ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf173e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9M015:Y5161_ARATH Uncharacterized protein At5g01610 - Arabidops... 33 0.89
2O52064:DNAK_PASHA Chaperone protein dnaK - Pasteurella haemolyti... 31 4.4
3P29102:LEU3_BRANA 3-isopropylmalate dehydrogenase, chloroplast p... 30 5.8
4Q6LUA7:DNAK1_PHOPR Chaperone protein dnaK 1 - Photobacterium pro... 30 7.6
5P76576:YFGM_ECOLI UPF0070 protein yfgM - Escherichia coli 30 9.9
6Q6LS31:DNAK2_PHOPR Chaperone protein dnaK 2 - Photobacterium pro... 30 9.9

>Q9M015:Y5161_ARATH Uncharacterized protein At5g01610 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 170
 Score = 33.1 bits (74), Expect = 0.89
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +1

Query: 304 NQTVSYDTVVTAFVEKGKIKNVTGVKIEELSLVEVFVDESSADKVTIKTDAGLSDTHDA 480
           +  + + T VT  +EKGK+ +V G+K + +  V+V    + A KV        S + DA
Sbjct: 99  SSVLKFTTTVTGHLEKGKLTDVEGIKTKVMIWVKVTSISTDASKVYFTAGMKKSRSRDA 157



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>O52064:DNAK_PASHA Chaperone protein dnaK - Pasteurella haemolytica (Mannheimia|
           haemolytica)
          Length = 631

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 25/65 (38%), Positives = 32/65 (49%)
 Frame = +1

Query: 367 VTGVKIEELSLVEVFVDESSADKVTIKTDAGLSDTHDASVFALGE*GPTSQKVQKNKVRE 546
           VT  K+E  SLVE  V+ S     T   DAGLS      V  +G  G T   + + KV +
Sbjct: 298 VTRAKLE--SLVEDLVNRSLEPLKTALADAGLSVGDINDVILVG--GQTRMPLVQKKVAD 353

Query: 547 WFGTT 561
           +FG T
Sbjct: 354 FFGKT 358



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>P29102:LEU3_BRANA 3-isopropylmalate dehydrogenase, chloroplast precursor - Brassica|
           napus (Rape)
          Length = 406

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +1

Query: 97  RLVESHRAGAEVLKGDDICKKKCVXXXXXXGLPKGLFPMDDIEEVGYNHE 246
           +LV++     EV +G D+   + +      G+P+G+   ++ EEVGYN E
Sbjct: 154 QLVDASTLKREVAEGVDLMVVRELTGGIYFGVPRGIKTNENGEEVGYNTE 203



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>Q6LUA7:DNAK1_PHOPR Chaperone protein dnaK 1 - Photobacterium profundum (Photobacterium|
           sp. (strain SS9))
          Length = 639

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 23/63 (36%), Positives = 31/63 (49%)
 Frame = +1

Query: 367 VTGVKIEELSLVEVFVDESSADKVTIKTDAGLSDTHDASVFALGE*GPTSQKVQKNKVRE 546
           VT  K+E  SLVE  V  S        +DAGLS +    +  +G  G T   + + KV E
Sbjct: 300 VTRAKLE--SLVEDLVQRSLEPLKVALSDAGLSVSEITDIIVVG--GQTRMPMVQAKVAE 355

Query: 547 WFG 555
           +FG
Sbjct: 356 FFG 358



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>P76576:YFGM_ECOLI UPF0070 protein yfgM - Escherichia coli|
          Length = 206

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +1

Query: 322 DTVVTAFVEKGKIKNVTGVKIEELSLVEVFVDESSADKVTIKTDAGLSDTHDASVFAL 495
           D++  A     + KN  G  +  L L + FVD++  +K   +   GL+DT D ++ A+
Sbjct: 70  DSIPAAEKFAAENKNTYGA-LASLELAQQFVDKNELEKAAAQLQQGLADTSDENLKAV 126



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>Q6LS31:DNAK2_PHOPR Chaperone protein dnaK 2 - Photobacterium profundum (Photobacterium|
           sp. (strain SS9))
          Length = 641

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 26/75 (34%), Positives = 33/75 (44%)
 Frame = +1

Query: 331 VTAFVEKGKIKNVTGVKIEELSLVEVFVDESSADKVTIKTDAGLSDTHDASVFALGE*GP 510
           VTA     K  NV   + +  SLVE  V  +        TDA LS T    V  +G  G 
Sbjct: 286 VTADAAGPKHMNVKVTRAKLESLVEDLVQRTLEPLKIALTDANLSITDITDVILVG--GQ 343

Query: 511 TSQKVQKNKVREWFG 555
           T   + + KV E+FG
Sbjct: 344 TRMPMVQAKVTEFFG 358


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 100,737,257
Number of extensions: 2089943
Number of successful extensions: 5357
Number of sequences better than 10.0: 6
Number of HSP's gapped: 5357
Number of HSP's successfully gapped: 6
Length of query: 213
Length of database: 100,686,439
Length adjustment: 108
Effective length of query: 105
Effective length of database: 71,062,579
Effective search space: 7461570795
Effective search space used: 7461570795
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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