ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf170f05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X56802.1|ASSPE1 Oat spe1 mRNA for arginine decarboxylase (EC 4.1.1.19) Length = 2124 Score = 557 bits (281), Expect = e-155 Identities = 624/737 (84%), Gaps = 6/737 (0%) Strand = Plus / Plus Query: 424 agctacgggctagaggcgggctccaagccggaattgctcatcgcaatgagctaccttacc 483 ||||||||||| ||||| ||||||||||| || ||||| || || ||||||| ||| ||| Sbjct: 386 agctacgggctggaggcaggctccaagccagagttgctgattgccatgagctgcctcacc 445 Query: 484 aaagccaagcccggagccttcctggtgtgcaatggctacaaggacgcggagtatgtggcg 543 ||||||||||| ||||||| |||||| ||||| |||||||||||| ||| ||||| ||| Sbjct: 446 aaagccaagcctggagcctacctggtatgcaacggctacaaggactcggcttatgtcgcg 505 Query: 544 ctggcgctctcggcgcgtgccatgggcctcaatgtcatcatcgtgttggagatggaggag 603 || || || ||||||| ||||||||||| || |||||||||||| |||||||||||||| Sbjct: 506 ctcgccctggcggcgcgcgccatgggcctgaacgtcatcatcgtgctggagatggaggag 565 Query: 604 gagctggacatcgtcatcgaccagagcaacaagctcggggtggagccggtgctgggcgtg 663 |||||||||||||||||||| |||||| ||||||||| |||||||| || | ||||| Sbjct: 566 gagctggacatcgtcatcgaggagagcagcaagctcggcgtggagcccgtcatcggcgtc 625 Query: 664 cgtgccaagcttctcaccaagattccaggccacttcgggtcgactgccggcaagcacggc 723 || |||||||| ||||||||||| || ||||| || || || || |||||||||||||| Sbjct: 626 cgcgccaagctgctcaccaagataccgggccattttggctccacggccggcaagcacggt 685 Query: 724 aagttcggcctgctcgcggagaagatctacgaggtggccaagaagctccagggtctcaac 783 |||||||| || | ||||||||||| || |||||||||||||||||| ||| ||| ||| Sbjct: 686 aagttcgggctaccggcggagaagatttatgaggtggccaagaagctcaaggctctgaac 745 Query: 784 aagctgcactggctcaagctgctacacttccacatcggctccatgatcccgaccacggac 843 |||||||| |||||||||||||| ||||||||| |||||||||||||||||||||| ||| Sbjct: 746 aagctgcattggctcaagctgctgcacttccacgtcggctccatgatcccgaccacagac 805 Query: 844 attgtgtccaatgcagccagggaggcctccggcatctactgcactctggtgaaccagtat 903 ||||| | ||| ||||| || |||||||| | ||||||||| | |||||||| |||| Sbjct: 806 attgtcttcaaggcagctagcgaggcctctgatatctactgcgccctggtgaaggagtac 865 Query: 904 ggtgcgca---gatgaccacgctggactgcggcggagggctcggcgtcgactacgacggc 960 || | | | |||||||||||||||||||||||| ||||| || || ||||||||||| Sbjct: 866 ggggtggagacgatgaccacgctggactgcggcggggggctgggagtggactacgacggg 925 Query: 961 acccggtcaggtagctccgacatgtcggtggcatatgggttggaggagtatgcgtccagc 1020 ||||| || || |||||||||||||| ||||| || ||| |||||||||| ||||||||| Sbjct: 926 acccgttcgggcagctccgacatgtccgtggcgtacgggctggaggagtacgcgtccagc 985 Query: 1021 attgtgcaggcggtgcggctcacgtgcgagtacaatggtggcgttccccaccctgttttg 1080 || ||||||||||||||||||| ||||| || || ||||| |||||||| ||| | Sbjct: 986 atcgtgcaggcggtgcggctcaagtgcg---actatcacggcgtcccccaccccgttcta 1042 Query: 1081 tgcaccgagagcggccgcgccatggtgtcgcatcactcgatgatcatcctcgaggccctc 1140 ||||||||||| || |||||||||| ||| | ||||| ||||||||||| ||||| ||| Sbjct: 1043 tgcaccgagagtgggcgcgccatggcgtcataccactccatgatcatcctggaggcgctc 1102 Query: 1141 tcggcgatccctgagcc 1157 || |||||||| ||||| Sbjct: 1103 tccgcgatccccgagcc 1119 Score = 188 bits (95), Expect = 5e-44 Identities = 209/247 (84%) Strand = Plus / Plus Query: 1268 acatccagaagcacgggatcgagatgtacaagctggccaagaagctctccaagcggatcg 1327 ||||| |||||||||| ||||||||||||||||||| ||||||||||||||| | || Sbjct: 1227 acatcaagaagcacggcatcgagatgtacaagctgggaaagaagctctccaagagcgtca 1286 Query: 1328 ccggggacgccaacaccatctacaactaccacatgaacctctccatcttctcgctcgttc 1387 || || ||| |||||||||| |||||||||||||||||||| |||||||||| | | Sbjct: 1287 ccaccgatgcccacaccatctataactaccacatgaacctctcggtcttctcgctaatgc 1346 Query: 1388 ccgacttctggggcatcaagcacctcttcccgatgatgcccgcgagccggctcaacgaga 1447 |||||| |||||||||| |||| || |||||||||||||| | ||||||||| | |||| Sbjct: 1347 ccgactactggggcatccagcatctgttcccgatgatgccggtgagccggctagatgaga 1406 Query: 1448 agccgactcaaatgggcacgctcatcgacatcacatgcgacagcgacggaaaggttgaca 1507 |||||||||| | || ||||||| |||| |||| |||||||||||||| || || |||| Sbjct: 1407 agccgactcacaaggccacgctcgtcgatgtcacctgcgacagcgacggcaaagtcgaca 1466 Query: 1508 agttcat 1514 ||||||| Sbjct: 1467 agttcat 1473 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 250 atgatcctccgcttccccggcgtgctcaagcaccgcgtcgactcgctccacgttgcattc 309 |||||||| |||||||||| ||||| | ||||||| || ||||||||||| |||||| Sbjct: 212 atgatccttcgcttccccgatgtgctgaggcaccgcatcaactcgctccacaccgcattc 271 Query: 310 gagaacgccatcaagcacacc 330 | |||||||||||| ||||| Sbjct: 272 gccaacgccatcaagtacacc 292 Score = 56.0 bits (28), Expect = 5e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 1535 ccggcgcgtaccaggaagccctttcttgcaagcataacctgttcggcggccc 1586 |||||||||||||||| ||||| || |||||| ||||||||||||||||| Sbjct: 1548 ccggcgcgtaccaggaggccctatccaacaagcacaacctgttcggcggccc 1599 Score = 42.1 bits (21), Expect = 7.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 349 cagggcgtgtacccagtgaaggtgaatcagaacaagg 385 |||||||||| ||| ||||||||||| ||| |||||| Sbjct: 311 cagggcgtgttcccggtgaaggtgaaccagcacaagg 347
>emb|CT834018.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA239J22, full insert sequence Length = 2073 Score = 329 bits (166), Expect = 2e-86 Identities = 352/414 (85%) Strand = Plus / Plus Query: 349 cagggcgtgtacccagtgaaggtgaatcagaacaaggccatcatcaacgactttgttacc 408 |||||||||| ||| | |||||||| |||||||||||| || || | ||| | || ||| Sbjct: 318 cagggcgtgttccccatcaaggtgaaccagaacaaggccgtcgtccaggacctcgtcacc 377 Query: 409 ttcggccaccgtcatagctacgggctagaggcgggctccaagccggaattgctcatcgca 468 |||||||| | | |||||||| || ||||| |||||||||||||| |||||||||| Sbjct: 378 ttcggccatggctacagctacggcctcgaggctggctccaagccggagctgctcatcgcc 437 Query: 469 atgagctaccttaccaaagccaagcccggagccttcctggtgtgcaatggctacaaggac 528 ||||||| ||| |||| |||||||||||||| | |||||| |||||||||||||||||| Sbjct: 438 atgagctgcctcgccaaggccaagcccggagcttacctggtctgcaatggctacaaggac 497 Query: 529 gcggagtatgtggcgctggcgctctcggcgcgtgccatgggcctcaatgtcatcatcgtg 588 || || || || ||||| |||||||| ||||| |||||||||||||| | |||||||||| Sbjct: 498 gccgactacgtcgcgctcgcgctctccgcgcgcgccatgggcctcaacgccatcatcgtg 557 Query: 589 ttggagatggaggaggagctggacatcgtcatcgaccagagcaacaagctcggggtggag 648 ||||||||||||||||||| ||||||||| |||| |||||| || |||||| || ||| Sbjct: 558 ctggagatggaggaggagctcgacatcgtcgtcgagcagagcgccaggctcggcgtcgag 617 Query: 649 ccggtgctgggcgtgcgtgccaagcttctcaccaagattccaggccacttcgggtcgact 708 ||||| | ||||| || ||||||||||||||||||||||| || |||||||| || || Sbjct: 618 ccggtcatcggcgtccgcgccaagcttctcaccaagattccgggacacttcggctccacg 677 Query: 709 gccggcaagcacggcaagttcggcctgctcgcggagaagatctacgaggtggcc 762 ||||||||||||||||||||||| ||||||| || |||||||||||||||||| Sbjct: 678 gccggcaagcacggcaagttcgggatgctcgccgacaagatctacgaggtggcc 731 Score = 289 bits (146), Expect = 2e-74 Identities = 327/386 (84%), Gaps = 6/386 (1%) Strand = Plus / Plus Query: 784 aagctgcactggctcaagctgctacacttccacatcggctccatgatcccgaccacggac 843 |||||||||||||| |||||||| |||| || |||||||||||||||||||||| ||| Sbjct: 753 aagctgcactggctgaagctgctgcactatcatgtcggctccatgatcccgaccaccgac 812 Query: 844 attgtgtccaatgcagccagggaggcctccggcatctactgcactctggtgaaccagtat 903 || |||| ||| || || |||||| | || ||||||||| | |||||||| || | Sbjct: 813 atcgtgtacaacgcggcggccgaggccgcaggaatctactgcgcgctggtgaaggagcac 872 Query: 904 ggtgcgcag---atgaccacgctggactgcggcggagggctcggcgtcgactacgacggc 960 || ||| | ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 873 ggcgcgacggggatgaccacgctggactgcggcggcgggctcggcgtcgactacgacggg 932 Query: 961 acccggtcaggtagctccgacatgtcggtggcatatgggttggaggagtatgcgtccagc 1020 || ||||| || |||||||||||||||||||| || ||| | ||| |||| ||||||||| Sbjct: 933 acgcggtcgggcagctccgacatgtcggtggcgtacgggctcgagcagtacgcgtccagc 992 Query: 1021 attgtgcaggcggtgcggctcacgtgcgagtacaatggtggcgttccccaccctgttttg 1080 || |||||||||||||||||||||||||| |||| |||||| |||||||| || | Sbjct: 993 atcgtgcaggcggtgcggctcacgtgcgacgacaa---tggcgtcccccacccggtgctc 1049 Query: 1081 tgcaccgagagcggccgcgccatggtgtcgcatcactcgatgatcatcctcgaggccctc 1140 ||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| ||| Sbjct: 1050 tgcaccgagagcggccgcgccatggcgtcgcaccactccatgatcatcctcgaggcgctc 1109 Query: 1141 tcggcgatccctgagcccaaggacga 1166 ||||||||||| ||||| ||||||| Sbjct: 1110 tcggcgatcccggagccgcaggacga 1135 Score = 234 bits (118), Expect = 1e-57 Identities = 211/242 (87%) Strand = Plus / Plus Query: 1274 agaagcacgggatcgagatgtacaagctggccaagaagctctccaagcggatcgccgggg 1333 ||||||||||||||||||||||||||||||| |||||||| |||||| || | |||| | Sbjct: 1261 agaagcacgggatcgagatgtacaagctggcgaagaagctgtccaagagggtgaccggcg 1320 Query: 1334 acgccaacaccatctacaactaccacatgaacctctccatcttctcgctcgttcccgact 1393 |||||||| |||||||||||||||||||||||||||| ||||||| ||||| ||||||| Sbjct: 1321 acgccaacggcatctacaactaccacatgaacctctccgtcttctccctcgtccccgact 1380 Query: 1394 tctggggcatcaagcacctcttcccgatgatgcccgcgagccggctcaacgagaagccga 1453 ||||||||||| || ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 1381 tctggggcatcggccagctcttcccgatgatgccggtgagccggctgaacgagaagccga 1440 Query: 1454 ctcaaatgggcacgctcatcgacatcacatgcgacagcgacggaaaggttgacaagttca 1513 | | |||||||| |||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 1441 ccatcaacggcacgctggtcgacatcacctgcgacagcgacggcaaggtagagaagttca 1500 Query: 1514 tc 1515 || Sbjct: 1501 tc 1502 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 240 ccagtttccgatgatcctccgcttccccggcgtgctcaagcaccgcgtcgactcgctcca 299 |||||| |||||||||||||||||||||| |||||||||| ||||| ||||||| ||||| Sbjct: 209 ccagttcccgatgatcctccgcttccccgacgtgctcaagaaccgcctcgactccctcca 268 Query: 300 cg 301 || Sbjct: 269 cg 270 Score = 67.9 bits (34), Expect = 1e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 79 aagaactacggtgaattgtacaacatcctcggctggggtgaaccttacttcatcgtgaac 138 |||||||||||| || |||||||||||||||| ||||| || || ||||||| ||||||| Sbjct: 21 aagaactacggtcaagtgtacaacatcctcgggtggggcgacccctacttcaccgtgaac 80 Query: 139 acggatggccacct 152 | |||||||||| Sbjct: 81 tcccatggccacct 94 Score = 42.1 bits (21), Expect = 7.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1530 gctgtccggcgcgtaccaggaagccctttcttgcaagcataacctgttc 1578 |||||| || ||||||||||| ||||| | |||||||| ||||||||| Sbjct: 1580 gctgtcgggggcgtaccaggaggccctggcgtgcaagcacaacctgttc 1628
>emb|CR855226.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0616E02-H0507E05, complete sequence Length = 110274 Score = 329 bits (166), Expect = 2e-86 Identities = 352/414 (85%) Strand = Plus / Plus Query: 349 cagggcgtgtacccagtgaaggtgaatcagaacaaggccatcatcaacgactttgttacc 408 |||||||||| ||| | |||||||| |||||||||||| || || | ||| | || ||| Sbjct: 104946 cagggcgtgttccccatcaaggtgaaccagaacaaggccgtcgtccaggacctcgtcacc 105005 Query: 409 ttcggccaccgtcatagctacgggctagaggcgggctccaagccggaattgctcatcgca 468 |||||||| | | |||||||| || ||||| |||||||||||||| |||||||||| Sbjct: 105006 ttcggccatggctacagctacggcctcgaggctggctccaagccggagctgctcatcgcc 105065 Query: 469 atgagctaccttaccaaagccaagcccggagccttcctggtgtgcaatggctacaaggac 528 ||||||| ||| |||| |||||||||||||| | |||||| |||||||||||||||||| Sbjct: 105066 atgagctgcctcgccaaggccaagcccggagcttacctggtctgcaatggctacaaggac 105125 Query: 529 gcggagtatgtggcgctggcgctctcggcgcgtgccatgggcctcaatgtcatcatcgtg 588 || || || || ||||| |||||||| ||||| |||||||||||||| | |||||||||| Sbjct: 105126 gccgactacgtcgcgctcgcgctctccgcgcgcgccatgggcctcaacgccatcatcgtg 105185 Query: 589 ttggagatggaggaggagctggacatcgtcatcgaccagagcaacaagctcggggtggag 648 ||||||||||||||||||| ||||||||| |||| |||||| || |||||| || ||| Sbjct: 105186 ctggagatggaggaggagctcgacatcgtcgtcgagcagagcgccaggctcggcgtcgag 105245 Query: 649 ccggtgctgggcgtgcgtgccaagcttctcaccaagattccaggccacttcgggtcgact 708 ||||| | ||||| || ||||||||||||||||||||||| || |||||||| || || Sbjct: 105246 ccggtcatcggcgtccgcgccaagcttctcaccaagattccgggacacttcggctccacg 105305 Query: 709 gccggcaagcacggcaagttcggcctgctcgcggagaagatctacgaggtggcc 762 ||||||||||||||||||||||| ||||||| || |||||||||||||||||| Sbjct: 105306 gccggcaagcacggcaagttcgggatgctcgccgacaagatctacgaggtggcc 105359 Score = 289 bits (146), Expect = 2e-74 Identities = 327/386 (84%), Gaps = 6/386 (1%) Strand = Plus / Plus Query: 784 aagctgcactggctcaagctgctacacttccacatcggctccatgatcccgaccacggac 843 |||||||||||||| |||||||| |||| || |||||||||||||||||||||| ||| Sbjct: 105381 aagctgcactggctgaagctgctgcactatcatgtcggctccatgatcccgaccaccgac 105440 Query: 844 attgtgtccaatgcagccagggaggcctccggcatctactgcactctggtgaaccagtat 903 || |||| ||| || || |||||| | || ||||||||| | |||||||| || | Sbjct: 105441 atcgtgtacaacgcggcggccgaggccgcaggaatctactgcgcgctggtgaaggagcac 105500 Query: 904 ggtgcgcag---atgaccacgctggactgcggcggagggctcggcgtcgactacgacggc 960 || ||| | ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105501 ggcgcgacggggatgaccacgctggactgcggcggcgggctcggcgtcgactacgacggg 105560 Query: 961 acccggtcaggtagctccgacatgtcggtggcatatgggttggaggagtatgcgtccagc 1020 || ||||| || |||||||||||||||||||| || ||| | ||| |||| ||||||||| Sbjct: 105561 acgcggtcgggcagctccgacatgtcggtggcgtacgggctcgagcagtacgcgtccagc 105620 Query: 1021 attgtgcaggcggtgcggctcacgtgcgagtacaatggtggcgttccccaccctgttttg 1080 || |||||||||||||||||||||||||| |||| |||||| |||||||| || | Sbjct: 105621 atcgtgcaggcggtgcggctcacgtgcgacgacaa---tggcgtcccccacccggtgctc 105677 Query: 1081 tgcaccgagagcggccgcgccatggtgtcgcatcactcgatgatcatcctcgaggccctc 1140 ||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| ||| Sbjct: 105678 tgcaccgagagcggccgcgccatggcgtcgcaccactccatgatcatcctcgaggcgctc 105737 Query: 1141 tcggcgatccctgagcccaaggacga 1166 ||||||||||| ||||| ||||||| Sbjct: 105738 tcggcgatcccggagccgcaggacga 105763 Score = 234 bits (118), Expect = 1e-57 Identities = 211/242 (87%) Strand = Plus / Plus Query: 1274 agaagcacgggatcgagatgtacaagctggccaagaagctctccaagcggatcgccgggg 1333 ||||||||||||||||||||||||||||||| |||||||| |||||| || | |||| | Sbjct: 105889 agaagcacgggatcgagatgtacaagctggcgaagaagctgtccaagagggtgaccggcg 105948 Query: 1334 acgccaacaccatctacaactaccacatgaacctctccatcttctcgctcgttcccgact 1393 |||||||| |||||||||||||||||||||||||||| ||||||| ||||| ||||||| Sbjct: 105949 acgccaacggcatctacaactaccacatgaacctctccgtcttctccctcgtccccgact 106008 Query: 1394 tctggggcatcaagcacctcttcccgatgatgcccgcgagccggctcaacgagaagccga 1453 ||||||||||| || ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 106009 tctggggcatcggccagctcttcccgatgatgccggtgagccggctgaacgagaagccga 106068 Query: 1454 ctcaaatgggcacgctcatcgacatcacatgcgacagcgacggaaaggttgacaagttca 1513 | | |||||||| |||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 106069 ccatcaacggcacgctggtcgacatcacctgcgacagcgacggcaaggtagagaagttca 106128 Query: 1514 tc 1515 || Sbjct: 106129 tc 106130 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 240 ccagtttccgatgatcctccgcttccccggcgtgctcaagcaccgcgtcgactcgctcca 299 |||||| |||||||||||||||||||||| |||||||||| ||||| ||||||| ||||| Sbjct: 104837 ccagttcccgatgatcctccgcttccccgacgtgctcaagaaccgcctcgactccctcca 104896 Query: 300 cg 301 || Sbjct: 104897 cg 104898 Score = 67.9 bits (34), Expect = 1e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 79 aagaactacggtgaattgtacaacatcctcggctggggtgaaccttacttcatcgtgaac 138 |||||||||||| || |||||||||||||||| ||||| || || ||||||| ||||||| Sbjct: 104649 aagaactacggtcaagtgtacaacatcctcgggtggggcgacccctacttcaccgtgaac 104708 Query: 139 acggatggccacct 152 | |||||||||| Sbjct: 104709 tcccatggccacct 104722 Score = 42.1 bits (21), Expect = 7.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1530 gctgtccggcgcgtaccaggaagccctttcttgcaagcataacctgttc 1578 |||||| || ||||||||||| ||||| | |||||||| ||||||||| Sbjct: 106208 gctgtcgggggcgtaccaggaggccctggcgtgcaagcacaacctgttc 106256
>ref|NM_001058553.1| Oryza sativa (japonica cultivar-group) Os04g0107600 (Os04g0107600) mRNA, complete cds Length = 2119 Score = 329 bits (166), Expect = 2e-86 Identities = 352/414 (85%) Strand = Plus / Plus Query: 349 cagggcgtgtacccagtgaaggtgaatcagaacaaggccatcatcaacgactttgttacc 408 |||||||||| ||| | |||||||| |||||||||||| || || | ||| | || ||| Sbjct: 389 cagggcgtgttccccatcaaggtgaaccagaacaaggccgtcgtccaggacctcgtcacc 448 Query: 409 ttcggccaccgtcatagctacgggctagaggcgggctccaagccggaattgctcatcgca 468 |||||||| | | |||||||| || ||||| |||||||||||||| |||||||||| Sbjct: 449 ttcggccatggctacagctacggcctcgaggctggctccaagccggagctgctcatcgcc 508 Query: 469 atgagctaccttaccaaagccaagcccggagccttcctggtgtgcaatggctacaaggac 528 ||||||| ||| |||| |||||||||||||| | |||||| |||||||||||||||||| Sbjct: 509 atgagctgcctcgccaaggccaagcccggagcttacctggtctgcaatggctacaaggac 568 Query: 529 gcggagtatgtggcgctggcgctctcggcgcgtgccatgggcctcaatgtcatcatcgtg 588 || || || || ||||| |||||||| ||||| |||||||||||||| | |||||||||| Sbjct: 569 gccgactacgtcgcgctcgcgctctccgcgcgcgccatgggcctcaacgccatcatcgtg 628 Query: 589 ttggagatggaggaggagctggacatcgtcatcgaccagagcaacaagctcggggtggag 648 ||||||||||||||||||| ||||||||| |||| |||||| || |||||| || ||| Sbjct: 629 ctggagatggaggaggagctcgacatcgtcgtcgagcagagcgccaggctcggcgtcgag 688 Query: 649 ccggtgctgggcgtgcgtgccaagcttctcaccaagattccaggccacttcgggtcgact 708 ||||| | ||||| || ||||||||||||||||||||||| || |||||||| || || Sbjct: 689 ccggtcatcggcgtccgcgccaagcttctcaccaagattccgggacacttcggctccacg 748 Query: 709 gccggcaagcacggcaagttcggcctgctcgcggagaagatctacgaggtggcc 762 ||||||||||||||||||||||| ||||||| || |||||||||||||||||| Sbjct: 749 gccggcaagcacggcaagttcgggatgctcgccgacaagatctacgaggtggcc 802 Score = 297 bits (150), Expect = 8e-77 Identities = 328/386 (84%), Gaps = 6/386 (1%) Strand = Plus / Plus Query: 784 aagctgcactggctcaagctgctacacttccacatcggctccatgatcccgaccacggac 843 |||||||||||||| |||||||| |||| ||| |||||||||||||||||||||| ||| Sbjct: 824 aagctgcactggctgaagctgctgcactaccatgtcggctccatgatcccgaccaccgac 883 Query: 844 attgtgtccaatgcagccagggaggcctccggcatctactgcactctggtgaaccagtat 903 || |||| ||| || || |||||| | || ||||||||| | |||||||| || | Sbjct: 884 atcgtgtacaacgcggcggccgaggccgcaggaatctactgcgcgctggtgaaggagcac 943 Query: 904 ggtgcgcag---atgaccacgctggactgcggcggagggctcggcgtcgactacgacggc 960 || ||| | ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 944 ggcgcgacggggatgaccacgctggactgcggcggcgggctcggcgtcgactacgacggg 1003 Query: 961 acccggtcaggtagctccgacatgtcggtggcatatgggttggaggagtatgcgtccagc 1020 || ||||| || |||||||||||||||||||| || ||| | ||| |||| ||||||||| Sbjct: 1004 acgcggtcgggcagctccgacatgtcggtggcgtacgggctcgagcagtacgcgtccagc 1063 Query: 1021 attgtgcaggcggtgcggctcacgtgcgagtacaatggtggcgttccccaccctgttttg 1080 || |||||||||||||||||||||||||| |||| |||||| |||||||| || | Sbjct: 1064 atcgtgcaggcggtgcggctcacgtgcgacgacaa---tggcgtcccccacccggtgctc 1120 Query: 1081 tgcaccgagagcggccgcgccatggtgtcgcatcactcgatgatcatcctcgaggccctc 1140 ||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| ||| Sbjct: 1121 tgcaccgagagcggccgcgccatggcgtcgcaccactccatgatcatcctcgaggcgctc 1180 Query: 1141 tcggcgatccctgagcccaaggacga 1166 ||||||||||| ||||| ||||||| Sbjct: 1181 tcggcgatcccggagccgcaggacga 1206 Score = 234 bits (118), Expect = 1e-57 Identities = 211/242 (87%) Strand = Plus / Plus Query: 1274 agaagcacgggatcgagatgtacaagctggccaagaagctctccaagcggatcgccgggg 1333 ||||||||||||||||||||||||||||||| |||||||| |||||| || | |||| | Sbjct: 1332 agaagcacgggatcgagatgtacaagctggcgaagaagctgtccaagagggtgaccggcg 1391 Query: 1334 acgccaacaccatctacaactaccacatgaacctctccatcttctcgctcgttcccgact 1393 |||||||| |||||||||||||||||||||||||||| ||||||| ||||| ||||||| Sbjct: 1392 acgccaacggcatctacaactaccacatgaacctctccgtcttctccctcgtccccgact 1451 Query: 1394 tctggggcatcaagcacctcttcccgatgatgcccgcgagccggctcaacgagaagccga 1453 ||||||||||| || ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 1452 tctggggcatcggccagctcttcccgatgatgccggtgagccggctgaacgagaagccga 1511 Query: 1454 ctcaaatgggcacgctcatcgacatcacatgcgacagcgacggaaaggttgacaagttca 1513 | | |||||||| |||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 1512 ccatcaacggcacgctggtcgacatcacctgcgacagcgacggcaaggtagagaagttca 1571 Query: 1514 tc 1515 || Sbjct: 1572 tc 1573 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 240 ccagtttccgatgatcctccgcttccccggcgtgctcaagcaccgcgtcgactcgctcca 299 |||||| |||||||||||||||||||||| |||||||||| ||||| ||||||| ||||| Sbjct: 280 ccagttcccgatgatcctccgcttccccgacgtgctcaagaaccgcctcgactccctcca 339 Query: 300 cg 301 || Sbjct: 340 cg 341 Score = 67.9 bits (34), Expect = 1e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 79 aagaactacggtgaattgtacaacatcctcggctggggtgaaccttacttcatcgtgaac 138 |||||||||||| || |||||||||||||||| ||||| || || ||||||| ||||||| Sbjct: 92 aagaactacggtcaagtgtacaacatcctcgggtggggcgacccctacttcaccgtgaac 151 Query: 139 acggatggccacct 152 | |||||||||| Sbjct: 152 tcccatggccacct 165 Score = 42.1 bits (21), Expect = 7.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1530 gctgtccggcgcgtaccaggaagccctttcttgcaagcataacctgttc 1578 |||||| || ||||||||||| ||||| | |||||||| ||||||||| Sbjct: 1651 gctgtcgggggcgtaccaggaggccctggcgtgcaagcacaacctgttc 1699
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 329 bits (166), Expect = 2e-86 Identities = 352/414 (85%) Strand = Plus / Plus Query: 349 cagggcgtgtacccagtgaaggtgaatcagaacaaggccatcatcaacgactttgttacc 408 |||||||||| ||| | |||||||| |||||||||||| || || | ||| | || ||| Sbjct: 456066 cagggcgtgttccccatcaaggtgaaccagaacaaggccgtcgtccaggacctcgtcacc 456125 Query: 409 ttcggccaccgtcatagctacgggctagaggcgggctccaagccggaattgctcatcgca 468 |||||||| | | |||||||| || ||||| |||||||||||||| |||||||||| Sbjct: 456126 ttcggccatggctacagctacggcctcgaggctggctccaagccggagctgctcatcgcc 456185 Query: 469 atgagctaccttaccaaagccaagcccggagccttcctggtgtgcaatggctacaaggac 528 ||||||| ||| |||| |||||||||||||| | |||||| |||||||||||||||||| Sbjct: 456186 atgagctgcctcgccaaggccaagcccggagcttacctggtctgcaatggctacaaggac 456245 Query: 529 gcggagtatgtggcgctggcgctctcggcgcgtgccatgggcctcaatgtcatcatcgtg 588 || || || || ||||| |||||||| ||||| |||||||||||||| | |||||||||| Sbjct: 456246 gccgactacgtcgcgctcgcgctctccgcgcgcgccatgggcctcaacgccatcatcgtg 456305 Query: 589 ttggagatggaggaggagctggacatcgtcatcgaccagagcaacaagctcggggtggag 648 ||||||||||||||||||| ||||||||| |||| |||||| || |||||| || ||| Sbjct: 456306 ctggagatggaggaggagctcgacatcgtcgtcgagcagagcgccaggctcggcgtcgag 456365 Query: 649 ccggtgctgggcgtgcgtgccaagcttctcaccaagattccaggccacttcgggtcgact 708 ||||| | ||||| || ||||||||||||||||||||||| || |||||||| || || Sbjct: 456366 ccggtcatcggcgtccgcgccaagcttctcaccaagattccgggacacttcggctccacg 456425 Query: 709 gccggcaagcacggcaagttcggcctgctcgcggagaagatctacgaggtggcc 762 ||||||||||||||||||||||| ||||||| || |||||||||||||||||| Sbjct: 456426 gccggcaagcacggcaagttcgggatgctcgccgacaagatctacgaggtggcc 456479 Score = 297 bits (150), Expect = 8e-77 Identities = 328/386 (84%), Gaps = 6/386 (1%) Strand = Plus / Plus Query: 784 aagctgcactggctcaagctgctacacttccacatcggctccatgatcccgaccacggac 843 |||||||||||||| |||||||| |||| ||| |||||||||||||||||||||| ||| Sbjct: 456501 aagctgcactggctgaagctgctgcactaccatgtcggctccatgatcccgaccaccgac 456560 Query: 844 attgtgtccaatgcagccagggaggcctccggcatctactgcactctggtgaaccagtat 903 || |||| ||| || || |||||| | || ||||||||| | |||||||| || | Sbjct: 456561 atcgtgtacaacgcggcggccgaggccgcaggaatctactgcgcgctggtgaaggagcac 456620 Query: 904 ggtgcgcag---atgaccacgctggactgcggcggagggctcggcgtcgactacgacggc 960 || ||| | ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 456621 ggcgcgacggggatgaccacgctggactgcggcggcgggctcggcgtcgactacgacggg 456680 Query: 961 acccggtcaggtagctccgacatgtcggtggcatatgggttggaggagtatgcgtccagc 1020 || ||||| || |||||||||||||||||||| || ||| | ||| |||| ||||||||| Sbjct: 456681 acgcggtcgggcagctccgacatgtcggtggcgtacgggctcgagcagtacgcgtccagc 456740 Query: 1021 attgtgcaggcggtgcggctcacgtgcgagtacaatggtggcgttccccaccctgttttg 1080 || |||||||||||||||||||||||||| |||| |||||| |||||||| || | Sbjct: 456741 atcgtgcaggcggtgcggctcacgtgcgacgacaa---tggcgtcccccacccggtgctc 456797 Query: 1081 tgcaccgagagcggccgcgccatggtgtcgcatcactcgatgatcatcctcgaggccctc 1140 ||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| ||| Sbjct: 456798 tgcaccgagagcggccgcgccatggcgtcgcaccactccatgatcatcctcgaggcgctc 456857 Query: 1141 tcggcgatccctgagcccaaggacga 1166 ||||||||||| ||||| ||||||| Sbjct: 456858 tcggcgatcccggagccgcaggacga 456883 Score = 234 bits (118), Expect = 1e-57 Identities = 211/242 (87%) Strand = Plus / Plus Query: 1274 agaagcacgggatcgagatgtacaagctggccaagaagctctccaagcggatcgccgggg 1333 ||||||||||||||||||||||||||||||| |||||||| |||||| || | |||| | Sbjct: 457009 agaagcacgggatcgagatgtacaagctggcgaagaagctgtccaagagggtgaccggcg 457068 Query: 1334 acgccaacaccatctacaactaccacatgaacctctccatcttctcgctcgttcccgact 1393 |||||||| |||||||||||||||||||||||||||| ||||||| ||||| ||||||| Sbjct: 457069 acgccaacggcatctacaactaccacatgaacctctccgtcttctccctcgtccccgact 457128 Query: 1394 tctggggcatcaagcacctcttcccgatgatgcccgcgagccggctcaacgagaagccga 1453 ||||||||||| || ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 457129 tctggggcatcggccagctcttcccgatgatgccggtgagccggctgaacgagaagccga 457188 Query: 1454 ctcaaatgggcacgctcatcgacatcacatgcgacagcgacggaaaggttgacaagttca 1513 | | |||||||| |||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 457189 ccatcaacggcacgctggtcgacatcacctgcgacagcgacggcaaggtagagaagttca 457248 Query: 1514 tc 1515 || Sbjct: 457249 tc 457250 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 240 ccagtttccgatgatcctccgcttccccggcgtgctcaagcaccgcgtcgactcgctcca 299 |||||| |||||||||||||||||||||| |||||||||| ||||| ||||||| ||||| Sbjct: 455957 ccagttcccgatgatcctccgcttccccgacgtgctcaagaaccgcctcgactccctcca 456016 Query: 300 cg 301 || Sbjct: 456017 cg 456018 Score = 67.9 bits (34), Expect = 1e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 79 aagaactacggtgaattgtacaacatcctcggctggggtgaaccttacttcatcgtgaac 138 |||||||||||| || |||||||||||||||| ||||| || || ||||||| ||||||| Sbjct: 455769 aagaactacggtcaagtgtacaacatcctcgggtggggcgacccctacttcaccgtgaac 455828 Query: 139 acggatggccacct 152 | |||||||||| Sbjct: 455829 tcccatggccacct 455842 Score = 42.1 bits (21), Expect = 7.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1530 gctgtccggcgcgtaccaggaagccctttcttgcaagcataacctgttc 1578 |||||| || ||||||||||| ||||| | |||||||| ||||||||| Sbjct: 457328 gctgtcgggggcgtaccaggaggccctggcgtgcaagcacaacctgttc 457376
>dbj|AK121110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073C19, full insert sequence Length = 2064 Score = 329 bits (166), Expect = 2e-86 Identities = 352/414 (85%) Strand = Plus / Plus Query: 349 cagggcgtgtacccagtgaaggtgaatcagaacaaggccatcatcaacgactttgttacc 408 |||||||||| ||| | |||||||| |||||||||||| || || | ||| | || ||| Sbjct: 320 cagggcgtgttccccatcaaggtgaaccagaacaaggccgtcgtccaggacctcgtcacc 379 Query: 409 ttcggccaccgtcatagctacgggctagaggcgggctccaagccggaattgctcatcgca 468 |||||||| | | |||||||| || ||||| |||||||||||||| |||||||||| Sbjct: 380 ttcggccatggctacagctacggcctcgaggctggctccaagccggagctgctcatcgcc 439 Query: 469 atgagctaccttaccaaagccaagcccggagccttcctggtgtgcaatggctacaaggac 528 ||||||| ||| |||| |||||||||||||| | |||||| |||||||||||||||||| Sbjct: 440 atgagctgcctcgccaaggccaagcccggagcttacctggtctgcaatggctacaaggac 499 Query: 529 gcggagtatgtggcgctggcgctctcggcgcgtgccatgggcctcaatgtcatcatcgtg 588 || || || || ||||| |||||||| ||||| |||||||||||||| | |||||||||| Sbjct: 500 gccgactacgtcgcgctcgcgctctccgcgcgcgccatgggcctcaacgccatcatcgtg 559 Query: 589 ttggagatggaggaggagctggacatcgtcatcgaccagagcaacaagctcggggtggag 648 ||||||||||||||||||| ||||||||| |||| |||||| || |||||| || ||| Sbjct: 560 ctggagatggaggaggagctcgacatcgtcgtcgagcagagcgccaggctcggcgtcgag 619 Query: 649 ccggtgctgggcgtgcgtgccaagcttctcaccaagattccaggccacttcgggtcgact 708 ||||| | ||||| || ||||||||||||||||||||||| || |||||||| || || Sbjct: 620 ccggtcatcggcgtccgcgccaagcttctcaccaagattccgggacacttcggctccacg 679 Query: 709 gccggcaagcacggcaagttcggcctgctcgcggagaagatctacgaggtggcc 762 ||||||||||||||||||||||| ||||||| || |||||||||||||||||| Sbjct: 680 gccggcaagcacggcaagttcgggatgctcgccgacaagatctacgaggtggcc 733 Score = 297 bits (150), Expect = 8e-77 Identities = 328/386 (84%), Gaps = 6/386 (1%) Strand = Plus / Plus Query: 784 aagctgcactggctcaagctgctacacttccacatcggctccatgatcccgaccacggac 843 |||||||||||||| |||||||| |||| ||| |||||||||||||||||||||| ||| Sbjct: 755 aagctgcactggctgaagctgctgcactaccatgtcggctccatgatcccgaccaccgac 814 Query: 844 attgtgtccaatgcagccagggaggcctccggcatctactgcactctggtgaaccagtat 903 || |||| ||| || || |||||| | || ||||||||| | |||||||| || | Sbjct: 815 atcgtgtacaacgcggcggccgaggccgcaggaatctactgcgcgctggtgaaggagcac 874 Query: 904 ggtgcgcag---atgaccacgctggactgcggcggagggctcggcgtcgactacgacggc 960 || ||| | ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 875 ggcgcgacggggatgaccacgctggactgcggcggcgggctcggcgtcgactacgacggg 934 Query: 961 acccggtcaggtagctccgacatgtcggtggcatatgggttggaggagtatgcgtccagc 1020 || ||||| || |||||||||||||||||||| || ||| | ||| |||| ||||||||| Sbjct: 935 acgcggtcgggcagctccgacatgtcggtggcgtacgggctcgagcagtacgcgtccagc 994 Query: 1021 attgtgcaggcggtgcggctcacgtgcgagtacaatggtggcgttccccaccctgttttg 1080 || |||||||||||||||||||||||||| |||| |||||| |||||||| || | Sbjct: 995 atcgtgcaggcggtgcggctcacgtgcgacgacaa---tggcgtcccccacccggtgctc 1051 Query: 1081 tgcaccgagagcggccgcgccatggtgtcgcatcactcgatgatcatcctcgaggccctc 1140 ||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| ||| Sbjct: 1052 tgcaccgagagcggccgcgccatggcgtcgcaccactccatgatcatcctcgaggcgctc 1111 Query: 1141 tcggcgatccctgagcccaaggacga 1166 ||||||||||| ||||| ||||||| Sbjct: 1112 tcggcgatcccggagccgcaggacga 1137 Score = 234 bits (118), Expect = 1e-57 Identities = 211/242 (87%) Strand = Plus / Plus Query: 1274 agaagcacgggatcgagatgtacaagctggccaagaagctctccaagcggatcgccgggg 1333 ||||||||||||||||||||||||||||||| |||||||| |||||| || | |||| | Sbjct: 1263 agaagcacgggatcgagatgtacaagctggcgaagaagctgtccaagagggtgaccggcg 1322 Query: 1334 acgccaacaccatctacaactaccacatgaacctctccatcttctcgctcgttcccgact 1393 |||||||| |||||||||||||||||||||||||||| ||||||| ||||| ||||||| Sbjct: 1323 acgccaacggcatctacaactaccacatgaacctctccgtcttctccctcgtccccgact 1382 Query: 1394 tctggggcatcaagcacctcttcccgatgatgcccgcgagccggctcaacgagaagccga 1453 ||||||||||| || ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 1383 tctggggcatcggccagctcttcccgatgatgccggtgagccggctgaacgagaagccga 1442 Query: 1454 ctcaaatgggcacgctcatcgacatcacatgcgacagcgacggaaaggttgacaagttca 1513 | | |||||||| |||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 1443 ccatcaacggcacgctggtcgacatcacctgcgacagcgacggcaaggtagagaagttca 1502 Query: 1514 tc 1515 || Sbjct: 1503 tc 1504 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 240 ccagtttccgatgatcctccgcttccccggcgtgctcaagcaccgcgtcgactcgctcca 299 |||||| |||||||||||||||||||||| |||||||||| ||||| ||||||| ||||| Sbjct: 211 ccagttcccgatgatcctccgcttccccgacgtgctcaagaaccgcctcgactccctcca 270 Query: 300 cg 301 || Sbjct: 271 cg 272 Score = 67.9 bits (34), Expect = 1e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 79 aagaactacggtgaattgtacaacatcctcggctggggtgaaccttacttcatcgtgaac 138 |||||||||||| || |||||||||||||||| ||||| || || ||||||| ||||||| Sbjct: 23 aagaactacggtcaagtgtacaacatcctcgggtggggcgacccctacttcaccgtgaac 82 Query: 139 acggatggccacct 152 | |||||||||| Sbjct: 83 tcccatggccacct 96 Score = 42.1 bits (21), Expect = 7.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1530 gctgtccggcgcgtaccaggaagccctttcttgcaagcataacctgttc 1578 |||||| || ||||||||||| ||||| | |||||||| ||||||||| Sbjct: 1582 gctgtcgggggcgtaccaggaggccctggcgtgcaagcacaacctgttc 1630
>dbj|AK058573.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E10, full insert sequence Length = 2119 Score = 329 bits (166), Expect = 2e-86 Identities = 352/414 (85%) Strand = Plus / Plus Query: 349 cagggcgtgtacccagtgaaggtgaatcagaacaaggccatcatcaacgactttgttacc 408 |||||||||| ||| | |||||||| |||||||||||| || || | ||| | || ||| Sbjct: 389 cagggcgtgttccccatcaaggtgaaccagaacaaggccgtcgtccaggacctcgtcacc 448 Query: 409 ttcggccaccgtcatagctacgggctagaggcgggctccaagccggaattgctcatcgca 468 |||||||| | | |||||||| || ||||| |||||||||||||| |||||||||| Sbjct: 449 ttcggccatggctacagctacggcctcgaggctggctccaagccggagctgctcatcgcc 508 Query: 469 atgagctaccttaccaaagccaagcccggagccttcctggtgtgcaatggctacaaggac 528 ||||||| ||| |||| |||||||||||||| | |||||| |||||||||||||||||| Sbjct: 509 atgagctgcctcgccaaggccaagcccggagcttacctggtctgcaatggctacaaggac 568 Query: 529 gcggagtatgtggcgctggcgctctcggcgcgtgccatgggcctcaatgtcatcatcgtg 588 || || || || ||||| |||||||| ||||| |||||||||||||| | |||||||||| Sbjct: 569 gccgactacgtcgcgctcgcgctctccgcgcgcgccatgggcctcaacgccatcatcgtg 628 Query: 589 ttggagatggaggaggagctggacatcgtcatcgaccagagcaacaagctcggggtggag 648 ||||||||||||||||||| ||||||||| |||| |||||| || |||||| || ||| Sbjct: 629 ctggagatggaggaggagctcgacatcgtcgtcgagcagagcgccaggctcggcgtcgag 688 Query: 649 ccggtgctgggcgtgcgtgccaagcttctcaccaagattccaggccacttcgggtcgact 708 ||||| | ||||| || ||||||||||||||||||||||| || |||||||| || || Sbjct: 689 ccggtcatcggcgtccgcgccaagcttctcaccaagattccgggacacttcggctccacg 748 Query: 709 gccggcaagcacggcaagttcggcctgctcgcggagaagatctacgaggtggcc 762 ||||||||||||||||||||||| ||||||| || |||||||||||||||||| Sbjct: 749 gccggcaagcacggcaagttcgggatgctcgccgacaagatctacgaggtggcc 802 Score = 297 bits (150), Expect = 8e-77 Identities = 328/386 (84%), Gaps = 6/386 (1%) Strand = Plus / Plus Query: 784 aagctgcactggctcaagctgctacacttccacatcggctccatgatcccgaccacggac 843 |||||||||||||| |||||||| |||| ||| |||||||||||||||||||||| ||| Sbjct: 824 aagctgcactggctgaagctgctgcactaccatgtcggctccatgatcccgaccaccgac 883 Query: 844 attgtgtccaatgcagccagggaggcctccggcatctactgcactctggtgaaccagtat 903 || |||| ||| || || |||||| | || ||||||||| | |||||||| || | Sbjct: 884 atcgtgtacaacgcggcggccgaggccgcaggaatctactgcgcgctggtgaaggagcac 943 Query: 904 ggtgcgcag---atgaccacgctggactgcggcggagggctcggcgtcgactacgacggc 960 || ||| | ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 944 ggcgcgacggggatgaccacgctggactgcggcggcgggctcggcgtcgactacgacggg 1003 Query: 961 acccggtcaggtagctccgacatgtcggtggcatatgggttggaggagtatgcgtccagc 1020 || ||||| || |||||||||||||||||||| || ||| | ||| |||| ||||||||| Sbjct: 1004 acgcggtcgggcagctccgacatgtcggtggcgtacgggctcgagcagtacgcgtccagc 1063 Query: 1021 attgtgcaggcggtgcggctcacgtgcgagtacaatggtggcgttccccaccctgttttg 1080 || |||||||||||||||||||||||||| |||| |||||| |||||||| || | Sbjct: 1064 atcgtgcaggcggtgcggctcacgtgcgacgacaa---tggcgtcccccacccggtgctc 1120 Query: 1081 tgcaccgagagcggccgcgccatggtgtcgcatcactcgatgatcatcctcgaggccctc 1140 ||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| ||| Sbjct: 1121 tgcaccgagagcggccgcgccatggcgtcgcaccactccatgatcatcctcgaggcgctc 1180 Query: 1141 tcggcgatccctgagcccaaggacga 1166 ||||||||||| ||||| ||||||| Sbjct: 1181 tcggcgatcccggagccgcaggacga 1206 Score = 234 bits (118), Expect = 1e-57 Identities = 211/242 (87%) Strand = Plus / Plus Query: 1274 agaagcacgggatcgagatgtacaagctggccaagaagctctccaagcggatcgccgggg 1333 ||||||||||||||||||||||||||||||| |||||||| |||||| || | |||| | Sbjct: 1332 agaagcacgggatcgagatgtacaagctggcgaagaagctgtccaagagggtgaccggcg 1391 Query: 1334 acgccaacaccatctacaactaccacatgaacctctccatcttctcgctcgttcccgact 1393 |||||||| |||||||||||||||||||||||||||| ||||||| ||||| ||||||| Sbjct: 1392 acgccaacggcatctacaactaccacatgaacctctccgtcttctccctcgtccccgact 1451 Query: 1394 tctggggcatcaagcacctcttcccgatgatgcccgcgagccggctcaacgagaagccga 1453 ||||||||||| || ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 1452 tctggggcatcggccagctcttcccgatgatgccggtgagccggctgaacgagaagccga 1511 Query: 1454 ctcaaatgggcacgctcatcgacatcacatgcgacagcgacggaaaggttgacaagttca 1513 | | |||||||| |||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 1512 ccatcaacggcacgctggtcgacatcacctgcgacagcgacggcaaggtagagaagttca 1571 Query: 1514 tc 1515 || Sbjct: 1572 tc 1573 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 240 ccagtttccgatgatcctccgcttccccggcgtgctcaagcaccgcgtcgactcgctcca 299 |||||| |||||||||||||||||||||| |||||||||| ||||| ||||||| ||||| Sbjct: 280 ccagttcccgatgatcctccgcttccccgacgtgctcaagaaccgcctcgactccctcca 339 Query: 300 cg 301 || Sbjct: 340 cg 341 Score = 67.9 bits (34), Expect = 1e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 79 aagaactacggtgaattgtacaacatcctcggctggggtgaaccttacttcatcgtgaac 138 |||||||||||| || |||||||||||||||| ||||| || || ||||||| ||||||| Sbjct: 92 aagaactacggtcaagtgtacaacatcctcgggtggggcgacccctacttcaccgtgaac 151 Query: 139 acggatggccacct 152 | |||||||||| Sbjct: 152 tcccatggccacct 165 Score = 42.1 bits (21), Expect = 7.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1530 gctgtccggcgcgtaccaggaagccctttcttgcaagcataacctgttc 1578 |||||| || ||||||||||| ||||| | |||||||| ||||||||| Sbjct: 1651 gctgtcgggggcgtaccaggaggccctggcgtgcaagcacaacctgttc 1699
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13, complete sequence Length = 130249 Score = 329 bits (166), Expect = 2e-86 Identities = 352/414 (85%) Strand = Plus / Plus Query: 349 cagggcgtgtacccagtgaaggtgaatcagaacaaggccatcatcaacgactttgttacc 408 |||||||||| ||| | |||||||| |||||||||||| || || | ||| | || ||| Sbjct: 94818 cagggcgtgttccccatcaaggtgaaccagaacaaggccgtcgtccaggacctcgtcacc 94877 Query: 409 ttcggccaccgtcatagctacgggctagaggcgggctccaagccggaattgctcatcgca 468 |||||||| | | |||||||| || ||||| |||||||||||||| |||||||||| Sbjct: 94878 ttcggccatggctacagctacggcctcgaggctggctccaagccggagctgctcatcgcc 94937 Query: 469 atgagctaccttaccaaagccaagcccggagccttcctggtgtgcaatggctacaaggac 528 ||||||| ||| |||| |||||||||||||| | |||||| |||||||||||||||||| Sbjct: 94938 atgagctgcctcgccaaggccaagcccggagcttacctggtctgcaatggctacaaggac 94997 Query: 529 gcggagtatgtggcgctggcgctctcggcgcgtgccatgggcctcaatgtcatcatcgtg 588 || || || || ||||| |||||||| ||||| |||||||||||||| | |||||||||| Sbjct: 94998 gccgactacgtcgcgctcgcgctctccgcgcgcgccatgggcctcaacgccatcatcgtg 95057 Query: 589 ttggagatggaggaggagctggacatcgtcatcgaccagagcaacaagctcggggtggag 648 ||||||||||||||||||| ||||||||| |||| |||||| || |||||| || ||| Sbjct: 95058 ctggagatggaggaggagctcgacatcgtcgtcgagcagagcgccaggctcggcgtcgag 95117 Query: 649 ccggtgctgggcgtgcgtgccaagcttctcaccaagattccaggccacttcgggtcgact 708 ||||| | ||||| || ||||||||||||||||||||||| || |||||||| || || Sbjct: 95118 ccggtcatcggcgtccgcgccaagcttctcaccaagattccgggacacttcggctccacg 95177 Query: 709 gccggcaagcacggcaagttcggcctgctcgcggagaagatctacgaggtggcc 762 ||||||||||||||||||||||| ||||||| || |||||||||||||||||| Sbjct: 95178 gccggcaagcacggcaagttcgggatgctcgccgacaagatctacgaggtggcc 95231 Score = 297 bits (150), Expect = 8e-77 Identities = 328/386 (84%), Gaps = 6/386 (1%) Strand = Plus / Plus Query: 784 aagctgcactggctcaagctgctacacttccacatcggctccatgatcccgaccacggac 843 |||||||||||||| |||||||| |||| ||| |||||||||||||||||||||| ||| Sbjct: 95253 aagctgcactggctgaagctgctgcactaccatgtcggctccatgatcccgaccaccgac 95312 Query: 844 attgtgtccaatgcagccagggaggcctccggcatctactgcactctggtgaaccagtat 903 || |||| ||| || || |||||| | || ||||||||| | |||||||| || | Sbjct: 95313 atcgtgtacaacgcggcggccgaggccgcaggaatctactgcgcgctggtgaaggagcac 95372 Query: 904 ggtgcgcag---atgaccacgctggactgcggcggagggctcggcgtcgactacgacggc 960 || ||| | ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 95373 ggcgcgacggggatgaccacgctggactgcggcggcgggctcggcgtcgactacgacggg 95432 Query: 961 acccggtcaggtagctccgacatgtcggtggcatatgggttggaggagtatgcgtccagc 1020 || ||||| || |||||||||||||||||||| || ||| | ||| |||| ||||||||| Sbjct: 95433 acgcggtcgggcagctccgacatgtcggtggcgtacgggctcgagcagtacgcgtccagc 95492 Query: 1021 attgtgcaggcggtgcggctcacgtgcgagtacaatggtggcgttccccaccctgttttg 1080 || |||||||||||||||||||||||||| |||| |||||| |||||||| || | Sbjct: 95493 atcgtgcaggcggtgcggctcacgtgcgacgacaa---tggcgtcccccacccggtgctc 95549 Query: 1081 tgcaccgagagcggccgcgccatggtgtcgcatcactcgatgatcatcctcgaggccctc 1140 ||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| ||| Sbjct: 95550 tgcaccgagagcggccgcgccatggcgtcgcaccactccatgatcatcctcgaggcgctc 95609 Query: 1141 tcggcgatccctgagcccaaggacga 1166 ||||||||||| ||||| ||||||| Sbjct: 95610 tcggcgatcccggagccgcaggacga 95635 Score = 234 bits (118), Expect = 1e-57 Identities = 211/242 (87%) Strand = Plus / Plus Query: 1274 agaagcacgggatcgagatgtacaagctggccaagaagctctccaagcggatcgccgggg 1333 ||||||||||||||||||||||||||||||| |||||||| |||||| || | |||| | Sbjct: 95761 agaagcacgggatcgagatgtacaagctggcgaagaagctgtccaagagggtgaccggcg 95820 Query: 1334 acgccaacaccatctacaactaccacatgaacctctccatcttctcgctcgttcccgact 1393 |||||||| |||||||||||||||||||||||||||| ||||||| ||||| ||||||| Sbjct: 95821 acgccaacggcatctacaactaccacatgaacctctccgtcttctccctcgtccccgact 95880 Query: 1394 tctggggcatcaagcacctcttcccgatgatgcccgcgagccggctcaacgagaagccga 1453 ||||||||||| || ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 95881 tctggggcatcggccagctcttcccgatgatgccggtgagccggctgaacgagaagccga 95940 Query: 1454 ctcaaatgggcacgctcatcgacatcacatgcgacagcgacggaaaggttgacaagttca 1513 | | |||||||| |||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 95941 ccatcaacggcacgctggtcgacatcacctgcgacagcgacggcaaggtagagaagttca 96000 Query: 1514 tc 1515 || Sbjct: 96001 tc 96002 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 240 ccagtttccgatgatcctccgcttccccggcgtgctcaagcaccgcgtcgactcgctcca 299 |||||| |||||||||||||||||||||| |||||||||| ||||| ||||||| ||||| Sbjct: 94709 ccagttcccgatgatcctccgcttccccgacgtgctcaagaaccgcctcgactccctcca 94768 Query: 300 cg 301 || Sbjct: 94769 cg 94770 Score = 67.9 bits (34), Expect = 1e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 79 aagaactacggtgaattgtacaacatcctcggctggggtgaaccttacttcatcgtgaac 138 |||||||||||| || |||||||||||||||| ||||| || || ||||||| ||||||| Sbjct: 94521 aagaactacggtcaagtgtacaacatcctcgggtggggcgacccctacttcaccgtgaac 94580 Query: 139 acggatggccacct 152 | |||||||||| Sbjct: 94581 tcccatggccacct 94594 Score = 42.1 bits (21), Expect = 7.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1530 gctgtccggcgcgtaccaggaagccctttcttgcaagcataacctgttc 1578 |||||| || ||||||||||| ||||| | |||||||| ||||||||| Sbjct: 96080 gctgtcgggggcgtaccaggaggccctggcgtgcaagcacaacctgttc 96128
>gb|AY110562.1| Zea mays CL26590_1 mRNA sequence Length = 820 Score = 188 bits (95), Expect = 5e-44 Identities = 191/223 (85%) Strand = Plus / Minus Query: 1274 agaagcacgggatcgagatgtacaagctggccaagaagctctccaagcggatcgccgggg 1333 |||||||||| ||||||||||||||||| | |||||||||| |||| || ||| || | Sbjct: 817 agaagcacggcatcgagatgtacaagcttggcaagaagctcggcaagagggtcgtcgccg 758 Query: 1334 acgccaacaccatctacaactaccacatgaacctctccatcttctcgctcgttcccgact 1393 | ||||||||| |||| ||||||||||||||||||||| |||||||||| || || |||| Sbjct: 757 atgccaacaccgtctataactaccacatgaacctctccgtcttctcgctggtgcctgact 698 Query: 1394 tctggggcatcaagcacctcttcccgatgatgcccgcgagccggctcaacgagaagccga 1453 ||||||||||| ||| ||||||||||||||||| | |||||| ||||||||| |||||| Sbjct: 697 tctggggcatcgggcagctcttcccgatgatgccggtgagccgcctcaacgaggagccga 638 Query: 1454 ctcaaatgggcacgctcatcgacatcacatgcgacagcgacgg 1496 ||| | ||||||||| | |||||||| |||||||| ||||| Sbjct: 637 ctctcaagggcacgctggtggacatcacctgcgacagtgacgg 595 Score = 46.1 bits (23), Expect = 0.50 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1790 ccatgccctacctcgtcgaatacaaggtccc 1820 |||||||||||||| ||||||||||||||| Sbjct: 229 ccatgccctacctcaacgaatacaaggtccc 199 Score = 46.1 bits (23), Expect = 0.50 Identities = 47/55 (85%) Strand = Plus / Minus Query: 1534 tccggcgcgtaccaggaagccctttcttgcaagcataacctgttcggcggcccaa 1588 ||||| ||||||||||| ||| || || ||||||| ||||||||| | ||||||| Sbjct: 503 tccggggcgtaccaggaggccattgctggcaagcacaacctgttcagtggcccaa 449
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 52.0 bits (26), Expect = 0.008 Identities = 32/34 (94%) Strand = Plus / Minus Query: 931 ggcggagggctcggcgtcgactacgacggcaccc 964 ||||| || ||||||||||||||||||||||||| Sbjct: 5703066 ggcggtggcctcggcgtcgactacgacggcaccc 5703033 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 729 cggcctgctcgcggagaagatc 750 |||||||||||||||||||||| Sbjct: 3667362 cggcctgctcgcggagaagatc 3667383
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 52.0 bits (26), Expect = 0.008 Identities = 32/34 (94%) Strand = Plus / Minus Query: 931 ggcggagggctcggcgtcgactacgacggcaccc 964 ||||| || ||||||||||||||||||||||||| Sbjct: 5432415 ggcggcggcctcggcgtcgactacgacggcaccc 5432382 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 729 cggcctgctcgcggagaagatc 750 |||||||||||||||||||||| Sbjct: 1967316 cggcctgctcgcggagaagatc 1967295
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 50.1 bits (25), Expect = 0.032 Identities = 40/45 (88%) Strand = Plus / Plus Query: 1472 tcgacatcacatgcgacagcgacggaaaggttgacaagttcatcg 1516 |||||||||| |||||||||||||| ||| | || |||||||||| Sbjct: 1888176 tcgacatcacctgcgacagcgacggcaagatcgagaagttcatcg 1888220
>gb|AC093704.1| Gallus gallus clone WAG-38H9, complete sequence Length = 89724 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 589 ttggagatggaggaggagctggac 612 |||||||||||||||||||||||| Sbjct: 25579 ttggagatggaggaggagctggac 25556
>gb|AC154317.2| Mus musculus BAC clone RP23-346H4 from chromosome 13, complete sequence Length = 205164 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1744 gaggtgtgggagaaggtgggggtg 1767 |||||||||||||||||||||||| Sbjct: 3918 gaggtgtgggagaaggtgggggtg 3895
>gb|AF045683.1|AF045683 Brassica oleracea isolate ADC-O arginine decarboxylase (spe2) gene, partial cds Length = 1205 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1483 tgcgacagcgacggaaaggttgacaagttcat 1514 |||||||||||||| ||| ||||||||||||| Sbjct: 1174 tgcgacagcgacgggaagattgacaagttcat 1205
>gb|AF045682.1|AF045682 Brassica nigra isolate ADC-O arginine decarboxylase (spe2) gene, partial cds Length = 1205 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1483 tgcgacagcgacggaaaggttgacaagttcat 1514 |||||||||||||| ||| ||||||||||||| Sbjct: 1174 tgcgacagcgacgggaagattgacaagttcat 1205
>gb|AC154662.2| Mus musculus BAC clone RP24-279F20 from chromosome 13, complete sequence Length = 170831 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1744 gaggtgtgggagaaggtgggggtg 1767 |||||||||||||||||||||||| Sbjct: 135782 gaggtgtgggagaaggtgggggtg 135759
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 46.1 bits (23), Expect = 0.50 Identities = 32/35 (91%) Strand = Plus / Plus Query: 930 cggcggagggctcggcgtcgactacgacggcaccc 964 |||||| || || |||||||||||||||||||||| Sbjct: 5050317 cggcggcggtctgggcgtcgactacgacggcaccc 5050351
>dbj|AP006639.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT25N16, TM0216, complete sequence Length = 95667 Score = 46.1 bits (23), Expect = 0.50 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1483 tgcgacagcgacggaaaggttgacaagttcatcgg 1517 |||||||| ||||| ||| |||||||||||||||| Sbjct: 62331 tgcgacagtgacgggaagattgacaagttcatcgg 62365
>emb|X86030.1|VURNEXT26 V.unguiculata mRNA for extensine-like protein, ext26 Length = 710 Score = 46.1 bits (23), Expect = 0.50 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1737 ggagaaggaggtgtgggagaaggtgggggtg 1767 |||| |||||||| ||||||||||||||||| Sbjct: 209 ggaggaggaggtgagggagaaggtgggggtg 179
>emb|X91836.1|VUEXT26GN V.unguiculata Ext26G gene Length = 3609 Score = 46.1 bits (23), Expect = 0.50 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1737 ggagaaggaggtgtgggagaaggtgggggtg 1767 |||| |||||||| ||||||||||||||||| Sbjct: 2945 ggaggaggaggtgagggagaaggtgggggtg 2915
>ref|XM_001188048.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC576113 (LOC576113), mRNA Length = 2409 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 663 gcgtgccaagcttctcaccaag 684 |||||||||||||||||||||| Sbjct: 707 gcgtgccaagcttctcaccaag 728
>ref|NM_001063230.1| Oryza sativa (japonica cultivar-group) Os06g0131300 (Os06g0131300) mRNA, complete cds Length = 2434 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1081 tgcaccgagagcggccgcgccatggtgtcgcatcactc 1118 |||| ||||||||||||||| |||||||||| ||||| Sbjct: 1180 tgcagcgagagcggccgcgcgctggtgtcgcaccactc 1217 Score = 44.1 bits (22), Expect = 2.0 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1473 cgacatcacatgcgacagcgacggaaaggttgacaagttcatcggc 1518 |||| |||| |||||||||||||| ||||| ||| | ||||||||| Sbjct: 1626 cgacctcacctgcgacagcgacggcaaggtcgaccacttcatcggc 1671 Score = 42.1 bits (21), Expect = 7.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 791 actggctcaagctgctacacttccacatcggctccatgatcccgaccac 839 |||| ||| |||| || ||||||||||| |||||| |||||||||||| Sbjct: 896 actgcctccagctcctgcacttccacattggctcccagatcccgaccac 944
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 943 ggcgtcgactacgacggcaccc 964 |||||||||||||||||||||| Sbjct: 5152972 ggcgtcgactacgacggcaccc 5152951
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 943 ggcgtcgactacgacggcacccggtc 968 |||||||||||||| ||||||||||| Sbjct: 603684 ggcgtcgactacgaaggcacccggtc 603659
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1473 cgacatcacatgcgacagcgacggaaaggt 1502 ||||||||| |||||||||||||| ||||| Sbjct: 621386 cgacatcacctgcgacagcgacggcaaggt 621357
>ref|XM_655281.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2769.2), mRNA Length = 1767 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 776 gtctcaacaagctgcactggctcaagctgc 805 ||||||||||||||| ||||||||||||| Sbjct: 1077 gtctcaacaagctgccatggctcaagctgc 1106
>ref|XM_504926.1| Yarrowia lipolytica CLIB122, YALI0F02937g predicted mRNA Length = 1230 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 770 tccagggtctcaacaagctgca 791 |||||||||||||||||||||| Sbjct: 656 tccagggtctcaacaagctgca 677
>gb|AY604047.1| Oryza sativa (japonica cultivar-group) arginine decarboxylase (ADC1) mRNA, complete cds Length = 2451 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1081 tgcaccgagagcggccgcgccatggtgtcgcatcactc 1118 |||| ||||||||||||||| |||||||||| ||||| Sbjct: 1180 tgcagcgagagcggccgcgcgctggtgtcgcaccactc 1217 Score = 44.1 bits (22), Expect = 2.0 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1473 cgacatcacatgcgacagcgacggaaaggttgacaagttcatcggc 1518 |||| |||| |||||||||||||| ||||| ||| | ||||||||| Sbjct: 1626 cgacctcacctgcgacagcgacggcaaggtcgaccacttcatcggc 1671 Score = 42.1 bits (21), Expect = 7.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 791 actggctcaagctgctacacttccacatcggctccatgatcccgaccac 839 |||| ||| |||| || ||||||||||| |||||| |||||||||||| Sbjct: 896 actgcctccagctcctgcacttccacattggctcccagatcccgaccac 944
>ref|XM_776455.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC576113 (LOC576113), mRNA Length = 2409 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 663 gcgtgccaagcttctcaccaag 684 |||||||||||||||||||||| Sbjct: 707 gcgtgccaagcttctcaccaag 728
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 2.0 Identities = 40/46 (86%) Strand = Plus / Minus Query: 1473 cgacatcacatgcgacagcgacggaaaggttgacaagttcatcggc 1518 |||| |||| |||||||||||||| ||||| ||| | ||||||||| Sbjct: 1674158 cgacctcacctgcgacagcgacggcaaggtcgaccacttcatcggc 1674113 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1081 tgcaccgagagcggccgcgccatggtgtcgcatcactc 1118 |||| ||||||||||||||| |||||||||| ||||| Sbjct: 1674604 tgcagcgagagcggccgcgcgctggtgtcgcaccactc 1674567 Score = 42.1 bits (21), Expect = 7.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 791 actggctcaagctgctacacttccacatcggctccatgatcccgaccac 839 |||| ||| |||| || ||||||||||| |||||| |||||||||||| Sbjct: 1674888 actgcctccagctcctgcacttccacattggctcccagatcccgaccac 1674840
>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0493C11 Length = 143113 Score = 44.1 bits (22), Expect = 2.0 Identities = 40/46 (86%) Strand = Plus / Minus Query: 1473 cgacatcacatgcgacagcgacggaaaggttgacaagttcatcggc 1518 |||| |||| |||||||||||||| ||||| ||| | ||||||||| Sbjct: 77329 cgacctcacctgcgacagcgacggcaaggtcgaccacttcatcggc 77284 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1081 tgcaccgagagcggccgcgccatggtgtcgcatcactc 1118 |||| ||||||||||||||| |||||||||| ||||| Sbjct: 77775 tgcagcgagagcggccgcgcgctggtgtcgcaccactc 77738 Score = 42.1 bits (21), Expect = 7.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 791 actggctcaagctgctacacttccacatcggctccatgatcccgaccac 839 |||| ||| |||| || ||||||||||| |||||| |||||||||||| Sbjct: 78059 actgcctccagctcctgcacttccacattggctcccagatcccgaccac 78011
>ref|XM_954296.1| Neurospora crassa OR74A hypothetical protein (NCU04941.1) partial mRNA Length = 1188 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 tggagatggaggaggagctgga 611 |||||||||||||||||||||| Sbjct: 869 tggagatggaggaggagctgga 890
>emb|CR406924.1| Gallus gallus finished cDNA, clone ChEST152i8 Length = 598 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1737 ggagaaggaggtgtgggagaaggtgg 1762 ||||||||||||| |||||||||||| Sbjct: 467 ggagaaggaggtgcgggagaaggtgg 492
>ref|NM_204938.1| Gallus gallus apolipoprotein A-IV (APOA4), mRNA emb|Y16534.1|GGA16534 Gallus gallus mRNA for apolipoprotein AIV Length = 1199 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1737 ggagaaggaggtgtgggagaaggtgg 1762 ||||||||||||| |||||||||||| Sbjct: 1074 ggagaaggaggtgcgggagaaggtgg 1099
>gb|AC171017.3| Gallus gallus BAC clone CH261-1F11 from chromosome ul, complete sequence Length = 189284 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1737 ggagaaggaggtgtgggagaaggtgg 1762 ||||||||||||| |||||||||||| Sbjct: 40189 ggagaaggaggtgcgggagaaggtgg 40214
>gb|U35367.1|GMU35367 Glycine max arginine decarboxylase mRNA, complete cds Length = 2783 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1486 gacagcgacggaaaggttgacaagttcatc 1515 ||||||||||| ||| |||||||||||||| Sbjct: 1990 gacagcgacgggaagattgacaagttcatc 2019
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 770 tccagggtctcaacaagctgca 791 |||||||||||||||||||||| Sbjct: 415063 tccagggtctcaacaagctgca 415042
>gb|CP000471.1| Magnetococcus sp. MC-1, complete genome Length = 4719581 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1182 gctgcacagcaagatccagca 1202 ||||||||||||||||||||| Sbjct: 1285029 gctgcacagcaagatccagca 1285049
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 42.1 bits (21), Expect = 7.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 518 gctacaaggacgcggagtatgtggcgctg 546 |||||||||| ||||| |||||||||||| Sbjct: 8228669 gctacaaggatgcggattatgtggcgctg 8228697
>ref|NM_001055577.1| Oryza sativa (japonica cultivar-group) Os03g0161200 (Os03g0161200) mRNA, complete cds Length = 2325 Score = 42.1 bits (21), Expect = 7.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 263 tccccggcgtgctcaagcaccgcgtcgactcgc 295 |||||||||||||| || |||||||||||||| Sbjct: 1662 tccccggcgtgctcgtgctccgcgtcgactcgc 1694
>gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome Length = 3705021 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 968 caggtagctccgacatgtcgg 988 ||||||||||||||||||||| Sbjct: 2561240 caggtagctccgacatgtcgg 2561220
>ref|XR_024196.1| PREDICTED: Pan troglodytes hypothetical LOC471343 (LOC471343), mRNA Length = 6082 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1958 atgctttgccattttctattgaaga 1982 |||||||| |||||||||||||||| Sbjct: 2097 atgctttgtcattttctattgaaga 2121
>ref|XM_001082147.1| PREDICTED: Macaca mulatta similar to C28H8.3 (LOC693567), mRNA Length = 6063 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1958 atgctttgccattttctattgaaga 1982 |||||||| |||||||||||||||| Sbjct: 2109 atgctttgtcattttctattgaaga 2133
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1735 agggagaaggaggtgtgggagaagg 1759 ||||||||||||||| ||||||||| Sbjct: 996668 agggagaaggaggtgcgggagaagg 996692
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11, complete sequence Length = 112065 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1613 ccgacggtggtggtggcttcc 1633 ||||||||||||||||||||| Sbjct: 58002 ccgacggtggtggtggcttcc 58022
>ref|XM_883359.1| PREDICTED: Bos taurus hypothetical protein LOC618541 (LOC618541), mRNA Length = 1541 Score = 42.1 bits (21), Expect = 7.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1750 tgggagaaggtgggggtgttcgtggaggc 1778 |||||||||||||||| |||| ||||||| Sbjct: 472 tgggagaaggtgggggcgttcctggaggc 500
>gb|AC118934.9| Mus musculus chromosome 19, clone RP24-172J14, complete sequence Length = 152728 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 cacacaacacattcccacaaccaaa 29 |||||||||||||| |||||||||| Sbjct: 59833 cacacaacacattcacacaaccaaa 59809
>gb|AC133156.7| Mus musculus chromosome 15, clone RP24-291M22, complete sequence Length = 151577 Score = 42.1 bits (21), Expect = 7.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1737 ggagaaggaggtgtgggagaaggtggggg 1765 ||||||||||| ||||||| ||||||||| Sbjct: 104601 ggagaaggaggagtgggaggaggtggggg 104573
>gb|AC125565.5| Rattus norvegicus 2 BAC CH230-9H16 (Children's Hospital Oakland Research Institute) complete sequence Length = 217080 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 592 gagatggaggaggagctggac 612 ||||||||||||||||||||| Sbjct: 139983 gagatggaggaggagctggac 140003
>dbj|AK001649.1| Homo sapiens cDNA FLJ10787 fis, clone NT2RP4000481, weakly similar to ATP-DEPENDENT RNA HELICASE DOB1 Length = 3689 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1958 atgctttgccattttctattgaaga 1982 |||||||| |||||||||||||||| Sbjct: 1973 atgctttgtcattttctattgaaga 1997
>ref|XM_823797.1| Trypanosoma brucei TREU927 dynein heavy chain (Tb11.01.0390) partial mRNA Length = 12459 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1460 tgggcacgctcatcgacatca 1480 ||||||||||||||||||||| Sbjct: 893 tgggcacgctcatcgacatca 873
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1085 ccgagagcggccgcgccatgg 1105 ||||||||||||||||||||| Sbjct: 149567 ccgagagcggccgcgccatgg 149547 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 930 cggcggagggctcggcgtcga 950 ||||||||||||||||||||| Sbjct: 647808 cggcggagggctcggcgtcga 647828
>ref|NM_017631.3| Homo sapiens hypothetical protein FLJ20035 (FLJ20035), mRNA gb|BC038115.2| Homo sapiens hypothetical protein FLJ20035, mRNA (cDNA clone MGC:43125 IMAGE:5261001), complete cds Length = 6031 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1958 atgctttgccattttctattgaaga 1982 |||||||| |||||||||||||||| Sbjct: 2042 atgctttgtcattttctattgaaga 2066
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 42.1 bits (21), Expect = 7.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 263 tccccggcgtgctcaagcaccgcgtcgactcgc 295 |||||||||||||| || |||||||||||||| Sbjct: 175411 tccccggcgtgctcgtgctccgcgtcgactcgc 175443
>gb|AC132139.4| Mus musculus BAC clone RP23-181A24 from chromosome 10, complete sequence Length = 206712 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 758 tggccaagaagctccagggtc 778 ||||||||||||||||||||| Sbjct: 85904 tggccaagaagctccagggtc 85924
>gb|AC068989.36| Homo sapiens 4 BAC RP11-662D13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 197484 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1958 atgctttgccattttctattgaaga 1982 |||||||| |||||||||||||||| Sbjct: 90297 atgctttgtcattttctattgaaga 90321
>gb|BC112446.1| Bos taurus cDNA clone IMAGE:8049149 Length = 2281 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1736 gggagaaggaggtgtgggaga 1756 ||||||||||||||||||||| Sbjct: 1378 gggagaaggaggtgtgggaga 1358
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 719 acggcaagttcggcctgctcgcgga 743 ||||||||||||||||||| ||||| Sbjct: 231066 acggcaagttcggcctgcttgcgga 231042
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1613 ccgacggtggtggtggcttcc 1633 ||||||||||||||||||||| Sbjct: 25954875 ccgacggtggtggtggcttcc 25954895
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 7.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 263 tccccggcgtgctcaagcaccgcgtcgactcgc 295 |||||||||||||| || |||||||||||||| Sbjct: 3253913 tccccggcgtgctcgtgctccgcgtcgactcgc 3253881
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 42.1 bits (21), Expect = 7.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 263 tccccggcgtgctcaagcaccgcgtcgactcgc 295 |||||||||||||| || |||||||||||||| Sbjct: 78675 tccccggcgtgctcgtgctccgcgtcgactcgc 78643
>ref|XM_571648.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNF03370) partial mRNA Length = 4415 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1735 agggagaaggaggtgtgggagaagg 1759 ||||||||||||||| ||||||||| Sbjct: 2140 agggagaaggaggtgcgggagaagg 2164
>dbj|AK066932.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093F02, full insert sequence Length = 2327 Score = 42.1 bits (21), Expect = 7.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 263 tccccggcgtgctcaagcaccgcgtcgactcgc 295 |||||||||||||| || |||||||||||||| Sbjct: 1664 tccccggcgtgctcgtgctccgcgtcgactcgc 1696
>gb|AY105387.1| Zea mays PCO062493 mRNA sequence Length = 1009 Score = 42.1 bits (21), Expect = 7.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 803 tgctacacttccacatcggctccatgatcccgaccac 839 |||| ||| |||||||||||||| |||||||||||| Sbjct: 105 tgctgcacatccacatcggctcctagatcccgaccac 141 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 296,491,901 Number of extensions: 15595033 Number of successful extensions: 88380 Number of sequences better than 10.0: 65 Number of HSP's gapped: 88366 Number of HSP's successfully gapped: 134 Length of query: 2044 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2021 Effective length of database: 18,503,978,556 Effective search space: 37396540661676 Effective search space used: 37396540661676 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
