ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf167c15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK069593:Os12g0233400 | 444 | e-125 | 2 | Os02g0805400:Os02g0805400 | 33 | 0.54 | 3 | AK100279:Os09g0442600 | 31 | 1.6 | 4 | AK099624:Os08g0457600 | 31 | 1.6 | 5 | AK065020:Os08g0457600 | 31 | 1.6 | 6 | AB095097:Os09g0442600 | 31 | 1.6 | 7 | AB095096:Os08g0457600 | 31 | 1.6 | 8 | AY676923:Os02g0462800 | 30 | 2.7 | 9 | AK110587:Os02g0462800 | 30 | 2.7 | 10 | AK111889:Os10g0160000 | 30 | 3.5 | 11 | AK073768:Os11g0636900 | 30 | 3.5 | 12 | AK059255:Os11g0636900 | 30 | 3.5 | 13 | AK067522:Os05g0546800 | 29 | 5.9 |
|---|
>AK069593:Os12g0233400 | Length = 275 Score = 444 bits (1143), Expect = e-125 Identities = 205/247 (82%), Positives = 221/247 (89%) Frame = +2 Query: 191 SHQELHEASGSRILHQTKPHTHEVHCSRERSRAAWKAIDEYLMPFVEKEKYELPSKCRLR 370 SHQE HEA+GSR L + HT++VHCSRERSRAAWKAIDEYLMPFVEKEKYELPSKCRL Sbjct: 29 SHQEFHEAAGSRTLLMSHEHTNQVHCSRERSRAAWKAIDEYLMPFVEKEKYELPSKCRLH 88 Query: 371 PENDMFREQEQHKIHFDVNEWRCGFCEKSFRAEKFIDQHFANRHNNLLDNSQGRCLADLC 550 P NDMFREQEQHKIHFD+NEWRCGFC+K+FRAEKF+DQHF NRHNNL+DNSQGRCLADLC Sbjct: 89 PGNDMFREQEQHKIHFDINEWRCGFCKKAFRAEKFLDQHFHNRHNNLVDNSQGRCLADLC 148 Query: 551 GALHCDLTMEFKKPKSKCNDAAAARNRHRCESLADSCFPINQGHSASRLHEFFLHQFCDA 730 GALHCDL +EFKKPKSKC+ AAARNRH CESLADSCFPINQG SASRLHEF L QFCDA Sbjct: 149 GALHCDLMLEFKKPKSKCSATAAARNRHLCESLADSCFPINQGQSASRLHEFLLRQFCDA 208 Query: 731 HTCNGVSKPFPKGGRKQTNRFYLAICILTVLLLPVFYLIVFLHQREMKKGDQVFKRIGKT 910 HTC SKPFPKGGRKQTNRFYLA+C LT++LLP+FYLIVFLHQREMKKG Q +RI K Sbjct: 209 HTCKNGSKPFPKGGRKQTNRFYLALCALTIVLLPLFYLIVFLHQREMKKGGQNLRRISKV 268 Query: 911 VHKKKPS 931 V KKKPS Sbjct: 269 VQKKKPS 275
>Os02g0805400:Os02g0805400 | Length = 401 Score = 32.7 bits (73), Expect = 0.54 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = -3 Query: 177 RQDAARKEARRDEWGRLAQLLILEAPEIVSPDGSALHSAPVEQAG*GASG 28 R D R +ARR EWGR A LL+ +P G + A +++ GA G Sbjct: 110 RGDVVRYDARRGEWGRCAPLLVPRFDFACAPCGGKICVAGGQRSLSGARG 159
>AK100279:Os09g0442600 | Length = 634 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = +3 Query: 147 FSPLSSRRLAFSWPDRIRN-CMKHLDPE 227 F PL++R SW D++ N C KHL+PE Sbjct: 285 FVPLANRLGIASWKDQLENLCFKHLNPE 312
>AK099624:Os08g0457600 | Length = 718 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = +3 Query: 147 FSPLSSRRLAFSWPDRIRN-CMKHLDPE 227 F PL++R SW D++ N C KHL+PE Sbjct: 369 FVPLANRLGIASWKDQLENICFKHLNPE 396
>AK065020:Os08g0457600 | Length = 718 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = +3 Query: 147 FSPLSSRRLAFSWPDRIRN-CMKHLDPE 227 F PL++R SW D++ N C KHL+PE Sbjct: 369 FVPLANRLGIASWKDQLENICFKHLNPE 396
>AB095097:Os09g0442600 | Length = 491 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = +3 Query: 147 FSPLSSRRLAFSWPDRIRN-CMKHLDPE 227 F PL++R SW D++ N C KHL+PE Sbjct: 142 FVPLANRLGIASWKDQLENLCFKHLNPE 169
>AB095096:Os08g0457600 | Length = 718 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = +3 Query: 147 FSPLSSRRLAFSWPDRIRN-CMKHLDPE 227 F PL++R SW D++ N C KHL+PE Sbjct: 369 FVPLANRLGIASWKDQLENICFKHLNPE 396
>AY676923:Os02g0462800 | Length = 253 Score = 30.4 bits (67), Expect = 2.7 Identities = 11/48 (22%), Positives = 24/48 (50%) Frame = +2 Query: 212 ASGSRILHQTKPHTHEVHCSRERSRAAWKAIDEYLMPFVEKEKYELPS 355 AS R+ + HCS+++ +A+W+A +P + ++P+ Sbjct: 121 ASDGRLKRSSDDDGERCHCSKKKRKASWRARRRIRVPAISSRNADIPA 168
>AK110587:Os02g0462800 | Length = 253 Score = 30.4 bits (67), Expect = 2.7 Identities = 11/48 (22%), Positives = 24/48 (50%) Frame = +2 Query: 212 ASGSRILHQTKPHTHEVHCSRERSRAAWKAIDEYLMPFVEKEKYELPS 355 AS R+ + HCS+++ +A+W+A +P + ++P+ Sbjct: 121 ASDGRLKRSSDDDGERCHCSKKKRKASWRARRRIRVPAISSRNADIPA 168
>AK111889:Os10g0160000 | Length = 931 Score = 30.0 bits (66), Expect = 3.5 Identities = 27/108 (25%), Positives = 41/108 (37%) Frame = +2 Query: 431 WRCGFCEKSFRAEKFIDQHFANRHNNLLDNSQGRCLADLCGALHCDLTMEFKKPKSKCND 610 W G + R K FA + + + LA L LH DL KKP + D Sbjct: 371 WSAGRTSIAPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKKKPYIEAKD 430 Query: 611 AAAARNRHRCESLADSCFPINQGHSASRLHEFFLHQFCDAHTCNGVSK 754 A + E LA+ C+ ++ + S + + F Q+ C K Sbjct: 431 ADGRPD----EELAEECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKK 474
>AK073768:Os11g0636900 | Length = 574 Score = 30.0 bits (66), Expect = 3.5 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = +2 Query: 218 GSRILHQTKPHTHEVHCSRERSRAAWKAIDEYLMPFVEKEK-YELPSKCRLRPENDMFRE 394 G R H+T+PH SRER R K +KE+ + R R D R+ Sbjct: 51 GGRSQHETQPHDGRSSKSRERERERDK----------DKERDRDRDRDRRDRDRGDKDRD 100 Query: 395 QEQHKIHFDVNEWR 436 +++H+ H D +E R Sbjct: 101 RDRHREHRDRSERR 114
>AK059255:Os11g0636900 | Length = 550 Score = 30.0 bits (66), Expect = 3.5 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = +2 Query: 218 GSRILHQTKPHTHEVHCSRERSRAAWKAIDEYLMPFVEKEK-YELPSKCRLRPENDMFRE 394 G R H+T+PH SRER R K +KE+ + R R D R+ Sbjct: 51 GGRSQHETQPHDGRSSKSRERERERDK----------DKERDRDRDRDRRDRDRGDKDRD 100 Query: 395 QEQHKIHFDVNEWR 436 +++H+ H D +E R Sbjct: 101 RDRHREHRDRSERR 114
>AK067522:Os05g0546800 | Length = 439 Score = 29.3 bits (64), Expect = 5.9 Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 17/119 (14%) Frame = +2 Query: 257 EVHCSRERSRAAWKAIDEYLMPFVEK----EKYELPSKCRLRPENDMFREQEQHKIHFDV 424 EVHC RE + A++ + F ++ E ++ R R +D H+ H Sbjct: 207 EVHCFREEDKPAFRKSKAQMARFYQRMIDIENNKIKQIFRPRVPSD------THEQHLTA 260 Query: 425 NEWRCGFCEKSFRAEKFIDQHFA----NRHNNLLDN---------SQGRCLADLCGALH 562 E F K ++ HFA N +NN+ +N C ++CG+ + Sbjct: 261 EEMEAEFAGKKVSSQAC---HFANLAINHYNNIEENIVKIELCTVLLSNCFHEICGSTY 316 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 38,291,003 Number of extensions: 927855 Number of successful extensions: 2533 Number of sequences better than 10.0: 13 Number of HSP's gapped: 2532 Number of HSP's successfully gapped: 13 Length of query: 407 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 304 Effective length of database: 11,275,632 Effective search space: 3427792128 Effective search space used: 3427792128 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
