ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf170f14 |
|---|---|
| Clone Library Name | barley_pub |
>O24356:MEN8_SILLA Protein MEN-8 precursor - Silene latifolia (White campion) (Bladder| campion) Length = 100 Score = 41.2 bits (95), Expect = 0.004 Identities = 19/60 (31%), Positives = 25/60 (41%) Frame = +3 Query: 213 CRTYCTVGSTEASPSSACCGAVRGGDFHCLCQYRSVLPNDIDANRAMQIPGKCGYGAANC 392 C Y G+ +PS CC A+ G + C+C V A Q+P C A NC Sbjct: 48 CAPYVVPGAVNTNPSQECCAALSGVNHDCMCNTLRV---------ASQLPSSCNLAALNC 98
>Q40190:M7_LILHE M7 protein precursor - Lilium henryi (Henry's lily)| Length = 89 Score = 35.4 bits (80), Expect = 0.20 Identities = 20/71 (28%), Positives = 32/71 (45%) Frame = +3 Query: 180 CNVDTGSMVRNCRTYCTVGSTEASPSSACCGAVRGGDFHCLCQYRSVLPNDIDANRAMQI 359 C+ G ++ C Y GS A PS CC A++ + CLC+ +++ + + Sbjct: 28 CSAAIGELM-TCGPYVLPGSNGA-PSEQCCSALKAVNHGCLCETINIISS---------L 76 Query: 360 PGKCGYGAANC 392 P C A NC Sbjct: 77 PDHCSLPAVNC 87
>Q43534:LIM2_LILLO LIM2 protein precursor - Lilium longiflorum (Trumpet lily)| Length = 90 Score = 35.4 bits (80), Expect = 0.20 Identities = 20/71 (28%), Positives = 32/71 (45%) Frame = +3 Query: 180 CNVDTGSMVRNCRTYCTVGSTEASPSSACCGAVRGGDFHCLCQYRSVLPNDIDANRAMQI 359 C+ G ++ C Y G+ A PS CC A+R + CLC+ +++ + + Sbjct: 29 CSAAIGELM-TCGPYVLPGNNGA-PSEQCCSALRAVNHGCLCETINIISS---------L 77 Query: 360 PGKCGYGAANC 392 P C A NC Sbjct: 78 PDHCSLPAVNC 88
>Q43533:LIM1_LILLO LIM1 protein precursor - Lilium longiflorum (Trumpet lily)| Length = 90 Score = 35.4 bits (80), Expect = 0.20 Identities = 20/71 (28%), Positives = 32/71 (45%) Frame = +3 Query: 180 CNVDTGSMVRNCRTYCTVGSTEASPSSACCGAVRGGDFHCLCQYRSVLPNDIDANRAMQI 359 C+ G ++ C Y G+ A PS CC A+R + CLC+ +++ + + Sbjct: 29 CSAAIGELM-TCGPYVLPGNNGA-PSEQCCSALRAVNHGCLCETINIISS---------L 77 Query: 360 PGKCGYGAANC 392 P C A NC Sbjct: 78 PDHCSLPAVNC 88
>Q9ZQI8:NLTL2_ARATH Nonspecific lipid-transfer protein-like protein At2g13820 precursor| - Arabidopsis thaliana (Mouse-ear cress) Length = 169 Score = 34.7 bits (78), Expect = 0.34 Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 19/107 (17%) Frame = +3 Query: 186 VDTGSMVRN---CRTYCTVGSTEASPSSACCG----AVRGGDFHCLCQ---YRSVLPNDI 335 VD S++ N C ++ T GST P CC VR G CLC+ L + Sbjct: 25 VDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGP-ECLCEAFKNSGSLGLTL 83 Query: 336 DANRAMQIPGKCGYGA---ANC*F------PSRATSSSIRAGVVCPS 449 D ++A +P C A A C P+ A S AG P+ Sbjct: 84 DLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLSPTAGAGAPA 130
>O24493:MC1_PINRA Male-cone protein 1 precursor - Pinus radiata (Monterey pine)| Length = 92 Score = 34.7 bits (78), Expect = 0.34 Identities = 16/60 (26%), Positives = 24/60 (40%) Frame = +3 Query: 213 CRTYCTVGSTEASPSSACCGAVRGGDFHCLCQYRSVLPNDIDANRAMQIPGKCGYGAANC 392 C + + S PSS CC A++G C+C+ + +P KC A C Sbjct: 38 CTSAVGLSSNGVKPSSECCDALKGTSTSCVCK---------SVRAVISLPAKCNLPALTC 88
>Q40227:LIM3_LILLO LIM3 protein precursor - Lilium longiflorum (Trumpet lily)| Length = 90 Score = 34.3 bits (77), Expect = 0.45 Identities = 17/71 (23%), Positives = 35/71 (49%) Frame = +3 Query: 180 CNVDTGSMVRNCRTYCTVGSTEASPSSACCGAVRGGDFHCLCQYRSVLPNDIDANRAMQI 359 C+ G ++ +C Y G+ + +PS+ CC A++ + CLC+ +++ + + Sbjct: 28 CSAAIGGLM-SCGPYVLPGN-QLTPSTQCCSAIQAVNHGCLCETINIISS---------L 76 Query: 360 PGKCGYGAANC 392 PG C +C Sbjct: 77 PGHCSLPPVSC 87
>Q42976:NLTP3_ORYSA Nonspecific lipid-transfer protein 3 precursor - Oryza sativa| (Rice) Length = 121 Score = 33.1 bits (74), Expect = 1.00 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 14/80 (17%) Frame = +3 Query: 189 DTGSMVRNCRTYCTVGSTEASPSSACCGAVR--------GGDFHCLCQYRSVLPN----- 329 D S + C +Y V E+SPSS+CC VR D C S L N Sbjct: 34 DVTSSIAPCLSY--VMGRESSPSSSCCSGVRTLNGKASSSADRRTAC---SCLKNMASSF 88 Query: 330 -DIDANRAMQIPGKCGYGAA 386 +++ A IP KCG A Sbjct: 89 RNLNMGNAASIPSKCGVSVA 108
>Q9ZVC7:XYP11_ARATH Xylogen-like protein 11 precursor - Arabidopsis thaliana (Mouse-ear| cress) Length = 176 Score = 32.7 bits (73), Expect = 1.3 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 8/68 (11%) Frame = +3 Query: 204 VRNCRTYCTVGSTEASPSSACCGAVRG---GDFHCLCQY--RSVLPN---DIDANRAMQI 359 V +C +Y VGS E P +ACC + G C+C P +D RA Q+ Sbjct: 47 VSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECVCNLYGGGASPRFGVKLDKQRAEQL 106 Query: 360 PGKCGYGA 383 CG A Sbjct: 107 STICGVKA 114
>Q38737:FIL1_ANTMA Stamen-specific protein FIL1 precursor - Antirrhinum majus (Garden| snapdragon) Length = 99 Score = 32.3 bits (72), Expect = 1.7 Identities = 16/60 (26%), Positives = 27/60 (45%) Frame = +3 Query: 213 CRTYCTVGSTEASPSSACCGAVRGGDFHCLCQYRSVLPNDIDANRAMQIPGKCGYGAANC 392 C + +G+ +PSS CC A++ D CLC + A ++P +C +C Sbjct: 41 CAPFVVLGAA-TTPSSDCCTALQSVDHECLCNTLRI---------ASRVPAQCNLPPLSC 90
>A0AT31:NLTP5_LENCU Nonspecific lipid-transfer protein 5 precursor - Lens culinaris| (Lentil) Length = 116 Score = 32.0 bits (71), Expect = 2.2 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 12/77 (15%) Frame = +3 Query: 180 CNVDTGSMVRNCRTYCTVGSTEASPSSACCGAV------------RGGDFHCLCQYRSVL 323 C TG + C TY T G PS CCG V R +C+ S + Sbjct: 28 CGAVTGDL-SPCLTYLTGGP---GPSPQCCGGVKKLLAAANTTPDRQAACNCMKSAASSI 83 Query: 324 PNDIDANRAMQIPGKCG 374 ++ N A +PGKCG Sbjct: 84 TK-LNTNNAAALPGKCG 99
>Q42978:NLTP2_ORYSA Nonspecific lipid-transfer protein 2 precursor - Oryza sativa| (Rice) Length = 118 Score = 30.8 bits (68), Expect = 5.0 Identities = 27/85 (31%), Positives = 31/85 (36%), Gaps = 11/85 (12%) Frame = +3 Query: 198 SMVRNCRTYCTVGSTEASPSSACCGAVRG--------GDFHCLCQYRSVLPNDI---DAN 344 S V C +Y GS PS+ACC VR D C + I +A Sbjct: 35 SAVSPCLSYARGGS---GPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAG 91 Query: 345 RAMQIPGKCGYGAANC*FPSRATSS 419 A IP KCG PS SS Sbjct: 92 NAASIPSKCGVSIPYTISPSIDCSS 116
>P23096:NLTP1_ORYSA Nonspecific lipid-transfer protein 1 precursor - Oryza sativa| (Rice) Length = 116 Score = 30.4 bits (67), Expect = 6.5 Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 11/70 (15%) Frame = +3 Query: 198 SMVRNCRTYCTVGSTEASPSSACCGAVRG--------GDFHCLCQYRSVLPNDI---DAN 344 S V C TY G A PS+ACC VR D C I +A Sbjct: 33 SAVGPCLTYARGG---AGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAG 89 Query: 345 RAMQIPGKCG 374 A IP KCG Sbjct: 90 NAASIPSKCG 99 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 78,834,009 Number of extensions: 1367364 Number of successful extensions: 3725 Number of sequences better than 10.0: 13 Number of HSP's gapped: 3719 Number of HSP's successfully gapped: 13 Length of query: 228 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 119 Effective length of database: 70,788,284 Effective search space: 8423805796 Effective search space used: 8423805796 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
