ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf173c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q26240:NOS_RHOPR Nitric-oxide synthase, salivary gland - Rhodniu... 30 8.0
2O60583:CCNT2_HUMAN Cyclin-T2 - Homo sapiens (Human) 30 8.0

>Q26240:NOS_RHOPR Nitric-oxide synthase, salivary gland - Rhodnius prolixus|
           (Triatomid bug)
          Length = 1174
 Score = 29.6 bits (65), Expect = 8.0
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -2

Query: 364 NLPLMYKYDLHADTILAQHNHRPKNLKHHASMESMEGGC 248
           N+ +++ + LH  TI+  H+     +KH  + + + GGC
Sbjct: 381 NVAVLHSFQLHNVTIVDHHSAAESFMKHLENEQRLRGGC 419



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>O60583:CCNT2_HUMAN Cyclin-T2 - Homo sapiens (Human)|
          Length = 730

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 18/35 (51%), Positives = 20/35 (57%)
 Frame = +2

Query: 371 TSRSSSNAKQYIRIHGSVH*FTASLCPPSPSFRQV 475
           +S SSS+ KQYI  H SV  F   L PP P   QV
Sbjct: 644 SSSSSSSVKQYISSHNSV--FNHPLPPPPPVTYQV 676


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 89,404,009
Number of extensions: 1697253
Number of successful extensions: 4131
Number of sequences better than 10.0: 2
Number of HSP's gapped: 4129
Number of HSP's successfully gapped: 2
Length of query: 192
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 85
Effective length of database: 71,336,874
Effective search space: 6063634290
Effective search space used: 6063634290
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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