ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf173a06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os10g0351300:Os10g0351300 45 6e-05
2AK073769:Os01g0303200 29 6.3
3Os07g0686400:Os07g0686400 28 8.2

>Os10g0351300:Os10g0351300 |
          Length = 1780
 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 23/79 (29%), Positives = 43/79 (54%)
 Frame = +3

Query: 144 PGIELNMQALSIQDPNVLHIQAQQKEENQDQDAQFNILMKFAATG*SPRVLSLNSVQLAM 323
           P I  +++A++I     + ++ QQ  E     A  N+LMK   +G   R + L +++ +M
Sbjct: 180 PEIATSLEAMTITPTKEIRVRLQQSPETATVQATHNLLMKVGHSGGQQRQIPLEALKKSM 239

Query: 324 ARVWRDNYHGISQLSRSLW 380
           A+ W+  Y  ISQ+  +L+
Sbjct: 240 AKAWQRVYLDISQVESNLF 258



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>AK073769:Os01g0303200 |
          Length = 967

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 850 EANYIWSGNTSVVGGSKVMFVGNIVK 927
           E   IWS ++SVVGG    F GN+VK
Sbjct: 630 EKALIWSWDSSVVGGLGGKFEGNLVK 655



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>Os07g0686400:Os07g0686400 |
          Length = 926

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = +3

Query: 201 IQAQQKEENQDQDAQFNILMKFAATG*SPRVLSLNSVQLAMARVWRDNYHGISQLSRS-- 374
           +Q+   E    +     +L +  +TG  PR+ S+   Q  +ARV     HG+S L ++  
Sbjct: 609 VQSCHLESESLRQENIALLNRIQSTGNGPRLSSIRLDQELLARVDNLQIHGLSLLDKTSQ 668

Query: 375 LWSKFLQL 398
           L  K L+L
Sbjct: 669 LCIKLLEL 676


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 31,284,423
Number of extensions: 722006
Number of successful extensions: 1552
Number of sequences better than 10.0: 3
Number of HSP's gapped: 1552
Number of HSP's successfully gapped: 3
Length of query: 347
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 246
Effective length of database: 11,355,714
Effective search space: 2793505644
Effective search space used: 2793505644
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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