ||||| |||||| || |||| | ||||| || || ||| Sbjct: 140 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatc 199 Query: 213 caccgcctaggcgg 226 |||||||| ||||| Sbjct: 200 caccgcctcggcgg 213
>gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full insert mRNA sequence Length = 770 Score = 167 bits (84), Expect = 1e-37 Identities = 183/216 (84%) Strand = Plus / Plus Query: 697 accgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccgcac 756 ||||||||||| || || ||||| ||||| || |||||| |||||||||| | ||||| Sbjct: 33 accgactgctgtggtggtgatgggacgaccgcaagggccatcgtcaaggccttcccgcat 92 Query: 757 atcaagtgcactgtgttggaccttccaaaggtggtcgaaaaagccccagctgatggagtc 816 |||||||||| |||||||||||||||||||||| |||| |||| |||| |||||| || Sbjct: 93 atcaagtgcaatgtgttggaccttccaaaggtgatcgagaaagtcccaagtgatggtgtt 152 Query: 817 attaactatgtcgcgggtgacctgttccacaccgtcccaccatctcgagtggtgatgctc 876 ||||||||||||| |||||||| ||||| |||||||||||| ||| | || |||||| Sbjct: 153 gttaactatgtcgctggtgacctcttccataccgtcccaccagctcaggccgtcatgctc 212 Query: 877 aagcttgtgctacacttttggagtgatgaggattgc 912 |||||||| |||||||| ||||| || ||||||||| Sbjct: 213 aagcttgttctacacttctggagcgacgaggattgc 248
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 147 bits (74), Expect = 1e-31 Identities = 146/170 (85%) Strand = Plus / Plus Query: 96 gttcccgcggacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctctac 155 |||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 60 gttcccacggacgccgagctgctgcaggcgcaggccgacctgtggcgccacagcctctac 119 Query: 156 tacctctcctccatggcgctccggtgcgccgtcgagctcgagatcccgactgcgatccac 215 ||||| | |||||||||||| |||||| || |||||| | |||||||| || |||||| Sbjct: 120 tacctgacatccatggcgctcaagtgcgcggtggagctccacatcccgaccgccatccac 179 Query: 216 cgcctaggcggggtcgcctcgctgcccgacctgatggccgcgctgtccct 265 |||||||||| ||| ||||||| ||||| |||||||||||||||| Sbjct: 180 aacctaggcgggtctgccacgctgccggacctcgtggccgcgctgtccct 229 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1024 gcccaactcctgatggatatgctcatgatggtgaacac 1061 ||||| || |||||||| |||||||||||||||||||| Sbjct: 954 gcccagctgctgatggacatgctcatgatggtgaacac 991
>dbj|AK240736.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J043034A04, full insert sequence Length = 1528 Score = 133 bits (67), Expect = 2e-27 Identities = 133/155 (85%) Strand = Plus / Plus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 170 |||||| |||| |||||||| |||||||||||||||||||||||||||||| | |||||| Sbjct: 122 gagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcacgtccatg 181 Query: 171 gcgctccggtgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcggggtc 230 | ||||| |||||||||||||||| |||||||| ||||||| |||| ||||| | | Sbjct: 182 ggcctccgctgcgccgtcgagctcggcatcccgaccacgatccatggcctcggcggcgcc 241 Query: 231 gcctcgctgcccgacctgatggccgcgctgtccct 265 ||| | | || ||||||||||||||||||||||| Sbjct: 242 gccaccgtccctgacctgatggccgcgctgtccct 276 Score = 85.7 bits (43), Expect = 4e-13 Identities = 136/167 (81%) Strand = Plus / Plus Query: 910 tgcgtgaaaatcctagcccagtgcagaaaggccattcctccgcgggaggaggggggaaag 969 |||||||| |||||||| ||||||| |||||| |||||| | || ||||||| || ||| Sbjct: 917 tgcgtgaagatcctagctcagtgcaaaaaggctattccttcacgaaaggagggcgggaag 976 Query: 970 gtaataatcatagagattgtggttggaccttccttagggccagtaatgtttgaagcccaa 1029 | || ||||||| || |||||| ||| || || ||||| |||||||| ||||| || Sbjct: 977 ttgattgtcatagatatcttggttgaaccatctttggggcctgtaatgttcgaagcgcag 1036 Query: 1030 ctcctgatggatatgctcatgatggtgaacacgagagggggtcaacg 1076 ||| ||||||| ||||||||||||||||| || ||||| ||||||| Sbjct: 1037 ctcatgatggacatgctcatgatggtgaatactagaggtcgtcaacg 1083 Score = 83.8 bits (42), Expect = 2e-12 Identities = 78/90 (86%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 |||||||||||||||||| || | || | || ||||||||| |||||||||| || ||| Sbjct: 698 ctgaccgactgctgcggccgccacggcgccacggcgagggccatcgtcaaggcgtacccg 757 Query: 754 cacatcaagtgcactgtgttggaccttcca 783 |||||||||||||| ||| ||||||||||| Sbjct: 758 cacatcaagtgcacggtgctggaccttcca 787 Score = 46.1 bits (23), Expect = 0.36 Identities = 53/63 (84%) Strand = Plus / Plus Query: 368 ccgcctcaccccattgtcccgcgttctggtgcacggcgtcctagcggacgagcaccatag 427 ||||||||| || |||||||| | ||||| |||||||| | || |||||||||||||| Sbjct: 373 ccgcctcactccgctgtcccgcatcctggttgacggcgtcgtcgccgacgagcaccatag 432 Query: 428 cca 430 ||| Sbjct: 433 cca 435
>ref|NM_001074281.1| Oryza sativa (japonica cultivar-group) Os11g0307300 (Os11g0307300) mRNA, complete cds Length = 1107 Score = 133 bits (67), Expect = 2e-27 Identities = 133/155 (85%) Strand = Plus / Plus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 170 |||||| |||| |||||||| |||||||||||||||||||||||||||||| | |||||| Sbjct: 43 gagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcacgtccatg 102 Query: 171 gcgctccggtgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcggggtc 230 | ||||| |||||||||||||||| |||||||| ||||||| |||| ||||| | | Sbjct: 103 ggcctccgctgcgccgtcgagctcggcatcccgaccacgatccatggcctcggcggcgcc 162 Query: 231 gcctcgctgcccgacctgatggccgcgctgtccct 265 ||| | | || ||||||||||||||||||||||| Sbjct: 163 gccaccgtccctgacctgatggccgcgctgtccct 197 Score = 85.7 bits (43), Expect = 4e-13 Identities = 136/167 (81%) Strand = Plus / Plus Query: 910 tgcgtgaaaatcctagcccagtgcagaaaggccattcctccgcgggaggaggggggaaag 969 |||||||| |||||||| ||||||| |||||| |||||| | || ||||||| || ||| Sbjct: 838 tgcgtgaagatcctagctcagtgcaaaaaggctattccttcacgaaaggagggcgggaag 897 Query: 970 gtaataatcatagagattgtggttggaccttccttagggccagtaatgtttgaagcccaa 1029 | || ||||||| || |||||| ||| || || ||||| |||||||| ||||| || Sbjct: 898 ttgattgtcatagatatcttggttgaaccatctttggggcctgtaatgttcgaagcgcag 957 Query: 1030 ctcctgatggatatgctcatgatggtgaacacgagagggggtcaacg 1076 ||| ||||||| ||||||||||||||||| || ||||| ||||||| Sbjct: 958 ctcatgatggacatgctcatgatggtgaatactagaggtcgtcaacg 1004 Score = 83.8 bits (42), Expect = 2e-12 Identities = 78/90 (86%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 |||||||||||||||||| || | || | || ||||||||| |||||||||| || ||| Sbjct: 619 ctgaccgactgctgcggccgccacggcgccacggcgagggccatcgtcaaggcgtacccg 678 Query: 754 cacatcaagtgcactgtgttggaccttcca 783 |||||||||||||| ||| ||||||||||| Sbjct: 679 cacatcaagtgcacggtgctggaccttcca 708 Score = 46.1 bits (23), Expect = 0.36 Identities = 53/63 (84%) Strand = Plus / Plus Query: 368 ccgcctcaccccattgtcccgcgttctggtgcacggcgtcctagcggacgagcaccatag 427 ||||||||| || |||||||| | ||||| |||||||| | || |||||||||||||| Sbjct: 294 ccgcctcactccgctgtcccgcatcctggttgacggcgtcgtcgccgacgagcaccatag 353 Query: 428 cca 430 ||| Sbjct: 354 cca 356
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 133 bits (67), Expect = 2e-27 Identities = 133/155 (85%) Strand = Plus / Plus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 170 |||||| |||| |||||||| |||||||||||||||||||||||||||||| | |||||| Sbjct: 63237 gagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcacgtccatg 63296 Query: 171 gcgctccggtgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcggggtc 230 | ||||| |||||||||||||||| |||||||| ||||||| |||| ||||| | | Sbjct: 63297 ggcctccgctgcgccgtcgagctcggcatcccgaccacgatccatggcctcggcggcgcc 63356 Query: 231 gcctcgctgcccgacctgatggccgcgctgtccct 265 ||| | | || ||||||||||||||||||||||| Sbjct: 63357 gccaccgtccctgacctgatggccgcgctgtccct 63391 Score = 131 bits (66), Expect = 8e-27 Identities = 156/186 (83%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 ||||||||||||||||||||||| || ||||| ||||||||| ||| |||||| || || Sbjct: 119512 ctgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccct 119571 Query: 754 cacatcaagtgcactgtgttggaccttccaaaggtggtcgaaaaagccccagctgatgga 813 || |||||||||||||| |||||||||| |||||| |||| || || || |||||| Sbjct: 119572 catgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggt 119631 Query: 814 gtcattaactatgtcgcgggtgacctgttccacaccgtcccaccatctcgagtggtgatg 873 ||| |||||||||| || |||||| ||||||||||||| ||||| ||| || |||||| Sbjct: 119632 gtcgttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatg 119691 Query: 874 ctcaag 879 |||||| Sbjct: 119692 ctcaag 119697 Score = 121 bits (61), Expect = 8e-24 Identities = 136/161 (84%) Strand = Plus / Plus Query: 895 tggagtgatgaggattgcgtgaaaatcctagcccagtgcagaaaggccattcctccgcgg 954 ||||| ||||| ||||||||||| ||| | | |||||||||||||||||||| | || Sbjct: 122880 tggagcgatgatgattgcgtgaagatcttgactcagtgcagaaaggccattccatcacga 122939 Query: 955 gaggaggggggaaaggtaataatcatagagattgtggttggaccttccttagggccagta 1014 |||||||| || ||||| || ||||||||||| ||||||||||||| |||| |||||| Sbjct: 122940 gaggagggagggaaggtcatcatcatagagatactggttggaccttcactaggaccagta 122999 Query: 1015 atgtttgaagcccaactcctgatggatatgctcatgatggt 1055 |||||||||||||| || ||||||||||||| ||| |||| Sbjct: 123000 atgtttgaagcccagctgatgatggatatgctgatgttggt 123040 Score = 117 bits (59), Expect = 1e-22 Identities = 95/107 (88%) Strand = Plus / Minus Query: 120 caggcacaggcagacctgtggcgccacagcctctactacctctcctccatggcgctccgg 179 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131497 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 131438 Query: 180 tgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcgg 226 ||||||||| |||||| ||||| || | ||||||||||| ||||| Sbjct: 131437 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcgg 131391 Score = 107 bits (54), Expect = 1e-19 Identities = 114/134 (85%) Strand = Plus / Plus Query: 93 gaggttcccgcggacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctc 152 ||||||||| | ||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 118915 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 118974 Query: 153 tactacctctcctccatggcgctccggtgcgccgtcgagctcgagatcccgactgcgatc 212 ||||||||| |||||| || ||||| |||||| || |||| | ||||| || || ||| Sbjct: 118975 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatc 119034 Query: 213 caccgcctaggcgg 226 |||||||| ||||| Sbjct: 119035 caccgcctcggcgg 119048 Score = 85.7 bits (43), Expect = 4e-13 Identities = 136/167 (81%) Strand = Plus / Plus Query: 910 tgcgtgaaaatcctagcccagtgcagaaaggccattcctccgcgggaggaggggggaaag 969 |||||||| |||||||| ||||||| |||||| |||||| | || ||||||| || ||| Sbjct: 64209 tgcgtgaagatcctagctcagtgcaaaaaggctattccttcacgaaaggagggcgggaag 64268 Query: 970 gtaataatcatagagattgtggttggaccttccttagggccagtaatgtttgaagcccaa 1029 | || ||||||| || |||||| ||| || || ||||| |||||||| ||||| || Sbjct: 64269 ttgattgtcatagatatcttggttgaaccatctttggggcctgtaatgttcgaagcgcag 64328 Query: 1030 ctcctgatggatatgctcatgatggtgaacacgagagggggtcaacg 1076 ||| ||||||| ||||||||||||||||| || ||||| ||||||| Sbjct: 64329 ctcatgatggacatgctcatgatggtgaatactagaggtcgtcaacg 64375 Score = 83.8 bits (42), Expect = 2e-12 Identities = 78/90 (86%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 |||||||||||||||||| || | || | || ||||||||| |||||||||| || ||| Sbjct: 63813 ctgaccgactgctgcggccgccacggcgccacggcgagggccatcgtcaaggcgtacccg 63872 Query: 754 cacatcaagtgcactgtgttggaccttcca 783 |||||||||||||| ||| ||||||||||| Sbjct: 63873 cacatcaagtgcacggtgctggaccttcca 63902 Score = 46.1 bits (23), Expect = 0.36 Identities = 53/63 (84%) Strand = Plus / Plus Query: 368 ccgcctcaccccattgtcccgcgttctggtgcacggcgtcctagcggacgagcaccatag 427 ||||||||| || |||||||| | ||||| |||||||| | || |||||||||||||| Sbjct: 63488 ccgcctcactccgctgtcccgcatcctggttgacggcgtcgtcgccgacgagcaccatag 63547 Query: 428 cca 430 ||| Sbjct: 63548 cca 63550
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 133 bits (67), Expect = 2e-27 Identities = 133/155 (85%) Strand = Plus / Minus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 170 |||||| |||| |||||||| |||||||||||||||||||||||||||||| | |||||| Sbjct: 11550551 gagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcacgtccatg 11550492 Query: 171 gcgctccggtgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcggggtc 230 | ||||| |||||||||||||||| |||||||| ||||||| |||| ||||| | | Sbjct: 11550491 ggcctccgctgcgccgtcgagctcggcatcccgaccacgatccatggcctcggcggcgcc 11550432 Query: 231 gcctcgctgcccgacctgatggccgcgctgtccct 265 ||| | | || ||||||||||||||||||||||| Sbjct: 11550431 gccaccgtccctgacctgatggccgcgctgtccct 11550397 Score = 131 bits (66), Expect = 8e-27 Identities = 156/186 (83%) Strand = Plus / Minus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 ||||||||||||||||||||||| || ||||| ||||||||| ||| |||||| || || Sbjct: 11494276 ctgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccct 11494217 Query: 754 cacatcaagtgcactgtgttggaccttccaaaggtggtcgaaaaagccccagctgatgga 813 || |||||||||||||| |||||||||| |||||| |||| || || || |||||| Sbjct: 11494216 catgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggt 11494157 Query: 814 gtcattaactatgtcgcgggtgacctgttccacaccgtcccaccatctcgagtggtgatg 873 ||| |||||||||| || |||||| ||||||||||||| ||||| ||| || |||||| Sbjct: 11494156 gtcgttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatg 11494097 Query: 874 ctcaag 879 |||||| Sbjct: 11494096 ctcaag 11494091 Score = 121 bits (61), Expect = 8e-24 Identities = 136/161 (84%) Strand = Plus / Minus Query: 895 tggagtgatgaggattgcgtgaaaatcctagcccagtgcagaaaggccattcctccgcgg 954 ||||| ||||| ||||||||||| ||| | | |||||||||||||||||||| | || Sbjct: 11490908 tggagcgatgatgattgcgtgaagatcttgactcagtgcagaaaggccattccatcacga 11490849 Query: 955 gaggaggggggaaaggtaataatcatagagattgtggttggaccttccttagggccagta 1014 |||||||| || ||||| || ||||||||||| ||||||||||||| |||| |||||| Sbjct: 11490848 gaggagggagggaaggtcatcatcatagagatactggttggaccttcactaggaccagta 11490789 Query: 1015 atgtttgaagcccaactcctgatggatatgctcatgatggt 1055 |||||||||||||| || ||||||||||||| ||| |||| Sbjct: 11490788 atgtttgaagcccagctgatgatggatatgctgatgttggt 11490748 Score = 117 bits (59), Expect = 1e-22 Identities = 95/107 (88%) Strand = Plus / Plus Query: 120 caggcacaggcagacctgtggcgccacagcctctactacctctcctccatggcgctccgg 179 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 11482291 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11482350 Query: 180 tgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcgg 226 ||||||||| |||||| ||||| || | ||||||||||| ||||| Sbjct: 11482351 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcgg 11482397 Score = 113 bits (57), Expect = 2e-21 Identities = 114/133 (85%) Strand = Plus / Minus Query: 94 aggttcccgcggacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctct 153 |||||||| | ||||||||||||||||| |||||||| ||||| |||||||||||| ||| Sbjct: 7139018 aggttcccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttct 7138959 Query: 154 actacctctcctccatggcgctccggtgcgccgtcgagctcgagatcccgactgcgatcc 213 ||||||| | ||||||||||||| ||||||| | |||||| ||||| || || |||| Sbjct: 7138958 cctacctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatcc 7138899 Query: 214 accgcctaggcgg 226 ||||||| ||||| Sbjct: 7138898 accgcctcggcgg 7138886 Score = 107 bits (54), Expect = 1e-19 Identities = 114/134 (85%) Strand = Plus / Minus Query: 93 gaggttcccgcggacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctc 152 ||||||||| | ||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 11494873 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 11494814 Query: 153 tactacctctcctccatggcgctccggtgcgccgtcgagctcgagatcccgactgcgatc 212 ||||||||| |||||| || ||||| |||||| || |||| | ||||| || || ||| Sbjct: 11494813 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatc 11494754 Query: 213 caccgcctaggcgg 226 |||||||| ||||| Sbjct: 11494753 caccgcctcggcgg 11494740 Score = 103 bits (52), Expect = 2e-18 Identities = 118/140 (84%) Strand = Plus / Minus Query: 126 caggcagacctgtggcgccacagcctctactacctctcctccatggcgctccggtgcgcc 185 ||||| || ||||||||||||| ||||| ||||||| |||||||| | |||||||||||| Sbjct: 11303032 caggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgcc 11302973 Query: 186 gtcgagctcgagatcccgactgcgatccaccgcctaggcggggtcgcctcgctgcccgac 245 ||| | |||| ||||| || || |||||||||| ||||| | |||||||||||||||| Sbjct: 11302972 gtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgac 11302913 Query: 246 ctgatggccgcgctgtccct 265 || | ||||||||||||| Sbjct: 11302912 ctcgtcaccgcgctgtccct 11302893 Score = 101 bits (51), Expect = 7e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 170 ||||||||||| || ||||| ||||||||||||||||||||||||| | || | |||||| Sbjct: 11331655 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 11331596 Query: 171 gcgctccggtgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcggggtc 230 ||| ||| |||||||||| |||||| ||||| || || ||||||||| || || | Sbjct: 11331595 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 11331536 Query: 231 gcctcgctgcccgacctgatggccgcgctgtccct 265 ||||||||||||||||| | ||||| |||||||| Sbjct: 11331535 gcctcgctgcccgaccttgtcgccgccctgtccct 11331501 Score = 85.7 bits (43), Expect = 4e-13 Identities = 136/167 (81%) Strand = Plus / Minus Query: 910 tgcgtgaaaatcctagcccagtgcagaaaggccattcctccgcgggaggaggggggaaag 969 |||||||| |||||||| ||||||| |||||| |||||| | || ||||||| || ||| Sbjct: 11549579 tgcgtgaagatcctagctcagtgcaaaaaggctattccttcacgaaaggagggcgggaag 11549520 Query: 970 gtaataatcatagagattgtggttggaccttccttagggccagtaatgtttgaagcccaa 1029 | || ||||||| || |||||| ||| || || ||||| |||||||| ||||| || Sbjct: 11549519 ttgattgtcatagatatcttggttgaaccatctttggggcctgtaatgttcgaagcgcag 11549460 Query: 1030 ctcctgatggatatgctcatgatggtgaacacgagagggggtcaacg 1076 ||| ||||||| ||||||||||||||||| || ||||| ||||||| Sbjct: 11549459 ctcatgatggacatgctcatgatggtgaatactagaggtcgtcaacg 11549413 Score = 83.8 bits (42), Expect = 2e-12 Identities = 78/90 (86%) Strand = Plus / Minus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 |||||||||||||||||| || | || | || ||||||||| |||||||||| || ||| Sbjct: 11549975 ctgaccgactgctgcggccgccacggcgccacggcgagggccatcgtcaaggcgtacccg 11549916 Query: 754 cacatcaagtgcactgtgttggaccttcca 783 |||||||||||||| ||| ||||||||||| Sbjct: 11549915 cacatcaagtgcacggtgctggaccttcca 11549886 Score = 81.8 bits (41), Expect = 7e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 170 ||||||||||| || ||||| ||| ||| ||||||||||||||||| | || | |||||| Sbjct: 11355303 gagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccatg 11355244 Query: 171 gcgctccggtgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcggggtc 230 ||| | | |||||||||| |||||| ||||| || || ||||||||| ||||| | Sbjct: 11355243 gcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcacc 11355184 Query: 231 gcctcgctgcccgacct 247 ||||||||||||||||| Sbjct: 11355183 gcctcgctgcccgacct 11355167 Score = 61.9 bits (31), Expect = 6e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 680 aggggcttgactccctgaccgactgctgcggcggcgatggtacgacagcgagggccctcg 739 ||||||| || || ||||| |||||| |||||||||| || |||| |||||| || ||| Sbjct: 11439033 aggggctggagtcgctgacagactgcggcggcggcgacggcgcgacggcgaggaccatcg 11438974 Query: 740 tcaaggcttatccgcacatcaagtgcactgtgttggaccttcc 782 || |||| | || ||| |||||||||||||| |||||||||| Sbjct: 11438973 tcgaggccttcccacacgtcaagtgcactgtgctggaccttcc 11438931 Score = 58.0 bits (29), Expect = 9e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 |||||||||||| ||||||||| || |||| ||||||||| ||| | ||| | ||| Sbjct: 7138395 ctgaccgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccg 7138336 Query: 754 cacatcaagtgcactgtgttggaccttccaaaggtggtcga 794 |||||||||||||| ||| ||||||| || |||||| |||| Sbjct: 7138335 cacatcaagtgcacggtgctggacctcccgaaggtgatcga 7138295 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactac 158 ||||||||||| |||||||| || || |||||||||||||||| |||| Sbjct: 11439601 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctac 11439554 Score = 50.1 bits (25), Expect = 0.023 Identities = 31/33 (93%) Strand = Plus / Minus Query: 894 ttggagtgatgaggattgcgtgaaaatcctagc 926 ||||||||| |||||||||||||||||||||| Sbjct: 11437519 ttggagtgaccaggattgcgtgaaaatcctagc 11437487 Score = 48.1 bits (24), Expect = 0.091 Identities = 48/56 (85%) Strand = Plus / Minus Query: 1123 gactacaaaattgtgaagaaattgggagcccgatcagtcatcgaggtctacccgta 1178 |||||||| |||||||||||||||||| | || | ||||| |||||||| ||||| Sbjct: 11294583 gactacaagattgtgaagaaattgggacctcggtgtgtcattgaggtctatccgta 11294528 Score = 48.1 bits (24), Expect = 0.091 Identities = 60/72 (83%) Strand = Plus / Minus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 |||||||||||| |||||||||| || ||| | ||||||||| ||| | |||| | ||| Sbjct: 11302462 ctgaccgactgcggcggcggcgacggcacggcggcgagggccatcgccgaggccttcccg 11302403 Query: 754 cacatcaagtgc 765 ||| |||||||| Sbjct: 11302402 cacgtcaagtgc 11302391 Score = 46.1 bits (23), Expect = 0.36 Identities = 50/59 (84%) Strand = Plus / Minus Query: 1117 ttcactgactacaaaattgtgaagaaattgggagcccgatcagtcatcgaggtctaccc 1175 |||| ||||||||| |||||||||||| ||||||| ||| ||| | ||||||||||| Sbjct: 11353947 ttcagtgactacaatattgtgaagaaactgggagctcgaggcgtctttgaggtctaccc 11353889 Score = 46.1 bits (23), Expect = 0.36 Identities = 53/63 (84%) Strand = Plus / Minus Query: 368 ccgcctcaccccattgtcccgcgttctggtgcacggcgtcctagcggacgagcaccatag 427 ||||||||| || |||||||| | ||||| |||||||| | || |||||||||||||| Sbjct: 11550300 ccgcctcactccgctgtcccgcatcctggttgacggcgtcgtcgccgacgagcaccatag 11550241 Query: 428 cca 430 ||| Sbjct: 11550240 cca 11550238 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 694 ctgaccgactgctgcggcggcgatgg 719 |||||||||||| ||||||||||||| Sbjct: 11331058 ctgaccgactgccgcggcggcgatgg 11331033 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 aaccaagaaagggagagagag 66 ||||||||||||||||||||| Sbjct: 19689404 aaccaagaaagggagagagag 19689424
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 131 bits (66), Expect = 8e-27 Identities = 156/186 (83%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 ||||||||||||||||||||||| || ||||| ||||||||| ||| |||||| || || Sbjct: 5261 ctgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccct 5320 Query: 754 cacatcaagtgcactgtgttggaccttccaaaggtggtcgaaaaagccccagctgatgga 813 || |||||||||||||| |||||||||| |||||| |||| || || || |||||| Sbjct: 5321 catgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggt 5380 Query: 814 gtcattaactatgtcgcgggtgacctgttccacaccgtcccaccatctcgagtggtgatg 873 ||| |||||||||| || |||||| ||||||||||||| ||||| ||| || |||||| Sbjct: 5381 gtcgttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatg 5440 Query: 874 ctcaag 879 |||||| Sbjct: 5441 ctcaag 5446 Score = 121 bits (61), Expect = 8e-24 Identities = 136/161 (84%) Strand = Plus / Plus Query: 895 tggagtgatgaggattgcgtgaaaatcctagcccagtgcagaaaggccattcctccgcgg 954 ||||| ||||| ||||||||||| ||| | | |||||||||||||||||||| | || Sbjct: 8629 tggagcgatgatgattgcgtgaagatcttgactcagtgcagaaaggccattccatcacga 8688 Query: 955 gaggaggggggaaaggtaataatcatagagattgtggttggaccttccttagggccagta 1014 |||||||| || ||||| || ||||||||||| ||||||||||||| |||| |||||| Sbjct: 8689 gaggagggagggaaggtcatcatcatagagatactggttggaccttcactaggaccagta 8748 Query: 1015 atgtttgaagcccaactcctgatggatatgctcatgatggt 1055 |||||||||||||| || ||||||||||||| ||| |||| Sbjct: 8749 atgtttgaagcccagctgatgatggatatgctgatgttggt 8789 Score = 117 bits (59), Expect = 1e-22 Identities = 95/107 (88%) Strand = Plus / Minus Query: 120 caggcacaggcagacctgtggcgccacagcctctactacctctcctccatggcgctccgg 179 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 17246 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 17187 Query: 180 tgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcgg 226 ||||||||| |||||| ||||| || | ||||||||||| ||||| Sbjct: 17186 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcgg 17140 Score = 107 bits (54), Expect = 1e-19 Identities = 114/134 (85%) Strand = Plus / Plus Query: 93 gaggttcccgcggacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctc 152 ||||||||| | ||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 4664 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 4723 Query: 153 tactacctctcctccatggcgctccggtgcgccgtcgagctcgagatcccgactgcgatc 212 ||||||||| |||||| || ||||| |||||| || |||| | ||||| || || ||| Sbjct: 4724 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatc 4783 Query: 213 caccgcctaggcgg 226 |||||||| ||||| Sbjct: 4784 caccgcctcggcgg 4797 Score = 61.9 bits (31), Expect = 6e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 680 aggggcttgactccctgaccgactgctgcggcggcgatggtacgacagcgagggccctcg 739 ||||||| || || ||||| |||||| |||||||||| || |||| |||||| || ||| Sbjct: 60504 aggggctggagtcgctgacagactgcggcggcggcgacggcgcgacggcgaggaccatcg 60563 Query: 740 tcaaggcttatccgcacatcaagtgcactgtgttggaccttcc 782 || |||| | || ||| |||||||||||||| |||||||||| Sbjct: 60564 tcgaggccttcccacacgtcaagtgcactgtgctggaccttcc 60606 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactac 158 ||||||||||| |||||||| || || |||||||||||||||| |||| Sbjct: 59936 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctac 59983 Score = 50.1 bits (25), Expect = 0.023 Identities = 31/33 (93%) Strand = Plus / Plus Query: 894 ttggagtgatgaggattgcgtgaaaatcctagc 926 ||||||||| |||||||||||||||||||||| Sbjct: 62018 ttggagtgaccaggattgcgtgaaaatcctagc 62050
>emb|CT834734.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120J19, full insert sequence Length = 1398 Score = 125 bits (63), Expect = 5e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 120 caggcacaggcagacctgtggcgccacagcctctactacctctcctccatggcgctccgg 179 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 108 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 167 Query: 180 tgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcgg 226 ||||||||| |||||| ||||| || || ||||||||||| ||||| Sbjct: 168 tgcgccgtcaagctcggcatccccacagccatccaccgcctcggcgg 214
>emb|CT831313.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120C08, full insert sequence Length = 1394 Score = 125 bits (63), Expect = 5e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 120 caggcacaggcagacctgtggcgccacagcctctactacctctcctccatggcgctccgg 179 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 108 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 167 Query: 180 tgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcgg 226 ||||||||| |||||| ||||| || || ||||||||||| ||||| Sbjct: 168 tgcgccgtcaagctcggcatccccacagccatccaccgcctcggcgg 214
>ref|NM_001074279.1| Oryza sativa (japonica cultivar-group) Os11g0306300 (Os11g0306300) mRNA, complete cds Length = 1300 Score = 117 bits (59), Expect = 1e-22 Identities = 95/107 (88%) Strand = Plus / Plus Query: 120 caggcacaggcagacctgtggcgccacagcctctactacctctcctccatggcgctccgg 179 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 118 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 177 Query: 180 tgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcgg 226 ||||||||| |||||| ||||| || | ||||||||||| ||||| Sbjct: 178 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcgg 224
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 117 bits (59), Expect = 1e-22 Identities = 95/107 (88%) Strand = Plus / Plus Query: 120 caggcacaggcagacctgtggcgccacagcctctactacctctcctccatggcgctccgg 179 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 118 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 177 Query: 180 tgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcgg 226 ||||||||| |||||| ||||| || | ||||||||||| ||||| Sbjct: 178 tgcgccgtcaagctcggcatccccacagtcatccaccgcctcggcgg 224
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 115 bits (58), Expect = 5e-22 Identities = 109/126 (86%) Strand = Plus / Plus Query: 123 gcacaggcagacctgtggcgccacagcctctactacctctcctccatggcgctccggtgc 182 |||||||| |||||||||||||||| ||| ||||||||| | ||||||| |||||| ||| Sbjct: 87 gcacaggccgacctgtggcgccacaccctttactacctcacgtccatggggctccgctgc 146 Query: 183 gccgtcgagctcgagatcccgactgcgatccaccgcctaggcggggtcgcctcgctgccc 242 |||||| |||||| |||||||| ||||||||| ||| || || ||| ||||||||||| Sbjct: 147 gccgtcaagctcggcatcccgacggcgatccacaacctcggtggcgtctcctcgctgccc 206 Query: 243 gacctg 248 |||||| Sbjct: 207 gacctg 212 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 625 gcccacgacaaccttgggatcg 646 |||||||||||||||||||||| Sbjct: 585 gcccacgacaaccttgggatcg 606
>ref|NM_001074098.1| Oryza sativa (japonica cultivar-group) Os11g0235500 (Os11g0235500) mRNA, complete cds Length = 1137 Score = 113 bits (57), Expect = 2e-21 Identities = 114/133 (85%) Strand = Plus / Plus Query: 94 aggttcccgcggacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctct 153 |||||||| | ||||||||||||||||| |||||||| ||||| |||||||||||| ||| Sbjct: 26 aggttcccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttct 85 Query: 154 actacctctcctccatggcgctccggtgcgccgtcgagctcgagatcccgactgcgatcc 213 ||||||| | ||||||||||||| ||||||| | |||||| ||||| || || |||| Sbjct: 86 cctacctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatcc 145 Query: 214 accgcctaggcgg 226 ||||||| ||||| Sbjct: 146 accgcctcggcgg 158 Score = 67.9 bits (34), Expect = 1e-07 Identities = 192/244 (78%), Gaps = 3/244 (1%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 |||||||||||| ||||||||| || |||| ||||||||| ||| | ||| | ||| Sbjct: 649 ctgaccgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccg 708 Query: 754 cacatcaagtgcactgtgttggaccttccaaaggtggtcgaaaaagcccc---agctgat 810 |||||||||||||| ||| ||||||| || |||||| |||| || || || | |||| Sbjct: 709 cacatcaagtgcacggtgctggacctcccgaaggtgatcgacaaggcgccggtggatgat 768 Query: 811 ggagtcattaactatgtcgcgggtgacctgttccacaccgtcccaccatctcgagtggtg 870 || || |||||||||| || |||||| |||| || | |||||||| ||| || ||| Sbjct: 769 ggcgtggttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaagccgtg 828 Query: 871 atgctcaagcttgtgctacacttttggagtgatgaggattgcgtgaaaatcctagcccag 930 | ||||||||||| || || |||||||| ||||| || |||||||| ||||| ||||| Sbjct: 829 cttctcaagcttgtactgcatttttggagcgatgacgactgcgtgaagatcctgtcccag 888 Query: 931 tgca 934 |||| Sbjct: 889 tgca 892
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 113 bits (57), Expect = 2e-21 Identities = 114/133 (85%) Strand = Plus / Plus Query: 94 aggttcccgcggacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctct 153 |||||||| | ||||||||||||||||| |||||||| ||||| |||||||||||| ||| Sbjct: 43537 aggttcccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttct 43596 Query: 154 actacctctcctccatggcgctccggtgcgccgtcgagctcgagatcccgactgcgatcc 213 ||||||| | ||||||||||||| ||||||| | |||||| ||||| || || |||| Sbjct: 43597 cctacctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatcc 43656 Query: 214 accgcctaggcgg 226 ||||||| ||||| Sbjct: 43657 accgcctcggcgg 43669 Score = 58.0 bits (29), Expect = 9e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 |||||||||||| ||||||||| || |||| ||||||||| ||| | ||| | ||| Sbjct: 44160 ctgaccgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccg 44219 Query: 754 cacatcaagtgcactgtgttggaccttccaaaggtggtcga 794 |||||||||||||| ||| ||||||| || |||||| |||| Sbjct: 44220 cacatcaagtgcacggtgctggacctcccgaaggtgatcga 44260
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 113 bits (57), Expect = 2e-21 Identities = 114/133 (85%) Strand = Plus / Minus Query: 94 aggttcccgcggacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctct 153 |||||||| | ||||||||||||||||| |||||||| ||||| |||||||||||| ||| Sbjct: 52238 aggttcccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttct 52179 Query: 154 actacctctcctccatggcgctccggtgcgccgtcgagctcgagatcccgactgcgatcc 213 ||||||| | ||||||||||||| ||||||| | |||||| ||||| || || |||| Sbjct: 52178 cctacctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatcc 52119 Query: 214 accgcctaggcgg 226 ||||||| ||||| Sbjct: 52118 accgcctcggcgg 52106 Score = 58.0 bits (29), Expect = 9e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 |||||||||||| ||||||||| || |||| ||||||||| ||| | ||| | ||| Sbjct: 51615 ctgaccgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccg 51556 Query: 754 cacatcaagtgcactgtgttggaccttccaaaggtggtcga 794 |||||||||||||| ||| ||||||| || |||||| |||| Sbjct: 51555 cacatcaagtgcacggtgctggacctcccgaaggtgatcga 51515
>ref|NM_001074271.1| Oryza sativa (japonica cultivar-group) Os11g0303300 (Os11g0303300) mRNA, complete cds Length = 936 Score = 103 bits (52), Expect = 2e-18 Identities = 118/140 (84%) Strand = Plus / Plus Query: 126 caggcagacctgtggcgccacagcctctactacctctcctccatggcgctccggtgcgcc 185 ||||| || ||||||||||||| ||||| ||||||| |||||||| | |||||||||||| Sbjct: 190 caggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgcc 249 Query: 186 gtcgagctcgagatcccgactgcgatccaccgcctaggcggggtcgcctcgctgcccgac 245 ||| | |||| ||||| || || |||||||||| ||||| | |||||||||||||||| Sbjct: 250 gtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgac 309 Query: 246 ctgatggccgcgctgtccct 265 || | ||||||||||||| Sbjct: 310 ctcgtcaccgcgctgtccct 329 Score = 48.1 bits (24), Expect = 0.091 Identities = 60/72 (83%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 |||||||||||| |||||||||| || ||| | ||||||||| ||| | |||| | ||| Sbjct: 760 ctgaccgactgcggcggcggcgacggcacggcggcgagggccatcgccgaggccttcccg 819 Query: 754 cacatcaagtgc 765 ||| |||||||| Sbjct: 820 cacgtcaagtgc 831
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 103 bits (52), Expect = 2e-18 Identities = 118/140 (84%) Strand = Plus / Minus Query: 126 caggcagacctgtggcgccacagcctctactacctctcctccatggcgctccggtgcgcc 185 ||||| || ||||||||||||| ||||| ||||||| |||||||| | |||||||||||| Sbjct: 89390 caggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgcc 89331 Query: 186 gtcgagctcgagatcccgactgcgatccaccgcctaggcggggtcgcctcgctgcccgac 245 ||| | |||| ||||| || || |||||||||| ||||| | |||||||||||||||| Sbjct: 89330 gtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgac 89271 Query: 246 ctgatggccgcgctgtccct 265 || | ||||||||||||| Sbjct: 89270 ctcgtcaccgcgctgtccct 89251 Score = 101 bits (51), Expect = 7e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 170 ||||||||||| || ||||| ||||||||||||||||||||||||| | || | |||||| Sbjct: 118013 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 117954 Query: 171 gcgctccggtgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcggggtc 230 ||| ||| |||||||||| |||||| ||||| || || ||||||||| || || | Sbjct: 117953 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 117894 Query: 231 gcctcgctgcccgacctgatggccgcgctgtccct 265 ||||||||||||||||| | ||||| |||||||| Sbjct: 117893 gcctcgctgcccgaccttgtcgccgccctgtccct 117859 Score = 81.8 bits (41), Expect = 7e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 170 ||||||||||| || ||||| ||| ||| ||||||||||||||||| | || | |||||| Sbjct: 141661 gagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccatg 141602 Query: 171 gcgctccggtgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcggggtc 230 ||| | | |||||||||| |||||| ||||| || || ||||||||| ||||| | Sbjct: 141601 gcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcacc 141542 Query: 231 gcctcgctgcccgacct 247 ||||||||||||||||| Sbjct: 141541 gcctcgctgcccgacct 141525 Score = 48.1 bits (24), Expect = 0.091 Identities = 48/56 (85%) Strand = Plus / Minus Query: 1123 gactacaaaattgtgaagaaattgggagcccgatcagtcatcgaggtctacccgta 1178 |||||||| |||||||||||||||||| | || | ||||| |||||||| ||||| Sbjct: 80941 gactacaagattgtgaagaaattgggacctcggtgtgtcattgaggtctatccgta 80886 Score = 48.1 bits (24), Expect = 0.091 Identities = 60/72 (83%) Strand = Plus / Minus Query: 694 ctgaccgactgctgcggcggcgatggtacgacagcgagggccctcgtcaaggcttatccg 753 |||||||||||| |||||||||| || ||| | ||||||||| ||| | |||| | ||| Sbjct: 88820 ctgaccgactgcggcggcggcgacggcacggcggcgagggccatcgccgaggccttcccg 88761 Query: 754 cacatcaagtgc 765 ||| |||||||| Sbjct: 88760 cacgtcaagtgc 88749 Score = 46.1 bits (23), Expect = 0.36 Identities = 50/59 (84%) Strand = Plus / Minus Query: 1117 ttcactgactacaaaattgtgaagaaattgggagcccgatcagtcatcgaggtctaccc 1175 |||| ||||||||| |||||||||||| ||||||| ||| ||| | ||||||||||| Sbjct: 140305 ttcagtgactacaatattgtgaagaaactgggagctcgaggcgtctttgaggtctaccc 140247 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 694 ctgaccgactgctgcggcggcgatgg 719 |||||||||||| ||||||||||||| Sbjct: 117416 ctgaccgactgccgcggcggcgatgg 117391
>ref|NM_001074274.1| Oryza sativa (japonica cultivar-group) Os11g0303600 (Os11g0303600) mRNA, complete cds Length = 1253 Score = 101 bits (51), Expect = 7e-18 Identities = 129/155 (83%) Strand = Plus / Plus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 170 ||||||||||| || ||||| ||||||||||||||||||||||||| | || | |||||| Sbjct: 92 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 151 Query: 171 gcgctccggtgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcggggtc 230 ||| ||| |||||||||| |||||| ||||| || || ||||||||| || || | Sbjct: 152 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 211 Query: 231 gcctcgctgcccgacctgatggccgcgctgtccct 265 ||||||||||||||||| | ||||| |||||||| Sbjct: 212 gcctcgctgcccgaccttgtcgccgccctgtccct 246 Score = 65.9 bits (33), Expect = 4e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 820 aactatgtcgcgggtgacctgttccacaccgtcccaccatctcgagtggtgatgctcaag 879 |||||||| ||||||||| |||||| | || ||||||| ||| || || ||||||||| Sbjct: 815 aactatgtagcgggtgacatgttccgcgccatcccacctgctcaagctgtcatgctcaag 874 Query: 880 cttgtgctacacttttggagtgatgaggattgcgtgaaaat 920 |||||||| ||| |||||||| |||||||| |||||||| Sbjct: 875 cttgtgcttcaccactggagtgacgaggattgtgtgaaaat 915 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatgg 719 |||||||||||| ||||||||||||| Sbjct: 689 ctgaccgactgccgcggcggcgatgg 714
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 101 bits (51), Expect = 7e-18 Identities = 129/155 (83%) Strand = Plus / Plus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 170 ||||||||||| || ||||| ||||||||||||||||||||||||| | || | |||||| Sbjct: 92 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 151 Query: 171 gcgctccggtgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcggggtc 230 ||| ||| |||||||||| |||||| ||||| || || ||||||||| || || | Sbjct: 152 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 211 Query: 231 gcctcgctgcccgacctgatggccgcgctgtccct 265 ||||||||||||||||| | ||||| |||||||| Sbjct: 212 gcctcgctgcccgaccttgtcgccgccctgtccct 246 Score = 65.9 bits (33), Expect = 4e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 820 aactatgtcgcgggtgacctgttccacaccgtcccaccatctcgagtggtgatgctcaag 879 |||||||| ||||||||| |||||| | || ||||||| ||| || || ||||||||| Sbjct: 815 aactatgtagcgggtgacatgttccgcgccatcccacctgctcaagctgtcatgctcaag 874 Query: 880 cttgtgctacacttttggagtgatgaggattgcgtgaaaat 920 |||||||| ||| |||||||| |||||||| |||||||| Sbjct: 875 cttgtgcttcaccactggagtgacgaggattgtgtgaaaat 915 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 694 ctgaccgactgctgcggcggcgatgg 719 |||||||||||| ||||||||||||| Sbjct: 689 ctgaccgactgccgcggcggcgatgg 714
>ref|NM_001074277.1| Oryza sativa (japonica cultivar-group) Os11g0304000 (Os11g0304000) mRNA, complete cds Length = 1812 Score = 81.8 bits (41), Expect = 7e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 170 ||||||||||| || ||||| ||| ||| ||||||||||||||||| | || | |||||| Sbjct: 25 gagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccatg 84 Query: 171 gcgctccggtgcgccgtcgagctcgagatcccgactgcgatccaccgcctaggcggggtc 230 ||| | | |||||||||| |||||| ||||| || || ||||||||| ||||| | Sbjct: 85 gcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcacc 144 Query: 231 gcctcgctgcccgacct 247 ||||||||||||||||| Sbjct: 145 gcctcgctgcccgacct 161 Score = 46.1 bits (23), Expect = 0.36 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1117 ttcactgactacaaaattgtgaagaaattgggagc 1151 |||| ||||||||| |||||||||||| ||||||| Sbjct: 1048 ttcagtgactacaatattgtgaagaaactgggagc 1082
>emb|CT836570.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA105I03, full insert sequence Length = 1305 Score = 77.8 bits (39), Expect = 1e-10 Identities = 87/103 (84%) Strand = Plus / Plus Query: 680 aggggcttgactccctgaccgactgctgcggcggcgatggtacgacagcgagggccctcg 739 ||||||| || || ||||| |||||| ||||||||||||| |||| |||||| || ||| Sbjct: 649 aggggctggagtcgctgacagactgcggcggcggcgatggcgcgacggcgaggaccatcg 708 Query: 740 tcaaggcttatccgcacatcaagtgcactgtgttggaccttcc 782 || |||| | || |||||||||||||||||| |||||||||| Sbjct: 709 tcgaggccttcccacacatcaagtgcactgtgctggaccttcc 751 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactac 158 ||||||||||| |||||||| || || ||||||||||||||||||||| Sbjct: 81 gagctgctgcaagcacaggccgatctatggcgccacagcctctactac 128 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 868 gtgatgctcaagcttgtgctacacttttggagtgatgaggattgcgtgaaaatcctagc 926 |||||||| ||| |||| || ||| ||||||||| |||||||||||||||||||||| Sbjct: 837 gtgatgctaaaggttgtacttcaccattggagtgaccaggattgcgtgaaaatcctagc 895
>ref|NM_001074278.1| Oryza sativa (japonica cultivar-group) Os11g0305400 (Os11g0305400) mRNA, complete cds Length = 3417 Score = 61.9 bits (31), Expect = 6e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 680 aggggcttgactccctgaccgactgctgcggcggcgatggtacgacagcgagggccctcg 739 ||||||| || || ||||| |||||| |||||||||| || |||| |||||| || ||| Sbjct: 611 aggggctggagtcgctgacagactgcggcggcggcgacggcgcgacggcgaggaccatcg 670 Query: 740 tcaaggcttatccgcacatcaagtgcactgtgttggaccttcc 782 || |||| | || ||| |||||||||||||| |||||||||| Sbjct: 671 tcgaggccttcccacacgtcaagtgcactgtgctggaccttcc 713 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 111 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactac 158 ||||||||||| |||||||| || || |||||||||||||||| |||| Sbjct: 43 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctac 90 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 868 gtgatgctcaagcttgtgctacacttttggagtgatgaggattgcgtgaaaatcctagc 926 |||||||| ||| |||| || ||| ||||||||| |||||||||||||||||||||| Sbjct: 799 gtgatgctaaaggttgtacttcaccattggagtgaccaggattgcgtgaaaatcctagc 857
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence Length = 366120 Score = 48.1 bits (24), Expect = 0.091 Identities = 24/24 (100%) Strand = Plus / Minus Query: 101 cgcggacgctgagctgctgcaggc 124 |||||||||||||||||||||||| Sbjct: 220248 cgcggacgctgagctgctgcaggc 220225
>ref|NM_001074269.1| Oryza sativa (japonica cultivar-group) Os11g0303100 (Os11g0303100) mRNA, complete cds Length = 444 Score = 46.1 bits (23), Expect = 0.36 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1123 gactacaaaattgtgaagaaattggga 1149 |||||||| |||||||||||||||||| Sbjct: 361 gactacaagattgtgaagaaattggga 387
>gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosome 17, complete sequence Length = 178741 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 cactcaggcagagaccattgagg 96 ||||||||||||||||||||||| Sbjct: 16317 cactcaggcagagaccattgagg 16295
>emb|AL935160.11| Zebrafish DNA sequence from clone CH211-184C7 in linkage group 12, complete sequence Length = 140401 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 aagaaagggagagagagcaatgg 72 ||||||||||||||||||||||| Sbjct: 58855 aagaaagggagagagagcaatgg 58877
>ref|XM_730668.1| Plasmodium chabaudi chabaudi hypothetical protein (PC107709.00.0) partial mRNA Length = 776 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1430 attaataatatcattgtttattt 1452 ||||||||||||||||||||||| Sbjct: 105 attaataatatcattgtttattt 83
>dbj|AK242295.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075191M10, full insert sequence Length = 1822 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 103 cggacgctgagctgctgcaggc 124 |||||||||||||||||||||| Sbjct: 499 cggacgctgagctgctgcaggc 478
>ref|NM_001062664.1| Oryza sativa (japonica cultivar-group) Os05g0530800 (Os05g0530800) mRNA, complete cds Length = 687 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 cggacgctgagctgctgcaggc 124 |||||||||||||||||||||| Sbjct: 115 cggacgctgagctgctgcaggc 136
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 cggacgctgagctgctgcaggc 124 |||||||||||||||||||||| Sbjct: 2310 cggacgctgagctgctgcaggc 2331
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 cggacgctgagctgctgcaggc 124 |||||||||||||||||||||| Sbjct: 68602 cggacgctgagctgctgcaggc 68623
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 cggacgctgagctgctgcaggc 124 |||||||||||||||||||||| Sbjct: 26151262 cggacgctgagctgctgcaggc 26151283
>ref|XM_645401.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box helicase, putative (216.t00008) partial mRNA Length = 2169 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1414 atttattaatttctgtattaat 1435 |||||||||||||||||||||| Sbjct: 706 atttattaatttctgtattaat 685
>emb|CT829692.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN090L24, full insert sequence Length = 980 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 aaccaagaaagggagagagag 66 ||||||||||||||||||||| Sbjct: 227 aaccaagaaagggagagagag 207
>ref|NM_001074612.1| Oryza sativa (japonica cultivar-group) Os11g0551800 (Os11g0551800) mRNA, complete cds Length = 975 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 aaccaagaaagggagagagag 66 ||||||||||||||||||||| Sbjct: 210 aaccaagaaagggagagagag 190
>ref|NM_001074611.1| Oryza sativa (japonica cultivar-group) Os11g0551700 (Os11g0551700) mRNA, complete cds Length = 3414 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 aaccaagaaagggagagagag 66 ||||||||||||||||||||| Sbjct: 3209 aaccaagaaagggagagagag 3229
>gb|CP000393.1| Trichodesmium erythraeum IMS101, complete genome Length = 7750108 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1419 ttaatttctgtattaataatatcat 1443 ||||||||||||||| ||||||||| Sbjct: 189425 ttaatttctgtattattaatatcat 189449
>gb|AC155235.2| Mus musculus BAC clone RP24-406H23 from chromosome 12, complete sequence Length = 158341 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 attaaaccaagaaagggagag 62 ||||||||||||||||||||| Sbjct: 97429 attaaaccaagaaagggagag 97409
>gb|AC150698.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072P10, complete sequence Length = 147540 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 aaccaagaaagggagagagag 66 ||||||||||||||||||||| Sbjct: 44983 aaccaagaaagggagagagag 45003
>gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041I05, complete sequence Length = 148785 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 aaccaagaaagggagagagag 66 ||||||||||||||||||||| Sbjct: 94899 aaccaagaaagggagagagag 94919
>gb|AE006884.1| Sulfolobus solfataricus P2 section 243 of 272 of the complete genome Length = 13484 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1429 tattaataatatcattgtttatttc 1453 |||||||||| |||||||||||||| Sbjct: 10519 tattaataatctcattgtttatttc 10543
>gb|AC025277.10| Homo sapiens chromosome 16 clone CTD-3229J4, complete sequence Length = 189032 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1204 taaaggaggtgcttatttttc 1224 ||||||||||||||||||||| Sbjct: 69416 taaaggaggtgcttatttttc 69396
>gb|AC068473.19| Homo sapiens chromosome 18, clone RP11-567M16, complete sequence Length = 175721 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1320 tttatattggcatatgtatgtgttt 1344 |||||||| |||||||||||||||| Sbjct: 14346 tttatatttgcatatgtatgtgttt 14370
>gb|AC068910.45| Mus musculus strain C57BL/6J chromosome 9 clone rp23-9g9, complete sequence Length = 169984 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1307 agtattaaagcactttatatt 1327 ||||||||||||||||||||| Sbjct: 166944 agtattaaagcactttatatt 166964
>gb|AC096785.29| Mus musculus strain C57BL/6J clone rp23-382i2 map 18, complete sequence Length = 201304 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1307 agtattaaagcactttatatt 1327 ||||||||||||||||||||| Sbjct: 64399 agtattaaagcactttatatt 64419
>gb|AC159242.2| Mus musculus BAC clone RP24-325A23 from chromosome 13, complete sequence Length = 193570 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 aaagggagagagagcaatggc 73 ||||||||||||||||||||| Sbjct: 72458 aaagggagagagagcaatggc 72478
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 caacacattcaatcacataattaaa 47 ||||||||| ||||||||||||||| Sbjct: 27427663 caacacattaaatcacataattaaa 27427639
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1346 tcatgttagtgtgctccaatg 1366 ||||||||||||||||||||| Sbjct: 11037299 tcatgttagtgtgctccaatg 11037319
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 gcgccgtcgagctcgagatcc 201 ||||||||||||||||||||| Sbjct: 34354249 gcgccgtcgagctcgagatcc 34354229
>emb|AL390920.22| Human DNA sequence from clone RP11-384P18 on chromosome 10, complete sequence Length = 170365 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 ataattaaaccaagaaagggagaga 63 |||||||||||||||||| |||||| Sbjct: 120777 ataattaaaccaagaaagagagaga 120753
>emb|AL161454.10| Human DNA sequence from clone RP11-72B4 on chromosome 9 Contains the gene for a novel protein similar to putative repair and recombination helicase RAD26L (LOC56959), a parkinson disease 7 (PARK7) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 144536 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1416 ttattaatttctgtattaataatat 1440 |||||||| |||||||||||||||| Sbjct: 44609 ttattaatatctgtattaataatat 44633
>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049O12, from chromosome 2, complete sequence Length = 155154 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 gcgccgtcgagctcgagatcc 201 ||||||||||||||||||||| Sbjct: 150857 gcgccgtcgagctcgagatcc 150877
>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08, complete sequence Length = 142814 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1346 tcatgttagtgtgctccaatg 1366 ||||||||||||||||||||| Sbjct: 45954 tcatgttagtgtgctccaatg 45974
>emb|AJ440001.1|OSA440001 Oryza sativa (japonica cultivar-group) a3 gene for plasma membrane H+ ATPase, exons 1-21 Length = 6072 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 caacacattcaatcacataattaaa 47 ||||||||| ||||||||||||||| Sbjct: 4253 caacacattaaatcacataattaaa 4229
>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1548_F12 Length = 118814 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 gcgccgtcgagctcgagatcc 201 ||||||||||||||||||||| Sbjct: 51896 gcgccgtcgagctcgagatcc 51876
>gb|AF546189.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family from Zea mays, complete sequence Length = 116115 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1087 cactggtgtgagctatttaag 1107 ||||||||||||||||||||| Sbjct: 109785 cactggtgtgagctatttaag 109765
>dbj|AK105688.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C01, full insert sequence Length = 2002 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1346 tcatgttagtgtgctccaatg 1366 ||||||||||||||||||||| Sbjct: 1598 tcatgttagtgtgctccaatg 1578
>dbj|AK066863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088A06, full insert sequence Length = 805 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 aaccaagaaagggagagagag 66 ||||||||||||||||||||| Sbjct: 211 aaccaagaaagggagagagag 191
>dbj|AK065632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028E03, full insert sequence Length = 2023 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1346 tcatgttagtgtgctccaatg 1366 ||||||||||||||||||||| Sbjct: 1603 tcatgttagtgtgctccaatg 1583
>dbj|AK061812.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-B02, full insert sequence Length = 975 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 aaccaagaaagggagagagag 66 ||||||||||||||||||||| Sbjct: 210 aaccaagaaagggagagagag 190
>emb|AL928743.1|CNS08CBG Oryza sativa chromosome 12, . BAC OSJNBb0011N16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 55237 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 23 caacacattcaatcacataattaaa 47 ||||||||| ||||||||||||||| Sbjct: 54155 caacacattaaatcacataattaaa 54179
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 cgcggacgctgagctgctgca 121 ||||||||||||||||||||| Sbjct: 172421 cgcggacgctgagctgctgca 172401
>emb|CT030124.12| Mouse DNA sequence from clone RP23-100B15 on chromosome 9, complete sequence Length = 203615 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1307 agtattaaagcactttatatt 1327 ||||||||||||||||||||| Sbjct: 38282 agtattaaagcactttatatt 38302
>gb|AC074314.29| 433m13, complete sequence Length = 209644 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1307 agtattaaagcactttatatt 1327 ||||||||||||||||||||| Sbjct: 155115 agtattaaagcactttatatt 155135
>gb|AC128697.4| Mus musculus BAC clone RP24-388P9 from 12, complete sequence Length = 169780 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 attaaaccaagaaagggagag 62 ||||||||||||||||||||| Sbjct: 7387 attaaaccaagaaagggagag 7367
>gb|AC149052.3| Mus musculus BAC clone RP24-548O1 from 7, complete sequence Length = 209182 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 gctgagctgctgcaggcacag 128 ||||||||||||||||||||| Sbjct: 30475 gctgagctgctgcaggcacag 30455
>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109222 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 caacacattcaatcacataattaaa 47 ||||||||| ||||||||||||||| Sbjct: 3577 caacacattaaatcacataattaaa 3553
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 caacacattcaatcacataattaaa 47 ||||||||| ||||||||||||||| Sbjct: 95983 caacacattaaatcacataattaaa 95959
>gb|AC149282.2| Mus musculus BAC clone RP23-236D19 from 7, complete sequence Length = 221553 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 gctgagctgctgcaggcacag 128 ||||||||||||||||||||| Sbjct: 21042 gctgagctgctgcaggcacag 21062
>dbj|AB057733.1| Ciona savignyi Cs-LHX3 mRNA, complete cds Length = 1988 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 cgctccggtgcgccgtcgagc 192 ||||||||||||||||||||| Sbjct: 885 cgctccggtgcgccgtcgagc 905 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 252,033,288 Number of extensions: 13558645 Number of successful extensions: 279561 Number of sequences better than 10.0: 74 Number of HSP's gapped: 279534 Number of HSP's successfully gapped: 139 Length of query: 1472 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1449 Effective length of database: 18,503,978,556 Effective search space: 26812264927644 Effective search space used: 26812264927644 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
