ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf173d19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103741:Os05g0279300 | 382 | e-106 | 2 | AK101810:Os12g0194800 | 75 | 9e-14 | 3 | Os03g0381100:Os03g0381100 | 72 | 6e-13 | 4 | Os06g0663100:Os06g0663100 | 64 | 2e-10 | 5 | AK099103:Os03g0263800 | 32 | 0.84 | 6 | AK061795:Os03g0263800 | 32 | 0.84 | 7 | AK102068:Os01g0885300 | 29 | 5.5 | 8 | AK067070:Os01g0885300 | 29 | 5.5 | 9 | AK104009:Os08g0541400 | 28 | 9.3 | 10 | AK068255:Os08g0541400 | 28 | 9.3 |
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>AK103741:Os05g0279300 | Length = 223 Score = 382 bits (982), Expect = e-106 Identities = 185/220 (84%), Positives = 202/220 (91%) Frame = +2 Query: 353 VAHFTTPFAYHCLDSFHSAINGLLPPDIRVREISAACGEFHARTSTKSKIYHYKIYNEAV 532 VAHFTTPF+YHCLDS HSAINGLLP +IRVREISAA EFHARTST+SKIYHYKIYN V Sbjct: 4 VAHFTTPFSYHCLDSMHSAINGLLPHEIRVREISAAKPEFHARTSTRSKIYHYKIYNGPV 63 Query: 533 MDPFHTNYAYHSAHKLNPHAMQEAANHFVGVHDFTSFANAVHNDRVRSPIKKISRFDVTK 712 MDPFH +YAYHSA+KLN AM+EAA HFVG HDFTSFANAVHNDRVRSPIKKI RFDV + Sbjct: 64 MDPFHNHYAYHSAYKLNSQAMREAAKHFVGTHDFTSFANAVHNDRVRSPIKKIMRFDVIE 123 Query: 713 MDAIIQLEVEGTGFLYRQVRNMVALLIQVGREGLPPEIVPKIIAAKDRKELAKVALSAPP 892 M AI+QLE+EGTGFLYRQVRNMVALL+QVGRE LPP+IV KIIAA+DRKELAKVALSAPP Sbjct: 124 MGAILQLEIEGTGFLYRQVRNMVALLLQVGREALPPDIVAKIIAARDRKELAKVALSAPP 183 Query: 893 HGLYLMSVNYDKEILKPPVGSPPVSFGRTHQISRCKLLFY 1012 HGLYLMSVNYDKE+L+PP G+P +SFGRTHQIS+CKLLFY Sbjct: 184 HGLYLMSVNYDKEMLQPPEGAPHISFGRTHQISKCKLLFY 223
>AK101810:Os12g0194800 | Length = 391 Score = 75.1 bits (183), Expect = 9e-14 Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%) Frame = +2 Query: 164 SRKWRMVIAYDGTKFKGWQYQPSPPTIQCFLEKALMRITKLDRKELCLVGAGRTDTGVHA 343 ++++ + + Y GT+F G Q Q + T+ LE+A + C + RTDTGVHA Sbjct: 70 AQRYLVAVEYVGTRFSGSQQQLNQRTVVGVLEEAFHKFIGQPVSIFC---SSRTDTGVHA 126 Query: 344 RGQVAHFTTP----------FAYHCLDSFHSAINGLLPP---DIRVREISAACGEFHART 484 V H H A+N L DI V ++ +FHAR Sbjct: 127 LSNVCHVDVERISKRKPGEMLPPHEPGVVKRAVNHFLQKNEGDIMVTDVRCVAPDFHARY 186 Query: 485 STKSKIYHYKIYNEAV-MDPFHTNYAYHSAHKLNPHAMQEAANHFVGVHDFTSFANAVHN 661 + YHY++ + + + F A+H LN AM++A + VG HDF+SF Sbjct: 187 KALERTYHYRLLSGSEPLSVFEKTSAWHIPEDLNVQAMKKACSILVGHHDFSSF--RATG 244 Query: 662 DRVRSPIKKISRFDVTKM 715 + SP++ + VT++ Sbjct: 245 CQANSPMRTLDELSVTEV 262 Score = 40.4 bits (93), Expect = 0.002 Identities = 26/61 (42%), Positives = 32/61 (52%) Frame = +2 Query: 752 FLYRQVRNMVALLIQVGREGLPPEIVPKIIAAKDRKELAKVALSAPPHGLYLMSVNYDKE 931 FLY QVR MV LL VG L E V +I+ + K + AP GLYL +V YD Sbjct: 334 FLYHQVRLMVGLLKSVGTGDLTTEDVERIL---NLKAVTAAPPMAPACGLYLANVKYDLS 390 Query: 932 I 934 + Sbjct: 391 V 391
>Os03g0381100:Os03g0381100 | Length = 411 Score = 72.4 bits (176), Expect = 6e-13 Identities = 79/258 (30%), Positives = 111/258 (43%), Gaps = 10/258 (3%) Frame = +2 Query: 185 IAYDGTKFKGWQYQP-SPPTIQCFLEKALMRITKL--DRKELCLVGAGRTDTGVHARGQV 355 I Y G +F G+ + + PT++ + KAL R L RKE C GRTD GV A GQV Sbjct: 98 IMYFGQRFYGFASEAHTEPTVESEIFKALERAKLLVGSRKESCYSRCGRTDKGVSATGQV 157 Query: 356 AHFTTPFAYHCLDSFHSAINGLLPPDIRVREISAACGEFHARTSTKSKIYHYKIYNEAVM 535 S I D ++ + G+F AR S + Y Y + Sbjct: 158 ISLF----------LRSNIK-----DAKLDVLDNKSGDFLARFSCLGREYKYLFWKG--- 199 Query: 536 DPFHTNYAYHSAHKLNPHAMQEAANHFVGVHDFTSF----ANAVHNDRVRSPIKKISRFD 703 LN MQ+AA F+G HD+ +F A V N R IS +D Sbjct: 200 -------------DLNISEMQKAALKFIGEHDYRNFCKMDAANVSNYRRHITDFNISAYD 246 Query: 704 V-TKMDAIIQLEVEGTGFLYRQVRNMVALLIQVGREGLPPEIVPKI--IAAKDRKELAKV 874 + D + + ++G+ FL+ QVR MVA+L +G+ P IV + I RK K+ Sbjct: 247 QRSNYDELWAITIKGSAFLWHQVRCMVAVLFLIGQGLETPCIVDSLLDITKTPRKPQYKM 306 Query: 875 ALSAPPHGLYLMSVNYDK 928 A P L L S +D+ Sbjct: 307 ASEIP---LILRSCLFDE 321
>Os06g0663100:Os06g0663100 | Length = 417 Score = 63.9 bits (154), Expect = 2e-10 Identities = 77/294 (26%), Positives = 113/294 (38%), Gaps = 43/294 (14%) Frame = +2 Query: 173 WRMVIAYDGTKFKGWQYQPSPPTIQCFLEKAL------MRITKLDRKEL----CLVGAGR 322 +++V++Y G F GWQ QP T+Q +EK L + +L+ + L C V AGR Sbjct: 123 FKIVLSYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDEKKAKQLEARSLPLEGCAVVAGR 182 Query: 323 TDTGVHARGQVAHFTTPFAYHCLDSFHSAINGLLPPDIRVREISAACGEFHARTSTKSKI 502 TD GV A QV F T AIN P +R +S EFH + K + Sbjct: 183 TDKGVTALQQVCSFYTWRKDVKSSDIKDAINKAAPDKLRPLHVSQVSREFHPNFAAKWRR 242 Query: 503 YHYKIYNEAVMDPFHTNYAYHSAHKLN------PHAMQEAANHFVGVHD----------- 631 Y Y + P + S + + P + + VG D Sbjct: 243 YLY-------IFPLDEDVKLISGEEQSAKTVEGPECNIKPQSFDVGKVDKIIRQLEGKSL 295 Query: 632 -FTSFANAVHNDRVRSPIKKI----SRFDVTKMDA-----------IIQLEVEGTGFLYR 763 + FA R P + SR V K+ I +E+ FL + Sbjct: 296 SYKMFARDTQASRSVGPPTECFMFHSRAAVAKLHTADENCEEGTTRAICIELVANRFLRK 355 Query: 764 QVRNMVALLIQVGREGLPPEIVPKIIAAKDRKELAKVALSAPPHGLYLMSVNYD 925 VR +VA I+ G + + ++ A R+ A APP GL L+ V Y+ Sbjct: 356 MVRVLVATAIREAAAGAEEDALLNLMEATCRRATAP---PAPPDGLCLVDVGYE 406
>AK099103:Os03g0263800 | Length = 342 Score = 32.0 bits (71), Expect = 0.84 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = -2 Query: 490 CGCPSMEFSTSCANFSNSNIRR*KPIDC*MKTVETMVGKRRGEMCHLT-PCMNTCICPSC 314 CG ++ + SC N +N++ + K + + E C L PC + C+C C Sbjct: 261 CGDSEVDDTASCCNGGAANLQLMPKENRHSKDLTACRVCKSSEACMLLLPCRHLCLCKEC 320 Query: 313 TNQAKFLPV 287 ++ F P+ Sbjct: 321 ESKLSFCPL 329
>AK061795:Os03g0263800 | Length = 342 Score = 32.0 bits (71), Expect = 0.84 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = -2 Query: 490 CGCPSMEFSTSCANFSNSNIRR*KPIDC*MKTVETMVGKRRGEMCHLT-PCMNTCICPSC 314 CG ++ + SC N +N++ + K + + E C L PC + C+C C Sbjct: 261 CGDSEVDDTASCCNGGAANLQLMPKENRHSKDLTACRVCKSSEACMLLLPCRHLCLCKEC 320 Query: 313 TNQAKFLPV 287 ++ F P+ Sbjct: 321 ESKLSFCPL 329
>AK102068:Os01g0885300 | Length = 573 Score = 29.3 bits (64), Expect = 5.5 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 8/100 (8%) Frame = +2 Query: 710 KMDAIIQLEVEG--TGFLYRQVRNMVALLIQVGREGLPPEIVPKIIAAKDRKELAKVALS 883 KMD Q + G G Y VR ++ + R P+IVPK + L + ++S Sbjct: 196 KMDLEQQNAISGHSLGTAYEVVRAPKRIIEKDSRLRYAPKIVPKSVKTSSDSPLDRTSVS 255 Query: 884 APPHGLYL-MSVNY-----DKEILKPPVGSPPVSFGRTHQ 985 P L L MS+N + +L+ P +P G T + Sbjct: 256 KRPDSLKLGMSINQKAKTDNDRLLRGPNVAPHKMSGSTER 295
>AK067070:Os01g0885300 | Length = 573 Score = 29.3 bits (64), Expect = 5.5 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 8/100 (8%) Frame = +2 Query: 710 KMDAIIQLEVEG--TGFLYRQVRNMVALLIQVGREGLPPEIVPKIIAAKDRKELAKVALS 883 KMD Q + G G Y VR ++ + R P+IVPK + L + ++S Sbjct: 196 KMDLEQQNAISGHSLGTAYEVVRAPKRIIEKDSRLRYAPKIVPKSVKTSSDSPLDRTSVS 255 Query: 884 APPHGLYL-MSVNY-----DKEILKPPVGSPPVSFGRTHQ 985 P L L MS+N + +L+ P +P G T + Sbjct: 256 KRPDSLKLGMSINQKAKTDNDRLLRGPNVAPHKMSGSTER 295
>AK104009:Os08g0541400 | Length = 261 Score = 28.5 bits (62), Expect = 9.3 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = +2 Query: 809 GLPPEIVPKIIAAKDRKELAKVALSAPPHGLYLMSVNYDKEILKPPVG 952 GLPPE PK+ A K+L V + GL + E PP+G Sbjct: 118 GLPPEEKPKLCDAACEKDLENVPMVTTESGLQYKDIKVG-EGPSPPIG 164
>AK068255:Os08g0541400 | Length = 261 Score = 28.5 bits (62), Expect = 9.3 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = +2 Query: 809 GLPPEIVPKIIAAKDRKELAKVALSAPPHGLYLMSVNYDKEILKPPVG 952 GLPPE PK+ A K+L V + GL + E PP+G Sbjct: 118 GLPPEEKPKLCDAACEKDLENVPMVTTESGLQYKDIKVG-EGPSPPIG 164 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 36,515,230 Number of extensions: 865635 Number of successful extensions: 2350 Number of sequences better than 10.0: 10 Number of HSP's gapped: 2342 Number of HSP's successfully gapped: 11 Length of query: 382 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 280 Effective length of database: 11,315,673 Effective search space: 3168388440 Effective search space used: 3168388440 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
