No.
Definition
Score (bits)
E Value
1 gb|AF320325.1|AF320325 Hordeum vulgare arabinoxylan arabinofuran...
4799
0.0
2 emb|CT832127.1| Oryza sativa (indica cultivar-group) cDNA clone:...
1606
0.0
3 ref|NM_001072594.1| Oryza sativa (japonica cultivar-group) Os12g...
1606
0.0
4 dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA clon...
1574
0.0
5 ref|NM_001072192.1| Oryza sativa (japonica cultivar-group) Os11g...
1566
0.0
6 dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA clon...
1566
0.0
7 gb|AY106254.1| Zea mays PCO073074 mRNA sequence
1495
0.0
8 gb|AF320324.1|AF320324 Hordeum vulgare arabinoxylan arabinofuran...
1055
0.0
9 emb|CT834675.1| Oryza sativa (indica cultivar-group) cDNA clone:...
837
0.0
10 gb|AY105192.1| Zea mays PCO073073 mRNA sequence
708
0.0
11 ref|NM_001072196.1| Oryza sativa (japonica cultivar-group) Os11g...
448
e-122
12 dbj|AK102526.1| Oryza sativa (japonica cultivar-group) cDNA clon...
448
e-122
13 ref|NM_001058885.1| Oryza sativa (japonica cultivar-group) Os04g...
434
e-118
14 dbj|AK061612.1| Oryza sativa (japonica cultivar-group) cDNA clon...
347
1e-91
15 dbj|AK062199.1| Oryza sativa (japonica cultivar-group) cDNA clon...
337
1e-88
16 gb|AY111908.1| Zea mays CL62603_1 mRNA sequence
323
2e-84
17 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
222
5e-54
18 emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003...
222
5e-54
19 ref|NM_001072595.1| Oryza sativa (japonica cultivar-group) Os12g...
220
2e-53
20 dbj|AK103721.1| Oryza sativa (japonica cultivar-group) cDNA clon...
220
2e-53
21 dbj|AK119404.1| Oryza sativa (japonica cultivar-group) cDNA clon...
216
3e-52
22 ref|NM_001072193.1| Oryza sativa (japonica cultivar-group) Os11g...
206
3e-49
23 dbj|AK099668.1| Oryza sativa (japonica cultivar-group) cDNA clon...
206
3e-49
24 gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome...
204
1e-48
25 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
204
1e-48
26 gb|BT017207.1| Zea mays clone EL01N0371H11.c mRNA sequence
159
6e-35
27 emb|CR855231.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
153
4e-33
28 gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome...
153
4e-33
29 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
153
4e-33
30 emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4,...
153
4e-33
31 gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete seq...
135
9e-28
32 gb|AF429985.1|AF429985 Lycopersicon esculentum arabinosidase ARA...
135
9e-28
33 dbj|AB073310.1| Solanum lycopersicum LeARF1 mRNA for alpha-L-ara...
135
9e-28
34 dbj|AB073311.1| Pyrus pyrifolia PPARF1 mRNA for alpha-L-arabinof...
123
3e-24
35 gb|AY309436.1| Malus x domestica alpha-L-arabinofuranosidase (AF...
115
8e-22
36 dbj|AK242628.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
113
3e-21
37 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
113
3e-21
38 dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic D...
113
3e-21
39 gb|AC189431.1| Brassica rapa subsp. pekinensis clone KBrB068B07,...
96
7e-16
40 gb|AY487314.1| Ficus carica a-arabinofuranosidase 1 mRNA, partia...
96
7e-16
41 dbj|AP004538.1| Lotus japonicus genomic DNA, chromosome 1, clone...
94
3e-15
42 ref|NM_001053340.1| Oryza sativa (japonica cultivar-group) Os02g...
92
1e-14
43 ref|NM_111911.3| Arabidopsis thaliana ASD1; hydrolase, acting on...
84
3e-12
44 gb|AY243509.1| Arabidopsis thaliana alpha-L-arabinofuranosidase ...
84
3e-12
45 gb|AY143944.1| Arabidopsis thaliana At3g10740/T7M13_18 mRNA, com...
84
3e-12
46 gb|AF372949.1|AF372949 Arabidopsis thaliana AT3g10740/T7M13_18 m...
84
3e-12
47 emb|BX824011.1|CNS0A4VB Arabidopsis thaliana Full-length cDNA Co...
84
3e-12
48 gb|DQ486870.3| Prunus persica alpha-L-arabinofuranosidase mRNA, ...
80
4e-11
49 ref|NM_001067223.1| Oryza sativa (japonica cultivar-group) Os07g...
78
2e-10
50 ref|NM_122513.3| Arabidopsis thaliana hydrolase, acting on glyco...
78
2e-10
51 gb|AY243510.1| Arabidopsis thaliana alpha-L-arabinofuranosidase ...
78
2e-10
52 gb|AY063925.1| Arabidopsis thaliana putative arabinosidase (At5g...
78
2e-10
53 gb|BT006062.1| Arabidopsis thaliana clone U18147 unknown protein...
78
2e-10
54 emb|BX833642.1|CNS0A0L4 Arabidopsis thaliana Full-length cDNA Co...
78
2e-10
55 dbj|AK064838.1| Oryza sativa (japonica cultivar-group) cDNA clon...
78
2e-10
56 dbj|D29742.1| Daucus carota mRNA for arabinofuranosidase, comple...
74
3e-09
57 gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete se...
68
2e-07
58 ref|NM_001072597.1| Oryza sativa (japonica cultivar-group) Os12g...
66
7e-07
59 gb|AC141107.5| Medicago truncatula clone mth2-34a12, complete se...
66
7e-07
60 dbj|AK062739.1| Oryza sativa (japonica cultivar-group) cDNA clon...
66
7e-07
61 gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome III BAC...
64
3e-06
62 gb|BT013510.1| Lycopersicon esculentum clone 132201F, mRNA sequence
62
1e-05
63 dbj|AK220766.1| Arabidopsis thaliana mRNA for putative alpha-L-a...
60
4e-05
64 dbj|AK222175.1| Arabidopsis thaliana mRNA for putative alpha-L-a...
60
4e-05
65 dbj|AP004537.1| Lotus japonicus genomic DNA, chromosome 1, clone...
58
2e-04
66 gb|AF149413.1|T1N24 Arabidopsis thaliana BAC T1N24
54
0.003
67 gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str...
52
0.010
68 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
52
0.010
69 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
48
0.15
70 dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic D...
48
0.15
71 dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic D...
48
0.15
72 gb|DQ822467.1| Prunus salicina alpha-L-arabinofuranosidase mRNA,...
46
0.61
73 gb|AC005586.2| Homo sapiens PAC clone RP4-584D14 from 7, complet...
44
2.4
74 gb|AC157684.2| Xenopus tropicalis clone ISB1-162F14, complete se...
44
2.4
75 ref|XM_823559.1| Trypanosoma brucei TREU927 hypothetical protein...
44
2.4
76 gb|AC112912.4| Homo sapiens 3 BAC RP11-634L24 (Roswell Park Canc...
44
2.4
77 gb|AC097655.2| Homo sapiens BAC clone RP11-284H12 from 4, comple...
44
2.4
78 ref|XM_692343.1| PREDICTED: Danio rerio similar to usherin isofo...
44
2.4
79 gb|AC146055.4| Pan troglodytes BAC clone RP43-80G9 from chromoso...
44
2.4
80 emb|AL928842.13| Zebrafish DNA sequence from clone CH211-279E11 ...
44
2.4
81 emb|AM180355.1| Clostridium difficile 630 complete genome
42
9.5
82 gb|AC184156.3| Pan troglodytes BAC clone CH251-321B16 from chrom...
42
9.5
83 ref|XR_009642.1| PREDICTED: Rattus norvegicus hypothetical prote...
42
9.5
84 ref|XR_009643.1| PREDICTED: Rattus norvegicus hypothetical prote...
42
9.5
85 ref|XR_005443.1| PREDICTED: Rattus norvegicus hypothetical prote...
42
9.5
86 ref|XM_981428.1| PREDICTED: Mus musculus hypothetical LOC634639 ...
42
9.5
87 ref|XM_988097.1| PREDICTED: Mus musculus hypothetical LOC634639 ...
42
9.5
88 gb|AY772010.3| Mus musculus ARF-binding protein 1 mRNA, complete...
42
9.5
89 gb|AY018212.1| Oryza sativa microsatellite MRG0537 containing (A...
42
9.5
90 gb|AC098294.6| Rattus norvegicus 8 BAC CH230-1L23 (Children's Ho...
42
9.5
91 gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete...
42
9.5
92 gb|AF067610.1| Caenorhabditis elegans cosmid F41A4, complete seq...
42
9.5
93 gb|AC157365.5| Mus musculus chromosome 8, clone RP23-113A2, comp...
42
9.5
94 gb|AC011276.12| Homo sapiens chromosome , clone RP11-13J17, comp...
42
9.5
95 gb|DQ097265.1| Mus musculus Mcl-1 ubiquitin ligase (Mule) mRNA, ...
42
9.5
96 dbj|AK163416.1| Mus musculus 2 cells egg cDNA, RIKEN full-length...
42
9.5
97 gb|AC116913.6| Homo sapiens chromosome 15, clone CTD-3185P2, com...
42
9.5
98 dbj|AK165140.1| Mus musculus 2 days pregnant adult female ovary ...
42
9.5
99 ref|NM_067570.3| Caenorhabditis elegans F41A4.1 (F41A4.1) mRNA, ...
42
9.5
100 dbj|AK049460.1| Mus musculus 7 days embryo whole body cDNA, RIKE...
42
9.5
101 emb|CT009558.5| M.truncatula DNA sequence from clone MTH2-72I11 ...
42
9.5
102 dbj|AK045183.1| Mus musculus 9.5 days embryo parthenogenote cDNA...
42
9.5
103 dbj|AK031374.1| Mus musculus 13 days embryo male testis cDNA, RI...
42
9.5
104 gb|AC079175.24| Homo sapiens Xp BAC RP11-122N14 (Roswell Park Ca...
42
9.5
105 ref|XM_921308.1| PREDICTED: Mus musculus hypothetical LOC634639 ...
42
9.5
106 gb|AC139357.27| Mus musculus chromosome 8, clone RP24-335I20, co...
42
9.5
107 gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, comp...
42
9.5
108 ref|NM_021523.3| Mus musculus HECT, UBA and WWE domain containin...
42
9.5
109 emb|AL954855.8| Mouse DNA sequence from clone RP23-211L10 on chr...
42
9.5
110 gb|AC141632.4| Mus musculus BAC clone RP24-100G24 from 3, comple...
42
9.5
111 emb|AL928852.7| Zebrafish DNA sequence from clone CH211-287A12, ...
42
9.5
>dbj|AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
Length = 27566993
Score = 222 bits (112), Expect = 5e-54
Identities = 133/140 (95%)
Strand = Plus / Plus
Query: 1068 ggttgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggt 1127
||||||||||| || || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1361677 ggttgcttcgtggagggtgaatggttaagaaacgcattcaggtggagggaatctattggt 1361736
Query: 1128 ccatgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggc 1187
|||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 1361737 ccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgatggc 1361796
Query: 1188 cttggatattatgagtttct 1207
||||||||||||||||||||
Sbjct: 1361797 cttggatattatgagtttct 1361816
Score = 196 bits (99), Expect = 3e-46
Identities = 174/199 (87%)
Strand = Plus / Plus
Query: 527 aggttttgaagctggaggactccatacgccatcaaatattgacccatggtctataattgg 586
|||||||||||||||||| | ||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 1360550 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1360609
Query: 587 cgacgactcttccatatttgtggcgactgatcgtacatcatgtttcagtcgaaacattat 646
|| ||||||||||||||||||||||||||||| || |||||||||||||| || | | |
Sbjct: 1360610 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 1360669
Query: 647 cgctcttaggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaa 706
||||| |||||||||||||||||||| | |||||||| |||||||||||||||| ||
Sbjct: 1360670 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 1360729
Query: 707 ccctgggttctggggcatg 725
||| || ||||||||||||
Sbjct: 1360730 cccaggattctggggcatg 1360748
Score = 192 bits (97), Expect = 4e-45
Identities = 169/193 (87%)
Strand = Plus / Plus
Query: 1808 gtggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactg 1867
|||||| ||||| || || || || |||||||||||||||||||||||||||||||||||
Sbjct: 1364560 gtggaacccagacgccattgtatttaactcctggcaacaatacggaactcctagttactg 1364619
Query: 1868 gatgcagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttc 1927
|||||||| ||||||| |||||||| ||||| ||| |||||||||||||||||| |||
Sbjct: 1364620 gatgcagactcttttccgtgaatctagcggtgctatgtttcatccaattacaatcacttc 1364679
Query: 1928 cagctactctggttctctagcagcatctgctatcacctggcaggattccgggaataactt 1987
|||||||||||||||||| ||||||||||| || || ||||||||||| | |||| |||
Sbjct: 1364680 cagctactctggttctctggcagcatctgcaattacttggcaggattctgaaaatagctt 1364739
Query: 1988 cctgagagtaaag 2000
| | |||||||||
Sbjct: 1364740 cttaagagtaaag 1364752
Score = 186 bits (94), Expect = 3e-43
Identities = 127/138 (92%)
Strand = Plus / Plus
Query: 1309 aggatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctg 1368
|||| |||||||| ||||||||||||||||||||||||||| | || |||||||| ||||
Sbjct: 1362673 aggacgtattggacagtctagaatttgcaagggggagtgcagattcgacatggggttctg 1362732
Query: 1369 ttagagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatg 1428
||||||||||||||||||| |||||||| ||||| |||||||| |||||||| |||||||
Sbjct: 1362733 ttagagctgcaatggggcaccctgaaccattccctgtcaaatacgttgcaattggaaatg 1362792
Query: 1429 aagattgtgggaaaaaat 1446
||||||||||||||||||
Sbjct: 1362793 aagattgtgggaaaaaat 1362810
Score = 161 bits (81), Expect = 1e-35
Identities = 120/133 (90%)
Strand = Plus / Plus
Query: 1309 aggatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctg 1368
||||||||||||||||||| |||||||||||||| || ||| | ||||||||||||||||
Sbjct: 1400676 aggatgtattggatagtcttgaatttgcaaggggaagcgcagaatcaacatggggctctg 1400735
Query: 1369 ttagagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatg 1428
||||| |||||||||||||||| |||| ||||||| | || |||||||| || |||||||
Sbjct: 1400736 ttagatctgcaatggggcatcccgaacggttcccactgaagtatgttgctattggaaatg 1400795
Query: 1429 aagattgtgggaa 1441
|||||||||||||
Sbjct: 1400796 aagattgtgggaa 1400808
Score = 153 bits (77), Expect = 4e-33
Identities = 122/137 (89%)
Strand = Plus / Plus
Query: 1068 ggttgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggt 1127
|||||||| || |||||| | ||||||| ||||||||||||||||| |||| ||||||||
Sbjct: 1370029 ggttgctttgtcgaaggcaattggttaaaaaatgcattcaggtggaaggaaactattggt 1370088
Query: 1128 ccatgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggc 1187
|||||||||||||| |||||||||| |||||||| ||||| |||||||| || ||||||
Sbjct: 1370089 ccatgggaagagagacctggacactatggagatgtctggcactactggacggatgatggc 1370148
Query: 1188 cttggatattatgagtt 1204
||||| |||||||||||
Sbjct: 1370149 cttgggtattatgagtt 1370165
Score = 147 bits (74), Expect = 2e-31
Identities = 110/122 (90%)
Strand = Plus / Plus
Query: 1455 ggtaattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatt 1514
||||||||||||||||| || ||||||||||| || ||||||| |||||||| ||||||
Sbjct: 1363522 ggtaattacctcaagttttataatgctataagggaggcctatccggacattcaaatgatt 1363581
Query: 1515 tcaaattgtgatggttcatctaaaccacttgaccatcctgctgatctgtatgacttccat 1574
||||||||||||| |||||| | |||||||||||||||||||||| | ||||||||||||
Sbjct: 1363582 tcaaattgtgatgcttcatcaagaccacttgaccatcctgctgatttatatgacttccat 1363641
Query: 1575 gt 1576
||
Sbjct: 1363642 gt 1363643
Score = 145 bits (73), Expect = 9e-31
Identities = 121/137 (88%)
Strand = Plus / Plus
Query: 1071 tgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggtcca 1130
||||| |||||||| || |||||||||||||| ||||||||||| ||| |||||||||||
Sbjct: 1400087 tgctttgttgaaggtgattggttaagaaatgctttcaggtggagagaaactattggtcca 1400146
Query: 1131 tgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggcctt 1190
|||||| |||| ||||| ||||| |||||||||| | |||| ||||| || ||||||||
Sbjct: 1400147 tgggaacagagacctgggcactttggagatgtttagaattattggaccgatgatggccta 1400206
Query: 1191 ggatattatgagtttct 1207
|||||||||||||||||
Sbjct: 1400207 ggatattatgagtttct 1400223
Score = 139 bits (70), Expect = 5e-29
Identities = 115/130 (88%)
Strand = Plus / Plus
Query: 1809 tggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactgg 1868
||||| |||||||| || |||||||||||||||||||| || |||||||||||||| |||
Sbjct: 1373094 tggaacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattgg 1373153
Query: 1869 atgcagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttcc 1928
||||||| | |||||| ||||| || ||||| |||||||||||||||| |||||||||
Sbjct: 1373154 atgcagacatatttccgtgaatcaagcggtgctatgattcatccaattatgatcagttcc 1373213
Query: 1929 agctactctg 1938
||||||||||
Sbjct: 1373214 agctactctg 1373223
Score = 133 bits (67), Expect = 3e-27
Identities = 118/135 (87%)
Strand = Plus / Plus
Query: 867 tggacaaaagtggagcaaaaattgattgctaaagggacaaacagaacctcaagacttcag 926
||||||||| ||||||| || ||| |||||||||| ||||| ||||||||||| |||||
Sbjct: 1361224 tggacaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaaggcttcaa 1361283
Query: 927 ataacatctaacaagaagggagttgtatggtttgatcaagtatcactcatgccttcagac 986
|||||| ||| |||||||||||||||||||||||||||||| || |||||| || |||||
Sbjct: 1361284 ataacaactaccaagaagggagttgtatggtttgatcaagtctctctcatgtctgcagac 1361343
Query: 987 acgttcaagggacat 1001
|| | ||||| ||||
Sbjct: 1361344 acttacaaggtacat 1361358
Score = 109 bits (55), Expect = 5e-20
Identities = 91/103 (88%)
Strand = Plus / Plus
Query: 1645 aggcctttgtcagtgagtatgcggtatggagaactgatgcaggtagaggaagccttcttg 1704
|||| ||||||||||| ||||| || ||||||| |||||||||||||||||| || ||||
Sbjct: 1364172 aggcttttgtcagtgaatatgctgtttggagaagtgatgcaggtagaggaagtctacttg 1364231
Query: 1705 gttcactggcagaggctgccttccttactgggctggagaagaa 1747
|||| ||||||| ||||| ||||||||||| |||||||||||
Sbjct: 1364232 cttcattggcagaagctgctttccttactggactggagaagaa 1364274
Score = 101 bits (51), Expect = 1e-17
Identities = 96/111 (86%)
Strand = Plus / Plus
Query: 725 gaacatagaagatggaaagacctacaatctagttatgtatgttaaatcagcagaagctgc 784
|||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| |||
Sbjct: 1360997 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 1361056
Query: 785 agaattgacagtttcattagcaagctccgatgggttgcagaatcttgcttc 835
|| ||||||||||| || |||| || ||||||| ||| ||||| |||||
Sbjct: 1361057 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttc 1361107
Score = 93.7 bits (47), Expect = 3e-15
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 1323 agtctagaatttgcaagggggagtgcaaactcaacatggggctctgttagagctgcaatg 1382
||||| || ||||||| |||||||| || ||||||||||||||||||||||| | |||
Sbjct: 1370624 agtcttgagtttgcaaaggggagtgacaaatcaacatggggctctgttagagccacgatg 1370683
Query: 1383 gggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatgaagattgtg 1437
||||| |||||||| |||||| | || ||||||||| | || |||||||||||||
Sbjct: 1370684 gggcaccctgaaccattcccactgaagtatgttgcactagggaatgaagattgtg 1370738
Score = 93.7 bits (47), Expect = 3e-15
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 1458 aattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatttca 1517
|||||||||||||| || |||||||| | | |||||||||||||||| |||||||||
Sbjct: 1401310 aattacctcaagttttatgatgctatacgcaaggcctatccagacattcaaatgatttca 1401369
Query: 1518 aattgtgatggttcatctaaaccacttgaccatcctgctgatctgta 1564
|| |||||||| ||||||| || |||||||||||||||||| ||||
Sbjct: 1401370 aactgtgatggatcatctaggccgcttgaccatcctgctgatttgta 1401416
Score = 87.7 bits (44), Expect = 2e-13
Identities = 155/192 (80%)
Strand = Plus / Plus
Query: 1809 tggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactgg 1868
||||| |||||||| || || ||||| |||||||| || || || ||||||||||| |||
Sbjct: 1402586 tggaacccagatgcaattgtgttcaattcctggcagcagtatggcactcctagttattgg 1402645
Query: 1869 atgcagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttcc 1928
|||||| | |||||| ||||| |||||| | |||||||||| ||||| |||||||||
Sbjct: 1402646 gtgcagacatatttccgtgaatcaagtggttctgtgattcatccgattacgatcagttcc 1402705
Query: 1929 agctactctggttctctagcagcatctgctatcacctggcaggattccgggaataacttc 1988
|| || |||| ||| | || || ||||| ||||||||||| || || | | ||| |||
Sbjct: 1402706 agatattctgattcattggctgcttctgcaatcacctggcaagactctgaggatatcttt 1402765
Query: 1989 ctgagagtaaag 2000
||||||||||||
Sbjct: 1402766 ctgagagtaaag 1402777
Score = 83.8 bits (42), Expect = 3e-12
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 994 agggacatggttttcgcaccgaactgatatccatgcttttggatctaaaaccacgattct 1053
||||||||||||||||||| ||||| ||||| ||| | ||||| |||||||||||||||
Sbjct: 1361499 agggacatggttttcgcacagaactaatatctatgatgttggacttaaaaccacgattct 1361558
Query: 1054 tgagatttcctggt 1067
||||||| ||||||
Sbjct: 1361559 tgagattccctggt 1361572
Score = 81.8 bits (41), Expect = 1e-11
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 2184 cagatgcaggtcacgctcgctgcccactccttctcctcgttcgaccttgcgcttgctcag 2243
|||||||| |||||||| ||| | ||||| |||||||| ||||| ||||||||||| |||
Sbjct: 1365131 cagatgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgcttgcccag 1365190
Query: 2244 tccgagcttgtcgcagagatgtgaagcag 2272
||| | || || |||||||||||||||||
Sbjct: 1365191 tccaaactcgtggcagagatgtgaagcag 1365219
Score = 81.8 bits (41), Expect = 1e-11
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1680 gatgcaggtagaggaagccttcttggttcactggcagaggctgccttccttactgggctg 1739
||||| |||| |||||||||||||| ||||||||| |||||||| |||||||||||| ||
Sbjct: 1402061 gatgctggtaaaggaagccttcttgcttcactggctgaggctgctttccttactgggttg 1402120
Query: 1740 gagaa 1744
|||||
Sbjct: 1402121 gagaa 1402125
Score = 77.8 bits (39), Expect = 2e-10
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 472 aggagatcaaccatgcaggagccggtggcatatgggcagaacttgttagtaatagaggt 530
|||| ||||||||||||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 1359718 aggaaatcaaccatgcaggagctggtggaatatgggctgaacttgttagtaacagaggt 1359776
Score = 71.9 bits (36), Expect = 1e-08
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 646 tcgctcttaggatggaggttctctgtgatgactgcccagccagtggtgttggcatttaca 705
||||||| ||||||||| |||||||||| | || ||||| | ||||||||||||||||
Sbjct: 1398467 tcgctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttaca 1398526
Query: 706 accctgggttctggggcatg 725
|||| || ||||||||||||
Sbjct: 1398527 acccaggattctggggcatg 1398546
Score = 61.9 bits (31), Expect = 1e-05
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 1466 caagttctacaatgctataagagaatcctatccagacattcagatgatttcaaattgtga 1525
|||||||||||| || |||| ||| | ||||| ||||| || || |||||||| |||||
Sbjct: 1371238 caagttctacaacgccataaaagaggcttatcctgacatccaaataatttcaaactgtga 1371297
Query: 1526 tggttcatctaaaccacttgaccatcctgctgatctgtatgacttccatgt 1576
||| || ||| |||||||| |||||||| ||||| ||||||| ||||||
Sbjct: 1371298 tggctcgtctgggccacttgatcatcctgccgatctctatgactaccatgt 1371348
Score = 61.9 bits (31), Expect = 1e-05
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 1748 cagtgatattgttcatatggcaagttatgcaccgctctttgtaaacgacaa 1798
||||||| ||||||| ||||||||||||||||| ||||| ||||| |||||
Sbjct: 1402434 cagtgatgttgttcagatggcaagttatgcaccactcttcgtaaatgacaa 1402484
Score = 60.0 bits (30), Expect = 4e-05
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1748 cagtgatattgttcatatggcaagttatgcaccgctctttgtaaacgacaacgatcaaac 1807
||||||| ||||||| ||||||||||||||||| || || || ||| |||| ||||||||
Sbjct: 1364414 cagtgatgttgttcagatggcaagttatgcaccactgttcgtgaacaacaatgatcaaac 1364473
Query: 1808 gt 1809
||
Sbjct: 1364474 gt 1364475
Score = 58.0 bits (29), Expect = 2e-04
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1210 agctttctgaagacctgggggctgctccaatctgggtattcaacaatgg 1258
|||||||||| |||||||| ||||| ||||||||||| || ||||||||
Sbjct: 1361934 agctttctgaggacctgggcgctgccccaatctgggtgtttaacaatgg 1361982
Score = 58.0 bits (29), Expect = 2e-04
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1257 ggaatcagccacaatgatgaagttagtaccgctgccattgccccttttgtaaa 1309
||||||||||| |||||||||||| ||| ||||| ||||| |||||||||||
Sbjct: 1362060 ggaatcagccataatgatgaagttgatactgctgcaattgctccttttgtaaa 1362112
Score = 56.0 bits (28), Expect = 6e-04
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 725 gaacatagaagatggaaagacctacaatctagttatgtat 764
|||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 1398930 gaacatagaagaaggaaagacctataatctagtcatgtat 1398969
Score = 54.0 bits (27), Expect = 0.003
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 954 tggtttgatcaagtatcactcatgccttcagacac 988
|||||||||||||| ||||||||||| ||||||||
Sbjct: 1399248 tggtttgatcaagtgtcactcatgccatcagacac 1399282
Score = 46.1 bits (23), Expect = 0.61
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 2067 aacgcgctggggtcaaacgctactgttctcacgtccagcaatgtaaaggatgaaaattct 2126
||||| ||||| |||| || |||||| |||| ||||||||||| | |||||| || |||
Sbjct: 1364902 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 1364961
Query: 2127 ttcagtaaccc 2137
|| ||||||||
Sbjct: 1364962 tttagtaaccc 1364972
Score = 46.1 bits (23), Expect = 0.61
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 994 agggacatggttttcgcaccgaactgatatccatgcttttggatctaaaaccacg 1048
|||| ||||||||||||| ||||| || | |||||||||||| ||||||||||
Sbjct: 1369880 agggccatggttttcgcaaggaactcatgtacatgcttttggacttaaaaccacg 1369934
>emb|BX000507.2 |CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 157453
Score = 222 bits (112), Expect = 5e-54
Identities = 133/140 (95%)
Strand = Plus / Minus
Query: 1068 ggttgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggt 1127
||||||||||| || || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 67492 ggttgcttcgtggagggtgaatggttaagaaacgcattcaggtggagggaatctattggt 67433
Query: 1128 ccatgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggc 1187
|||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 67432 ccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgatggc 67373
Query: 1188 cttggatattatgagtttct 1207
||||||||||||||||||||
Sbjct: 67372 cttggatattatgagtttct 67353
Score = 196 bits (99), Expect = 3e-46
Identities = 174/199 (87%)
Strand = Plus / Minus
Query: 527 aggttttgaagctggaggactccatacgccatcaaatattgacccatggtctataattgg 586
|||||||||||||||||| | ||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 68619 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 68560
Query: 587 cgacgactcttccatatttgtggcgactgatcgtacatcatgtttcagtcgaaacattat 646
|| ||||||||||||||||||||||||||||| || |||||||||||||| || | | |
Sbjct: 68559 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 68500
Query: 647 cgctcttaggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaa 706
||||| |||||||||||||||||||| | |||||||| |||||||||||||||| ||
Sbjct: 68499 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 68440
Query: 707 ccctgggttctggggcatg 725
||| || ||||||||||||
Sbjct: 68439 cccaggattctggggcatg 68421
Score = 192 bits (97), Expect = 4e-45
Identities = 169/193 (87%)
Strand = Plus / Minus
Query: 1808 gtggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactg 1867
|||||| ||||| || || || || |||||||||||||||||||||||||||||||||||
Sbjct: 64609 gtggaacccagacgccattgtatttaactcctggcaacaatacggaactcctagttactg 64550
Query: 1868 gatgcagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttc 1927
|||||||| ||||||| |||||||| ||||| ||| |||||||||||||||||| |||
Sbjct: 64549 gatgcagactcttttccgtgaatctagcggtgctatgtttcatccaattacaatcacttc 64490
Query: 1928 cagctactctggttctctagcagcatctgctatcacctggcaggattccgggaataactt 1987
|||||||||||||||||| ||||||||||| || || ||||||||||| | |||| |||
Sbjct: 64489 cagctactctggttctctggcagcatctgcaattacttggcaggattctgaaaatagctt 64430
Query: 1988 cctgagagtaaag 2000
| | |||||||||
Sbjct: 64429 cttaagagtaaag 64417
Score = 186 bits (94), Expect = 3e-43
Identities = 127/138 (92%)
Strand = Plus / Minus
Query: 1309 aggatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctg 1368
|||| |||||||| ||||||||||||||||||||||||||| | || |||||||| ||||
Sbjct: 66496 aggacgtattggacagtctagaatttgcaagggggagtgcagattcgacatggggttctg 66437
Query: 1369 ttagagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatg 1428
||||||||||||||||||| |||||||| ||||| |||||||| |||||||| |||||||
Sbjct: 66436 ttagagctgcaatggggcaccctgaaccattccctgtcaaatacgttgcaattggaaatg 66377
Query: 1429 aagattgtgggaaaaaat 1446
||||||||||||||||||
Sbjct: 66376 aagattgtgggaaaaaat 66359
Score = 161 bits (81), Expect = 1e-35
Identities = 120/133 (90%)
Strand = Plus / Minus
Query: 1309 aggatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctg 1368
||||||||||||||||||| |||||||||||||| || ||| | ||||||||||||||||
Sbjct: 28493 aggatgtattggatagtcttgaatttgcaaggggaagcgcagaatcaacatggggctctg 28434
Query: 1369 ttagagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatg 1428
||||| |||||||||||||||| |||| ||||||| | || |||||||| || |||||||
Sbjct: 28433 ttagatctgcaatggggcatcccgaacggttcccactgaagtatgttgctattggaaatg 28374
Query: 1429 aagattgtgggaa 1441
|||||||||||||
Sbjct: 28373 aagattgtgggaa 28361
Score = 153 bits (77), Expect = 4e-33
Identities = 122/137 (89%)
Strand = Plus / Minus
Query: 1068 ggttgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggt 1127
|||||||| || |||||| | ||||||| ||||||||||||||||| |||| ||||||||
Sbjct: 59140 ggttgctttgtcgaaggcaattggttaaaaaatgcattcaggtggaaggaaactattggt 59081
Query: 1128 ccatgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggc 1187
|||||||||||||| |||||||||| |||||||| ||||| |||||||| || ||||||
Sbjct: 59080 ccatgggaagagagacctggacactatggagatgtctggcactactggacggatgatggc 59021
Query: 1188 cttggatattatgagtt 1204
||||| |||||||||||
Sbjct: 59020 cttgggtattatgagtt 59004
Score = 147 bits (74), Expect = 2e-31
Identities = 110/122 (90%)
Strand = Plus / Minus
Query: 1455 ggtaattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatt 1514
||||||||||||||||| || ||||||||||| || ||||||| |||||||| ||||||
Sbjct: 65647 ggtaattacctcaagttttataatgctataagggaggcctatccggacattcaaatgatt 65588
Query: 1515 tcaaattgtgatggttcatctaaaccacttgaccatcctgctgatctgtatgacttccat 1574
||||||||||||| |||||| | |||||||||||||||||||||| | ||||||||||||
Sbjct: 65587 tcaaattgtgatgcttcatcaagaccacttgaccatcctgctgatttatatgacttccat 65528
Query: 1575 gt 1576
||
Sbjct: 65527 gt 65526
Score = 145 bits (73), Expect = 9e-31
Identities = 121/137 (88%)
Strand = Plus / Minus
Query: 1071 tgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggtcca 1130
||||| |||||||| || |||||||||||||| ||||||||||| ||| |||||||||||
Sbjct: 29082 tgctttgttgaaggtgattggttaagaaatgctttcaggtggagagaaactattggtcca 29023
Query: 1131 tgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggcctt 1190
|||||| |||| ||||| ||||| |||||||||| | |||| ||||| || ||||||||
Sbjct: 29022 tgggaacagagacctgggcactttggagatgtttagaattattggaccgatgatggccta 28963
Query: 1191 ggatattatgagtttct 1207
|||||||||||||||||
Sbjct: 28962 ggatattatgagtttct 28946
Score = 139 bits (70), Expect = 5e-29
Identities = 115/130 (88%)
Strand = Plus / Minus
Query: 1809 tggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactgg 1868
||||| |||||||| || |||||||||||||||||||| || |||||||||||||| |||
Sbjct: 56075 tggaacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattgg 56016
Query: 1869 atgcagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttcc 1928
||||||| | |||||| ||||| || ||||| |||||||||||||||| |||||||||
Sbjct: 56015 atgcagacatatttccgtgaatcaagcggtgctatgattcatccaattatgatcagttcc 55956
Query: 1929 agctactctg 1938
||||||||||
Sbjct: 55955 agctactctg 55946
Score = 133 bits (67), Expect = 3e-27
Identities = 118/135 (87%)
Strand = Plus / Minus
Query: 867 tggacaaaagtggagcaaaaattgattgctaaagggacaaacagaacctcaagacttcag 926
||||||||| ||||||| || ||| |||||||||| ||||| ||||||||||| |||||
Sbjct: 67945 tggacaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaaggcttcaa 67886
Query: 927 ataacatctaacaagaagggagttgtatggtttgatcaagtatcactcatgccttcagac 986
|||||| ||| |||||||||||||||||||||||||||||| || |||||| || |||||
Sbjct: 67885 ataacaactaccaagaagggagttgtatggtttgatcaagtctctctcatgtctgcagac 67826
Query: 987 acgttcaagggacat 1001
|| | ||||| ||||
Sbjct: 67825 acttacaaggtacat 67811
Score = 109 bits (55), Expect = 5e-20
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 1645 aggcctttgtcagtgagtatgcggtatggagaactgatgcaggtagaggaagccttcttg 1704
|||| ||||||||||| ||||| || ||||||| |||||||||||||||||| || ||||
Sbjct: 64997 aggcttttgtcagtgaatatgctgtttggagaagtgatgcaggtagaggaagtctacttg 64938
Query: 1705 gttcactggcagaggctgccttccttactgggctggagaagaa 1747
|||| ||||||| ||||| ||||||||||| |||||||||||
Sbjct: 64937 cttcattggcagaagctgctttccttactggactggagaagaa 64895
Score = 101 bits (51), Expect = 1e-17
Identities = 96/111 (86%)
Strand = Plus / Minus
Query: 725 gaacatagaagatggaaagacctacaatctagttatgtatgttaaatcagcagaagctgc 784
|||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| |||
Sbjct: 68172 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 68113
Query: 785 agaattgacagtttcattagcaagctccgatgggttgcagaatcttgcttc 835
|| ||||||||||| || |||| || ||||||| ||| ||||| |||||
Sbjct: 68112 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttc 68062
Score = 93.7 bits (47), Expect = 3e-15
Identities = 92/107 (85%)
Strand = Plus / Minus
Query: 1458 aattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatttca 1517
|||||||||||||| || |||||||| | | |||||||||||||||| |||||||||
Sbjct: 27859 aattacctcaagttttatgatgctatacgcaaggcctatccagacattcaaatgatttca 27800
Query: 1518 aattgtgatggttcatctaaaccacttgaccatcctgctgatctgta 1564
|| |||||||| ||||||| || |||||||||||||||||| ||||
Sbjct: 27799 aactgtgatggatcatctaggccgcttgaccatcctgctgatttgta 27753
Score = 93.7 bits (47), Expect = 3e-15
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 1323 agtctagaatttgcaagggggagtgcaaactcaacatggggctctgttagagctgcaatg 1382
||||| || ||||||| |||||||| || ||||||||||||||||||||||| | |||
Sbjct: 58545 agtcttgagtttgcaaaggggagtgacaaatcaacatggggctctgttagagccacgatg 58486
Query: 1383 gggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatgaagattgtg 1437
||||| |||||||| |||||| | || ||||||||| | || |||||||||||||
Sbjct: 58485 gggcaccctgaaccattcccactgaagtatgttgcactagggaatgaagattgtg 58431
Score = 87.7 bits (44), Expect = 2e-13
Identities = 155/192 (80%)
Strand = Plus / Minus
Query: 1809 tggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactgg 1868
||||| |||||||| || || ||||| |||||||| || || || ||||||||||| |||
Sbjct: 26583 tggaacccagatgcaattgtgttcaattcctggcagcagtatggcactcctagttattgg 26524
Query: 1869 atgcagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttcc 1928
|||||| | |||||| ||||| |||||| | |||||||||| ||||| |||||||||
Sbjct: 26523 gtgcagacatatttccgtgaatcaagtggttctgtgattcatccgattacgatcagttcc 26464
Query: 1929 agctactctggttctctagcagcatctgctatcacctggcaggattccgggaataacttc 1988
|| || |||| ||| | || || ||||| ||||||||||| || || | | ||| |||
Sbjct: 26463 agatattctgattcattggctgcttctgcaatcacctggcaagactctgaggatatcttt 26404
Query: 1989 ctgagagtaaag 2000
||||||||||||
Sbjct: 26403 ctgagagtaaag 26392
Score = 83.8 bits (42), Expect = 3e-12
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 994 agggacatggttttcgcaccgaactgatatccatgcttttggatctaaaaccacgattct 1053
||||||||||||||||||| ||||| ||||| ||| | ||||| |||||||||||||||
Sbjct: 67670 agggacatggttttcgcacagaactaatatctatgatgttggacttaaaaccacgattct 67611
Query: 1054 tgagatttcctggt 1067
||||||| ||||||
Sbjct: 67610 tgagattccctggt 67597
Score = 81.8 bits (41), Expect = 1e-11
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 1680 gatgcaggtagaggaagccttcttggttcactggcagaggctgccttccttactgggctg 1739
||||| |||| |||||||||||||| ||||||||| |||||||| |||||||||||| ||
Sbjct: 27108 gatgctggtaaaggaagccttcttgcttcactggctgaggctgctttccttactgggttg 27049
Query: 1740 gagaa 1744
|||||
Sbjct: 27048 gagaa 27044
Score = 81.8 bits (41), Expect = 1e-11
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 2184 cagatgcaggtcacgctcgctgcccactccttctcctcgttcgaccttgcgcttgctcag 2243
|||||||| |||||||| ||| | ||||| |||||||| ||||| ||||||||||| |||
Sbjct: 64038 cagatgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgcttgcccag 63979
Query: 2244 tccgagcttgtcgcagagatgtgaagcag 2272
||| | || || |||||||||||||||||
Sbjct: 63978 tccaaactcgtggcagagatgtgaagcag 63950
Score = 77.8 bits (39), Expect = 2e-10
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 472 aggagatcaaccatgcaggagccggtggcatatgggcagaacttgttagtaatagaggt 530
|||| ||||||||||||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 69451 aggaaatcaaccatgcaggagctggtggaatatgggctgaacttgttagtaacagaggt 69393
Score = 71.9 bits (36), Expect = 1e-08
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 646 tcgctcttaggatggaggttctctgtgatgactgcccagccagtggtgttggcatttaca 705
||||||| ||||||||| |||||||||| | || ||||| | ||||||||||||||||
Sbjct: 30702 tcgctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttaca 30643
Query: 706 accctgggttctggggcatg 725
|||| || ||||||||||||
Sbjct: 30642 acccaggattctggggcatg 30623
Score = 61.9 bits (31), Expect = 1e-05
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 1748 cagtgatattgttcatatggcaagttatgcaccgctctttgtaaacgacaa 1798
||||||| ||||||| ||||||||||||||||| ||||| ||||| |||||
Sbjct: 26735 cagtgatgttgttcagatggcaagttatgcaccactcttcgtaaatgacaa 26685
Score = 61.9 bits (31), Expect = 1e-05
Identities = 91/111 (81%)
Strand = Plus / Minus
Query: 1466 caagttctacaatgctataagagaatcctatccagacattcagatgatttcaaattgtga 1525
|||||||||||| || |||| ||| | ||||| ||||| || || |||||||| |||||
Sbjct: 57931 caagttctacaacgccataaaagaggcttatcctgacatccaaataatttcaaactgtga 57872
Query: 1526 tggttcatctaaaccacttgaccatcctgctgatctgtatgacttccatgt 1576
||| || ||| |||||||| |||||||| ||||| ||||||| ||||||
Sbjct: 57871 tggctcgtctgggccacttgatcatcctgccgatctctatgactaccatgt 57821
Score = 60.0 bits (30), Expect = 4e-05
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 1748 cagtgatattgttcatatggcaagttatgcaccgctctttgtaaacgacaacgatcaaac 1807
||||||| ||||||| ||||||||||||||||| || || || ||| |||| ||||||||
Sbjct: 64755 cagtgatgttgttcagatggcaagttatgcaccactgttcgtgaacaacaatgatcaaac 64696
Query: 1808 gt 1809
||
Sbjct: 64695 gt 64694
Score = 58.0 bits (29), Expect = 2e-04
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1257 ggaatcagccacaatgatgaagttagtaccgctgccattgccccttttgtaaa 1309
||||||||||| |||||||||||| ||| ||||| ||||| |||||||||||
Sbjct: 67109 ggaatcagccataatgatgaagttgatactgctgcaattgctccttttgtaaa 67057
Score = 58.0 bits (29), Expect = 2e-04
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1210 agctttctgaagacctgggggctgctccaatctgggtattcaacaatgg 1258
|||||||||| |||||||| ||||| ||||||||||| || ||||||||
Sbjct: 67235 agctttctgaggacctgggcgctgccccaatctgggtgtttaacaatgg 67187
Score = 56.0 bits (28), Expect = 6e-04
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 725 gaacatagaagatggaaagacctacaatctagttatgtat 764
|||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 30239 gaacatagaagaaggaaagacctataatctagtcatgtat 30200
Score = 54.0 bits (27), Expect = 0.003
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 954 tggtttgatcaagtatcactcatgccttcagacac 988
|||||||||||||| ||||||||||| ||||||||
Sbjct: 29921 tggtttgatcaagtgtcactcatgccatcagacac 29887
Score = 46.1 bits (23), Expect = 0.61
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 994 agggacatggttttcgcaccgaactgatatccatgcttttggatctaaaaccacg 1048
|||| ||||||||||||| ||||| || | |||||||||||| ||||||||||
Sbjct: 59289 agggccatggttttcgcaaggaactcatgtacatgcttttggacttaaaaccacg 59235
Score = 46.1 bits (23), Expect = 0.61
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 2067 aacgcgctggggtcaaacgctactgttctcacgtccagcaatgtaaaggatgaaaattct 2126
||||| ||||| |||| || |||||| |||| ||||||||||| | |||||| || |||
Sbjct: 64267 aacgcactgggatcaactgccactgttatcacatccagcaatgtgatggatgagaactct 64208
Query: 2127 ttcagtaaccc 2137
|| ||||||||
Sbjct: 64207 tttagtaaccc 64197
>ref|NM_001072595.1 | Oryza sativa (japonica cultivar-group) Os12g0128800 (Os12g0128800)
mRNA, partial cds
Length = 2780
Score = 220 bits (111), Expect = 2e-53
Identities = 276/331 (83%)
Strand = Plus / Plus
Query: 898 aagggacaaacagaacctcaagacttcagataacatctaacaagaagggagttgtatggt 957
|||||||| |||||| ||||||||| | ||||| ||| || | |||||| |||||
Sbjct: 921 aagggacatgcagaacttcaagacttgaactaacaactaggaaaaggggagtaatatggc 980
Query: 958 ttgatcaagtatcactcatgccttcagacacgttcaagggacatggttttcgcaccgaac 1017
||||||| || ||||| ||||||||||| || | |||||| ||||||||||||| ||||
Sbjct: 981 ttgatcaggtgtcacttatgccttcagaaacatacaagggccatggttttcgcaaggaac 1040
Query: 1018 tgatatccatgcttttggatctaaaaccacgattcttgagatttcctggtggttgcttcg 1077
| || | |||||||||||| |||||||||| || | | |||||||| |||||||| |
Sbjct: 1041 tcatgtacatgcttttggacttaaaaccacggtttctacggtttcctgggggttgctttg 1100
Query: 1078 ttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggtccatgggaag 1137
| |||||| | ||||||| ||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 1101 tcgaaggcaattggttaaaaaatgcattcaggtggaaggaaactattggtccatgggaag 1160
Query: 1138 agaggcctggacacttcggagatgtttggcattactggactgacgatggccttggatatt 1197
|||| |||||||||| |||||||| ||||| |||||||| || ||||||||||| ||||
Sbjct: 1161 agagacctggacactatggagatgtctggcactactggacggatgatggccttgggtatt 1220
Query: 1198 atgagtttcttcagctttctgaagacctggg 1228
||||||| || ||||| |||||||| ||||
Sbjct: 1221 atgagttactcgagcttgctgaagacttggg 1251
Score = 182 bits (92), Expect = 4e-42
Identities = 266/324 (82%)
Strand = Plus / Plus
Query: 1692 ggaagccttcttggttcactggcagaggctgccttccttactgggctggagaagaacagt 1751
||||||||||||| ||| ||||||| ||||| ||||| | ||| | ||||| || |||
Sbjct: 1721 ggaagccttcttgcatcattggcagaagctgctttcctaattggtttagagaaaaatagt 1780
Query: 1752 gatattgttcatatggcaagttatgcaccgctctttgtaaacgacaacgatcaaacgtgg 1811
||| | ||||| |||||| |||||||||| ||||| || || |||||||||| |||
Sbjct: 1781 gatgtcgttcagatggcatgttatgcaccactcttcgtgaatgacaacgatcgcgtctgg 1840
Query: 1812 aatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactggatg 1871
|| |||||||| || |||||||||||||||||||| || |||||||||||||| ||||||
Sbjct: 1841 aacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattggatg 1900
Query: 1872 cagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttccagc 1931
|||| | |||||| ||||| || ||||| |||||||||||||||| ||||||||||||
Sbjct: 1901 cagacatatttccgtgaatcaagcggtgctatgattcatccaattatgatcagttccagc 1960
Query: 1932 tactctggttctctagcagcatctgctatcacctggcaggattccgggaataacttcctg 1991
||||||| || | || || ||||| ||||||||||| || | | ||||| ||| |||
Sbjct: 1961 tactctgatttattggctgcctctgcaatcacctggcaagacgctgagaatacctttctg 2020
Query: 1992 agagtaaagattgtgaacttcggg 2015
||||| ||||| || |||||||||
Sbjct: 2021 agagtgaagatagtaaacttcggg 2044
Score = 93.7 bits (47), Expect = 3e-15
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 1323 agtctagaatttgcaagggggagtgcaaactcaacatggggctctgttagagctgcaatg 1382
||||| || ||||||| |||||||| || ||||||||||||||||||||||| | |||
Sbjct: 1346 agtcttgagtttgcaaaggggagtgacaaatcaacatggggctctgttagagccacgatg 1405
Query: 1383 gggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatgaagattgtg 1437
||||| |||||||| |||||| | || ||||||||| | || |||||||||||||
Sbjct: 1406 gggcaccctgaaccattcccactgaagtatgttgcactagggaatgaagattgtg 1460
Score = 67.9 bits (34), Expect = 2e-07
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 654 aggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaaccctggg 713
||||| |||||| ||||||| || || |||||| |||||||||| |||||||| || ||
Sbjct: 677 aggatagaggttgtctgtgacgattgtccagccggtggtgttggaatttacaatccagga 736
Query: 714 ttctggggcatgaacatagaagatggaaag 743
|| ||||||||||| ||||||| ||||||
Sbjct: 737 ttttggggcatgaatgtagaagaaggaaag 766
Score = 58.0 bits (29), Expect = 2e-04
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 1466 caagttctacaatgctataagagaatcctatccagacattcagatgatttcaaattgtga 1525
|||||||||||| || |||| ||| | ||||| ||||| || || |||||||| |||||
Sbjct: 1495 caagttctacaacgccataaaagaggcttatcctgacatccaaataatttcaaactgtga 1554
Query: 1526 tggttcatctaaaccacttgaccatcctgctgatctgtatgacttccat 1574
||| || ||| |||||||| |||||||| ||||| ||||||| ||||
Sbjct: 1555 tggctcgtctgggccacttgatcatcctgccgatctctatgactaccat 1603
Score = 42.1 bits (21), Expect = 9.5
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 2088 actgttctcacgtccagcaatgtaaaggatgaaaattctttcagtaacccaaccaaggtc 2147
||||||||||| |||||||| | |||||||||||| || ||| | |||| |||||||
Sbjct: 2117 actgttctcacatccagcaacttgctggatgaaaattcatttagtgaaccaaacaaggtc 2176
Query: 2148 gtgcc 2152
|||||
Sbjct: 2177 gtgcc 2181
>dbj|AK103721.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033138B08, full
insert sequence
Length = 2783
Score = 220 bits (111), Expect = 2e-53
Identities = 276/331 (83%)
Strand = Plus / Plus
Query: 898 aagggacaaacagaacctcaagacttcagataacatctaacaagaagggagttgtatggt 957
|||||||| |||||| ||||||||| | ||||| ||| || | |||||| |||||
Sbjct: 924 aagggacatgcagaacttcaagacttgaactaacaactaggaaaaggggagtaatatggc 983
Query: 958 ttgatcaagtatcactcatgccttcagacacgttcaagggacatggttttcgcaccgaac 1017
||||||| || ||||| ||||||||||| || | |||||| ||||||||||||| ||||
Sbjct: 984 ttgatcaggtgtcacttatgccttcagaaacatacaagggccatggttttcgcaaggaac 1043
Query: 1018 tgatatccatgcttttggatctaaaaccacgattcttgagatttcctggtggttgcttcg 1077
| || | |||||||||||| |||||||||| || | | |||||||| |||||||| |
Sbjct: 1044 tcatgtacatgcttttggacttaaaaccacggtttctacggtttcctgggggttgctttg 1103
Query: 1078 ttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggtccatgggaag 1137
| |||||| | ||||||| ||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 1104 tcgaaggcaattggttaaaaaatgcattcaggtggaaggaaactattggtccatgggaag 1163
Query: 1138 agaggcctggacacttcggagatgtttggcattactggactgacgatggccttggatatt 1197
|||| |||||||||| |||||||| ||||| |||||||| || ||||||||||| ||||
Sbjct: 1164 agagacctggacactatggagatgtctggcactactggacggatgatggccttgggtatt 1223
Query: 1198 atgagtttcttcagctttctgaagacctggg 1228
||||||| || ||||| |||||||| ||||
Sbjct: 1224 atgagttactcgagcttgctgaagacttggg 1254
Score = 182 bits (92), Expect = 4e-42
Identities = 266/324 (82%)
Strand = Plus / Plus
Query: 1692 ggaagccttcttggttcactggcagaggctgccttccttactgggctggagaagaacagt 1751
||||||||||||| ||| ||||||| ||||| ||||| | ||| | ||||| || |||
Sbjct: 1724 ggaagccttcttgcatcattggcagaagctgctttcctaattggtttagagaaaaatagt 1783
Query: 1752 gatattgttcatatggcaagttatgcaccgctctttgtaaacgacaacgatcaaacgtgg 1811
||| | ||||| |||||| |||||||||| ||||| || || |||||||||| |||
Sbjct: 1784 gatgtcgttcagatggcatgttatgcaccactcttcgtgaatgacaacgatcgcgtctgg 1843
Query: 1812 aatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactggatg 1871
|| |||||||| || |||||||||||||||||||| || |||||||||||||| ||||||
Sbjct: 1844 aacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattggatg 1903
Query: 1872 cagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttccagc 1931
|||| | |||||| ||||| || ||||| |||||||||||||||| ||||||||||||
Sbjct: 1904 cagacatatttccgtgaatcaagcggtgctatgattcatccaattatgatcagttccagc 1963
Query: 1932 tactctggttctctagcagcatctgctatcacctggcaggattccgggaataacttcctg 1991
||||||| || | || || ||||| ||||||||||| || | | ||||| ||| |||
Sbjct: 1964 tactctgatttattggctgcctctgcaatcacctggcaagacgctgagaatacctttctg 2023
Query: 1992 agagtaaagattgtgaacttcggg 2015
||||| ||||| || |||||||||
Sbjct: 2024 agagtgaagatagtaaacttcggg 2047
Score = 93.7 bits (47), Expect = 3e-15
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 1323 agtctagaatttgcaagggggagtgcaaactcaacatggggctctgttagagctgcaatg 1382
||||| || ||||||| |||||||| || ||||||||||||||||||||||| | |||
Sbjct: 1349 agtcttgagtttgcaaaggggagtgacaaatcaacatggggctctgttagagccacgatg 1408
Query: 1383 gggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatgaagattgtg 1437
||||| |||||||| |||||| | || ||||||||| | || |||||||||||||
Sbjct: 1409 gggcaccctgaaccattcccactgaagtatgttgcactagggaatgaagattgtg 1463
Score = 67.9 bits (34), Expect = 2e-07
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 654 aggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaaccctggg 713
||||| |||||| ||||||| || || |||||| |||||||||| |||||||| || ||
Sbjct: 680 aggatagaggttgtctgtgacgattgtccagccggtggtgttggaatttacaatccagga 739
Query: 714 ttctggggcatgaacatagaagatggaaag 743
|| ||||||||||| ||||||| ||||||
Sbjct: 740 ttttggggcatgaatgtagaagaaggaaag 769
Score = 58.0 bits (29), Expect = 2e-04
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 1466 caagttctacaatgctataagagaatcctatccagacattcagatgatttcaaattgtga 1525
|||||||||||| || |||| ||| | ||||| ||||| || || |||||||| |||||
Sbjct: 1498 caagttctacaacgccataaaagaggcttatcctgacatccaaataatttcaaactgtga 1557
Query: 1526 tggttcatctaaaccacttgaccatcctgctgatctgtatgacttccat 1574
||| || ||| |||||||| |||||||| ||||| ||||||| ||||
Sbjct: 1558 tggctcgtctgggccacttgatcatcctgccgatctctatgactaccat 1606
Score = 42.1 bits (21), Expect = 9.5
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 2088 actgttctcacgtccagcaatgtaaaggatgaaaattctttcagtaacccaaccaaggtc 2147
||||||||||| |||||||| | |||||||||||| || ||| | |||| |||||||
Sbjct: 2120 actgttctcacatccagcaacttgctggatgaaaattcatttagtgaaccaaacaaggtc 2179
Query: 2148 gtgcc 2152
|||||
Sbjct: 2180 gtgcc 2184
>dbj|AK119404.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-132-E09, full
insert sequence
Length = 3254
Score = 216 bits (109), Expect = 3e-52
Identities = 235/277 (84%)
Strand = Plus / Plus
Query: 952 tatggtttgatcaagtatcactcatgccttcagacacgttcaagggacatggttttcgca 1011
||||| ||||||| || ||||| ||||||||||| || | |||||| |||||||||||||
Sbjct: 906 tatggcttgatcaggtgtcacttatgccttcagaaacatacaagggccatggttttcgca 965
Query: 1012 ccgaactgatatccatgcttttggatctaaaaccacgattcttgagatttcctggtggtt 1071
||||| || | |||||||||||| |||||||||| || | | |||||||| ||||
Sbjct: 966 aggaactcatgtacatgcttttggacttaaaaccacggtttctacggtttcctgggggtt 1025
Query: 1072 gcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggtccat 1131
|||| || |||||| | ||||||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 1026 gctttgtcgaaggcaattggttaaaaaatgcattcaggtggaaggaaactattggtccat 1085
Query: 1132 gggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggccttg 1191
|||||||||| |||||||||| |||||||| ||||| |||||||| || ||||||||||
Sbjct: 1086 gggaagagagacctggacactatggagatgtctggcactactggacggatgatggccttg 1145
Query: 1192 gatattatgagtttcttcagctttctgaagacctggg 1228
| ||||||||||| || ||||| |||||||| ||||
Sbjct: 1146 ggtattatgagttactcgagcttgctgaagacttggg 1182
Score = 182 bits (92), Expect = 4e-42
Identities = 266/324 (82%)
Strand = Plus / Plus
Query: 1692 ggaagccttcttggttcactggcagaggctgccttccttactgggctggagaagaacagt 1751
||||||||||||| ||| ||||||| ||||| ||||| | ||| | ||||| || |||
Sbjct: 1533 ggaagccttcttgcatcattggcagaagctgctttcctaattggtttagagaaaaatagt 1592
Query: 1752 gatattgttcatatggcaagttatgcaccgctctttgtaaacgacaacgatcaaacgtgg 1811
||| | ||||| |||||| |||||||||| ||||| || || |||||||||| |||
Sbjct: 1593 gatgtcgttcagatggcatgttatgcaccactcttcgtgaatgacaacgatcgcgtctgg 1652
Query: 1812 aatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactggatg 1871
|| |||||||| || |||||||||||||||||||| || |||||||||||||| ||||||
Sbjct: 1653 aacccagatgcgattgtcttcaactcctggcaacagtatggaactcctagttattggatg 1712
Query: 1872 cagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttccagc 1931
|||| | |||||| ||||| || ||||| |||||||||||||||| ||||||||||||
Sbjct: 1713 cagacatatttccgtgaatcaagcggtgctatgattcatccaattatgatcagttccagc 1772
Query: 1932 tactctggttctctagcagcatctgctatcacctggcaggattccgggaataacttcctg 1991
||||||| || | || || ||||| ||||||||||| || | | ||||| ||| |||
Sbjct: 1773 tactctgatttattggctgcctctgcaatcacctggcaagacgctgagaatacctttctg 1832
Query: 1992 agagtaaagattgtgaacttcggg 2015
||||| ||||| || |||||||||
Sbjct: 1833 agagtgaagatagtaaacttcggg 1856
Score = 93.7 bits (47), Expect = 3e-15
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 1323 agtctagaatttgcaagggggagtgcaaactcaacatggggctctgttagagctgcaatg 1382
||||| || ||||||| |||||||| || ||||||||||||||||||||||| | |||
Sbjct: 1277 agtcttgagtttgcaaaggggagtgacaaatcaacatggggctctgttagagccacgatg 1336
Query: 1383 gggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatgaagattgtg 1437
||||| |||||||| |||||| | || ||||||||| | || |||||||||||||
Sbjct: 1337 gggcaccctgaaccattcccactgaagtatgttgcactagggaatgaagattgtg 1391
Score = 67.9 bits (34), Expect = 2e-07
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 654 aggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaaccctggg 713
||||| |||||| ||||||| || || |||||| |||||||||| |||||||| || ||
Sbjct: 608 aggatagaggttgtctgtgacgattgtccagccggtggtgttggaatttacaatccagga 667
Query: 714 ttctggggcatgaacatagaagatggaaag 743
|| ||||||||||| ||||||| ||||||
Sbjct: 668 ttttggggcatgaatgtagaagaaggaaag 697
Score = 42.1 bits (21), Expect = 9.5
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 2088 actgttctcacgtccagcaatgtaaaggatgaaaattctttcagtaacccaaccaaggtc 2147
||||||||||| |||||||| | |||||||||||| || ||| | |||| |||||||
Sbjct: 1929 actgttctcacatccagcaacttgctggatgaaaattcatttagtgaaccaaacaaggtc 1988
Query: 2148 gtgcc 2152
|||||
Sbjct: 1989 gtgcc 1993
>gb|AC123516.2 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0035B18, complete sequence
Length = 123425
Score = 204 bits (103), Expect = 1e-48
Identities = 175/199 (87%)
Strand = Plus / Plus
Query: 527 aggttttgaagctggaggactccatacgccatcaaatattgacccatggtctataattgg 586
|||||||||||||||||| | ||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 75208 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 75267
Query: 587 cgacgactcttccatatttgtggcgactgatcgtacatcatgtttcagtcgaaacattat 646
|| ||||||||||||||||||||||||||||| || |||||||| ||||| || | | |
Sbjct: 75268 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 75327
Query: 647 cgctcttaggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaa 706
||||| ||||||||||||||||||||| | |||||||| |||||||||||||||| ||
Sbjct: 75328 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 75387
Query: 707 ccctgggttctggggcatg 725
||| |||||||||||||||
Sbjct: 75388 cccagggttctggggcatg 75406
Score = 198 bits (100), Expect = 7e-47
Identities = 130/140 (92%)
Strand = Plus / Plus
Query: 1068 ggttgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggt 1127
|||||||| || || || ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 76324 ggttgctttgtggagggggaatggttaaggaacgcattcaggtggagggaatctattggt 76383
Query: 1128 ccatgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggc 1187
|||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 76384 ccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgatggc 76443
Query: 1188 cttggatattatgagtttct 1207
|||||||||||||| |||||
Sbjct: 76444 cttggatattatgaatttct 76463
Score = 170 bits (86), Expect = 2e-38
Identities = 125/138 (90%)
Strand = Plus / Plus
Query: 1309 aggatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctg 1368
|||| |||||||| |||||||||||||||||||||| |||| | ||||||||||| ||||
Sbjct: 77300 aggacgtattggacagtctagaatttgcaagggggaatgcagattcaacatggggttctg 77359
Query: 1369 ttagagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatg 1428
||||||||||||||||||| || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 77360 ttagagctgcaatggggcaccccgaaccattccctgtcaaatacgtcgcaattggaaatg 77419
Query: 1429 aagattgtgggaaaaaat 1446
||||||||||||||||||
Sbjct: 77420 aagattgtgggaaaaaat 77437
Score = 168 bits (85), Expect = 6e-38
Identities = 166/193 (86%)
Strand = Plus / Plus
Query: 1808 gtggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactg 1867
|||||| ||||| || || || || ||||||||||||||||| |||||||||||||||||
Sbjct: 79055 gtggaacccagacgccattgtatttaactcctggcaacaatatggaactcctagttactg 79114
Query: 1868 gatgcagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttc 1927
|||||||| ||||| | |||||||| ||||| ||| |||||||| ||||||||| |||
Sbjct: 79115 gatgcagactcttttcggtgaatctagcggtgctatgtttcatccagttacaatcacttc 79174
Query: 1928 cagctactctggttctctagcagcatctgctatcacctggcaggattccgggaataactt 1987
|||||||||||||||||| ||||||||||| || || ||||||||||| | |||| |||
Sbjct: 79175 cagctactctggttctctggcagcatctgcaattacttggcaggattctgaaaatagctt 79234
Query: 1988 cctgagagtaaag 2000
| | |||||||||
Sbjct: 79235 cttaagagtaaag 79247
Score = 153 bits (77), Expect = 4e-33
Identities = 122/137 (89%)
Strand = Plus / Plus
Query: 1071 tgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggtcca 1130
||||| ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 108126 tgctttgttgaaggcgattggttaagaaatgctttcaggtggagggaaactattggtccc 108185
Query: 1131 tgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggcctt 1190
|||||| |||| ||||| ||||| |||||||||||| |||| ||||| || ||||||||
Sbjct: 108186 tgggaacagagacctgggcactttggagatgtttggaattattggaccgatgatggccta 108245
Query: 1191 ggatattatgagtttct 1207
|||||||| ||||||||
Sbjct: 108246 ggatattacgagtttct 108262
Score = 153 bits (77), Expect = 4e-33
Identities = 116/129 (89%)
Strand = Plus / Plus
Query: 1309 aggatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctg 1368
||||||||||||||||||| ||||||||||||||||| ||| | || |||||||| ||||
Sbjct: 108715 aggatgtattggatagtcttgaatttgcaagggggagagcagaatcgacatggggttctg 108774
Query: 1369 ttagagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatg 1428
|||||||||||||||||||||| |||| ||||||| | || |||||||| || |||||||
Sbjct: 108775 ttagagctgcaatggggcatccagaacggttcccactgaagtatgttgctattggaaatg 108834
Query: 1429 aagattgtg 1437
|||||||||
Sbjct: 108835 aagattgtg 108843
Score = 151 bits (76), Expect = 1e-32
Identities = 124/140 (88%)
Strand = Plus / Plus
Query: 1068 ggttgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggt 1127
|||||||| ||||||||| | ||||||| |||||| |||||||||| |||| ||||||||
Sbjct: 84296 ggttgctttgttgaaggcaattggttaaaaaatgcgttcaggtggaaggaaactattggt 84355
Query: 1128 ccatgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggc 1187
|||||||||||||| ||||| |||| |||||||||||||| |||||||| || ||||||
Sbjct: 84356 ccatgggaagagagacctgggcactatggagatgtttggcactactggaccgatgatggc 84415
Query: 1188 cttggatattatgagtttct 1207
||||| |||||||| |||||
Sbjct: 84416 cttgggtattatgactttct 84435
Score = 149 bits (75), Expect = 6e-32
Identities = 120/135 (88%)
Strand = Plus / Plus
Query: 867 tggacaaaagtggagcaaaaattgattgctaaagggacaaacagaacctcaagacttcag 926
||||||||| ||||||| || ||| ||||| |||| ||||| ||||||||||| |||||
Sbjct: 75873 tggacaaaactggagcagaagttggttgctcaaggaacaaatagaacctcaaggcttcaa 75932
Query: 927 ataacatctaacaagaagggagttgtatggtttgatcaagtatcactcatgccttcagac 986
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 75933 ataacaactaacaagaagggagttgtatggtttgatcaagtatcgctcatgcctgcagac 75992
Query: 987 acgttcaagggacat 1001
|| | ||||| ||||
Sbjct: 75993 acttacaaggtacat 76007
Score = 139 bits (70), Expect = 5e-29
Identities = 109/122 (89%)
Strand = Plus / Plus
Query: 1455 ggtaattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatt 1514
||||||||||||||||| || ||||||||||| || |||||||||||||||| ||||||
Sbjct: 78062 ggtaattacctcaagttttataatgctataagggaggcctatccagacattcaaatgatt 78121
Query: 1515 tcaaattgtgatggttcatctaaaccacttgaccatcctgctgatctgtatgacttccat 1574
||||||||||||| |||||| | ||||||||||||||||||||| | ||||| ||||||
Sbjct: 78122 tcaaattgtgatgcttcatcaagtccacttgaccatcctgctgatttatatgatttccat 78181
Query: 1575 gt 1576
||
Sbjct: 78182 gt 78183
Score = 127 bits (64), Expect = 2e-25
Identities = 139/164 (84%)
Strand = Plus / Plus
Query: 1809 tggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactgg 1868
||||| |||||||| || |||||||||||||||||||| || |||||||||||||| |||
Sbjct: 86438 tggaacccagatgcaattgtcttcaactcctggcaacagtatggaactcctagttattgg 86497
Query: 1869 atgcagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttcc 1928
||||| | | |||||| ||||| |||||| | ||||||||||| | || ||||| |||
Sbjct: 86498 atgcaaacatatttccgtgaatcaagtggttctgtgattcatccagtcactatcagctcc 86557
Query: 1929 agctactctggttctctagcagcatctgctatcacctggcagga 1972
||||||| || || || ||||||||||| ||||||||||||||
Sbjct: 86558 agctactttgatttactggcagcatctgcaatcacctggcagga 86601
Score = 117 bits (59), Expect = 2e-22
Identities = 104/119 (87%)
Strand = Plus / Plus
Query: 1458 aattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatttca 1517
||||||| ||||||||||||||||||| |||| | ||||| |||||||| || |||||
Sbjct: 85411 aattaccccaagttctacaatgctatacgagaggcttatcctgacattcaaataatttcg 85470
Query: 1518 aattgtgatggttcatctaaaccacttgaccatcctgctgatctgtatgacttccatgt 1576
|| |||||||| || |||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 85471 aactgtgatggctcgtctaggccacttgatcatcctgctgatctgtatgacttccatgt 85529
Score = 109 bits (55), Expect = 5e-20
Identities = 91/103 (88%)
Strand = Plus / Plus
Query: 1645 aggcctttgtcagtgagtatgcggtatggagaactgatgcaggtagaggaagccttcttg 1704
|||| ||||||||||| ||||| || ||||||| |||||||||||||||||| || ||||
Sbjct: 78665 aggcttttgtcagtgaatatgctgtttggagaagtgatgcaggtagaggaagtctacttg 78724
Query: 1705 gttcactggcagaggctgccttccttactgggctggagaagaa 1747
|||| |||||||||| || ||||||||||| |||||||||||
Sbjct: 78725 cttcattggcagaggcagctttccttactggactggagaagaa 78767
Score = 109 bits (55), Expect = 5e-20
Identities = 160/195 (82%)
Strand = Plus / Plus
Query: 531 tttgaagctggaggactccatacgccatcaaatattgacccatggtctataattggcgac 590
|||||||||||||| | ||| || || ||||||||||||||||||||||| ||||| ||
Sbjct: 106134 tttgaagctggagggccccacaccccttcaaatattgacccatggtctatcattggagat 106193
Query: 591 gactcttccatatttgtggcgactgatcgtacatcatgtttcagtcgaaacattatcgct 650
|| || || |||| || |||||||| | |||| |||||| | | ||| ||| | |||
Sbjct: 106194 gaatcctctatatacgtcacgactgattgctcatcttgtttccgccaaaatattgttgct 106253
Query: 651 cttaggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaaccct 710
|| ||||||||| ||||||||||| | || |||||| | ||||| ||||||||||||||
Sbjct: 106254 ctaaggatggagattctctgtgataattgtccagccggcggtgtcggcatttacaaccca 106313
Query: 711 gggttctggggcatg 725
|| ||||||||||||
Sbjct: 106314 ggattctggggcatg 106328
Score = 109 bits (55), Expect = 5e-20
Identities = 133/159 (83%)
Strand = Plus / Plus
Query: 1809 tggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactgg 1868
||||| |||||||| || || ||||| ||||||||||| || || ||||||||||| |||
Sbjct: 110640 tggaacccagatgcaattgtattcaattcctggcaacagtatggcactcctagttattgg 110699
Query: 1869 atgcagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttcc 1928
||||| | | |||||| ||||| |||||| | |||||||||||||||| ||| |||||
Sbjct: 110700 atgcaaacatatttccgtgaatcaagtggttctgtgattcatccaattacgatcggttcc 110759
Query: 1929 agctactctggttctctagcagcatctgctatcacctgg 1967
|||||||| | ||| || || |||||||| |||||||||
Sbjct: 110760 agctactccgattcactggctgcatctgcaatcacctgg 110798
Score = 93.7 bits (47), Expect = 3e-15
Identities = 83/95 (87%)
Strand = Plus / Plus
Query: 725 gaacatagaagatggaaagacctacaatctagttatgtatgttaaatcagcagaagctgc 784
|||||||||||||||||||| ||||||| |||| ||||||||||||||| ||||| |||
Sbjct: 75644 gaacatagaagatggaaagatctacaatttagtgatgtatgttaaatcaccagaaactgt 75703
Query: 785 agaattgacagtttcattagcaagctccgatgggt 819
|| ||||||||||| ||| |||| || |||||||
Sbjct: 75704 ggagttgacagtttccttaacaagttctgatgggt 75738
Score = 93.7 bits (47), Expect = 3e-15
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 1323 agtctagaatttgcaagggggagtgcaaactcaacatggggctctgttagagctgcaatg 1382
||||| || |||||||| |||||| | | ||||||||||||||||||||||| || |||
Sbjct: 84904 agtcttgagtttgcaagagggagtaaagaatcaacatggggctctgttagagccgcgatg 84963
Query: 1383 gggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatgaagattgtg 1437
|| || |||||||| |||||| | || ||||||||| |||| |||||||||||||
Sbjct: 84964 ggacaccctgaaccattcccactgaagtatgttgcactcgggaatgaagattgtg 85018
Score = 85.7 bits (43), Expect = 7e-13
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 2184 cagatgcaggtcacgctcgctgcccactccttctcctcgttcgaccttgcgcttgctcag 2243
|||||||| |||||||| ||| | ||||| |||||||| ||||| ||||||||||| |||
Sbjct: 79625 cagatgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgcttgcccag 79684
Query: 2244 tccgagcttgtcgcagagatgtgaagcagcgacac 2278
||| | || || |||||||||||||||||| ||||
Sbjct: 79685 tccaaactcgtggcagagatgtgaagcagcaacac 79719
Score = 83.8 bits (42), Expect = 3e-12
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 994 agggacatggttttcgcaccgaactgatatccatgcttttggatctaaaaccacgattct 1053
||||||||||||||||||| ||||| ||||| ||| | ||||| |||||||||||||||
Sbjct: 76148 agggacatggttttcgcacagaacttatatctatgatgttggacttaaaaccacgattct 76207
Query: 1054 tgagatttcctggt 1067
||||||| ||||||
Sbjct: 76208 tgagattccctggt 76221
Score = 77.8 bits (39), Expect = 2e-10
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 1458 aattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatttca 1517
|||||||||||||| || |||||||| | | ||||||| || ||||| |||||||||
Sbjct: 109339 aattacctcaagttttatgatgctatacgcaaggcctatccggatattcaaatgatttca 109398
Query: 1518 aattgtgatggttcatctaaaccacttgaccatcctgctgatctgtatgacttccatgt 1576
|| |||||||| ||||||| |||||||| |||||||||||| | || || ||||||||
Sbjct: 109399 aactgtgatggatcatctaggccacttgatcatcctgctgatttatacgatttccatgt 109457
Score = 73.8 bits (37), Expect = 3e-09
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 1680 gatgcaggtagaggaagccttcttggttcactggcagaggctgccttccttactggg 1736
||||| |||| |||||||||||||| ||||||||| |||||||| ||||||||||||
Sbjct: 110108 gatgctggtaaaggaagccttcttgcttcactggctgaggctgctttccttactggg 110164
Score = 69.9 bits (35), Expect = 4e-08
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 472 aggagatcaaccatgcaggagccggtggcatatgggcagaacttgttagtaatagaggt 530
|||| |||||||||||||| || ||||| |||||||| |||||||||||||| ||||||
Sbjct: 74790 aggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaacagaggt 74848
Score = 67.9 bits (34), Expect = 2e-07
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1748 cagtgatattgttcatatggcaagttatgcaccgctctttgtaaacgacaacgatcaaac 1807
||||||| ||||||| ||||||||||||||||| ||||| || ||| |||| ||||||||
Sbjct: 78909 cagtgatgttgttcagatggcaagttatgcaccactcttcgtgaacaacaatgatcaaac 78968
Query: 1808 gt 1809
||
Sbjct: 78969 gt 78970
Score = 61.9 bits (31), Expect = 1e-05
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 404 cctcaaggttgatgcctcatcacagcttgcccgaaagataccagacacactgtttgggat 463
||||||||||||||||||| | || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 74543 cctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 74602
Query: 464 gttttttgagg 474
||||||||||
Sbjct: 74603 attttttgagg 74613
Score = 61.9 bits (31), Expect = 1e-05
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 954 tggtttgatcaagtatcactcatgccttcagacac 988
|||||||||||||| ||||||||||||||||||||
Sbjct: 106996 tggtttgatcaagtgtcactcatgccttcagacac 107030
Score = 61.9 bits (31), Expect = 1e-05
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 1748 cagtgatattgttcatatggcaagttatgcaccgctctttgtaaacgacaa 1798
||||||| ||||||| |||||||| |||||||||||||| ||||| |||||
Sbjct: 110488 cagtgatcttgttcagatggcaagctatgcaccgctcttcgtaaatgacaa 110538
Score = 58.0 bits (29), Expect = 2e-04
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1210 agctttctgaagacctgggggctgctccaatctgggtattcaacaatgg 1258
|||||||||| || ||||| ||||| ||||||||||| |||||||||||
Sbjct: 76579 agctttctgaggatctgggtgctgccccaatctgggtgttcaacaatgg 76627
Score = 58.0 bits (29), Expect = 2e-04
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1257 ggaatcagccacaatgatgaagttagtaccgctgccattgccccttttgtaaa 1309
||||||||||| |||||||||||| ||| ||||| ||||| |||||||||||
Sbjct: 76704 ggaatcagccataatgatgaagttgatactgctgcgattgctccttttgtaaa 76756
Score = 48.1 bits (24), Expect = 0.15
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 654 aggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaaccctggg 713
||||| |||||| ||||||| || || ||||| |||||||||| || ||||| || ||
Sbjct: 82951 aggatagaggttgtctgtgacgattgtccagctggtggtgttggaatatacaatccagga 83010
Query: 714 ttctggggcatg 725
||||||||||||
Sbjct: 83011 ttctggggcatg 83022
Score = 46.1 bits (23), Expect = 0.61
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 1210 agctttctgaagacctgggggctgctccaatctgggtattcaa 1252
||||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 108361 agctttctgaagacctgggtgctgcccctatttgggtgttcaa 108403
Score = 44.1 bits (22), Expect = 2.4
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 2088 actgttctcacgtccagcaatgtaaaggatgaaaattctttcagtaaccc 2137
||||||||||| ||||| ||||| | |||||| || ||||| ||||||||
Sbjct: 79417 actgttctcacatccagtaatgtgatggatgagaactcttttagtaaccc 79466
Score = 44.1 bits (22), Expect = 2.4
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 952 tatggtttgatcaagtatcactcatgccttcaga 985
||||| ||||||| || |||||||||||||||||
Sbjct: 83730 tatggcttgatcaggtgtcactcatgccttcaga 83763
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
Length = 28386948
Score = 204 bits (103), Expect = 1e-48
Identities = 175/199 (87%)
Strand = Plus / Plus
Query: 527 aggttttgaagctggaggactccatacgccatcaaatattgacccatggtctataattgg 586
|||||||||||||||||| | ||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 1456413 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1456472
Query: 587 cgacgactcttccatatttgtggcgactgatcgtacatcatgtttcagtcgaaacattat 646
|| ||||||||||||||||||||||||||||| || |||||||| ||||| || | | |
Sbjct: 1456473 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 1456532
Query: 647 cgctcttaggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaa 706
||||| ||||||||||||||||||||| | |||||||| |||||||||||||||| ||
Sbjct: 1456533 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 1456592
Query: 707 ccctgggttctggggcatg 725
||| |||||||||||||||
Sbjct: 1456593 cccagggttctggggcatg 1456611
Score = 198 bits (100), Expect = 7e-47
Identities = 130/140 (92%)
Strand = Plus / Plus
Query: 1068 ggttgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggt 1127
|||||||| || || || ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1457529 ggttgctttgtggagggggaatggttaaggaacgcattcaggtggagggaatctattggt 1457588
Query: 1128 ccatgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggc 1187
|||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 1457589 ccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgatggc 1457648
Query: 1188 cttggatattatgagtttct 1207
|||||||||||||| |||||
Sbjct: 1457649 cttggatattatgaatttct 1457668
Score = 170 bits (86), Expect = 2e-38
Identities = 125/138 (90%)
Strand = Plus / Plus
Query: 1309 aggatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctg 1368
|||| |||||||| |||||||||||||||||||||| |||| | ||||||||||| ||||
Sbjct: 1458505 aggacgtattggacagtctagaatttgcaagggggaatgcagattcaacatggggttctg 1458564
Query: 1369 ttagagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatg 1428
||||||||||||||||||| || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 1458565 ttagagctgcaatggggcaccccgaaccattccctgtcaaatacgtcgcaattggaaatg 1458624
Query: 1429 aagattgtgggaaaaaat 1446
||||||||||||||||||
Sbjct: 1458625 aagattgtgggaaaaaat 1458642
Score = 168 bits (85), Expect = 6e-38
Identities = 166/193 (86%)
Strand = Plus / Plus
Query: 1808 gtggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactg 1867
|||||| ||||| || || || || ||||||||||||||||| |||||||||||||||||
Sbjct: 1460260 gtggaacccagacgccattgtatttaactcctggcaacaatatggaactcctagttactg 1460319
Query: 1868 gatgcagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttc 1927
|||||||| ||||| | |||||||| ||||| ||| |||||||| ||||||||| |||
Sbjct: 1460320 gatgcagactcttttcggtgaatctagcggtgctatgtttcatccagttacaatcacttc 1460379
Query: 1928 cagctactctggttctctagcagcatctgctatcacctggcaggattccgggaataactt 1987
|||||||||||||||||| ||||||||||| || || ||||||||||| | |||| |||
Sbjct: 1460380 cagctactctggttctctggcagcatctgcaattacttggcaggattctgaaaatagctt 1460439
Query: 1988 cctgagagtaaag 2000
| | |||||||||
Sbjct: 1460440 cttaagagtaaag 1460452
Score = 153 bits (77), Expect = 4e-33
Identities = 122/137 (89%)
Strand = Plus / Plus
Query: 1071 tgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggtcca 1130
||||| ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 1489331 tgctttgttgaaggcgattggttaagaaatgctttcaggtggagggaaactattggtccc 1489390
Query: 1131 tgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggcctt 1190
|||||| |||| ||||| ||||| |||||||||||| |||| ||||| || ||||||||
Sbjct: 1489391 tgggaacagagacctgggcactttggagatgtttggaattattggaccgatgatggccta 1489450
Query: 1191 ggatattatgagtttct 1207
|||||||| ||||||||
Sbjct: 1489451 ggatattacgagtttct 1489467
Score = 153 bits (77), Expect = 4e-33
Identities = 116/129 (89%)
Strand = Plus / Plus
Query: 1309 aggatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctg 1368
||||||||||||||||||| ||||||||||||||||| ||| | || |||||||| ||||
Sbjct: 1489920 aggatgtattggatagtcttgaatttgcaagggggagagcagaatcgacatggggttctg 1489979
Query: 1369 ttagagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatg 1428
|||||||||||||||||||||| |||| ||||||| | || |||||||| || |||||||
Sbjct: 1489980 ttagagctgcaatggggcatccagaacggttcccactgaagtatgttgctattggaaatg 1490039
Query: 1429 aagattgtg 1437
|||||||||
Sbjct: 1490040 aagattgtg 1490048
Score = 151 bits (76), Expect = 1e-32
Identities = 124/140 (88%)
Strand = Plus / Plus
Query: 1068 ggttgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggt 1127
|||||||| ||||||||| | ||||||| |||||| |||||||||| |||| ||||||||
Sbjct: 1465501 ggttgctttgttgaaggcaattggttaaaaaatgcgttcaggtggaaggaaactattggt 1465560
Query: 1128 ccatgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggc 1187
|||||||||||||| ||||| |||| |||||||||||||| |||||||| || ||||||
Sbjct: 1465561 ccatgggaagagagacctgggcactatggagatgtttggcactactggaccgatgatggc 1465620
Query: 1188 cttggatattatgagtttct 1207
||||| |||||||| |||||
Sbjct: 1465621 cttgggtattatgactttct 1465640
Score = 149 bits (75), Expect = 6e-32
Identities = 120/135 (88%)
Strand = Plus / Plus
Query: 867 tggacaaaagtggagcaaaaattgattgctaaagggacaaacagaacctcaagacttcag 926
||||||||| ||||||| || ||| ||||| |||| ||||| ||||||||||| |||||
Sbjct: 1457078 tggacaaaactggagcagaagttggttgctcaaggaacaaatagaacctcaaggcttcaa 1457137
Query: 927 ataacatctaacaagaagggagttgtatggtttgatcaagtatcactcatgccttcagac 986
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 1457138 ataacaactaacaagaagggagttgtatggtttgatcaagtatcgctcatgcctgcagac 1457197
Query: 987 acgttcaagggacat 1001
|| | ||||| ||||
Sbjct: 1457198 acttacaaggtacat 1457212
Score = 139 bits (70), Expect = 5e-29
Identities = 109/122 (89%)
Strand = Plus / Plus
Query: 1455 ggtaattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatt 1514
||||||||||||||||| || ||||||||||| || |||||||||||||||| ||||||
Sbjct: 1459267 ggtaattacctcaagttttataatgctataagggaggcctatccagacattcaaatgatt 1459326
Query: 1515 tcaaattgtgatggttcatctaaaccacttgaccatcctgctgatctgtatgacttccat 1574
||||||||||||| |||||| | ||||||||||||||||||||| | ||||| ||||||
Sbjct: 1459327 tcaaattgtgatgcttcatcaagtccacttgaccatcctgctgatttatatgatttccat 1459386
Query: 1575 gt 1576
||
Sbjct: 1459387 gt 1459388
Score = 127 bits (64), Expect = 2e-25
Identities = 139/164 (84%)
Strand = Plus / Plus
Query: 1809 tggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactgg 1868
||||| |||||||| || |||||||||||||||||||| || |||||||||||||| |||
Sbjct: 1467643 tggaacccagatgcaattgtcttcaactcctggcaacagtatggaactcctagttattgg 1467702
Query: 1869 atgcagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttcc 1928
||||| | | |||||| ||||| |||||| | ||||||||||| | || ||||| |||
Sbjct: 1467703 atgcaaacatatttccgtgaatcaagtggttctgtgattcatccagtcactatcagctcc 1467762
Query: 1929 agctactctggttctctagcagcatctgctatcacctggcagga 1972
||||||| || || || ||||||||||| ||||||||||||||
Sbjct: 1467763 agctactttgatttactggcagcatctgcaatcacctggcagga 1467806
Score = 117 bits (59), Expect = 2e-22
Identities = 104/119 (87%)
Strand = Plus / Plus
Query: 1458 aattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatttca 1517
||||||| ||||||||||||||||||| |||| | ||||| |||||||| || |||||
Sbjct: 1466616 aattaccccaagttctacaatgctatacgagaggcttatcctgacattcaaataatttcg 1466675
Query: 1518 aattgtgatggttcatctaaaccacttgaccatcctgctgatctgtatgacttccatgt 1576
|| |||||||| || |||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 1466676 aactgtgatggctcgtctaggccacttgatcatcctgctgatctgtatgacttccatgt 1466734
Score = 109 bits (55), Expect = 5e-20
Identities = 91/103 (88%)
Strand = Plus / Plus
Query: 1645 aggcctttgtcagtgagtatgcggtatggagaactgatgcaggtagaggaagccttcttg 1704
|||| ||||||||||| ||||| || ||||||| |||||||||||||||||| || ||||
Sbjct: 1459870 aggcttttgtcagtgaatatgctgtttggagaagtgatgcaggtagaggaagtctacttg 1459929
Query: 1705 gttcactggcagaggctgccttccttactgggctggagaagaa 1747
|||| |||||||||| || ||||||||||| |||||||||||
Sbjct: 1459930 cttcattggcagaggcagctttccttactggactggagaagaa 1459972
Score = 109 bits (55), Expect = 5e-20
Identities = 160/195 (82%)
Strand = Plus / Plus
Query: 531 tttgaagctggaggactccatacgccatcaaatattgacccatggtctataattggcgac 590
|||||||||||||| | ||| || || ||||||||||||||||||||||| ||||| ||
Sbjct: 1487339 tttgaagctggagggccccacaccccttcaaatattgacccatggtctatcattggagat 1487398
Query: 591 gactcttccatatttgtggcgactgatcgtacatcatgtttcagtcgaaacattatcgct 650
|| || || |||| || |||||||| | |||| |||||| | | ||| ||| | |||
Sbjct: 1487399 gaatcctctatatacgtcacgactgattgctcatcttgtttccgccaaaatattgttgct 1487458
Query: 651 cttaggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaaccct 710
|| ||||||||| ||||||||||| | || |||||| | ||||| ||||||||||||||
Sbjct: 1487459 ctaaggatggagattctctgtgataattgtccagccggcggtgtcggcatttacaaccca 1487518
Query: 711 gggttctggggcatg 725
|| ||||||||||||
Sbjct: 1487519 ggattctggggcatg 1487533
Score = 109 bits (55), Expect = 5e-20
Identities = 133/159 (83%)
Strand = Plus / Plus
Query: 1809 tggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactgg 1868
||||| |||||||| || || ||||| ||||||||||| || || ||||||||||| |||
Sbjct: 1491845 tggaacccagatgcaattgtattcaattcctggcaacagtatggcactcctagttattgg 1491904
Query: 1869 atgcagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttcc 1928
||||| | | |||||| ||||| |||||| | |||||||||||||||| ||| |||||
Sbjct: 1491905 atgcaaacatatttccgtgaatcaagtggttctgtgattcatccaattacgatcggttcc 1491964
Query: 1929 agctactctggttctctagcagcatctgctatcacctgg 1967
|||||||| | ||| || || |||||||| |||||||||
Sbjct: 1491965 agctactccgattcactggctgcatctgcaatcacctgg 1492003
Score = 93.7 bits (47), Expect = 3e-15
Identities = 83/95 (87%)
Strand = Plus / Plus
Query: 725 gaacatagaagatggaaagacctacaatctagttatgtatgttaaatcagcagaagctgc 784
|||||||||||||||||||| ||||||| |||| ||||||||||||||| ||||| |||
Sbjct: 1456849 gaacatagaagatggaaagatctacaatttagtgatgtatgttaaatcaccagaaactgt 1456908
Query: 785 agaattgacagtttcattagcaagctccgatgggt 819
|| ||||||||||| ||| |||| || |||||||
Sbjct: 1456909 ggagttgacagtttccttaacaagttctgatgggt 1456943
Score = 93.7 bits (47), Expect = 3e-15
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 1323 agtctagaatttgcaagggggagtgcaaactcaacatggggctctgttagagctgcaatg 1382
||||| || |||||||| |||||| | | ||||||||||||||||||||||| || |||
Sbjct: 1466109 agtcttgagtttgcaagagggagtaaagaatcaacatggggctctgttagagccgcgatg 1466168
Query: 1383 gggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatgaagattgtg 1437
|| || |||||||| |||||| | || ||||||||| |||| |||||||||||||
Sbjct: 1466169 ggacaccctgaaccattcccactgaagtatgttgcactcgggaatgaagattgtg 1466223
Score = 85.7 bits (43), Expect = 7e-13
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 2184 cagatgcaggtcacgctcgctgcccactccttctcctcgttcgaccttgcgcttgctcag 2243
|||||||| |||||||| ||| | ||||| |||||||| ||||| ||||||||||| |||
Sbjct: 1460830 cagatgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgcttgcccag 1460889
Query: 2244 tccgagcttgtcgcagagatgtgaagcagcgacac 2278
||| | || || |||||||||||||||||| ||||
Sbjct: 1460890 tccaaactcgtggcagagatgtgaagcagcaacac 1460924
Score = 83.8 bits (42), Expect = 3e-12
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 994 agggacatggttttcgcaccgaactgatatccatgcttttggatctaaaaccacgattct 1053
||||||||||||||||||| ||||| ||||| ||| | ||||| |||||||||||||||
Sbjct: 1457353 agggacatggttttcgcacagaacttatatctatgatgttggacttaaaaccacgattct 1457412
Query: 1054 tgagatttcctggt 1067
||||||| ||||||
Sbjct: 1457413 tgagattccctggt 1457426
Score = 77.8 bits (39), Expect = 2e-10
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 1458 aattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatttca 1517
|||||||||||||| || |||||||| | | ||||||| || ||||| |||||||||
Sbjct: 1490544 aattacctcaagttttatgatgctatacgcaaggcctatccggatattcaaatgatttca 1490603
Query: 1518 aattgtgatggttcatctaaaccacttgaccatcctgctgatctgtatgacttccatgt 1576
|| |||||||| ||||||| |||||||| |||||||||||| | || || ||||||||
Sbjct: 1490604 aactgtgatggatcatctaggccacttgatcatcctgctgatttatacgatttccatgt 1490662
Score = 73.8 bits (37), Expect = 3e-09
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 1680 gatgcaggtagaggaagccttcttggttcactggcagaggctgccttccttactggg 1736
||||| |||| |||||||||||||| ||||||||| |||||||| ||||||||||||
Sbjct: 1491313 gatgctggtaaaggaagccttcttgcttcactggctgaggctgctttccttactggg 1491369
Score = 69.9 bits (35), Expect = 4e-08
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 472 aggagatcaaccatgcaggagccggtggcatatgggcagaacttgttagtaatagaggt 530
|||| |||||||||||||| || ||||| |||||||| |||||||||||||| ||||||
Sbjct: 1455995 aggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaacagaggt 1456053
Score = 67.9 bits (34), Expect = 2e-07
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1748 cagtgatattgttcatatggcaagttatgcaccgctctttgtaaacgacaacgatcaaac 1807
||||||| ||||||| ||||||||||||||||| ||||| || ||| |||| ||||||||
Sbjct: 1460114 cagtgatgttgttcagatggcaagttatgcaccactcttcgtgaacaacaatgatcaaac 1460173
Query: 1808 gt 1809
||
Sbjct: 1460174 gt 1460175
Score = 61.9 bits (31), Expect = 1e-05
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 404 cctcaaggttgatgcctcatcacagcttgcccgaaagataccagacacactgtttgggat 463
||||||||||||||||||| | || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 1455748 cctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 1455807
Query: 464 gttttttgagg 474
||||||||||
Sbjct: 1455808 attttttgagg 1455818
Score = 61.9 bits (31), Expect = 1e-05
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 954 tggtttgatcaagtatcactcatgccttcagacac 988
|||||||||||||| ||||||||||||||||||||
Sbjct: 1488201 tggtttgatcaagtgtcactcatgccttcagacac 1488235
Score = 61.9 bits (31), Expect = 1e-05
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 1748 cagtgatattgttcatatggcaagttatgcaccgctctttgtaaacgacaa 1798
||||||| ||||||| |||||||| |||||||||||||| ||||| |||||
Sbjct: 1491693 cagtgatcttgttcagatggcaagctatgcaccgctcttcgtaaatgacaa 1491743
Score = 58.0 bits (29), Expect = 2e-04
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1210 agctttctgaagacctgggggctgctccaatctgggtattcaacaatgg 1258
|||||||||| || ||||| ||||| ||||||||||| |||||||||||
Sbjct: 1457784 agctttctgaggatctgggtgctgccccaatctgggtgttcaacaatgg 1457832
Score = 58.0 bits (29), Expect = 2e-04
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1257 ggaatcagccacaatgatgaagttagtaccgctgccattgccccttttgtaaa 1309
||||||||||| |||||||||||| ||| ||||| ||||| |||||||||||
Sbjct: 1457909 ggaatcagccataatgatgaagttgatactgctgcgattgctccttttgtaaa 1457961
Score = 48.1 bits (24), Expect = 0.15
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 654 aggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaaccctggg 713
||||| |||||| ||||||| || || ||||| |||||||||| || ||||| || ||
Sbjct: 1464156 aggatagaggttgtctgtgacgattgtccagctggtggtgttggaatatacaatccagga 1464215
Query: 714 ttctggggcatg 725
||||||||||||
Sbjct: 1464216 ttctggggcatg 1464227
Score = 46.1 bits (23), Expect = 0.61
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 1210 agctttctgaagacctgggggctgctccaatctgggtattcaa 1252
||||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 1489566 agctttctgaagacctgggtgctgcccctatttgggtgttcaa 1489608
Score = 44.1 bits (22), Expect = 2.4
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 2088 actgttctcacgtccagcaatgtaaaggatgaaaattctttcagtaaccc 2137
||||||||||| ||||| ||||| | |||||| || ||||| ||||||||
Sbjct: 1460622 actgttctcacatccagtaatgtgatggatgagaactcttttagtaaccc 1460671
Score = 44.1 bits (22), Expect = 2.4
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 952 tatggtttgatcaagtatcactcatgccttcaga 985
||||| ||||||| || |||||||||||||||||
Sbjct: 1464935 tatggcttgatcaggtgtcactcatgccttcaga 1464968
>emb|CR855231.1 | Oryza sativa genomic DNA, chromosome 4, BAC clone:
OSIGBa0138E08-OSIGBa0161L23, complete sequence
Length = 149416
Score = 153 bits (77), Expect = 4e-33
Identities = 125/141 (88%)
Strand = Plus / Minus
Query: 1071 tgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggtcca 1130
||||| ||||||||| | |||||||||||||||||||||||| | || ||| |||||||
Sbjct: 106029 tgctttgttgaaggccagtggttaagaaatgcattcaggtggcgtgagtctgttggtccg 105970
Query: 1131 tgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggcctt 1190
||||| ||||||||||||||||| || ||||| ||| ||| |||||||| |||||||||
Sbjct: 105969 tgggaggagaggcctggacactttggtgatgtctggggttattggactgatgatggcctt 105910
Query: 1191 ggatattatgagtttcttcag 1211
|||||||||||||||||||||
Sbjct: 105909 ggatattatgagtttcttcag 105889
Score = 135 bits (68), Expect = 9e-28
Identities = 110/124 (88%)
Strand = Plus / Minus
Query: 1309 aggatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctg 1368
||||| || |||| || ||||||||||||||||| ||| | ||||||||||||||||||
Sbjct: 105148 aggatatactggacagcctagaatttgcaaggggaagtaccaactcaacatggggctctc 105089
Query: 1369 ttagagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatg 1428
|||||| ||||||||||||||||||||| || ||||||||||||||| |||| ||||| |
Sbjct: 105088 ttagagttgcaatggggcatcctgaaccatttccagtcaaatatgttacaattggaaacg 105029
Query: 1429 aaga 1432
||||
Sbjct: 105028 aaga 105025
Score = 133 bits (67), Expect = 3e-27
Identities = 124/143 (86%)
Strand = Plus / Minus
Query: 848 agttgctggcacttccaactggacaaaagtggagcaaaaattgattgctaaagggacaaa 907
||||||||| || || || ||||||||| | ||||| || ||| |||||||||| |||||
Sbjct: 106584 agttgctggtacatcaaattggacaaaacttgagcagaagttggttgctaaaggaacaaa 106525
Query: 908 cagaacctcaagacttcagataacatctaacaagaagggagttgtatggtttgatcaagt 967
|||||||||||| ||||| |||||| |||||||||| || || ||||||| |||||| |
Sbjct: 106524 cagaacctcaaggcttcaaataacaactaacaagaaaggtgtcatatggttggatcaaat 106465
Query: 968 atcactcatgccttcagacacgt 990
|||||||||||||||||||||||
Sbjct: 106464 atcactcatgccttcagacacgt 106442
Score = 133 bits (67), Expect = 3e-27
Identities = 166/199 (83%)
Strand = Plus / Minus
Query: 527 aggttttgaagctggaggactccatacgccatcaaatattgacccatggtctataattgg 586
|||||| ||||||||||| | |||| ||||| | |||||||| ||||| ||||||||
Sbjct: 107203 aggtttcgaagctggaggccctaatactccatcgagcattgacccttggtccataattgg 107144
Query: 587 cgacgactcttccatatttgtggcgactgatcgtacatcatgtttcagtcgaaacattat 646
| || ||| ||||| ||||| |||||||| ||||||||||||||||||| || ||
Sbjct: 107143 aaatgaatctgtcatatcagtggcaactgatcgatcatcatgtttcagtcgaaatatcat 107084
Query: 647 cgctcttaggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaa 706
||||| ||||||||||||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 107083 tgctctgaggatggaggttctctgtggtgactgccaagctggtggtgttggcatttacaa 107024
Query: 707 ccctgggttctggggcatg 725
|| || ||||||||||||
Sbjct: 107023 tccaggattctggggcatg 107005
Score = 123 bits (62), Expect = 3e-24
Identities = 107/122 (87%)
Strand = Plus / Minus
Query: 1455 ggtaattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatt 1514
|||||||||||||||||| | |||||||||||| | |||||||| ||||| || ||
Sbjct: 104551 ggtaattacctcaagttccatcgtgctataagagaggcttatccagatattcaaatcatc 104492
Query: 1515 tcaaattgtgatggttcatctaaaccacttgaccatcctgctgatctgtatgacttccat 1574
||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 104491 tcaaactgtgatggttcatctaaaccacttgaccatcctgctgacatatatgacttccat 104432
Query: 1575 gt 1576
||
Sbjct: 104431 gt 104430
Score = 89.7 bits (45), Expect = 5e-14
Identities = 81/93 (87%)
Strand = Plus / Minus
Query: 1808 gtggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactg 1867
|||||| |||| |||| ||||||||||||| ||| |||| || |||| ||||||||||||
Sbjct: 103361 gtggaacccagctgctgtcgtcttcaactcatggaaacagtatggaagtcctagttactg 103302
Query: 1868 gatgcagaagtttttccgcgaatctagtggtgc 1900
|||||||| ||||||||||||| ||||||||
Sbjct: 103301 gatgcagacaattttccgcgaatcgagtggtgc 103269
Score = 77.8 bits (39), Expect = 2e-10
Identities = 87/103 (84%)
Strand = Plus / Minus
Query: 1645 aggcctttgtcagtgagtatgcggtatggagaactgatgcaggtagaggaagccttcttg 1704
|||||||||||||||||||||| || | || | || || ||||||||||| |||||||
Sbjct: 103767 aggcctttgtcagtgagtatgctgtttcaagtaatggtgtaggtagaggaactcttcttg 103708
Query: 1705 gttcactggcagaggctgccttccttactgggctggagaagaa 1747
|||||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 103707 cctcactggctgaggctgctttcctcactggactggagaagaa 103665
Score = 73.8 bits (37), Expect = 3e-09
Identities = 88/105 (83%)
Strand = Plus / Minus
Query: 725 gaacatagaagatggaaagacctacaatctagttatgtatgttaaatcagcagaagctgc 784
||||||||| |||||||||| ||||| ||| || ||||||| ||||||| |||| | |
Sbjct: 106789 gaacatagaggatggaaagaactacagtcttgtcatgtatgctaaatcattagaaaatac 106730
Query: 785 agaattgacagtttcattagcaagctccgatgggttgcagaatct 829
||| || ||||||||| || ||||||| ||||||||||| |||||
Sbjct: 106729 agagttaacagtttcactaacaagctctgatgggttgcaaaatct 106685
Score = 61.9 bits (31), Expect = 1e-05
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 472 aggagatcaaccatgcaggagccggtggcatatgggcagaacttgttagtaatagaggt 530
|||||||||||||||| ||||| ||||| ||||||||||| ||||| || || ||||||
Sbjct: 107708 aggagatcaaccatgctggagcaggtggaatatgggcagagcttgtcagcaacagaggt 107650
Score = 58.0 bits (29), Expect = 2e-04
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1210 agctttctgaagacctgggggctgctccaatctgggtattcaacaatgg 1258
|||||||||| || ||||| ||||| ||||||||||| |||||||||||
Sbjct: 105811 agctttctgaggatctgggtgctgccccaatctgggtgttcaacaatgg 105763
Score = 54.0 bits (27), Expect = 0.003
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1021 tatccatgcttttggatctaaaaccacgattcttgagatttcctggt 1067
|||| |||||||||||| ||||||||| |||| |||| |||||||||
Sbjct: 106164 tatcaatgcttttggatttaaaaccacaattcatgaggtttcctggt 106118
Score = 54.0 bits (27), Expect = 0.003
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 404 cctcaaggttgatgcctcatcacagcttgcccgaaagataccagacacactgtttgggat 463
||||||||||||||||||| | |||| ||| |||||||| || || || || ||||||||
Sbjct: 107893 cctcaaggttgatgcctcaccgcagcatgctcgaaagatccctgagacgctctttgggat 107834
Query: 464 gttttttgagg 474
||||| ||||
Sbjct: 107833 atttttcgagg 107823
Score = 46.1 bits (23), Expect = 0.61
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1748 cagtgatattgttcatatggcaagttatgcaccgctctt 1786
||||||| ||||||| ||||| || ||||||||||||||
Sbjct: 103504 cagtgatgttgttcagatggccagctatgcaccgctctt 103466
>gb|AC138454.2 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0019B24, complete sequence
Length = 162385
Score = 153 bits (77), Expect = 4e-33
Identities = 122/137 (89%)
Strand = Plus / Plus
Query: 1071 tgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggtcca 1130
||||| ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 3867 tgctttgttgaaggcgattggttaagaaatgctttcaggtggagggaaactattggtccc 3926
Query: 1131 tgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggcctt 1190
|||||| |||| ||||| ||||| |||||||||||| |||| ||||| || ||||||||
Sbjct: 3927 tgggaacagagacctgggcactttggagatgtttggaattattggaccgatgatggccta 3986
Query: 1191 ggatattatgagtttct 1207
|||||||| ||||||||
Sbjct: 3987 ggatattacgagtttct 4003
Score = 153 bits (77), Expect = 4e-33
Identities = 116/129 (89%)
Strand = Plus / Plus
Query: 1309 aggatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctg 1368
||||||||||||||||||| ||||||||||||||||| ||| | || |||||||| ||||
Sbjct: 4456 aggatgtattggatagtcttgaatttgcaagggggagagcagaatcgacatggggttctg 4515
Query: 1369 ttagagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatg 1428
|||||||||||||||||||||| |||| ||||||| | || |||||||| || |||||||
Sbjct: 4516 ttagagctgcaatggggcatccagaacggttcccactgaagtatgttgctattggaaatg 4575
Query: 1429 aagattgtg 1437
|||||||||
Sbjct: 4576 aagattgtg 4584
Score = 109 bits (55), Expect = 5e-20
Identities = 160/195 (82%)
Strand = Plus / Plus
Query: 531 tttgaagctggaggactccatacgccatcaaatattgacccatggtctataattggcgac 590
|||||||||||||| | ||| || || ||||||||||||||||||||||| ||||| ||
Sbjct: 1875 tttgaagctggagggccccacaccccttcaaatattgacccatggtctatcattggagat 1934
Query: 591 gactcttccatatttgtggcgactgatcgtacatcatgtttcagtcgaaacattatcgct 650
|| || || |||| || |||||||| | |||| |||||| | | ||| ||| | |||
Sbjct: 1935 gaatcctctatatacgtcacgactgattgctcatcttgtttccgccaaaatattgttgct 1994
Query: 651 cttaggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaaccct 710
|| ||||||||| ||||||||||| | || |||||| | ||||| ||||||||||||||
Sbjct: 1995 ctaaggatggagattctctgtgataattgtccagccggcggtgtcggcatttacaaccca 2054
Query: 711 gggttctggggcatg 725
|| ||||||||||||
Sbjct: 2055 ggattctggggcatg 2069
Score = 109 bits (55), Expect = 5e-20
Identities = 133/159 (83%)
Strand = Plus / Plus
Query: 1809 tggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactgg 1868
||||| |||||||| || || ||||| ||||||||||| || || ||||||||||| |||
Sbjct: 6381 tggaacccagatgcaattgtattcaattcctggcaacagtatggcactcctagttattgg 6440
Query: 1869 atgcagaagtttttccgcgaatctagtggtgccatgattcatccaattacaatcagttcc 1928
||||| | | |||||| ||||| |||||| | |||||||||||||||| ||| |||||
Sbjct: 6441 atgcaaacatatttccgtgaatcaagtggttctgtgattcatccaattacgatcggttcc 6500
Query: 1929 agctactctggttctctagcagcatctgctatcacctgg 1967
|||||||| | ||| || || |||||||| |||||||||
Sbjct: 6501 agctactccgattcactggctgcatctgcaatcacctgg 6539
Score = 77.8 bits (39), Expect = 2e-10
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 1458 aattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatttca 1517
|||||||||||||| || |||||||| | | ||||||| || ||||| |||||||||
Sbjct: 5080 aattacctcaagttttatgatgctatacgcaaggcctatccggatattcaaatgatttca 5139
Query: 1518 aattgtgatggttcatctaaaccacttgaccatcctgctgatctgtatgacttccatgt 1576
|| |||||||| ||||||| |||||||| |||||||||||| | || || ||||||||
Sbjct: 5140 aactgtgatggatcatctaggccacttgatcatcctgctgatttatacgatttccatgt 5198
Score = 73.8 bits (37), Expect = 3e-09
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 1680 gatgcaggtagaggaagccttcttggttcactggcagaggctgccttccttactggg 1736
||||| |||| |||||||||||||| ||||||||| |||||||| ||||||||||||
Sbjct: 5849 gatgctggtaaaggaagccttcttgcttcactggctgaggctgctttccttactggg 5905
Score = 61.9 bits (31), Expect = 1e-05
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 954 tggtttgatcaagtatcactcatgccttcagacac 988
|||||||||||||| ||||||||||||||||||||
Sbjct: 2737 tggtttgatcaagtgtcactcatgccttcagacac 2771
Score = 61.9 bits (31), Expect = 1e-05
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 1748 cagtgatattgttcatatggcaagttatgcaccgctctttgtaaacgacaa 1798
||||||| ||||||| |||||||| |||||||||||||| ||||| |||||
Sbjct: 6229 cagtgatcttgttcagatggcaagctatgcaccgctcttcgtaaatgacaa 6279
Score = 46.1 bits (23), Expect = 0.61
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 1210 agctttctgaagacctgggggctgctccaatctgggtattcaa 1252
||||||||||||||||||| ||||| || || ||||| |||||
Sbjct: 4102 agctttctgaagacctgggtgctgcccctatttgggtgttcaa 4144
>dbj|AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
Length = 35498469
Score = 153 bits (77), Expect = 4e-33
Identities = 125/141 (88%)
Strand = Plus / Minus
Query: 1071 tgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggtcca 1130
||||| ||||||||| | |||||||||||||||||||||||| | || ||| |||||||
Sbjct: 11558667 tgctttgttgaaggccagtggttaagaaatgcattcaggtggcgtgagtctgttggtccg 11558608
Query: 1131 tgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggcctt 1190
||||| ||||||||||||||||| || ||||| ||| ||| |||||||| |||||||||
Sbjct: 11558607 tgggaggagaggcctggacactttggtgatgtctggggttattggactgatgatggcctt 11558548
Query: 1191 ggatattatgagtttcttcag 1211
|||||||||||||||||||||
Sbjct: 11558547 ggatattatgagtttcttcag 11558527
Score = 135 bits (68), Expect = 9e-28
Identities = 110/124 (88%)
Strand = Plus / Minus
Query: 1309 aggatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctg 1368
||||| || |||| || ||||||||||||||||| ||| | ||||||||||||||||||
Sbjct: 11557785 aggatatactggacagcctagaatttgcaaggggaagtaccaactcaacatggggctctc 11557726
Query: 1369 ttagagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatg 1428
|||||| ||||||||||||||||||||| || ||||||||||||||| |||| ||||| |
Sbjct: 11557725 ttagagttgcaatggggcatcctgaaccatttccagtcaaatatgttacaattggaaacg 11557666
Query: 1429 aaga 1432
||||
Sbjct: 11557665 aaga 11557662
Score = 133 bits (67), Expect = 3e-27
Identities = 124/143 (86%)
Strand = Plus / Minus
Query: 848 agttgctggcacttccaactggacaaaagtggagcaaaaattgattgctaaagggacaaa 907
||||||||| || || || ||||||||| | ||||| || ||| |||||||||| |||||
Sbjct: 11559228 agttgctggtacatcaaattggacaaaacttgagcagaagttggttgctaaaggaacaaa 11559169
Query: 908 cagaacctcaagacttcagataacatctaacaagaagggagttgtatggtttgatcaagt 967
|||||||||||| ||||| |||||| |||||||||| || || ||||||| |||||| |
Sbjct: 11559168 cagaacctcaaggcttcaaataacaactaacaagaaaggtgtcatatggttggatcaaat 11559109
Query: 968 atcactcatgccttcagacacgt 990
|||||||||||||||||||||||
Sbjct: 11559108 atcactcatgccttcagacacgt 11559086
Score = 133 bits (67), Expect = 3e-27
Identities = 166/199 (83%)
Strand = Plus / Minus
Query: 527 aggttttgaagctggaggactccatacgccatcaaatattgacccatggtctataattgg 586
|||||| ||||||||||| | |||| ||||| | |||||||| ||||| ||||||||
Sbjct: 11559847 aggtttcgaagctggaggccctaatactccatcgagcattgacccttggtccataattgg 11559788
Query: 587 cgacgactcttccatatttgtggcgactgatcgtacatcatgtttcagtcgaaacattat 646
| || ||| ||||| ||||| |||||||| ||||||||||||||||||| || ||
Sbjct: 11559787 aaatgaatctgtcatatcagtggcaactgatcgatcatcatgtttcagtcgaaatatcat 11559728
Query: 647 cgctcttaggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaa 706
||||| ||||||||||||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 11559727 tgctctgaggatggaggttctctgtggtgactgccaagctggtggtgttggcatttacaa 11559668
Query: 707 ccctgggttctggggcatg 725
|| || ||||||||||||
Sbjct: 11559667 tccaggattctggggcatg 11559649
Score = 131 bits (66), Expect = 1e-26
Identities = 108/122 (88%)
Strand = Plus / Minus
Query: 1455 ggtaattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatt 1514
|||||||||||||||||| | |||||||||||| | |||||||||||||| || ||
Sbjct: 11557188 ggtaattacctcaagttccatcgtgctataagagaggcttatccagacattcaaatcatc 11557129
Query: 1515 tcaaattgtgatggttcatctaaaccacttgaccatcctgctgatctgtatgacttccat 1574
||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 11557128 tcaaactgtgatggttcatctaaaccacttgaccatcctgctgacatatatgacttccat 11557069
Query: 1575 gt 1576
||
Sbjct: 11557068 gt 11557067
Score = 89.7 bits (45), Expect = 5e-14
Identities = 81/93 (87%)
Strand = Plus / Minus
Query: 1808 gtggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactg 1867
|||||| |||| |||| ||||||||||||| ||| |||| || |||| ||||||||||||
Sbjct: 11555999 gtggaacccagctgctgtcgtcttcaactcatggaaacagtatggaagtcctagttactg 11555940
Query: 1868 gatgcagaagtttttccgcgaatctagtggtgc 1900
|||||||| ||||||||||||| ||||||||
Sbjct: 11555939 gatgcagacaattttccgcgaatcgagtggtgc 11555907
Score = 77.8 bits (39), Expect = 2e-10
Identities = 87/103 (84%)
Strand = Plus / Minus
Query: 1645 aggcctttgtcagtgagtatgcggtatggagaactgatgcaggtagaggaagccttcttg 1704
|||||||||||||||||||||| || | || | || || ||||||||||| |||||||
Sbjct: 11556405 aggcctttgtcagtgagtatgctgtttcaagtaatggtgtaggtagaggaactcttcttg 11556346
Query: 1705 gttcactggcagaggctgccttccttactgggctggagaagaa 1747
|||||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 11556345 cctcactggctgaggctgctttcctcactggactggagaagaa 11556303
Score = 73.8 bits (37), Expect = 3e-09
Identities = 88/105 (83%)
Strand = Plus / Minus
Query: 725 gaacatagaagatggaaagacctacaatctagttatgtatgttaaatcagcagaagctgc 784
||||||||| |||||||||| ||||| ||| || ||||||| ||||||| |||| | |
Sbjct: 11559433 gaacatagaggatggaaagaactacagtcttgtcatgtatgctaaatcattagaaaatac 11559374
Query: 785 agaattgacagtttcattagcaagctccgatgggttgcagaatct 829
||| || ||||||||| || ||||||| ||||||||||| |||||
Sbjct: 11559373 agagttaacagtttcactaacaagctctgatgggttgcaaaatct 11559329
Score = 61.9 bits (31), Expect = 1e-05
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 472 aggagatcaaccatgcaggagccggtggcatatgggcagaacttgttagtaatagaggt 530
|||||||||||||||| ||||| ||||| ||||||||||| ||||| || || ||||||
Sbjct: 11560352 aggagatcaaccatgctggagcaggtggaatatgggcagagcttgtcagcaacagaggt 11560294
Score = 61.9 bits (31), Expect = 1e-05
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 404 cctcaaggttgatgcctcatcacagcttgcccgaaagataccagacacactgtttgggat 463
||||||||||||||||||| | |||| ||| |||||||| || || ||||| ||||||||
Sbjct: 11560537 cctcaaggttgatgcctcaccgcagcatgctcgaaagatccctgagacactctttgggat 11560478
Query: 464 gttttttgagg 474
||||| ||||
Sbjct: 11560477 atttttcgagg 11560467
Score = 58.0 bits (29), Expect = 2e-04
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1210 agctttctgaagacctgggggctgctccaatctgggtattcaacaatgg 1258
|||||||||| || ||||| ||||| ||||||||||| |||||||||||
Sbjct: 11558449 agctttctgaggatctgggtgctgccccaatctgggtgttcaacaatgg 11558401
Score = 54.0 bits (27), Expect = 0.003
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1021 tatccatgcttttggatctaaaaccacgattcttgagatttcctggt 1067
|||| |||||||||||| ||||||||| |||| |||| |||||||||
Sbjct: 11558802 tatcaatgcttttggatttaaaaccacaattcatgaggtttcctggt 11558756
Score = 46.1 bits (23), Expect = 0.61
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1748 cagtgatattgttcatatggcaagttatgcaccgctctt 1786
||||||| ||||||| ||||| || ||||||||||||||
Sbjct: 11556142 cagtgatgttgttcagatggccagctatgcaccgctctt 11556104
>emb|AL663008.3 |OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09,
complete sequence
Length = 164911
Score = 153 bits (77), Expect = 4e-33
Identities = 125/141 (88%)
Strand = Plus / Minus
Query: 1071 tgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggtcca 1130
||||| ||||||||| | |||||||||||||||||||||||| | || ||| |||||||
Sbjct: 41677 tgctttgttgaaggccagtggttaagaaatgcattcaggtggcgtgagtctgttggtccg 41618
Query: 1131 tgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggcctt 1190
||||| ||||||||||||||||| || ||||| ||| ||| |||||||| |||||||||
Sbjct: 41617 tgggaggagaggcctggacactttggtgatgtctggggttattggactgatgatggcctt 41558
Query: 1191 ggatattatgagtttcttcag 1211
|||||||||||||||||||||
Sbjct: 41557 ggatattatgagtttcttcag 41537
Score = 135 bits (68), Expect = 9e-28
Identities = 110/124 (88%)
Strand = Plus / Minus
Query: 1309 aggatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctg 1368
||||| || |||| || ||||||||||||||||| ||| | ||||||||||||||||||
Sbjct: 40795 aggatatactggacagcctagaatttgcaaggggaagtaccaactcaacatggggctctc 40736
Query: 1369 ttagagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaatcggaaatg 1428
|||||| ||||||||||||||||||||| || ||||||||||||||| |||| ||||| |
Sbjct: 40735 ttagagttgcaatggggcatcctgaaccatttccagtcaaatatgttacaattggaaacg 40676
Query: 1429 aaga 1432
||||
Sbjct: 40675 aaga 40672
Score = 133 bits (67), Expect = 3e-27
Identities = 124/143 (86%)
Strand = Plus / Minus
Query: 848 agttgctggcacttccaactggacaaaagtggagcaaaaattgattgctaaagggacaaa 907
||||||||| || || || ||||||||| | ||||| || ||| |||||||||| |||||
Sbjct: 42238 agttgctggtacatcaaattggacaaaacttgagcagaagttggttgctaaaggaacaaa 42179
Query: 908 cagaacctcaagacttcagataacatctaacaagaagggagttgtatggtttgatcaagt 967
|||||||||||| ||||| |||||| |||||||||| || || ||||||| |||||| |
Sbjct: 42178 cagaacctcaaggcttcaaataacaactaacaagaaaggtgtcatatggttggatcaaat 42119
Query: 968 atcactcatgccttcagacacgt 990
|||||||||||||||||||||||
Sbjct: 42118 atcactcatgccttcagacacgt 42096
Score = 133 bits (67), Expect = 3e-27
Identities = 166/199 (83%)
Strand = Plus / Minus
Query: 527 aggttttgaagctggaggactccatacgccatcaaatattgacccatggtctataattgg 586
|||||| ||||||||||| | |||| ||||| | |||||||| ||||| ||||||||
Sbjct: 42857 aggtttcgaagctggaggccctaatactccatcgagcattgacccttggtccataattgg 42798
Query: 587 cgacgactcttccatatttgtggcgactgatcgtacatcatgtttcagtcgaaacattat 646
| || ||| ||||| ||||| |||||||| ||||||||||||||||||| || ||
Sbjct: 42797 aaatgaatctgtcatatcagtggcaactgatcgatcatcatgtttcagtcgaaatatcat 42738
Query: 647 cgctcttaggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaa 706
||||| ||||||||||||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 42737 tgctctgaggatggaggttctctgtggtgactgccaagctggtggtgttggcatttacaa 42678
Query: 707 ccctgggttctggggcatg 725
|| || ||||||||||||
Sbjct: 42677 tccaggattctggggcatg 42659
Score = 131 bits (66), Expect = 1e-26
Identities = 108/122 (88%)
Strand = Plus / Minus
Query: 1455 ggtaattacctcaagttctacaatgctataagagaatcctatccagacattcagatgatt 1514
|||||||||||||||||| | |||||||||||| | |||||||||||||| || ||
Sbjct: 40198 ggtaattacctcaagttccatcgtgctataagagaggcttatccagacattcaaatcatc 40139
Query: 1515 tcaaattgtgatggttcatctaaaccacttgaccatcctgctgatctgtatgacttccat 1574
||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 40138 tcaaactgtgatggttcatctaaaccacttgaccatcctgctgacatatatgacttccat 40079
Query: 1575 gt 1576
||
Sbjct: 40078 gt 40077
Score = 89.7 bits (45), Expect = 5e-14
Identities = 81/93 (87%)
Strand = Plus / Minus
Query: 1808 gtggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactg 1867
|||||| |||| |||| ||||||||||||| ||| |||| || |||| ||||||||||||
Sbjct: 39009 gtggaacccagctgctgtcgtcttcaactcatggaaacagtatggaagtcctagttactg 38950
Query: 1868 gatgcagaagtttttccgcgaatctagtggtgc 1900
|||||||| ||||||||||||| ||||||||
Sbjct: 38949 gatgcagacaattttccgcgaatcgagtggtgc 38917
Score = 77.8 bits (39), Expect = 2e-10
Identities = 87/103 (84%)
Strand = Plus / Minus
Query: 1645 aggcctttgtcagtgagtatgcggtatggagaactgatgcaggtagaggaagccttcttg 1704
|||||||||||||||||||||| || | || | || || ||||||||||| |||||||
Sbjct: 39415 aggcctttgtcagtgagtatgctgtttcaagtaatggtgtaggtagaggaactcttcttg 39356
Query: 1705 gttcactggcagaggctgccttccttactgggctggagaagaa 1747
|||||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 39355 cctcactggctgaggctgctttcctcactggactggagaagaa 39313
Score = 73.8 bits (37), Expect = 3e-09
Identities = 88/105 (83%)
Strand = Plus / Minus
Query: 725 gaacatagaagatggaaagacctacaatctagttatgtatgttaaatcagcagaagctgc 784
||||||||| |||||||||| ||||| ||| || ||||||| ||||||| |||| | |
Sbjct: 42443 gaacatagaggatggaaagaactacagtcttgtcatgtatgctaaatcattagaaaatac 42384
Query: 785 agaattgacagtttcattagcaagctccgatgggttgcagaatct 829
||| || ||||||||| || ||||||| ||||||||||| |||||
Sbjct: 42383 agagttaacagtttcactaacaagctctgatgggttgcaaaatct 42339
Score = 61.9 bits (31), Expect = 1e-05
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 472 aggagatcaaccatgcaggagccggtggcatatgggcagaacttgttagtaatagaggt 530
|||||||||||||||| ||||| ||||| ||||||||||| ||||| || || ||||||
Sbjct: 43362 aggagatcaaccatgctggagcaggtggaatatgggcagagcttgtcagcaacagaggt 43304
Score = 61.9 bits (31), Expect = 1e-05
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 404 cctcaaggttgatgcctcatcacagcttgcccgaaagataccagacacactgtttgggat 463
||||||||||||||||||| | |||| ||| |||||||| || || ||||| ||||||||
Sbjct: 43547 cctcaaggttgatgcctcaccgcagcatgctcgaaagatccctgagacactctttgggat 43488
Query: 464 gttttttgagg 474
||||| ||||
Sbjct: 43487 atttttcgagg 43477
Score = 58.0 bits (29), Expect = 2e-04
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1210 agctttctgaagacctgggggctgctccaatctgggtattcaacaatgg 1258
|||||||||| || ||||| ||||| ||||||||||| |||||||||||
Sbjct: 41459 agctttctgaggatctgggtgctgccccaatctgggtgttcaacaatgg 41411
Score = 54.0 bits (27), Expect = 0.003
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1021 tatccatgcttttggatctaaaaccacgattcttgagatttcctggt 1067
|||| |||||||||||| ||||||||| |||| |||| |||||||||
Sbjct: 41812 tatcaatgcttttggatttaaaaccacaattcatgaggtttcctggt 41766
Score = 46.1 bits (23), Expect = 0.61
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1748 cagtgatattgttcatatggcaagttatgcaccgctctt 1786
||||||| ||||||| ||||| || ||||||||||||||
Sbjct: 39152 cagtgatgttgttcagatggccagctatgcaccgctctt 39114
>gb|AC169378.2 | Sorghum bicolor clone SB_BBc0007L02, complete sequence
Length = 138518
Score = 135 bits (68), Expect = 9e-28
Identities = 125/144 (86%)
Strand = Plus / Minus
Query: 1068 ggttgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctattggt 1127
|||||||| ||||||||||| |||||||||||| ||||| |||| |||| ||||||||
Sbjct: 117799 ggttgctttgttgaaggcgaccagttaagaaatgctttcagatggaaggaaactattggt 117740
Query: 1128 ccatgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggc 1187
|||||||||||||| |||||||||| ||||| ||||| | |||||||| || ||||||
Sbjct: 117739 ccatgggaagagagacctggacactatggagacttttggaaatactggaccgatgatggc 117680
Query: 1188 cttggatattatgagtttcttcag 1211
||||| |||| |||||||||||||
Sbjct: 117679 cttgggtattttgagtttcttcag 117656
Score = 87.7 bits (44), Expect = 2e-13
Identities = 98/116 (84%)
Strand = Plus / Minus
Query: 1461 tacctcaagttctacaatgctataagagaatcctatccagacattcagatgatttcaaat 1520
|||||||| || || || ||||||||| || |||||||||||||||| || ||||||||
Sbjct: 115350 tacctcaaattttataaagctataagaaaagcctatccagacattcaaattatttcaaac 115291
Query: 1521 tgtgatggttcatctaaaccacttgaccatcctgctgatctgtatgacttccatgt 1576
|| ||||| |||||| | ||| || |||||||||| ||| |||||||| |||||||
Sbjct: 115290 tgcgatggctcatctcagccatttcaccatcctgcagatatgtatgacgtccatgt 115235
Score = 83.8 bits (42), Expect = 3e-12
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 1827 gtcttcaactcctggcaacaatacggaactcctagttactggatgcagaagtttttccgc 1886
||||||||||| |||||||| ||||||||||| |||||||||||||||| ||||||||
Sbjct: 114278 gtcttcaactcgtggcaacagtacggaactccgagttactggatgcagacatttttccgt 114219
Query: 1887 gaatctagtggtgc 1900
||||| || |||||
Sbjct: 114218 gaatcaagcggtgc 114205
Score = 71.9 bits (36), Expect = 1e-08
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 1307 aaaggatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctc 1366
|||||||||| |||| ||||| || ||||| ||||| | |||| | ||||| ||||||||
Sbjct: 116853 aaaggatgtactggacagtcttgagtttgccaggggaactgcagagtcaacttggggctc 116794
Query: 1367 tgttagagctgcaatggggcatcctgaaccgttccc 1402
||| |||||| |||||||||||| ||||| |||||
Sbjct: 116793 tgtaagagctaaaatggggcatccagaacctttccc 116758
Score = 61.9 bits (31), Expect = 1e-05
Identities = 157/199 (78%)
Strand = Plus / Minus
Query: 527 aggttttgaagctggaggactccatacgccatcaaatattgacccatggtctataattgg 586
|||||||||||||||||| | | | || || ||||| || ||||||||| || |||||
Sbjct: 122345 aggttttgaagctggagggccctacaccccttcaaacatagacccatggaacatcattgg 122286
Query: 587 cgacgactcttccatatttgtggcgactgatcgtacatcatgtttcagtcgaaacattat 646
|| || |||||||||| ||| ||||||| | | || ||||||| | |||| ||| |
Sbjct: 122285 agatgagtcttccatatacgtgacgactgaagctgcctcctgtttcactagaaatattgt 122226
Query: 647 cgctcttaggatggaggttctctgtgatgactgcccagccagtggtgttggcatttacaa 706
||||| || ||||||||||||||||| | |||| | | | || ||||||||||||||
Sbjct: 122225 tgctctaagaatggaggttctctgtgacaattgccgaactgggggcgttggcatttacaa 122166
Query: 707 ccctgggttctggggcatg 725
||| || ||||||||||||
Sbjct: 122165 cccgggattctggggcatg 122147
Score = 52.0 bits (26), Expect = 0.010
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1692 ggaagccttcttggttcactggcagaggctgccttcct 1729
|||||||| |||| |||||||||||||||||| |||||
Sbjct: 114641 ggaagcctccttgcttcactggcagaggctgcattcct 114604
Score = 52.0 bits (26), Expect = 0.010
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 952 tatggtttgatcaagtatcactcatgccttcaga 985
|||||||||||||||| || ||||||||||||||
Sbjct: 121455 tatggtttgatcaagtgtcgctcatgccttcaga 121422
Score = 46.1 bits (23), Expect = 0.61
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 472 aggagatcaaccatgcaggagccggtggcatatgggcagaacttgttagtaatagaggt 530
|||||||||||||||| ||||| ||||| || |||| || |||||||| || ||||||
Sbjct: 122885 aggagatcaaccatgcgggagctggtggaatctgggaggagcttgttagcaacagaggt 122827
Score = 44.1 bits (22), Expect = 2.4
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 725 gaacatagaagatggaaagacctacaatctagttatgtatgt 766
|||||||||||| || || ||||| |||||||| ||||||||
Sbjct: 121782 gaacatagaagaggggaaaacctataatctagtcatgtatgt 121741
>dbj|AB073311.1 | Pyrus pyrifolia PPARF1 mRNA for alpha-L-arabinofuranosidase, complete
cds
Length = 2345
Score = 123 bits (62), Expect = 3e-24
Identities = 197/242 (81%)
Strand = Plus / Plus
Query: 1039 taaaaccacgattcttgagatttcctggtggttgcttcgttgaaggcgaatggttaagaa 1098
||||||| || || || |||||||| ||||| || ||||||||||| ||||||||| | |
Sbjct: 972 taaaacctcggtttttcagatttccaggtggctgtttcgttgaaggtgaatggttacgca 1031
Query: 1099 atgcattcaggtggagggaatctattggtccatgggaagagaggcctggacacttcggag 1158
||||||| | |||| ||| | ||||| || ||||||||||| ||||||||||| || |
Sbjct: 1032 atgcatttcgttggaaagaaacaattggaccctgggaagagagacctggacactttggtg 1091
Query: 1159 atgtttggcattactggactgacgatggccttggatattatgagtttcttcagctttctg 1218
|||||||| | ||||||||||||||||| ||||| |||| ||||||||| || || || |
Sbjct: 1092 atgtttggaagtactggactgacgatggacttggttattttgagtttctccaactatcag 1151
Query: 1219 aagacctgggggctgctccaatctgggtattcaacaatggaatcagccacaatgatgaag 1278
| ||||| || | ||||| ||||| ||||| || |||||||| ||||||||| |||
Sbjct: 1152 aggaccttggctcattgccaatatgggtgttcaataacggaatcagtcacaatgatcaag 1211
Query: 1279 tt 1280
||
Sbjct: 1212 tt 1213
Score = 69.9 bits (35), Expect = 4e-08
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 690 ggtgttggcatttacaaccctgggttctggggcatgaacatagaagatggaaagacctac 749
|||||||| ||||| ||||||||||||||||||||||| |||||| | || ||||| |||
Sbjct: 617 ggtgttggaatttataaccctgggttctggggcatgaatatagaaaaagggaagacatac 676
Query: 750 aat 752
|||
Sbjct: 677 aat 679
Score = 54.0 bits (27), Expect = 0.003
Identities = 90/111 (81%)
Strand = Plus / Plus
Query: 1409 atatgttgcaatcggaaatgaagattgtgggaaaaaatactacctcggtaattacctcaa 1468
||||||||| || || ||||| |||||||| ||||| |||||| || |||||||| ||
Sbjct: 1342 atatgttgctatagggaatgaggattgtggaaaaaagaactaccgaggaaattaccttaa 1401
Query: 1469 gttctacaatgctataagagaatcctatccagacattcagatgatttcaaa 1519
||||| | |||||||||| | ||||||| ||||| | |||||||||||
Sbjct: 1402 gttctttagtgctataagaaatgcctatcctgacatcaaaatgatttcaaa 1452
Score = 46.1 bits (23), Expect = 0.61
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 447 gacacactgtttgggatgttttttgaggagatcaaccatgcaggagccggtggcatatgg 506
||||| ||||| || || || ||||||||||| |||||||| || || || || | |||
Sbjct: 359 gacacgctgttcggaattttctttgaggagattaaccatgctggtgctggcggggtgtgg 418
Query: 507 gcagaacttgttagtaatagaggttttgaagctgg 541
|| || ||||| || || |||||||||||||||||
Sbjct: 419 gctgagcttgtaagcaacagaggttttgaagctgg 453
Score = 42.1 bits (21), Expect = 9.5
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1728 cttactgggctggagaagaacagtgatattgtt 1760
|||| ||| |||||||| |||||||||||||||
Sbjct: 1661 cttattggactggagaaaaacagtgatattgtt 1693
>gb|AY309436.1 | Malus x domestica alpha-L-arabinofuranosidase (AFase1) mRNA, complete
cds
Length = 2489
Score = 115 bits (58), Expect = 8e-22
Identities = 196/242 (80%)
Strand = Plus / Plus
Query: 1039 taaaaccacgattcttgagatttcctggtggttgcttcgttgaaggcgaatggttaagaa 1098
||||||| || || || |||||||| ||||| || ||||||||||| ||||||||| | |
Sbjct: 951 taaaacctcggtttttcagatttccaggtggctgtttcgttgaaggtgaatggttacgca 1010
Query: 1099 atgcattcaggtggagggaatctattggtccatgggaagagaggcctggacacttcggag 1158
||||||| | |||| ||| | ||||| || ||||||||||| ||||||||||| || |
Sbjct: 1011 atgcatttcgttggaaagaaacaattggaccctgggaagagagacctggacactttggtg 1070
Query: 1159 atgtttggcattactggactgacgatggccttggatattatgagtttcttcagctttctg 1218
|||||||| ||||||||||||||||| ||||| |||| ||||||||| || || || |
Sbjct: 1071 atgtttggatgtactggactgacgatggacttggttattttgagtttctccaactatcag 1130
Query: 1219 aagacctgggggctgctccaatctgggtattcaacaatggaatcagccacaatgatgaag 1278
| ||||| || | ||||| ||||| ||||| || |||||||| ||||||||| |||
Sbjct: 1131 aggaccttggctcattgccaatatgggtgttcaataacggaatcagtcacaatgatcaag 1190
Query: 1279 tt 1280
||
Sbjct: 1191 tt 1192
Score = 69.9 bits (35), Expect = 4e-08
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 690 ggtgttggcatttacaaccctgggttctggggcatgaacatagaagatggaaagacctac 749
|||||||| ||||| ||||||||||||||||||||||| |||||| | || ||||| |||
Sbjct: 596 ggtgttggaatttataaccctgggttctggggcatgaatatagaaaaagggaagacatac 655
Query: 750 aat 752
|||
Sbjct: 656 aat 658
Score = 67.9 bits (34), Expect = 2e-07
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1728 cttactgggctggagaagaacagtgatattgttcatatggcaagttatgcaccgctcttt 1787
|||| ||| |||||||| ||||||||||||||| | |||||||| |||||||| ||||||
Sbjct: 1640 cttattggactggagaaaaacagtgatattgttgagatggcaagctatgcaccactcttt 1699
Query: 1788 gt 1789
||
Sbjct: 1700 gt 1701
Score = 61.9 bits (31), Expect = 1e-05
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 1409 atatgttgcaatcggaaatgaagattgtgggaaaaaatactacctcggtaattacctcaa 1468
||||||||| || || ||||| |||||||| ||||| |||||| || |||||||| ||
Sbjct: 1321 atatgttgctatagggaatgaggattgtggaaaaaagaactaccgaggaaattaccttaa 1380
Query: 1469 gttctacaatgctataagagaatcctatccagacattcagatgatttcaaa 1519
|||||| | |||||||||| | ||||||| ||||| | |||||||||||
Sbjct: 1381 gttctatagtgctataagaaacgcctatcctgacatcaaaatgatttcaaa 1431
Score = 54.0 bits (27), Expect = 0.003
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 447 gacacactgtttgggatgttttttgaggagatcaaccatgcaggagccggtggcatatgg 506
||||| |||||||| || || ||||||||||| |||||||| || || || || | |||
Sbjct: 338 gacacgctgtttggaattttctttgaggagattaaccatgctggtgctggcggggtgtgg 397
Query: 507 gcagaacttgttagtaatagaggttttgaagctgg 541
|| || ||||| || || |||||||||||||||||
Sbjct: 398 gctgagcttgtaagcaacagaggttttgaagctgg 432
>dbj|AK242628.1 | Oryza sativa (japonica cultivar-group) cDNA, clone: J090020K10, full
insert sequence
Length = 4304
Score = 113 bits (57), Expect = 3e-21
Identities = 97/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 1311 gatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctgtt 1370
||||||||||||||||| |||||||||||||| |||||| | |||||| ||||||||||
Sbjct: 1953 gatgtattggatagtcttgaatttgcaaggggaagtgcagaatcaacactgggctctgtt 2012
Query: 1371 agagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaa 1419
||||||||||||||||| |||||| |||||| || || ||||||||||
Sbjct: 2013 agagctgcaatggggcaatctgaacggttccc-gtgaagtatgttgcaa 2060
Score = 105 bits (53), Expect = 8e-19
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 1492 cctatccagacattcagatgatttcaaattgtgatggttcatctaaaccacttgaccatc 1551
|||||||||||||||| ||||||||||| | |||||| ||||||| |||||||||||||
Sbjct: 2210 cctatccagacattcaaatgatttcaaactttgatggatcatctaggccacttgaccatc 2269
Query: 1552 ctgctgatctgtatgacttccatgt 1576
|||||||| ||||||| ||||||||
Sbjct: 2270 ctgctgatttgtatgatttccatgt 2294
Score = 83.8 bits (42), Expect = 3e-12
Identities = 134/164 (81%), Gaps = 3/164 (1%)
Strand = Plus / Plus
Query: 1809 tggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactgg 1868
|||||||||||||| || || ||||| ||||||||||| || ||||||| |||||| |||
Sbjct: 2865 tggaatccagatgcaattgtgttcaattcctggcaacagtatggaactcatagttattgg 2924
Query: 1869 atgcaga---agtttttccgcgaatctagtggtgccatgattcatccaattacaatcagt 1925
||||||| | | |||||| ||||| |||||| | |||||||||| |||| ||||||
Sbjct: 2925 atgcagacataatatttccgtgaatcaagtggttctgtgattcatccgattatgatcagt 2984
Query: 1926 tccagctactctggttctctagcagcatctgctatcacctggca 1969
|| ||||||||| | | | || |||||||| |||||||||||
Sbjct: 2985 tctggctactctgatgcgttggctgcatctgcaatcacctggca 3028
Score = 58.0 bits (29), Expect = 2e-04
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1692 ggaagccttcttggttcactggcagaggctgccttccttactggg 1736
||||| ||||||| ||||||||| |||||||| ||||||||||||
Sbjct: 2341 ggaagacttcttgcttcactggctgaggctgctttccttactggg 2385
>dbj|AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
Length = 35954743
Score = 113 bits (57), Expect = 3e-21
Identities = 97/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 1311 gatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctgtt 1370
||||||||||||||||| |||||||||||||| |||||| | |||||| ||||||||||
Sbjct: 15687142 gatgtattggatagtcttgaatttgcaaggggaagtgcagaatcaacactgggctctgtt 15687201
Query: 1371 agagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaa 1419
||||||||||||||||| |||||| |||||| || || ||||||||||
Sbjct: 15687202 agagctgcaatggggcaatctgaacggttccc-gtgaagtatgttgcaa 15687249
Score = 105 bits (53), Expect = 8e-19
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 1492 cctatccagacattcagatgatttcaaattgtgatggttcatctaaaccacttgaccatc 1551
|||||||||||||||| ||||||||||| | |||||| ||||||| |||||||||||||
Sbjct: 15687646 cctatccagacattcaaatgatttcaaactttgatggatcatctaggccacttgaccatc 15687705
Query: 1552 ctgctgatctgtatgacttccatgt 1576
|||||||| ||||||| ||||||||
Sbjct: 15687706 ctgctgatttgtatgatttccatgt 15687730
Score = 83.8 bits (42), Expect = 3e-12
Identities = 134/164 (81%), Gaps = 3/164 (1%)
Strand = Plus / Plus
Query: 1809 tggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactgg 1868
|||||||||||||| || || ||||| ||||||||||| || ||||||| |||||| |||
Sbjct: 15688879 tggaatccagatgcaattgtgttcaattcctggcaacagtatggaactcatagttattgg 15688938
Query: 1869 atgcaga---agtttttccgcgaatctagtggtgccatgattcatccaattacaatcagt 1925
||||||| | | |||||| ||||| |||||| | |||||||||| |||| ||||||
Sbjct: 15688939 atgcagacataatatttccgtgaatcaagtggttctgtgattcatccgattatgatcagt 15688998
Query: 1926 tccagctactctggttctctagcagcatctgctatcacctggca 1969
|| ||||||||| | | | || |||||||| |||||||||||
Sbjct: 15688999 tctggctactctgatgcgttggctgcatctgcaatcacctggca 15689042
Score = 58.0 bits (29), Expect = 2e-04
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1692 ggaagccttcttggttcactggcagaggctgccttccttactggg 1736
||||| ||||||| ||||||||| |||||||| ||||||||||||
Sbjct: 15688355 ggaagacttcttgcttcactggctgaggctgctttccttactggg 15688399
>dbj|AP005514.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0035A24
Length = 176446
Score = 113 bits (57), Expect = 3e-21
Identities = 97/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 1311 gatgtattggatagtctagaatttgcaagggggagtgcaaactcaacatggggctctgtt 1370
||||||||||||||||| |||||||||||||| |||||| | |||||| ||||||||||
Sbjct: 95829 gatgtattggatagtcttgaatttgcaaggggaagtgcagaatcaacactgggctctgtt 95888
Query: 1371 agagctgcaatggggcatcctgaaccgttcccagtcaaatatgttgcaa 1419
||||||||||||||||| |||||| |||||| || || ||||||||||
Sbjct: 95889 agagctgcaatggggcaatctgaacggttccc-gtgaagtatgttgcaa 95936
Score = 105 bits (53), Expect = 8e-19
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 1492 cctatccagacattcagatgatttcaaattgtgatggttcatctaaaccacttgaccatc 1551
|||||||||||||||| ||||||||||| | |||||| ||||||| |||||||||||||
Sbjct: 96333 cctatccagacattcaaatgatttcaaactttgatggatcatctaggccacttgaccatc 96392
Query: 1552 ctgctgatctgtatgacttccatgt 1576
|||||||| ||||||| ||||||||
Sbjct: 96393 ctgctgatttgtatgatttccatgt 96417
Score = 83.8 bits (42), Expect = 3e-12
Identities = 134/164 (81%), Gaps = 3/164 (1%)
Strand = Plus / Plus
Query: 1809 tggaatccagatgctatcgtcttcaactcctggcaacaatacggaactcctagttactgg 1868
|||||||||||||| || || ||||| ||||||||||| || ||||||| |||||| |||
Sbjct: 97566 tggaatccagatgcaattgtgttcaattcctggcaacagtatggaactcatagttattgg 97625
Query: 1869 atgcaga---agtttttccgcgaatctagtggtgccatgattcatccaattacaatcagt 1925
||||||| | | |||||| ||||| |||||| | |||||||||| |||| ||||||
Sbjct: 97626 atgcagacataatatttccgtgaatcaagtggttctgtgattcatccgattatgatcagt 97685
Query: 1926 tccagctactctggttctctagcagcatctgctatcacctggca 1969
|| ||||||||| | | | || |||||||| |||||||||||
Sbjct: 97686 tctggctactctgatgcgttggctgcatctgcaatcacctggca 97729
Score = 58.0 bits (29), Expect = 2e-04
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1692 ggaagccttcttggttcactggcagaggctgccttccttactggg 1736
||||| ||||||| ||||||||| |||||||| ||||||||||||
Sbjct: 97042 ggaagacttcttgcttcactggctgaggctgctttccttactggg 97086
>dbj|AP004538.1 | Lotus japonicus genomic DNA, chromosome 1, clone:LjT04C07, TM0098b,
complete sequence
Length = 28884
Score = 93.7 bits (47), Expect = 3e-15
Identities = 119/143 (83%)
Strand = Plus / Plus
Query: 1065 ggtggttgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagggaatctatt 1124
|||||||| || |||||||| ||||||||||||||||| || | |||| ||| |||
Sbjct: 19920 ggtggttgttttgttgaaggagaatggttaagaaatgcttttcgatggaaagaaagcatt 19979
Query: 1125 ggtccatgggaagagaggcctggacacttcggagatgtttggcattactggactgacgat 1184
|| || ||||||||||| || || ||||| || ||||||||| | ||||||||||| |||
Sbjct: 19980 ggaccttgggaagagagaccggggcactttggtgatgtttggaagtactggactgatgat 20039
Query: 1185 ggccttggatattatgagtttct 1207
|||||||| |||| |||||||||
Sbjct: 20040 ggccttggctattttgagtttct 20062
Score = 56.0 bits (28), Expect = 6e-04
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1405 tcaaatatgttgcaatcggaaatgaagattgtgggaaaaa 1444
||||||||||||| |||||||||| ||||||||||||||
Sbjct: 20571 tcaaatatgttgctgtcggaaatgaggattgtgggaaaaa 20610
>ref|NM_111911.3 | Arabidopsis thaliana ASD1; hydrolase, acting on glycosyl bonds
(ASD1) mRNA, complete cds
Length = 2427
Score = 83.8 bits (42), Expect = 3e-12
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 456 tttgggatgttttttgaggagatcaaccatgcaggagccggtggcatatgggcagaactt 515
|||||||| || || ||||||||||||||||| || |||||||| ||||||| ||||||
Sbjct: 425 tttgggattttcttcgaggagatcaaccatgctggtgccggtggattatgggccgaactt 484
Query: 516 gttagtaatagaggttttgaagctgg 541
||||| || ||||| |||||||||||
Sbjct: 485 gttagcaacagagggtttgaagctgg 510
Score = 60.0 bits (30), Expect = 4e-05
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 1680 gatgcaggtagaggaagccttcttggttcactggcagaggctgccttccttactgggctg 1739
||||| |||| |||||||||||||| || || ||||| ||||| || || | ||| ||
Sbjct: 1661 gatgctggtacaggaagccttcttgcctctcttgcagaagctgcgtttctcattggtctt 1720
Query: 1740 gagaagaacagtgatattgttcatatggcaagttatgcaccgctctttgt 1789
|| ||||| ||||| |||||| | |||||||||||||| || ||||||||
Sbjct: 1721 gaaaagaatagtgacattgttgaaatggcaagttatgctccactctttgt 1770
Score = 50.1 bits (25), Expect = 0.039
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1407 aaatatgttgcaatcggaaatgaagattgtgggaaaa 1443
||||| ||||| || ||||||||||||||||||||||
Sbjct: 1388 aaatacgttgctattggaaatgaagattgtgggaaaa 1424
Score = 42.1 bits (21), Expect = 9.5
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 700 tttacaaccctgggttctggggcatgaacatagaagatggaaaga 744
|||| |||||||| | |||||||||||| || ||||| |||||||
Sbjct: 675 tttataaccctggttactggggcatgaatattgaagaaggaaaga 719
>gb|DQ486870.3 | Prunus persica alpha-L-arabinofuranosidase mRNA, complete cds
Length = 2254
Score = 79.8 bits (40), Expect = 4e-11
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 1056 agatttcctggtggttgcttcgttgaaggcgaatggttaagaaatgcattcaggtggagg 1115
|||||||| ||||| || ||||| ||||| |||||| || |||||||||| | ||||
Sbjct: 858 agatttccaggtggctgtttcgtcgaaggtgaatggctacgaaatgcatttcgttggaaa 917
Query: 1116 gaatctattggtccatgggaagagaggcctggacacttcggagatgtttggcattactgg 1175
||| | ||||| || ||||||||||| ||||||||||| || ||||||||| ||||||
Sbjct: 918 gaaacaattggaccctgggaagagagacctggacactttggtgatgtttggatgtactgg 977
Query: 1176 actgacgatggccttggatattatgagtttct 1207
||||| || || |||| |||| |||||||||
Sbjct: 978 actgatgacggaattggttattttgagtttct 1009
Score = 67.9 bits (34), Expect = 2e-07
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1728 cttactgggctggagaagaacagtgatattgttcatatggcaagttatgcaccgctcttt 1787
|||| |||||||||||| ||||||||| ||||| | |||||| |||||||||| ||||||
Sbjct: 1530 cttattgggctggagaaaaacagtgatgttgttgagatggcatgttatgcaccactcttt 1589
Query: 1788 gt 1789
||
Sbjct: 1590 gt 1591
Score = 56.0 bits (28), Expect = 6e-04
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 450 acactgtttgggatgttttttgaggagatcaaccatgcaggagccggtggcatatgggca 509
||||||||||| || || || |||||||| || ||||| || ||||| || |||||||
Sbjct: 231 acactgtttggaattttcttcgaggagattaatcatgctggtgccggcgggctatgggct 290
Query: 510 gaacttgttagtaatagaggttttgaagctgg 541
|| ||||| || || |||||||||||||||||
Sbjct: 291 gagcttgtaagcaacagaggttttgaagctgg 322
Score = 54.0 bits (27), Expect = 0.003
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 688 gtggtgttggcatttacaaccctgggttctggggcatgaacatagaagatggaaagacct 747
||||||| || ||||| || |||||||||||||||||||| || ||| | || |||||||
Sbjct: 484 gtggtgtaggaatttataatcctgggttctggggcatgaatattgaaaaggggaagacct 543
Query: 748 aca 750
|||
Sbjct: 544 aca 546
Score = 54.0 bits (27), Expect = 0.003
Identities = 90/111 (81%)
Strand = Plus / Plus
Query: 1409 atatgttgcaatcggaaatgaagattgtgggaaaaaatactacctcggtaattacctcaa 1468
||||||||| || || ||||| ||||| || ||||| ||||||| || |||||||| ||
Sbjct: 1211 atatgttgctattgggaatgaggattgcggaaaaaagaactacctaggaaattaccttaa 1270
Query: 1469 gttctacaatgctataagagaatcctatccagacattcagatgatttcaaa 1519
|||||| | |||||||| | ||||||||||||| | |||||||||||
Sbjct: 1271 gttctatagtgctataaaacgtgcctatccagacatcaaaatgatttcaaa 1321
Score = 44.1 bits (22), Expect = 2.4
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1637 tggtcccaaggcctttgtcagtgagtatgc 1666
|||||||||||| ||||| |||||||||||
Sbjct: 1439 tggtcccaaggcttttgtgagtgagtatgc 1468
>gb|AC141107.5 | Medicago truncatula clone mth2-34a12, complete sequence
Length = 142659
Score = 65.9 bits (33), Expect = 7e-07
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 1131 tgggaagagaggcctggacacttcggagatgtttggcattactggactgacgatggcctt 1190
||||| ||||| || || |||||||| ||||| ||| | ||||||||||| ||||| |||
Sbjct: 56876 tgggaggagagaccagggcacttcggtgatgtatggaagtactggactgatgatggactt 56935
Query: 1191 ggatattatgagtttct 1207
|| ||||||||||||||
Sbjct: 56936 ggctattatgagtttct 56952
Score = 50.1 bits (25), Expect = 0.039
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 689 tggtgttggcatttacaaccctgggttctggggcatg 725
|||||||||| |||| |||||||| ||||||||||||
Sbjct: 55081 tggtgttggcgtttataaccctggtttctggggcatg 55117
Score = 46.1 bits (23), Expect = 0.61
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1489 aatcctatccagacattcagatgatttcaaattgtgatg 1527
|||| |||||||| ||||| || ||||||||||||||||
Sbjct: 64699 aatcttatccagatattcaaattatttcaaattgtgatg 64737
Score = 44.1 bits (22), Expect = 2.4
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1494 tatccagacattcagatgatttcaaattgtgatg 1527
|||||||| |||| |||||||||||||||||||
Sbjct: 75495 tatccagatattctaatgatttcaaattgtgatg 75528
Score = 42.1 bits (21), Expect = 9.5
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 1748 cagtgatattgttcatatggcaagttatgcaccgctctttgtaaa 1792
|||||||||||| |||||||| ||||| || || || ||||||||
Sbjct: 58472 cagtgatattgtccatatggcgagttacgctccactttttgtaaa 58516
Score = 42.1 bits (21), Expect = 9.5
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1407 aaatatgttgcaatcggaaatgaagattgtggg 1439
||||||||||| || || |||||||||||||||
Sbjct: 74986 aaatatgttgctattggtaatgaagattgtggg 75018
>dbj|AP004537.1 | Lotus japonicus genomic DNA, chromosome 1, clone:LjT04C07, TM0098a,
complete sequence
Length = 33254
Score = 58.0 bits (29), Expect = 2e-04
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1410 tatgttgcaatcggaaatgaagattgtgggaaaaaatactacctcggta 1458
|||||||| || |||||||||||||||||||| ||| ||||||| ||||
Sbjct: 27179 tatgttgctattggaaatgaagattgtgggaagaaaaactacctaggta 27131
Score = 56.0 bits (28), Expect = 6e-04
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 1123 ttggtccatgggaagagaggcctggacacttcggagatgtttgg 1166
|||| |||||||||||||||||||| ||||| || |||||||||
Sbjct: 27763 ttggaccatgggaagagaggcctgggcactttggcgatgtttgg 27720
Score = 54.0 bits (27), Expect = 0.003
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 1473 tacaatgctataagagaatcctatccagacattcagatgatttcaaattgtgatg 1527
|||||||||||| || | | ||||| |||||||| |||||||||||||||||||
Sbjct: 26934 tacaatgctatacgaaaggcttatcctgacattcaaatgatttcaaattgtgatg 26880
Score = 50.1 bits (25), Expect = 0.039
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 1410 tatgttgcaatcggaaatgaagattgtgggaaaaaatactacctcggta 1458
|||||||| || ||||||||||||||||| || ||| ||||||| ||||
Sbjct: 17761 tatgttgctattggaaatgaagattgtggaaagaaaaactacctaggta 17713
Score = 42.1 bits (21), Expect = 9.5
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 527 aggttttgaagctggaggactccatacgccatcaaatattgaccc 571
|||||||||||| |||||| || || |||||||||||||||||
Sbjct: 21924 aggttttgaagcaggaggaacgcaaactccatcaaatattgaccc 21880
>gb|AC119748.1 | Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0042L15, from chromosome 3, complete sequence
Length = 172475
Score = 52.0 bits (26), Expect = 0.010
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 1101 gcattcaggtggagggaatctattggtccatgggaagagaggcctggacacttcggagat 1160
|||||| ||||||| ||| | ||||| || ||||||||||| ||||| ||||| |||
Sbjct: 76737 gcattccggtggagtgaaaccattggaccttgggaagagagacctggtcactttaatgat 76678
Query: 1161 gtttggcattactggactgacgatgg 1186
|||||| |||| |||||||| |||||
Sbjct: 76677 gtttggaattattggactgatgatgg 76652
Score = 42.1 bits (21), Expect = 9.5
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 558 tcaaatattgacccatggtctataattgg 586
||||||||||||||||||| ||||||||
Sbjct: 79603 tcaaatattgacccatggttgataattgg 79575
>emb|AL928852.7 | Zebrafish DNA sequence from clone CH211-287A12, complete sequence
Length = 157466
Score = 42.1 bits (21), Expect = 9.5
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1513 tttcaaattgtgatggttcat 1533
|||||||||||||||||||||
Sbjct: 134456 tttcaaattgtgatggttcat 134436
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 426,395,899
Number of extensions: 22173214
Number of successful extensions: 205734
Number of sequences better than 10.0: 111
Number of HSP's gapped: 205678
Number of HSP's successfully gapped: 428
Length of query: 2491
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2468
Effective length of database: 18,503,978,556
Effective search space: 45667819076208
Effective search space used: 45667819076208
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)