ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf169p15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK104841:Os09g0541700 251 3e-67
2AK064928:Os09g0541700 251 3e-67
3AK066896:Os03g0270200 30 1.6
4AK065622:Os07g0168000 30 1.6
5AK060809:Os03g0270200 30 1.6
6AK070220:Os07g0102000 30 2.1
7Os09g0473900:Os09g0473900 29 2.7
8Os10g0510300:Os10g0510300 28 6.1
9Os08g0248500:Os08g0248500 28 6.1
10AK119438:Os05g0540100 28 7.9
11AK068853:Os03g0574900 28 7.9 
>AK104841:Os09g0541700 |
          Length = 194
 Score =  251 bits (641), Expect = 3e-67
 Identities = 135/172 (78%), Positives = 141/172 (81%), Gaps = 5/172 (2%)
 Frame = +2

Query: 11  ASHAPELA--FPPVNRKGGVSL---RRRGARHGVRAEVNESASALAIDALSQVKHVLLPI 175
           AS APELA   PP  ++G VSL   RRRGAR GVRAEVNES SALA DA +QVKHVLLP+
Sbjct: 13  ASVAPELASFLPPQAKRGAVSLAATRRRGARIGVRAEVNESGSALAADAFAQVKHVLLPV 72

Query: 176 TDRNPYLSEGTRQAAATTTSLAKKYGASITVVVIDDKPKESFPEHDTQMSSIRWHLSEGG 355
           TDRNPYLSEGTRQAAAT+ SLAKKYGA+ITVVVIDDKPKE FPEHDTQMSSIRWHLSEGG
Sbjct: 73  TDRNPYLSEGTRQAAATSASLAKKYGANITVVVIDDKPKEEFPEHDTQMSSIRWHLSEGG 132

Query: 356 FTEFGLMERLGEGKKPTAIIXXXXXXXXXXXXXXSMEAIHSKQVDGNLLAEF 511
           FTEFGLMERLGEGKKPTAII              SMEAIHSK VDGNLLAEF
Sbjct: 133 FTEFGLMERLGEGKKPTAIIGEVADELELDLVVLSMEAIHSKHVDGNLLAEF 184
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>AK064928:Os09g0541700 |
          Length = 194

 Score =  251 bits (641), Expect = 3e-67
 Identities = 135/172 (78%), Positives = 141/172 (81%), Gaps = 5/172 (2%)
 Frame = +2

Query: 11  ASHAPELA--FPPVNRKGGVSL---RRRGARHGVRAEVNESASALAIDALSQVKHVLLPI 175
           AS APELA   PP  ++G VSL   RRRGAR GVRAEVNES SALA DA +QVKHVLLP+
Sbjct: 13  ASVAPELASFLPPQAKRGAVSLAATRRRGARIGVRAEVNESGSALAADAFAQVKHVLLPV 72

Query: 176 TDRNPYLSEGTRQAAATTTSLAKKYGASITVVVIDDKPKESFPEHDTQMSSIRWHLSEGG 355
           TDRNPYLSEGTRQAAAT+ SLAKKYGA+ITVVVIDDKPKE FPEHDTQMSSIRWHLSEGG
Sbjct: 73  TDRNPYLSEGTRQAAATSASLAKKYGANITVVVIDDKPKEEFPEHDTQMSSIRWHLSEGG 132

Query: 356 FTEFGLMERLGEGKKPTAIIXXXXXXXXXXXXXXSMEAIHSKQVDGNLLAEF 511
           FTEFGLMERLGEGKKPTAII              SMEAIHSK VDGNLLAEF
Sbjct: 133 FTEFGLMERLGEGKKPTAIIGEVADELELDLVVLSMEAIHSKHVDGNLLAEF 184
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>AK066896:Os03g0270200 |
          Length = 840

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 7   PREPRPGARLPAGQQEGRRLAAAP-GSP 87
           PR P PG R P  +  GRR + +P GSP
Sbjct: 384 PRSPSPGRRRPRSRSPGRRRSPSPRGSP 411



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 7   PREPRPGARLPAGQQEGRRLAAAPGSPAR 93
           PR P PG R P     GRR   +P SP R
Sbjct: 344 PRSPSPGRRRPRSPSPGRRRPRSP-SPGR 371



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 7   PREPRPGARLPAGQQEGRRLAAAPGSPAR 93
           PR P PG R P     GRR   +P SP R
Sbjct: 354 PRSPSPGRRRPRSPSPGRRRPRSP-SPGR 381



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 7   PREPRPGARLPAGQQEGRRLAAAPGSPAR 93
           PR P PG R P     GRR   +P SP R
Sbjct: 364 PRSPSPGRRRPRSPSPGRRRPRSP-SPGR 391
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>AK065622:Os07g0168000 |
          Length = 902

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 9/132 (6%)
 Frame = +2

Query: 47  NRKGGVSLRRRGARHGVRAEVNESASALAIDALSQVK-----HVLLPITDRNPYLSEG-- 205
           +R+GG   RRR A   VRA V E A  +  +  S           +P+ DR+  +  G  
Sbjct: 51  SRRGGA--RRRAAGARVRASVGEEAPPVVTEEASTSGGPTKFSTKIPVGDRHILVETGHI 108

Query: 206 TRQAAAT--TTSLAKKYGASITVVVIDDKPKESFPEHDTQMSSIRWHLSEGGFTEFGLME 379
            RQA+A+   T       +S+ +    + P + FP         +  LS  G T  G  +
Sbjct: 109 GRQASASVMVTDGETIVYSSVCLADTPNDPSDFFP----MSVHYQERLSAAGRTSGGFFK 164

Query: 380 RLGEGKKPTAII 415
           R G  K    ++
Sbjct: 165 REGRAKDHEVLV 176
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>AK060809:Os03g0270200 |
          Length = 580

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 7   PREPRPGARLPAGQQEGRRLAAAP-GSP 87
           PR P PG R P  +  GRR + +P GSP
Sbjct: 124 PRSPSPGRRRPRSRSPGRRRSPSPRGSP 151



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 7   PREPRPGARLPAGQQEGRRLAAAPGSPAR 93
           PR P PG R P     GRR   +P SP R
Sbjct: 84  PRSPSPGRRRPRSPSPGRRRPRSP-SPGR 111



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 7   PREPRPGARLPAGQQEGRRLAAAPGSPAR 93
           PR P PG R P     GRR   +P SP R
Sbjct: 94  PRSPSPGRRRPRSPSPGRRRPRSP-SPGR 121



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 7   PREPRPGARLPAGQQEGRRLAAAPGSPAR 93
           PR P PG R P     GRR   +P SP R
Sbjct: 104 PRSPSPGRRRPRSPSPGRRRPRSP-SPGR 131
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>AK070220:Os07g0102000 |
          Length = 196

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 218 AATTTSLAKKYGASITVVVIDD 283
           AA  TS+ +KYGA I V ++DD
Sbjct: 20  AAVATSMLRKYGAQIGVAILDD 41
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>Os09g0473900:Os09g0473900 |
          Length = 1685

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 8   RASHAPELAFPPVNRKGGVSLRRRGARHGVRAEVNE 115
           RA  +PELA  P  + G +S  RR   HGV+  V +
Sbjct: 136 RAGGSPELARGPRRQHGSLSPDRRHGHHGVQTVVRD 171
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>Os10g0510300:Os10g0510300 |
          Length = 375

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +2

Query: 5   IRASHAPELAFPPVNRKGGVSLRRRGARHGVR 100
           +RAS A  LA P + R+  + L RRGA H +R
Sbjct: 49  LRASPAEPLALPGLARRLPLRLHRRGALHFLR 80
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>Os08g0248500:Os08g0248500 |
          Length = 1827

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2

Query: 8   RASHAPELAFPPVNRKGGVSLRRRGARHGVRAEVNE 115
           RA  +PE A  P  R G +S  RR   HGV+  V +
Sbjct: 136 RAGGSPEPARGPRRRHGSLSPDRRHGHHGVQTVVRD 171
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>AK119438:Os05g0540100 |
          Length = 531

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 87  RAPRRRSETPPFLLTGGKASSGAWLARMP 1
           RAPRRR  +P  ++ G   S G  + R P
Sbjct: 151 RAPRRRRRSPDVVVVGAAGSPGLQVPRRP 179
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>AK068853:Os03g0574900 |
          Length = 811

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
 Frame = +2

Query: 83  ARHGVRAEVNESASALAIDALSQ-----VKHVLLPITDRNPYLSEGTRQAAATTTSLAKK 247
           AR+G R  + E+     +DAL++     ++ V    T  + ++   T  A++   S A  
Sbjct: 632 ARYGYRDPMEEAKDF--VDALTENLQYYIRDVNFYTTGGDQHIFRSTSYASSIAESFASY 689

Query: 248 YGASITVVVIDDK--PKESFPEHDTQMSSIRWHLSE 349
              S   V  ++   P ESF EH  Q+S    H  +
Sbjct: 690 EKHSGHAVYAEEMLTPAESFSEHTKQLSGRSKHFKQ 725


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 19,211,390
Number of extensions: 443857
Number of successful extensions: 1539
Number of sequences better than 10.0: 12
Number of HSP's gapped: 1538
Number of HSP's successfully gapped: 19
Length of query: 234
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 137
Effective length of database: 11,515,878
Effective search space: 1577675286
Effective search space used: 1577675286
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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