ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf167b12 |
|---|---|
| Clone Library Name | barley_pub |
>Q9C912:R35A3_ARATH 60S ribosomal protein L35a-3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 112 Score = 197 bits (500), Expect = 4e-50 Identities = 91/112 (81%), Positives = 103/112 (91%) Frame = +2 Query: 86 MVKGRTGQRVRLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKA 265 MVKGR G+RVRLYVRGTILGYKRSKSN+Y SLVQIEGVNT+E+V WY GKRMAY+YKA Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60 Query: 266 KTKSNGTHYRCIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 KTK NG+HYRCIWGKV+RPHGN+GVVRAKFTSNLP ++MG +VRVFMYPS+I Sbjct: 61 KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
>Q9LMK0:R35A1_ARATH 60S ribosomal protein L35a-1 - Arabidopsis thaliana (Mouse-ear| cress) Length = 112 Score = 197 bits (500), Expect = 4e-50 Identities = 90/112 (80%), Positives = 103/112 (91%) Frame = +2 Query: 86 MVKGRTGQRVRLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKA 265 MVKGR G+RVRLYVRGTILGYKRSKSN+Y SLVQ+EGVNT E+V+WY GKRMAY+YKA Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60 Query: 266 KTKSNGTHYRCIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 KTK NG+HYRCIWGKV+RPHGN+GVVRAKFTSNLP ++MG +VRVFMYPS+I Sbjct: 61 KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
>P51422:R35A4_ARATH 60S ribosomal protein L35a-4 - Arabidopsis thaliana (Mouse-ear| cress) Length = 111 Score = 191 bits (484), Expect = 3e-48 Identities = 86/111 (77%), Positives = 102/111 (91%) Frame = +2 Query: 89 VKGRTGQRVRLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAK 268 +KGR G+RVRLYVRGT+LGYKRSKSN+Y SLVQIEGVNT+E+V WY GKR+AY+YKAK Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60 Query: 269 TKSNGTHYRCIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 TK NG+HYRCIWGKV+RPHGN+GVVR+KFTSNLP ++MG +VRVFMYPS+I Sbjct: 61 TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
>Q9FZH0:R35A2_ARATH 60S ribosomal protein L35a-2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 111 Score = 190 bits (483), Expect = 4e-48 Identities = 85/111 (76%), Positives = 102/111 (91%) Frame = +2 Query: 89 VKGRTGQRVRLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAK 268 +KGR G+RVRLYVRGT+LGYKRSKSN+Y SL+QIEGVNT+E+V WY GKR+AY+YKAK Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60 Query: 269 TKSNGTHYRCIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 TK NG+HYRCIWGKV+RPHGN+GVVR+KFTSNLP ++MG +VRVFMYPS+I Sbjct: 61 TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
>P05744:RL33A_YEAST 60S ribosomal protein L33-A - Saccharomyces cerevisiae (Baker's| yeast) Length = 107 Score = 115 bits (289), Expect = 1e-25 Identities = 55/102 (53%), Positives = 73/102 (71%) Frame = +2 Query: 116 RLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKTKSNGTHYR 295 RLYV+G L Y+RSK SL++IEGV T +D +Y GKR+AYVY+A + G+ R Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQDAQFYLGKRIAYVYRASKEVRGSKIR 65 Query: 296 CIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 +WGKV+R HGN+GVVRA F +NLPA+ G VR+F+YPS+I Sbjct: 66 VMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
>P41056:RL33B_YEAST 60S ribosomal protein L33-B - Saccharomyces cerevisiae (Baker's| yeast) Length = 107 Score = 114 bits (285), Expect = 3e-25 Identities = 54/102 (52%), Positives = 73/102 (71%) Frame = +2 Query: 116 RLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKTKSNGTHYR 295 RLYV+G L Y+RSK SL++IEGV T ++ +Y GKR+AYVY+A + G+ R Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGSKIR 65 Query: 296 CIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 +WGKV+R HGN+GVVRA F +NLPA+ G VR+F+YPS+I Sbjct: 66 VMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
>P02434:RL35A_XENLA 60S ribosomal protein L35a - Xenopus laevis (African clawed frog)| Length = 110 Score = 111 bits (277), Expect = 3e-24 Identities = 58/109 (53%), Positives = 75/109 (68%), Gaps = 7/109 (6%) Frame = +2 Query: 116 RLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKT-------K 274 RL+ + T GYKR N+ E +L++IEGV R++ +Y GKR AYVYKAK K Sbjct: 4 RLWCKATFAGYKRGLRNQREHTALLKIEGVYARDETEFYFGKRCAYVYKAKNNTVTPGGK 63 Query: 275 SNGTHYRCIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 N T R IWGKV+R HGN+G+VRAKF SNLPA+A+G ++RV +YPS I Sbjct: 64 PNRT--RVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>P49180:RL35A_CAEEL 60S ribosomal protein L35a - Caenorhabditis elegans| Length = 124 Score = 111 bits (277), Expect = 3e-24 Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 6/108 (5%) Frame = +2 Query: 116 RLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKA--KTKSNG-- 283 RLYV+ G+KR + E SL+++EGV +ED +Y GKR+ Y+YKA KT G Sbjct: 17 RLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYKAHNKTLKTGHT 76 Query: 284 --THYRCIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 T R IWGK++RPHGN G VRAKF N+P A+GK++RV +YPS+I Sbjct: 77 VATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSNI 124
>P04646:RL35A_RAT 60S ribosomal protein L35a - Rattus norvegicus (Rat)| Length = 110 Score = 108 bits (270), Expect = 2e-23 Identities = 57/109 (52%), Positives = 74/109 (67%), Gaps = 7/109 (6%) Frame = +2 Query: 116 RLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKT-------K 274 RL+ + GYKR N+ E +L++IEGV R++ +Y GKR AYVYKAK K Sbjct: 4 RLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGK 63 Query: 275 SNGTHYRCIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 N T R IWGKV+R HGN+G+VRAKF SNLPA+A+G ++RV +YPS I Sbjct: 64 PNKT--RVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>O55142:RL35A_MOUSE 60S ribosomal protein L35a - Mus musculus (Mouse)| Length = 110 Score = 108 bits (270), Expect = 2e-23 Identities = 57/109 (52%), Positives = 74/109 (67%), Gaps = 7/109 (6%) Frame = +2 Query: 116 RLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKT-------K 274 RL+ + GYKR N+ E +L++IEGV R++ +Y GKR AYVYKAK K Sbjct: 4 RLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGK 63 Query: 275 SNGTHYRCIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 N T R IWGKV+R HGN+G+VRAKF SNLPA+A+G ++RV +YPS I Sbjct: 64 PNKT--RVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>Q90YT3:RL35A_ICTPU 60S ribosomal protein L35a - Ictalurus punctatus (Channel catfish)| Length = 110 Score = 108 bits (270), Expect = 2e-23 Identities = 56/109 (51%), Positives = 75/109 (68%), Gaps = 7/109 (6%) Frame = +2 Query: 116 RLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKT-------K 274 RL+ + GYKR N+ E +L+++EGV +R +V +Y GKR AYVYKAK K Sbjct: 4 RLWCKAIFAGYKRGLRNQREHTALLKVEGVYSRNEVDFYLGKRCAYVYKAKKTTVTPGGK 63 Query: 275 SNGTHYRCIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 N T R IWGKV+R HGN+G+VRAKFTSNLP +A+G ++RV +YPS + Sbjct: 64 PNKT--RVIWGKVTRAHGNSGMVRAKFTSNLPPKAIGHRIRVMLYPSRV 110
>Q5R8K6:RL35A_PONPY 60S ribosomal protein L35a - Pongo pygmaeus (Orangutan)| Length = 110 Score = 108 bits (269), Expect = 2e-23 Identities = 57/109 (52%), Positives = 74/109 (67%), Gaps = 7/109 (6%) Frame = +2 Query: 116 RLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKT-------K 274 RL+ + GYKR N+ E +L++IEGV R++ +Y GKR AYVYKAK K Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGK 63 Query: 275 SNGTHYRCIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 N T R IWGKV+R HGN+G+VRAKF SNLPA+A+G ++RV +YPS I Sbjct: 64 PNKT--RVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>P61272:RL35A_MACFA 60S ribosomal protein L35a - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 110 Score = 108 bits (269), Expect = 2e-23 Identities = 57/109 (52%), Positives = 74/109 (67%), Gaps = 7/109 (6%) Frame = +2 Query: 116 RLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKT-------K 274 RL+ + GYKR N+ E +L++IEGV R++ +Y GKR AYVYKAK K Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGK 63 Query: 275 SNGTHYRCIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 N T R IWGKV+R HGN+G+VRAKF SNLPA+A+G ++RV +YPS I Sbjct: 64 PNKT--RVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>P18077:RL35A_HUMAN 60S ribosomal protein L35a - Homo sapiens (Human)| Length = 110 Score = 108 bits (269), Expect = 2e-23 Identities = 57/109 (52%), Positives = 74/109 (67%), Gaps = 7/109 (6%) Frame = +2 Query: 116 RLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKT-------K 274 RL+ + GYKR N+ E +L++IEGV R++ +Y GKR AYVYKAK K Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGK 63 Query: 275 SNGTHYRCIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 N T R IWGKV+R HGN+G+VRAKF SNLPA+A+G ++RV +YPS I Sbjct: 64 PNKT--RVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>Q56JY1:RL35A_BOVIN 60S ribosomal protein L35a - Bos taurus (Bovine)| Length = 110 Score = 107 bits (268), Expect = 3e-23 Identities = 56/109 (51%), Positives = 74/109 (67%), Gaps = 7/109 (6%) Frame = +2 Query: 116 RLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKT-------K 274 RL+ + GYKR N+ E +L++IEGV R++ +Y GKR AYVYKAK K Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGK 63 Query: 275 SNGTHYRCIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 N T R IWGK++R HGN+G+VRAKF SNLPA+A+G ++RV +YPS I Sbjct: 64 PNKT--RVIWGKITRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>Q9USX4:RL33A_SCHPO 60S ribosomal protein L33-A - Schizosaccharomyces pombe (Fission| yeast) Length = 108 Score = 107 bits (267), Expect = 4e-23 Identities = 50/102 (49%), Positives = 71/102 (69%) Frame = +2 Query: 116 RLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKTKSNGTHYR 295 RLYV+ L ++RSK + SLV+IEG +++E+ +Y GKR+ +VYK+ G+ R Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSLVKIEGCDSKEEAQFYLGKRICFVYKSNKPVRGSKIR 66 Query: 296 CIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 IWG VSRPHGN+GVVRA+FT NLP + G +RV +YPS++ Sbjct: 67 VIWGTVSRPHGNSGVVRARFTHNLPPKTFGASLRVMLYPSNV 108
>Q9USG6:RL33B_SCHPO 60S ribosomal protein L33-B - Schizosaccharomyces pombe (Fission| yeast) Length = 108 Score = 105 bits (263), Expect = 1e-22 Identities = 48/102 (47%), Positives = 70/102 (68%) Frame = +2 Query: 116 RLYVRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKTKSNGTHYR 295 RLYV+ L ++RSK + S+V+IEG +++E+ +Y GKR+ YVYK+ G+ R Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSIVKIEGCDSKEEAQFYLGKRVCYVYKSSKAVRGSKIR 66 Query: 296 CIWGKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRVFMYPSSI 421 IWG ++RPHGN+G VRA+F NLPA+ G +RV +YPS+I Sbjct: 67 VIWGTIARPHGNSGAVRARFVHNLPAKTFGSSLRVMLYPSNI 108
>P20299:RL35A_PYRWO 50S ribosomal protein L35Ae - Pyrococcus woesei| Length = 87 Score = 56.2 bits (134), Expect = 1e-07 Identities = 29/92 (31%), Positives = 52/92 (56%) Frame = +2 Query: 125 VRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKTKSNGTHYRCIW 304 ++G +L Y+RSK N++ +++ VN+RE+ + G+ + + K+ S + + Sbjct: 3 IKGVVLSYRRSKENQHNNVMIIKPLDVNSREEASKLIGRLVLW----KSPSG----KILK 54 Query: 305 GKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRV 400 GK+ R HG G VRA+F LP +A+G V + Sbjct: 55 GKIVRVHGTKGAVRARFEKGLPGQALGDYVEI 86
>Q8TZV6:RL35A_PYRFU 50S ribosomal protein L35Ae - Pyrococcus furiosus| Length = 87 Score = 56.2 bits (134), Expect = 1e-07 Identities = 29/92 (31%), Positives = 52/92 (56%) Frame = +2 Query: 125 VRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKTKSNGTHYRCIW 304 ++G +L Y+RSK N++ +++ VN+RE+ + G+ + + K+ S + + Sbjct: 3 IKGVVLSYRRSKENQHNNVMIIKPLDVNSREEASKLIGRLVLW----KSPSG----KILK 54 Query: 305 GKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRV 400 GK+ R HG G VRA+F LP +A+G V + Sbjct: 55 GKIVRVHGTKGAVRARFEKGLPGQALGDYVEI 86
>Q9V1P2:RL35A_PYRAB 50S ribosomal protein L35Ae - Pyrococcus abyssi| Length = 87 Score = 56.2 bits (134), Expect = 1e-07 Identities = 29/92 (31%), Positives = 52/92 (56%) Frame = +2 Query: 125 VRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKTKSNGTHYRCIW 304 ++G +L Y+RSK N++ +++ VN+RE+ + G+ + + K+ S + + Sbjct: 3 IKGVVLSYRRSKENQHTNVMIIKPLNVNSREEASKLIGRLVIW----KSPSG----KLLK 54 Query: 305 GKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRV 400 GK+ R HG G VRA+F LP +A+G V + Sbjct: 55 GKIVRVHGTKGAVRARFEKGLPGQALGDYVEI 86
>O74099:RL35A_PYRHO 50S ribosomal protein L35Ae - Pyrococcus horikoshii| Length = 87 Score = 55.8 bits (133), Expect = 1e-07 Identities = 28/92 (30%), Positives = 52/92 (56%) Frame = +2 Query: 125 VRGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKTKSNGTHYRCIW 304 ++G +L Y+RSK N++ +++ +N+RE+ + G+ + + K+ S + + Sbjct: 3 IKGVVLSYRRSKENQHTNVMIIKPLDINSREEASKLIGRLVVW----KSPSG----KVLK 54 Query: 305 GKVSRPHGNTGVVRAKFTSNLPAEAMGKKVRV 400 GK+ R HG G VRA+F LP +A+G V + Sbjct: 55 GKIVRVHGTRGAVRARFEKGLPGQALGDYVEI 86
>Q8TYY6:RL35A_METKA 50S ribosomal protein L35Ae - Methanopyrus kandleri| Length = 90 Score = 51.2 bits (121), Expect = 4e-06 Identities = 28/89 (31%), Positives = 44/89 (49%) Frame = +2 Query: 128 RGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGGKRMAYVYKAKTKSNGTHYRCIWG 307 RG I+ Y+ + + +++ EGV +R + A GK + + + K I G Sbjct: 6 RGVIVNYRMGRHTQDPRQCIIEFEGVESRSEAAQLIGKEVIWKHPETGK-------VIRG 58 Query: 308 KVSRPHGNTGVVRAKFTSNLPAEAMGKKV 394 KV HGN G VR +F LP +A+G +V Sbjct: 59 KVVDTHGNNGAVRVRFERGLPGQALGTEV 87
>Q9Y9G4:RL35A_AERPE 50S ribosomal protein L35Ae - Aeropyrum pernix| Length = 94 Score = 37.4 bits (85), Expect = 0.054 Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Frame = +2 Query: 128 RGTILGYKRSKSNRYETASLVQIEGVNTREDVAWYGG-----KRMAYVYKAKTKSNGTHY 292 RG +LGY+R + +Y +LV++ + R+ + G R VYK Sbjct: 5 RGVVLGYRRGTNTQYPQHALVKLLLDDPRKAGLYVSGIAFYRDRYGNVYK---------- 54 Query: 293 RCIWGKVSRPHGNT-GVVRAKFTSNLPAEAMGKKVRV 400 G+V R HG GVV KF LP +A G V V Sbjct: 55 ----GRVLRLHGRRGGVVVVKFNPPLPGQATGGVVEV 87
>Q9U7C9:NUCMR_DICDI Nucleomorphin - Dictyostelium discoideum (Slime mold)| Length = 756 Score = 30.8 bits (68), Expect = 5.0 Identities = 13/45 (28%), Positives = 27/45 (60%) Frame = -1 Query: 514 NSLSRTESILQDSK*KPKGRAKSSTLENNLLDAARVHEDPDLFPH 380 +S ++ +L+D PK + K S +N+LL+ + ++DP++ H Sbjct: 431 SSDNQDNELLRDEGTTPKSKKKFSQKKNHLLNLKKSYQDPEIIAH 475
>Q3SKP1:GLND_THIDA [Protein-PII] uridylyltransferase - Thiobacillus denitrificans| (strain ATCC 25259) Length = 850 Score = 30.4 bits (67), Expect = 6.6 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Frame = +1 Query: 103 RPAREALRPRHHPRIQEVQVEPVRDG------VACADRGG 204 +P R + RHHP V +E R G + CADRGG Sbjct: 754 QPGRLSRHQRHHPYPAAVHLEADRGGDGQVLSITCADRGG 793 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 89,862,225 Number of extensions: 1678535 Number of successful extensions: 4314 Number of sequences better than 10.0: 25 Number of HSP's gapped: 4301 Number of HSP's successfully gapped: 25 Length of query: 229 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 120 Effective length of database: 70,788,284 Effective search space: 8494594080 Effective search space used: 8494594080 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
