| Clone Name | FLbaf173e02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ244630.1| Zea mays clone 9730 mRNA sequence Length = 654 Score = 605 bits (305), Expect = e-170 Identities = 477/532 (89%), Gaps = 3/532 (0%) Strand = Plus / Plus Query: 86 aaatggcgtcccggctggtcgagagccaccgcgccggcgccgaggtgctcaagggggacg 145 |||||||||||| ||| ||||||||||||||| |||| |||||||| | ||||||| ||| Sbjct: 55 aaatggcgtcccagcttgtcgagagccaccgccccggtgccgaggtccacaaggggaacg 114 Query: 146 atatctgcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctct 205 ||||||||||||||||| || |||||||| |||||||| ||||||||||| ||||||| Sbjct: 115 atatctgcaagaagaagacggttgagcttctcgaagagctcggcctcccgaaaggcctct 174 Query: 206 ttcctatggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatag 265 |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 175 ttcctatggatgacatcgaggaggtcgggcacaactgtgagagtgggttcgtgtggatac 234 Query: 266 ttcagaagaataagaaaaagcacaccttcaagaagatcaaccagaccgtctcctacgaca 325 |||||||||| ||| | ||||||| ||||| ||| |||||||||||||||||||||||| Sbjct: 235 ttcagaagaagaagctagagcacacgttcaacaagctcaaccagaccgtctcctacgaca 294 Query: 326 ctgtggtgaccgcttttgtggagaagggcaagattaagaacgtcaccggagttaagattg 385 ||| |||||||||||||||||| ||||||||||| ||||| |||||||| || ||||| | Sbjct: 295 ctgaggtgaccgcttttgtggaaaagggcaagatgaagaaggtcaccggggtcaagatcg 354 Query: 386 aggagttgtctttggtcgaggtctttgtggatgagtcttctgctgataaggtcaccatca 445 |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 355 aggacatgtctttggtcgaggtctatgtggatgagtcttctgctgataaggttaccatca 414 Query: 446 agaccgacgctggtctctctgacacccatgatgcgtccgtgttcgctctcggagaatagg 505 ||||| || | ||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 415 agaccaacaccggtctgtctgacacccatgatgcggccgtgttcgctctcggagaatagg 474 Query: 506 gacctactagtcagaaagtccagaagaataaagtgagagaatggttcggcactacaattc 565 || |||||| | | |||| ||||||||||||||| |||||||||||||||| || ||| Sbjct: 475 gagctactatttacaaaggccagaagaataaagt--cagaatggttcggcactgcagttc 532 Query: 566 acatgttatgcagaagtatatg-ttccgttttctttgtaatccaataaaggc 616 | |||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 533 aaatgttatgcagaagtatatgtttccgttttctttgtaatctaataaaggc 584 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 8 ttcaacaagctcatctaccaaaccaacaaacta 40 ||||||||||||||||||||| ||| ||||||| Sbjct: 3 ttcaacaagctcatctaccaatccagcaaacta 35
>ref|NM_001065312.1| Oryza sativa (japonica cultivar-group) Os07g0120300 (Os07g0120300) mRNA, complete cds Length = 435 Score = 107 bits (54), Expect = 5e-20 Identities = 179/220 (81%), Gaps = 3/220 (1%) Strand = Plus / Plus Query: 106 gagagccaccgcgccggcgccgaggtgctcaagggggacgatatctgcaagaagaagtgc 165 |||||||||||| ||||||| ||| | |||| || || | ||||||| ||| |||| | Sbjct: 16 gagagccaccgctccggcgcggagatcatcaatggagatgccatctgcaggaacaagtcc 75 Query: 166 gtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatggacgacatcgag 225 | ||||| || ||||| ||||||||||| ||||||||| | || |||| ||||||||| Sbjct: 76 attgagctgctggaagaacttggcctccccaagggcctcctgccattggaggacatcgag 135 Query: 226 gaggtcgggtacaaccatgagagtgggttcgtgtggatagttcagaagaataagaaaa-- 283 ||| |||| ||||||| || | ||||||| ||||| | || |||| ||| ||||| | Sbjct: 136 gagttcggctacaaccgggacactgggttcatgtggctggtgcagaggaagaagaagatc 195 Query: 284 -agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||||||||||||||||||||| |||||||||||||||| Sbjct: 196 gagcacaccttcaagaagatcaagcagaccgtctcctacg 235
>ref|NM_001065310.1| Oryza sativa (japonica cultivar-group) Os07g0120100 (Os07g0120100) mRNA, complete cds Length = 638 Score = 107 bits (54), Expect = 5e-20 Identities = 146/176 (82%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 148 atctgcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctcttt 207 ||||||| |||||||| | | ||||| || ||||| ||||| ||||| ||||||||| | Sbjct: 134 atctgcaggaagaagtccattgagctgctggaagaacttggtctccccaagggcctcctg 193 Query: 208 cctatggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagtt 267 || |||| |||||||||||| ||||||||||| | || ||||||| ||||| | || Sbjct: 194 ccattggaggacatcgaggagttcgggtacaacagggggactgggttcatgtggttggtg 253 Query: 268 cagaagaataagaaaa---agcacaccttcaagaagatcaaccagaccgtctccta 320 |||||||| ||||||| ||||||| |||||||||||||| |||||||||||||| Sbjct: 254 cagaagaagaagaaaattgagcacacgttcaagaagatcaagcagaccgtctccta 309
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 107 bits (54), Expect = 5e-20 Identities = 146/176 (82%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 148 atctgcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctcttt 207 ||||||| |||||||| | | ||||| || ||||| ||||| ||||| ||||||||| | Sbjct: 1080505 atctgcaggaagaagtccattgagctgctggaagaacttggtctccccaagggcctcctg 1080446 Query: 208 cctatggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagtt 267 || |||| |||||||||||| ||||||||||| | || ||||||| ||||| | || Sbjct: 1080445 ccattggaggacatcgaggagttcgggtacaacagggggactgggttcatgtggttggtg 1080386 Query: 268 cagaagaataagaaaa---agcacaccttcaagaagatcaaccagaccgtctccta 320 |||||||| ||||||| ||||||| |||||||||||||| |||||||||||||| Sbjct: 1080385 cagaagaagaagaaaattgagcacacgttcaagaagatcaagcagaccgtctccta 1080330 Score = 107 bits (54), Expect = 5e-20 Identities = 179/220 (81%), Gaps = 3/220 (1%) Strand = Plus / Minus Query: 106 gagagccaccgcgccggcgccgaggtgctcaagggggacgatatctgcaagaagaagtgc 165 |||||||||||| ||||||| ||| | |||| || || | ||||||| ||| |||| | Sbjct: 1085215 gagagccaccgctccggcgcggagatcatcaatggagatgccatctgcaggaacaagtcc 1085156 Query: 166 gtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatggacgacatcgag 225 | ||||| || ||||| ||||||||||| ||||||||| | || |||| ||||||||| Sbjct: 1085155 attgagctgctggaagaacttggcctccccaagggcctcctgccattggaggacatcgag 1085096 Query: 226 gaggtcgggtacaaccatgagagtgggttcgtgtggatagttcagaagaataagaaaa-- 283 ||| |||| ||||||| || | ||||||| ||||| | || |||| ||| ||||| | Sbjct: 1085095 gagttcggctacaaccgggacactgggttcatgtggctggtgcagaggaagaagaagatc 1085036 Query: 284 -agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||||||||||||||||||||| |||||||||||||||| Sbjct: 1085035 gagcacaccttcaagaagatcaagcagaccgtctcctacg 1084996 Score = 95.6 bits (48), Expect = 2e-16 Identities = 179/222 (80%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 104 tcgagagccaccgcgccggcgccgaggtgctcaagggggacgatatctgcaagaagaagt 163 |||||||||||||||||||||| ||| | |||| || || || ||||||| |||||||| Sbjct: 975334 tcgagagccaccgcgccggcgcggagatcgtcaacggcgatgacatctgcaggaagaagt 975393 Query: 164 gcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatggacgacatcg 223 | |||||||||| | |||||| |||||||| | ||| ||| | || |||| ||||||| Sbjct: 975394 ccatcgagcttctgggagagctcggcctccccatggggctcctgccattggaggacatcg 975453 Query: 224 aggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcagaagaataagaaaa 283 ||||| |||| ||||||| |||| |||||| | ||||| || |||| ||| ||||| | Sbjct: 975454 aggagttcggctacaaccgggagaccgggttcatctggatggtgcagaggaagaagaaga 975513 Query: 284 ---agcacaccttcaagaagatcaaccagaccgtctcctacg 322 ||||| ||||||||||||||| |||| ||| ||||||| Sbjct: 975514 tcgagcacgtcttcaagaagatcaagcagaacgtgtcctacg 975555 Score = 95.6 bits (48), Expect = 2e-16 Identities = 146/178 (82%), Gaps = 3/178 (1%) Strand = Plus / Minus Query: 148 atctgcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctcttt 207 ||||||| |||||||| | | ||||| || ||||| ||||||||||| ||||||||| | Sbjct: 1089035 atctgcaggaagaagtccattgagctgctggaagaacttggcctccccaagggcctcctg 1088976 Query: 208 cctatggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagtt 267 || |||| |||||||||||| |||| |||||| || | ||| ||| ||||||| || Sbjct: 1088975 ccattggaggacatcgaggagttcggctacaacagggacactggattcatgtggatggtg 1088916 Query: 268 cagaagaataagaaaa---agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||| ||| ||||| | |||||||||||||||||||||| |||||||| ||||||| Sbjct: 1088915 cagaggaagaagaagatcgagcacaccttcaagaagatcaagcagaccgtttcctacg 1088858 Score = 87.7 bits (44), Expect = 5e-14 Identities = 178/222 (80%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 104 tcgagagccaccgcgccggcgccgaggtgctcaagggggacgatatctgcaagaagaagt 163 ||||||||||||| |||||||| ||| | ||| || |||| |||||| |||||||| Sbjct: 1066143 tcgagagccaccgtgccggcgcggagattgtcaccggagacggcgtctgcaggaagaagt 1066202 Query: 164 gcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatggacgacatcg 223 | | ||||| || |||||||| |||||||| ||||||||| | || |||| ||||||| Sbjct: 1066203 ccattgagctgctggaagagctgggcctccccaagggcctcctgccattggaggacatcg 1066262 Query: 224 aggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcagaagaataagaaaa 283 ||||| |||| |||||| | || | || ||| ||||| | || |||| ||| ||||| | Sbjct: 1066263 aggagttcggctacaacaaggaaacaggattcatgtggctggtgcagaggaagaagaaga 1066322 Query: 284 ---agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||||||||||||||||||||| |||||||| ||||||| Sbjct: 1066323 tcgagcacaccttcaagaagatcaagcagaccgtgtcctacg 1066364 Score = 79.8 bits (40), Expect = 1e-11 Identities = 112/136 (82%) Strand = Plus / Minus Query: 104 tcgagagccaccgcgccggcgccgaggtgctcaagggggacgatatctgcaagaagaagt 163 |||||||||||||||||||||| ||| | |||| || || || ||||||| |||||||| Sbjct: 1076333 tcgagagccaccgcgccggcgcggagatcgtcaacggcgatgacatctgcaggaagaagt 1076274 Query: 164 gcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatggacgacatcg 223 | |||||||||| | |||||| |||||||| | ||| ||| | || |||| ||||||| Sbjct: 1076273 ccatcgagcttctgggagagctcggcctccccatggggctcctgccattggaggacatcg 1076214 Query: 224 aggaggtcgggtacaa 239 ||||| |||| ||||| Sbjct: 1076213 aggagttcggctacaa 1076198 Score = 79.8 bits (40), Expect = 1e-11 Identities = 138/170 (81%), Gaps = 3/170 (1%) Strand = Plus / Minus Query: 156 gaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatgga 215 |||||||| | ||||||| || || ||||| |||||||| ||||||||| | || |||| Sbjct: 1094619 gaagaagtccatcgagctgctggaggagctcggcctccccaagggcctcctgccattgga 1094560 Query: 216 cgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcagaagaa 275 |||||||||||| | || |||||| | || | || ||| ||||| | || |||| ||| Sbjct: 1094559 ggacatcgaggagtttggctacaacaaggaaacaggattcatgtggctggtgcagaggaa 1094500 Query: 276 taagaaaa---agcacaccttcaagaagatcaaccagaccgtctcctacg 322 ||||| | |||||||||||||||||||||| |||||||||||||||| Sbjct: 1094499 gaagaagatcgagcacaccttcaagaagatcaagcagaccgtctcctacg 1094450 Score = 65.9 bits (33), Expect = 2e-07 Identities = 110/135 (81%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 180 agagcttggcctcccgaagggcctctttcctatggacgacatcgaggaggtcgggtacaa 239 |||||| || ||||| ||||||||| | || |||| |||||||||||| |||| ||||| Sbjct: 972031 agagctcggtctccctaagggcctcctgccattggaggacatcgaggagttcggctacaa 972090 Query: 240 ccatgagagtgggttcgtgtggatagttcagaagaataagaaaa---agcacaccttcaa 296 || || | ||| ||| ||||| | || |||||||| ||||| | ||||||||||||| Sbjct: 972091 ccgggacactggattcatgtggctggtgcagaagaagaagaagatcgagcacaccttcaa 972150 Query: 297 gaagatcaaccagac 311 ||||||||| ||||| Sbjct: 972151 gaagatcaagcagac 972165
>dbj|AK063034.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-C08, full insert sequence Length = 638 Score = 107 bits (54), Expect = 5e-20 Identities = 146/176 (82%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 148 atctgcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctcttt 207 ||||||| |||||||| | | ||||| || ||||| ||||| ||||| ||||||||| | Sbjct: 134 atctgcaggaagaagtccattgagctgctggaagaacttggtctccccaagggcctcctg 193 Query: 208 cctatggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagtt 267 || |||| |||||||||||| ||||||||||| | || ||||||| ||||| | || Sbjct: 194 ccattggaggacatcgaggagttcgggtacaacagggggactgggttcatgtggttggtg 253 Query: 268 cagaagaataagaaaa---agcacaccttcaagaagatcaaccagaccgtctccta 320 |||||||| ||||||| ||||||| |||||||||||||| |||||||||||||| Sbjct: 254 cagaagaagaagaaaattgagcacacgttcaagaagatcaagcagaccgtctccta 309
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 107 bits (54), Expect = 5e-20 Identities = 146/176 (82%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 148 atctgcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctcttt 207 ||||||| |||||||| | | ||||| || ||||| ||||| ||||| ||||||||| | Sbjct: 78093 atctgcaggaagaagtccattgagctgctggaagaacttggtctccccaagggcctcctg 78034 Query: 208 cctatggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagtt 267 || |||| |||||||||||| ||||||||||| | || ||||||| ||||| | || Sbjct: 78033 ccattggaggacatcgaggagttcgggtacaacagggggactgggttcatgtggttggtg 77974 Query: 268 cagaagaataagaaaa---agcacaccttcaagaagatcaaccagaccgtctccta 320 |||||||| ||||||| ||||||| |||||||||||||| |||||||||||||| Sbjct: 77973 cagaagaagaagaaaattgagcacacgttcaagaagatcaagcagaccgtctccta 77918 Score = 107 bits (54), Expect = 5e-20 Identities = 179/220 (81%), Gaps = 3/220 (1%) Strand = Plus / Minus Query: 106 gagagccaccgcgccggcgccgaggtgctcaagggggacgatatctgcaagaagaagtgc 165 |||||||||||| ||||||| ||| | |||| || || | ||||||| ||| |||| | Sbjct: 82803 gagagccaccgctccggcgcggagatcatcaatggagatgccatctgcaggaacaagtcc 82744 Query: 166 gtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatggacgacatcgag 225 | ||||| || ||||| ||||||||||| ||||||||| | || |||| ||||||||| Sbjct: 82743 attgagctgctggaagaacttggcctccccaagggcctcctgccattggaggacatcgag 82684 Query: 226 gaggtcgggtacaaccatgagagtgggttcgtgtggatagttcagaagaataagaaaa-- 283 ||| |||| ||||||| || | ||||||| ||||| | || |||| ||| ||||| | Sbjct: 82683 gagttcggctacaaccgggacactgggttcatgtggctggtgcagaggaagaagaagatc 82624 Query: 284 -agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||||||||||||||||||||| |||||||||||||||| Sbjct: 82623 gagcacaccttcaagaagatcaagcagaccgtctcctacg 82584 Score = 95.6 bits (48), Expect = 2e-16 Identities = 146/178 (82%), Gaps = 3/178 (1%) Strand = Plus / Minus Query: 148 atctgcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctcttt 207 ||||||| |||||||| | | ||||| || ||||| ||||||||||| ||||||||| | Sbjct: 86623 atctgcaggaagaagtccattgagctgctggaagaacttggcctccccaagggcctcctg 86564 Query: 208 cctatggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagtt 267 || |||| |||||||||||| |||| |||||| || | ||| ||| ||||||| || Sbjct: 86563 ccattggaggacatcgaggagttcggctacaacagggacactggattcatgtggatggtg 86504 Query: 268 cagaagaataagaaaa---agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||| ||| ||||| | |||||||||||||||||||||| |||||||| ||||||| Sbjct: 86503 cagaggaagaagaagatcgagcacaccttcaagaagatcaagcagaccgtttcctacg 86446 Score = 87.7 bits (44), Expect = 5e-14 Identities = 178/222 (80%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 104 tcgagagccaccgcgccggcgccgaggtgctcaagggggacgatatctgcaagaagaagt 163 ||||||||||||| |||||||| ||| | ||| || |||| |||||| |||||||| Sbjct: 63731 tcgagagccaccgtgccggcgcggagattgtcaccggagacggcgtctgcaggaagaagt 63790 Query: 164 gcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatggacgacatcg 223 | | ||||| || |||||||| |||||||| ||||||||| | || |||| ||||||| Sbjct: 63791 ccattgagctgctggaagagctgggcctccccaagggcctcctgccattggaggacatcg 63850 Query: 224 aggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcagaagaataagaaaa 283 ||||| |||| |||||| | || | || ||| ||||| | || |||| ||| ||||| | Sbjct: 63851 aggagttcggctacaacaaggaaacaggattcatgtggctggtgcagaggaagaagaaga 63910 Query: 284 ---agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||||||||||||||||||||| |||||||| ||||||| Sbjct: 63911 tcgagcacaccttcaagaagatcaagcagaccgtgtcctacg 63952 Score = 79.8 bits (40), Expect = 1e-11 Identities = 112/136 (82%) Strand = Plus / Minus Query: 104 tcgagagccaccgcgccggcgccgaggtgctcaagggggacgatatctgcaagaagaagt 163 |||||||||||||||||||||| ||| | |||| || || || ||||||| |||||||| Sbjct: 73921 tcgagagccaccgcgccggcgcggagatcgtcaacggcgatgacatctgcaggaagaagt 73862 Query: 164 gcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatggacgacatcg 223 | |||||||||| | |||||| |||||||| | ||| ||| | || |||| ||||||| Sbjct: 73861 ccatcgagcttctgggagagctcggcctccccatggggctcctgccattggaggacatcg 73802 Query: 224 aggaggtcgggtacaa 239 ||||| |||| ||||| Sbjct: 73801 aggagttcggctacaa 73786 Score = 79.8 bits (40), Expect = 1e-11 Identities = 138/170 (81%), Gaps = 3/170 (1%) Strand = Plus / Minus Query: 156 gaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatgga 215 |||||||| | ||||||| || || ||||| |||||||| ||||||||| | || |||| Sbjct: 92207 gaagaagtccatcgagctgctggaggagctcggcctccccaagggcctcctgccattgga 92148 Query: 216 cgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcagaagaa 275 |||||||||||| | || |||||| | || | || ||| ||||| | || |||| ||| Sbjct: 92147 ggacatcgaggagtttggctacaacaaggaaacaggattcatgtggctggtgcagaggaa 92088 Query: 276 taagaaaa---agcacaccttcaagaagatcaaccagaccgtctcctacg 322 ||||| | |||||||||||||||||||||| |||||||||||||||| Sbjct: 92087 gaagaagatcgagcacaccttcaagaagatcaagcagaccgtctcctacg 92038
>ref|NM_001065314.1| Oryza sativa (japonica cultivar-group) Os07g0120500 (Os07g0120500) mRNA, complete cds Length = 429 Score = 95.6 bits (48), Expect = 2e-16 Identities = 146/178 (82%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 148 atctgcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctcttt 207 ||||||| |||||||| | | ||||| || ||||| ||||||||||| ||||||||| | Sbjct: 58 atctgcaggaagaagtccattgagctgctggaagaacttggcctccccaagggcctcctg 117 Query: 208 cctatggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagtt 267 || |||| |||||||||||| |||| |||||| || | ||| ||| ||||||| || Sbjct: 118 ccattggaggacatcgaggagttcggctacaacagggacactggattcatgtggatggtg 177 Query: 268 cagaagaataagaaaa---agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||| ||| ||||| | |||||||||||||||||||||| |||||||| ||||||| Sbjct: 178 cagaggaagaagaagatcgagcacaccttcaagaagatcaagcagaccgtttcctacg 235
>ref|NM_001065299.1| Oryza sativa (japonica cultivar-group) Os07g0118200 (Os07g0118200) mRNA, complete cds Length = 1068 Score = 95.6 bits (48), Expect = 2e-16 Identities = 179/222 (80%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 104 tcgagagccaccgcgccggcgccgaggtgctcaagggggacgatatctgcaagaagaagt 163 |||||||||||||||||||||| ||| | |||| || || || ||||||| |||||||| Sbjct: 653 tcgagagccaccgcgccggcgcggagatcgtcaacggcgatgacatctgcaggaagaagt 712 Query: 164 gcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatggacgacatcg 223 | |||||||||| | |||||| |||||||| | ||| ||| | || |||| ||||||| Sbjct: 713 ccatcgagcttctgggagagctcggcctccccatggggctcctgccattggaggacatcg 772 Query: 224 aggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcagaagaataagaaaa 283 ||||| |||| ||||||| |||| |||||| | ||||| || |||| ||| ||||| | Sbjct: 773 aggagttcggctacaaccgggagaccgggttcatctggatggtgcagaggaagaagaaga 832 Query: 284 ---agcacaccttcaagaagatcaaccagaccgtctcctacg 322 ||||| ||||||||||||||| |||| ||| ||||||| Sbjct: 833 tcgagcacgtcttcaagaagatcaagcagaacgtgtcctacg 874 Score = 65.9 bits (33), Expect = 2e-07 Identities = 110/135 (81%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 180 agagcttggcctcccgaagggcctctttcctatggacgacatcgaggaggtcgggtacaa 239 |||||| || ||||| ||||||||| | || |||| |||||||||||| |||| ||||| Sbjct: 90 agagctcggtctccctaagggcctcctgccattggaggacatcgaggagttcggctacaa 149 Query: 240 ccatgagagtgggttcgtgtggatagttcagaagaataagaaaa---agcacaccttcaa 296 || || | ||| ||| ||||| | || |||||||| ||||| | ||||||||||||| Sbjct: 150 ccgggacactggattcatgtggctggtgcagaagaagaagaagatcgagcacaccttcaa 209 Query: 297 gaagatcaaccagac 311 ||||||||| ||||| Sbjct: 210 gaagatcaagcagac 224
>dbj|AP003810.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_A04 Length = 128906 Score = 95.6 bits (48), Expect = 2e-16 Identities = 179/222 (80%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 104 tcgagagccaccgcgccggcgccgaggtgctcaagggggacgatatctgcaagaagaagt 163 |||||||||||||||||||||| ||| | |||| || || || ||||||| |||||||| Sbjct: 79681 tcgagagccaccgcgccggcgcggagatcgtcaacggcgatgacatctgcaggaagaagt 79740 Query: 164 gcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatggacgacatcg 223 | |||||||||| | |||||| |||||||| | ||| ||| | || |||| ||||||| Sbjct: 79741 ccatcgagcttctgggagagctcggcctccccatggggctcctgccattggaggacatcg 79800 Query: 224 aggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcagaagaataagaaaa 283 ||||| |||| ||||||| |||| |||||| | ||||| || |||| ||| ||||| | Sbjct: 79801 aggagttcggctacaaccgggagaccgggttcatctggatggtgcagaggaagaagaaga 79860 Query: 284 ---agcacaccttcaagaagatcaaccagaccgtctcctacg 322 ||||| ||||||||||||||| |||| ||| ||||||| Sbjct: 79861 tcgagcacgtcttcaagaagatcaagcagaacgtgtcctacg 79902 Score = 65.9 bits (33), Expect = 2e-07 Identities = 110/135 (81%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 180 agagcttggcctcccgaagggcctctttcctatggacgacatcgaggaggtcgggtacaa 239 |||||| || ||||| ||||||||| | || |||| |||||||||||| |||| ||||| Sbjct: 76378 agagctcggtctccctaagggcctcctgccattggaggacatcgaggagttcggctacaa 76437 Query: 240 ccatgagagtgggttcgtgtggatagttcagaagaataagaaaa---agcacaccttcaa 296 || || | ||| ||| ||||| | || |||||||| ||||| | ||||||||||||| Sbjct: 76438 ccgggacactggattcatgtggctggtgcagaagaagaagaagatcgagcacaccttcaa 76497 Query: 297 gaagatcaaccagac 311 ||||||||| ||||| Sbjct: 76498 gaagatcaagcagac 76512
>ref|NM_001065308.1| Oryza sativa (japonica cultivar-group) Os07g0119800 (Os07g0119800) mRNA, complete cds Length = 432 Score = 87.7 bits (44), Expect = 5e-14 Identities = 178/222 (80%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 104 tcgagagccaccgcgccggcgccgaggtgctcaagggggacgatatctgcaagaagaagt 163 ||||||||||||| |||||||| ||| | ||| || |||| |||||| |||||||| Sbjct: 17 tcgagagccaccgtgccggcgcggagattgtcaccggagacggcgtctgcaggaagaagt 76 Query: 164 gcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatggacgacatcg 223 | | ||||| || |||||||| |||||||| ||||||||| | || |||| ||||||| Sbjct: 77 ccattgagctgctggaagagctgggcctccccaagggcctcctgccattggaggacatcg 136 Query: 224 aggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcagaagaataagaaaa 283 ||||| |||| |||||| | || | || ||| ||||| | || |||| ||| ||||| | Sbjct: 137 aggagttcggctacaacaaggaaacaggattcatgtggctggtgcagaggaagaagaaga 196 Query: 284 ---agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||||||||||||||||||||| |||||||| ||||||| Sbjct: 197 tcgagcacaccttcaagaagatcaagcagaccgtgtcctacg 238
>emb|CT837886.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI014I20, full insert sequence Length = 691 Score = 79.8 bits (40), Expect = 1e-11 Identities = 177/222 (79%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 104 tcgagagccaccgcgccggcgccgaggtgctcaagggggacgatatctgcaagaagaagt 163 ||||||||||||| |||||||| ||| | ||| || |||| |||||| |||||||| Sbjct: 123 tcgagagccaccgtgccggcgcggagattgtcaccggagacggcgtctgcaggaagaagt 182 Query: 164 gcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatggacgacatcg 223 | | ||||| || |||||||| |||||||| ||||||||| | || |||| ||||||| Sbjct: 183 ccattgagctgctggaagagctgggcctccccaagggcctcctgccattggaggacatcg 242 Query: 224 aggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcagaagaataagaaaa 283 ||||| |||| |||||| || | || ||| ||||| | || |||| ||| ||||| | Sbjct: 243 aggagttcggctacaacagggaaacaggattcatgtggctggtgcagaggaagaagaaga 302 Query: 284 ---agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||||||||||||||||||||| |||||||| ||||||| Sbjct: 303 tcgagcacaccttcaagaagatcaagcagaccgtgtcctacg 344
>dbj|AK240702.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J043016C12, full insert sequence Length = 667 Score = 79.8 bits (40), Expect = 1e-11 Identities = 148/184 (80%) Strand = Plus / Plus Query: 152 gcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctctttccta 211 |||||||||||| | | ||||| || | ||||| ||||| || ||||||||||| || Sbjct: 144 gcaagaagaagtccattgagctgctccaggagctaggccttcccaagggcctcttcccct 203 Query: 212 tggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcaga 271 ||||||||||||||||| |||| ||||||| || | || ||| ||||||| |||| | Sbjct: 204 tggacgacatcgaggagttcggctacaaccgtgcaaacggtttcatgtggattcttcata 263 Query: 272 agaataagaaaaagcacaccttcaagaagatcaaccagaccgtctcctacgacactgtgg 331 || ||||| | || ||||||||||||||||| |||||||||||||||| ||| | || Sbjct: 264 gcaagaagaaggaacataccttcaagaagatcaagcagaccgtctcctacgccaccgagg 323 Query: 332 tgac 335 |||| Sbjct: 324 tgac 327
>dbj|AK241724.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065198L06, full insert sequence Length = 701 Score = 79.8 bits (40), Expect = 1e-11 Identities = 138/170 (81%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 156 gaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatgga 215 |||||||| | ||||||| || || ||||| |||||||| ||||||||| | || |||| Sbjct: 159 gaagaagtccatcgagctgctggaggagctcggcctccccaagggcctcctgccattgga 218 Query: 216 cgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcagaagaa 275 |||||||||||| | || |||||| | || | || ||| ||||| | || |||| ||| Sbjct: 219 ggacatcgaggagtttggctacaacaaggaaacaggattcatgtggctggtgcagaggaa 278 Query: 276 taagaaaa---agcacaccttcaagaagatcaaccagaccgtctcctacg 322 ||||| | |||||||||||||||||||||| |||||||||||||||| Sbjct: 279 gaagaagatcgagcacaccttcaagaagatcaagcagaccgtctcctacg 328
>ref|NM_001074739.1| Oryza sativa (japonica cultivar-group) Os11g0594800 (Os11g0594800) mRNA, complete cds Length = 429 Score = 79.8 bits (40), Expect = 1e-11 Identities = 148/184 (80%) Strand = Plus / Plus Query: 152 gcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctctttccta 211 |||||||||||| | | ||||| || | ||||| ||||| || ||||||||||| || Sbjct: 65 gcaagaagaagtccattgagctgctccaggagctaggccttcccaagggcctcttcccct 124 Query: 212 tggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcaga 271 ||||||||||||||||| |||| ||||||| || | || ||| ||||||| |||| | Sbjct: 125 tggacgacatcgaggagttcggctacaaccgtgcaaacggtttcatgtggattcttcata 184 Query: 272 agaataagaaaaagcacaccttcaagaagatcaaccagaccgtctcctacgacactgtgg 331 || ||||| | || ||||||||||||||||| |||||||||||||||| ||| | || Sbjct: 185 gcaagaagaaggaacataccttcaagaagatcaagcagaccgtctcctacgccaccgagg 244 Query: 332 tgac 335 |||| Sbjct: 245 tgac 248
>ref|NM_001065309.1| Oryza sativa (japonica cultivar-group) Os07g0120000 (Os07g0120000) mRNA, complete cds Length = 519 Score = 79.8 bits (40), Expect = 1e-11 Identities = 112/136 (82%) Strand = Plus / Plus Query: 104 tcgagagccaccgcgccggcgccgaggtgctcaagggggacgatatctgcaagaagaagt 163 |||||||||||||||||||||| ||| | |||| || || || ||||||| |||||||| Sbjct: 14 tcgagagccaccgcgccggcgcggagatcgtcaacggcgatgacatctgcaggaagaagt 73 Query: 164 gcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcctatggacgacatcg 223 | |||||||||| | |||||| |||||||| | ||| ||| | || |||| ||||||| Sbjct: 74 ccatcgagcttctgggagagctcggcctccccatggggctcctgccattggaggacatcg 133 Query: 224 aggaggtcgggtacaa 239 ||||| |||| ||||| Sbjct: 134 aggagttcggctacaa 149
>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017H17, complete sequence Length = 156331 Score = 79.8 bits (40), Expect = 1e-11 Identities = 148/184 (80%) Strand = Plus / Plus Query: 152 gcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctctttccta 211 |||||||||||| | | ||||| || | ||||| ||||| || ||||||||||| || Sbjct: 8445 gcaagaagaagtccattgagctgctccaggagctaggccttcccaagggcctcttcccct 8504 Query: 212 tggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcaga 271 ||||||||||||||||| |||| ||||||| || | || ||| ||||||| |||| | Sbjct: 8505 tggacgacatcgaggagttcggctacaaccgtgcaaacggtttcatgtggattcttcata 8564 Query: 272 agaataagaaaaagcacaccttcaagaagatcaaccagaccgtctcctacgacactgtgg 331 || ||||| | || ||||||||||||||||| |||||||||||||||| ||| | || Sbjct: 8565 gcaagaagaaggaacataccttcaagaagatcaagcagaccgtctcctacgccaccgagg 8624 Query: 332 tgac 335 |||| Sbjct: 8625 tgac 8628 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 250 gggttcgtgtggatagttcagaagaataagaaaaagcacaccttcaagaagatcaaccag 309 |||||| ||||||| ||||| | ||| ||||| |||||||||||||||||||||| ||| Sbjct: 6767 gggttcatgtggattgttcacaggaagaagaaggagcacaccttcaagaagatcaagcag 6826 Query: 310 accgtctccta 320 || |||||||| Sbjct: 6827 acagtctccta 6837 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||| ||||||||||||||||| |||||||||||||||| Sbjct: 14283 agcataccttcaagaagatcaagcagaccgtctcctacg 14321 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 398 tggtcgaggtctttgtggatgagtcttctgctg 430 |||| ||||||| ||| |||||||||||||||| Sbjct: 6927 tggttgaggtctatgttgatgagtcttctgctg 6959
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 79.8 bits (40), Expect = 1e-11 Identities = 148/184 (80%) Strand = Plus / Plus Query: 152 gcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctctttccta 211 |||||||||||| | | ||||| || | ||||| ||||| || ||||||||||| || Sbjct: 149655 gcaagaagaagtccattgagctgctccaggagctaggccttcccaagggcctcttcccct 149714 Query: 212 tggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcaga 271 ||||||||||||||||| |||| ||||||| || | || ||| ||||||| |||| | Sbjct: 149715 tggacgacatcgaggagttcggctacaaccgtgcaaacggtttcatgtggattcttcata 149774 Query: 272 agaataagaaaaagcacaccttcaagaagatcaaccagaccgtctcctacgacactgtgg 331 || ||||| | || ||||||||||||||||| |||||||||||||||| ||| | || Sbjct: 149775 gcaagaagaaggaacataccttcaagaagatcaagcagaccgtctcctacgccaccgagg 149834 Query: 332 tgac 335 |||| Sbjct: 149835 tgac 149838 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 250 gggttcgtgtggatagttcagaagaataagaaaaagcacaccttcaagaagatcaaccag 309 |||||| ||||||| ||||| | ||| ||||| |||||||||||||||||||||| ||| Sbjct: 147977 gggttcatgtggattgttcacaggaagaagaaggagcacaccttcaagaagatcaagcag 148036 Query: 310 accgtctccta 320 || |||||||| Sbjct: 148037 acagtctccta 148047 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||| ||||||||||||||||| |||||||||||||||| Sbjct: 155493 agcataccttcaagaagatcaagcagaccgtctcctacg 155531 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 398 tggtcgaggtctttgtggatgagtcttctgctg 430 |||| ||||||| ||| |||||||||||||||| Sbjct: 148137 tggttgaggtctatgttgatgagtcttctgctg 148169
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 79.8 bits (40), Expect = 1e-11 Identities = 148/184 (80%) Strand = Plus / Plus Query: 152 gcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctctttccta 211 |||||||||||| | | ||||| || | ||||| ||||| || ||||||||||| || Sbjct: 21797602 gcaagaagaagtccattgagctgctccaggagctaggccttcccaagggcctcttcccct 21797661 Query: 212 tggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcaga 271 ||||||||||||||||| |||| ||||||| || | || ||| ||||||| |||| | Sbjct: 21797662 tggacgacatcgaggagttcggctacaaccgtgcaaacggtttcatgtggattcttcata 21797721 Query: 272 agaataagaaaaagcacaccttcaagaagatcaaccagaccgtctcctacgacactgtgg 331 || ||||| | || ||||||||||||||||| |||||||||||||||| ||| | || Sbjct: 21797722 gcaagaagaaggaacataccttcaagaagatcaagcagaccgtctcctacgccaccgagg 21797781 Query: 332 tgac 335 |||| Sbjct: 21797782 tgac 21797785 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 250 gggttcgtgtggatagttcagaagaataagaaaaagcacaccttcaagaagatcaaccag 309 |||||| ||||||| ||||| | ||| ||||| |||||||||||||||||||||| ||| Sbjct: 21795924 gggttcatgtggattgttcacaggaagaagaaggagcacaccttcaagaagatcaagcag 21795983 Query: 310 accgtctccta 320 || |||||||| Sbjct: 21795984 acagtctccta 21795994 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||| ||||||||||||||||| |||||||||||||||| Sbjct: 21803440 agcataccttcaagaagatcaagcagaccgtctcctacg 21803478 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 398 tggtcgaggtctttgtggatgagtcttctgctg 430 |||| ||||||| ||| |||||||||||||||| Sbjct: 21796084 tggttgaggtctatgttgatgagtcttctgctg 21796116
>ref|NM_001074738.1| Oryza sativa (japonica cultivar-group) Os11g0594700 (Os11g0594700) mRNA, complete cds Length = 429 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 250 gggttcgtgtggatagttcagaagaataagaaaaagcacaccttcaagaagatcaaccag 309 |||||| ||||||| ||||| | ||| ||||| |||||||||||||||||||||| ||| Sbjct: 163 gggttcatgtggattgttcacaggaagaagaaggagcacaccttcaagaagatcaagcag 222 Query: 310 accgtctccta 320 || |||||||| Sbjct: 223 acagtctccta 233 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 398 tggtcgaggtctttgtggatgagtcttctgctg 430 |||| ||||||| ||| |||||||||||||||| Sbjct: 323 tggttgaggtctatgttgatgagtcttctgctg 355
>ref|NM_001074740.1| Oryza sativa (japonica cultivar-group) Os11g0595000 (Os11g0595000) mRNA, complete cds Length = 381 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 agcacaccttcaagaagatcaaccagaccgtctcctacg 322 |||| ||||||||||||||||| |||||||||||||||| Sbjct: 149 agcataccttcaagaagatcaagcagaccgtctcctacg 187
>gb|DQ245842.1| Zea mays clone 20787 mRNA sequence Length = 699 Score = 60.0 bits (30), Expect = 1e-05 Identities = 131/164 (79%), Gaps = 3/164 (1%) Strand = Plus / Plus Query: 151 tgcaagaagaagtgcgtcgagcttcttgaagagcttggcctcccgaagggcctctttcct 210 |||| |||||||| | | ||||| || || ||||| ||||| || |||||||| ||||| Sbjct: 155 tgcaggaagaagtccattgagctgctggaggagctgggccttcccaagggcctgcttcct 214 Query: 211 atggacgacatcgaggaggtcgggtacaaccatgagagtgggttcgtgtggatagttcag 270 ||||| |||||| ||||| |||| ||||||| ||| | |||||| ||||| | || ||| Sbjct: 215 atggaggacatccaggagttcggatacaaccgtgacacggggttcatgtggctggtgcag 274 Query: 271 aagaataagaaaa---agcacaccttcaagaagatcaaccagac 311 ||| ||||| |||||||||||||||||||||| ||||| Sbjct: 275 gggaagaagaaggtcgagcacaccttcaagaagatcaagcagac 318
>gb|DQ245429.1| Zea mays clone 15432 mRNA sequence Length = 739 Score = 44.1 bits (22), Expect = 0.61 Identities = 61/74 (82%) Strand = Plus / Plus Query: 284 agcacaccttcaagaagatcaaccagaccgtctcctacgacactgtggtgaccgcttttg 343 |||||||||||| |||||||| ||||| || || |||| ||||| |||||| || || | Sbjct: 312 agcacaccttcagaaagatcaagcagactgtgtcgtacgccactgaggtgacggcattcg 371 Query: 344 tggagaagggcaag 357 |||||||||||| Sbjct: 372 ccgagaagggcaag 385 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 104 tcgagagccaccgcgccggcgccgaggt 131 ||||||||||||| |||||||| ||||| Sbjct: 126 tcgagagccaccgtgccggcgctgaggt 153
>gb|AC187716.2| Callithrix jacchus BAC clone CH259-71H12 from chromosome unknown, complete sequence Length = 165346 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 592 gttttctttgtaatccaataaa 613 |||||||||||||||||||||| Sbjct: 133926 gttttctttgtaatccaataaa 133905
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 cgcgccggcgccgaggtgctc 135 ||||||||||||||||||||| Sbjct: 2127419 cgcgccggcgccgaggtgctc 2127439
>gb|AF353369.1| Skogsbergia lerneri clone SlF2_CE_3 opsin mRNA, partial cds Length = 475 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 gagcttcttgaagagcttggc 189 ||||||||||||||||||||| Sbjct: 230 gagcttcttgaagagcttggc 210
>gb|AF353367.1| Skogsbergia lerneri clone SlF2_CE_14_15 opsin mRNA, partial cds Length = 464 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 gagcttcttgaagagcttggc 189 ||||||||||||||||||||| Sbjct: 230 gagcttcttgaagagcttggc 210
>gb|AF353344.1| Skogsbergia lerneri clone SlF1_CE15 opsin mRNA, partial cds Length = 339 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 gagcttcttgaagagcttggc 189 ||||||||||||||||||||| Sbjct: 230 gagcttcttgaagagcttggc 210
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome Length = 2314078 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 aaagtgagagaatggttcggc 555 ||||||||||||||||||||| Sbjct: 1087442 aaagtgagagaatggttcggc 1087422
>gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosome 19, complete sequence Length = 240536 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 cccagcaaacaatccccctac 73 ||||||||||||||||||||| Sbjct: 87948 cccagcaaacaatccccctac 87968
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 tggacgacatcgaggaggtcg 232 ||||||||||||||||||||| Sbjct: 113315 tggacgacatcgaggaggtcg 113335
>gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, complete sequence Length = 110184 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 cttggcctcccgaagggcctc 204 ||||||||||||||||||||| Sbjct: 12693 cttggcctcccgaagggcctc 12673
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 tggacgacatcgaggaggtcg 232 ||||||||||||||||||||| Sbjct: 61128 tggacgacatcgaggaggtcg 61108
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 tggacgacatcgaggaggtcg 232 ||||||||||||||||||||| Sbjct: 11305327 tggacgacatcgaggaggtcg 11305347
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 ccgcgccggcgccgaggtgct 134 ||||||||||||||||||||| Sbjct: 3077281 ccgcgccggcgccgaggtgct 3077261 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ccgcgccggcgccgaggtgc 133 |||||||||||||||||||| Sbjct: 1839544 ccgcgccggcgccgaggtgc 1839563
>emb|AL596209.13| Mouse DNA sequence from clone RP23-278F12 on chromosome 11 Contains the 3' end of the Ulk2 gene for Unc-51 like kinase 2 (C. elegans), the Prpsap2 gene for phosphoribosyl pyrophosphate synthetase-associated protein 2, the gene for a novel sodium/glucose cotransporter protein, the gene for a novel protein (2310040C09Rik), the Grap gene for GRB2-related adaptor protein and a CpG island, complete sequence Length = 186359 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 accaaaccaacaaactaaaacccca 48 ||||||| ||||||||||||||||| Sbjct: 64615 accaaactaacaaactaaaacccca 64591
>ref|XM_001031481.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00823790) mRNA, complete cds Length = 8469 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 atatctgcaagaagaagtgc 165 |||||||||||||||||||| Sbjct: 7372 atatctgcaagaagaagtgc 7391
>gb|AC186057.3| Canis Familiaris chromosome 1, clone XX-190A2, complete sequence Length = 213739 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ccgcgccggcgccgaggtgc 133 |||||||||||||||||||| Sbjct: 187283 ccgcgccggcgccgaggtgc 187302
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 aagaagaagtgcgtcgagct 173 |||||||||||||||||||| Sbjct: 2389506 aagaagaagtgcgtcgagct 2389487
>gb|AY466373.1| Macrobrachium rosenbergii crustacean hyperglycemic hormone precursor (CHH-B) mRNA, complete cds Length = 2133 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gtcgagcttcttgaagagct 185 |||||||||||||||||||| Sbjct: 459 gtcgagcttcttgaagagct 440
>gb|AY466494.1| Macrobrachium rosenbergii crustacean hyperglycemic hormone precursor (CHH-B) gene, complete cds Length = 3875 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gtcgagcttcttgaagagct 185 |||||||||||||||||||| Sbjct: 1854 gtcgagcttcttgaagagct 1835
>gb|AC118592.7| Mus musculus chromosome 7, clone RP24-463B5, complete sequence Length = 134114 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 caaaccaacaaactaaaacc 45 |||||||||||||||||||| Sbjct: 37912 caaaccaacaaactaaaacc 37931
>gb|AF372657.1| Macrobrachium rosenbergii crustacean hyperglycemic hormone gill form and crustacean hyperglycemic hormone eyestalk form (CHH) gene, complete cds; alternatively spliced Length = 3847 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gtcgagcttcttgaagagct 185 |||||||||||||||||||| Sbjct: 1846 gtcgagcttcttgaagagct 1827
>gb|AF219382.1| Macrobrachium rosenbergii crustacean hyperglycemic hormone mRNA, complete cds Length = 1002 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gtcgagcttcttgaagagct 185 |||||||||||||||||||| Sbjct: 448 gtcgagcttcttgaagagct 429
>gb|AC123877.5| Mus musculus BAC clone RP23-297J18 from chromosome 5, complete sequence Length = 183152 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 accaaaccaacaaactaaaa 43 |||||||||||||||||||| Sbjct: 94359 accaaaccaacaaactaaaa 94378
>gb|AC125542.4| Mus musculus BAC clone RP23-321C24 from chromosome 5, complete sequence Length = 194326 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 accaaaccaacaaactaaaa 43 |||||||||||||||||||| Sbjct: 74228 accaaaccaacaaactaaaa 74209
>gb|AC121912.3| Mus musculus BAC clone RP24-183P18 from chromosome 14, complete sequence Length = 198542 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 agaataaagtgagagaatgg 549 |||||||||||||||||||| Sbjct: 86378 agaataaagtgagagaatgg 86359
>gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete sequence Length = 227968 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 caaaccaacaaactaaaacc 45 |||||||||||||||||||| Sbjct: 55147 caaaccaacaaactaaaacc 55128
>gb|AC102494.6| Mus musculus chromosome 7, clone RP24-565J5, complete sequence Length = 161721 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gatcacattcaacaagctca 20 |||||||||||||||||||| Sbjct: 101513 gatcacattcaacaagctca 101532
>gb|AC146561.22| Medicago truncatula clone mth2-12j18, complete sequence Length = 135940 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 aagaataagaaaaagcacaccttc 294 ||||| |||||||||||||||||| Sbjct: 20247 aagaaaaagaaaaagcacaccttc 20270
>gb|AC026898.8| Homo sapiens chromosome 18, clone RP11-767C4, complete sequence Length = 187295 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaagaataaagtgagagaa 546 |||||||||||||||||||| Sbjct: 143104 agaagaataaagtgagagaa 143123
>gb|AC110027.5| Homo sapiens chromosome 15, clone RP11-452K20, complete sequence Length = 177770 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaagaataaagtgagagaa 546 |||||||||||||||||||| Sbjct: 39422 agaagaataaagtgagagaa 39403
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gccaccgcgccggcgccgag 129 |||||||||||||||||||| Sbjct: 655500 gccaccgcgccggcgccgag 655481
>gb|AE012523.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 431 of 460 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 ggtcaccatcaagaccgacg 454 |||||||||||||||||||| Sbjct: 5522 ggtcaccatcaagaccgacg 5503
>emb|CR391990.8| Zebrafish DNA sequence from clone DKEY-261M5 in linkage group 14, complete sequence Length = 165493 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gagcttcttgaagagcttgg 188 |||||||||||||||||||| Sbjct: 123040 gagcttcttgaagagcttgg 123021
>dbj|AB120119.1| Uncultured bacterium gene for sialic acid-specific 9-O-acetylesterase, transport protein and beta-1,4-xylanase, complete cds Length = 4589 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cttcttgaagagcttggcct 191 |||||||||||||||||||| Sbjct: 2848 cttcttgaagagcttggcct 2867
>gb|AC046195.9| Homo sapiens chromosome 8, clone RP11-238K6, complete sequence Length = 161507 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 520 aaagtccagaagaataaagtgaga 543 ||||||||| |||||||||||||| Sbjct: 80303 aaagtccagtagaataaagtgaga 80326
>emb|AL390715.23| Human DNA sequence from clone RP11-167O6 on chromosome 10 Contains the ARHGAP12 gene for Rho GTPase activating protein 12 and two CpG islands, complete sequence Length = 189161 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaagaataaagtgagagaa 546 |||||||||||||||||||| Sbjct: 114365 agaagaataaagtgagagaa 114384
>ref|XM_686970.1| PREDICTED: Danio rerio similar to Retrovirus-related Pol polyprotein from transposon 412 (LOC563609), mRNA Length = 6309 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gagcttcttgaagagcttgg 188 |||||||||||||||||||| Sbjct: 1285 gagcttcttgaagagcttgg 1304
>gb|AC155814.6| Mus musculus BAC clone RP24-137M22 from chromosome 8, complete sequence Length = 191336 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 aaaaagcacaccttcaagaa 299 |||||||||||||||||||| Sbjct: 5702 aaaaagcacaccttcaagaa 5721
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 ggtcaccatcaagaccgacg 454 |||||||||||||||||||| Sbjct: 4842186 ggtcaccatcaagaccgacg 4842167
>gb|AF317554.1|AF317554 Macrobrachium rosenbergii hyperglycemic hormone (CHH-H) mRNA, partial cds Length = 267 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gtcgagcttcttgaagagct 185 |||||||||||||||||||| Sbjct: 38 gtcgagcttcttgaagagct 19
>emb|AL645685.12| Mouse DNA sequence from clone RP23-198I4 on chromosome 1 Contains a ribosomal protein S13 (Rps13) pseudogene, a ribosomal protein S27 (Rps27) pseudogene a novel genes and the 3' end of a novel gene, complete sequence Length = 218950 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 26 caaaccaacaaactaaaaccccacttcc 53 ||||| ||||||| |||||||||||||| Sbjct: 216325 caaacaaacaaacaaaaaccccacttcc 216352
>emb|AJ130968.1|MRO130968 Macrobrachium rosenbergii partial mRNA for Crustacean Hyperglycemic Hormone (CHH gene) Length = 222 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gtcgagcttcttgaagagct 185 |||||||||||||||||||| Sbjct: 60 gtcgagcttcttgaagagct 41
>gb|AC135626.4| Homo sapiens chromosome 15, clone RP11-354B3, complete sequence Length = 180684 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaagaataaagtgagagaa 546 |||||||||||||||||||| Sbjct: 156054 agaagaataaagtgagagaa 156035
>gb|AY168756.2| Serratia marcescens subsp. marcescens sdeAB operon, complete sequence Length = 4356 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 gccaccgcgccggcgccgaggtgc 133 ||||| |||||||||||||||||| Sbjct: 4202 gccacggcgccggcgccgaggtgc 4225
>emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, complete sequence Length = 169897 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gagcttcttgaagagcttgg 188 |||||||||||||||||||| Sbjct: 5344 gagcttcttgaagagcttgg 5325
>gb|AC164611.3| Mus musculus BAC clone RP23-421C2 from chromosome 8, complete sequence Length = 188068 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 aaaaagcacaccttcaagaa 299 |||||||||||||||||||| Sbjct: 160260 aaaaagcacaccttcaagaa 160279
>gb|AF088854.1|AF088854 Macrobrachium lanchesteri crustacean hyperglycemic hormone (CHH) gene, complete cds Length = 4087 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gtcgagcttcttgaagagct 185 |||||||||||||||||||| Sbjct: 1860 gtcgagcttcttgaagagct 1841
>emb|CT573053.1| Medicago truncatula chromosome 5 clone mte1-8e5, COMPLETE SEQUENCE Length = 106640 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 aagaataagaaaaagcacaccttc 294 ||||| |||||||||||||||||| Sbjct: 47381 aagaaaaagaaaaagcacaccttc 47358
>emb|AL772395.12| Mouse DNA sequence from clone RP23-39O1 on chromosome 4, complete sequence Length = 183256 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 aagaataagaaaaagcacac 290 |||||||||||||||||||| Sbjct: 56937 aagaataagaaaaagcacac 56956 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 109,957,192 Number of extensions: 6103621 Number of successful extensions: 128931 Number of sequences better than 10.0: 70 Number of HSP's gapped: 128913 Number of HSP's successfully gapped: 112 Length of query: 641 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 619 Effective length of database: 18,508,616,841 Effective search space: 11456833824579 Effective search space used: 11456833824579 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)