ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf172n18 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g68950:12001.t06249:unspliced-genomic ubiquitin-like protein SMT3, putative, expressed| Length = 2335 Score = 124 bits (266), Expect(3) = 6e-45 Identities = 52/56 (92%), Positives = 54/56 (96%) Frame = +3 / +2 Query: 864 SLVLQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDEV 1031 S VL DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLFDGRRLRGEQTPDEV Sbjct: 1430 SFVL*DGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDEV 1597 Score = 54.7 bits (113), Expect(3) = 6e-45 Identities = 21/24 (87%), Positives = 22/24 (91%) Frame = +3 / +1 Query: 1113 CKLF*LEMEEGDEIDAMLHQTGGC 1184 CKL LEME+GDEIDAMLHQTGGC Sbjct: 1678 CKLVQLEMEDGDEIDAMLHQTGGC 1749 Score = 49.6 bits (102), Expect(3) = 6e-45 Identities = 20/38 (52%), Positives = 26/38 (68%) Frame = +3 / +1 Query: 81 ARHSTEESPEMSGVTADEDKKPAGDGGGAHINLKVKGQ 194 A ++E + EMS ++ K G+GGGAHINLKVKGQ Sbjct: 103 AARASERACEMSAAGEEDKKPAGGEGGGAHINLKVKGQ 216 Score = 102 bits (218), Expect(3) = 1e-35 Identities = 46/56 (82%), Positives = 47/56 (83%) Frame = -3 / -2 Query: 1030 TSSGVCSPRSLRPSKRNAMELRSTDWRSQ*AFISFLSCVDLLMRKKTSLPSCRTKE 863 TSSGVCSPRSLRPS RNA+ STD RSQ*AFISF SCVDLLMRK TS PS RTKE Sbjct: 1596 TSSGVCSPRSLRPSNRNAIAFISTD*RSQ*AFISFFSCVDLLMRKNTSFPSYRTKE 1429 Score = 55.1 bits (114), Expect(3) = 1e-35 Identities = 22/31 (70%), Positives = 23/31 (74%) Frame = -3 / -3 Query: 199 QTCPLTLRLMWAPPPSPAGFLSSSAVTPDIS 107 QTCPLTLRLMWAPPPSP SS+ DIS Sbjct: 221 QTCPLTLRLMWAPPPSPPAGFLSSSPAADIS 129 Score = 39.6 bits (80), Expect(3) = 1e-35 Identities = 15/29 (51%), Positives = 22/29 (75%) Frame = -2 / -2 Query: 1199 LSATKAPSSLVQHGINLIAFFHLKLKQFA 1113 L +A SSLV+HG++L+ FHL+L +FA Sbjct: 1764 LLGRQAASSLVEHGVDLVPVFHLELNKFA 1678 Score = 94.5 bits (200), Expect(2) = 2e-24 Identities = 38/61 (62%), Positives = 45/61 (73%) Frame = +2 / +1 Query: 872 SAGWQ*GFLPHQEIHTAQEADECLL*PPVCGSQFHCVPF*WS*APW*ADPRRGMLLLCQH 1051 S GW+ G LPHQEI+ A+EADE LL*P VCG + +C+P *WS*APW ADP RG L+ Sbjct: 1438 SVGWERGILPHQEIYAAEEADERLL*PSVCGYECYCIPI*WS*APWRADP*RGA*LIFSS 1617 Query: 1052 Y 1054 Y Sbjct: 1618 Y 1620 Score = 38.6 bits (78), Expect(2) = 2e-24 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = +1 / +2 Query: 1102 IILFANCFSLRWKKAMRLMPCCTRLEGA 1185 ++ AN FS RWK R PC TRLE A Sbjct: 1667 LMTIANLFSSRWKTGTRSTPCSTRLEAA 1750 Score = 88.1 bits (186), Expect(3) = 8e-22 Identities = 39/57 (68%), Positives = 45/57 (78%) Frame = -2 / -1 Query: 1037 AAYLVGGLLTTEPTTIKKERNGIEIHRLAVTVGIHQLLELCGSLDAEENLIAILQNQ 867 A +LV GLL TEPTTIK E N I IHRL VT+G+HQLL+L SLDAEE L+ ILQN+ Sbjct: 1603 ATHLVRGLLATEPTTIK*ECNSIHIHRLTVTIGVHQLLQLRRSLDAEEYLVPILQNK 1433 Score = 36.3 bits (73), Expect(3) = 8e-22 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -1 / -1 Query: 1200 SKRDESTLQSGAAWHQSHRLLPSQAKTIC 1114 + R +LQSG AW +S LPS+A+ +C Sbjct: 1765 ASRQAGSLQSGGAWRRSRPRLPSRAEQVC 1679 Score = 26.3 bits (51), Expect(3) = 8e-22 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = -3 / -3 Query: 163 PPPSPAGFLSSS 128 PP PAGFLSSS Sbjct: 182 PPSPPAGFLSSS 147 Score = 48.7 bits (100), Expect(3) = 1e-08 Identities = 22/35 (62%), Positives = 25/35 (71%) Frame = +1 / +3 Query: 940 PTVTASLWISIPLRSFLMVVGSVVSRPPTRYAAVM 1044 P VT SLWI + L S+LMVVGSV SRP TR A + Sbjct: 1506 PIVTVSLWI*MLLHSYLMVVGSVASRPLTRCVAYL 1610 Score = 30.9 bits (61), Expect(3) = 1e-08 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = +2 / +3 Query: 1112 LQIVLA*DGRRR*D*CHAAPDWRV 1183 LQ A DGRR D HA PDWR+ Sbjct: 1677 LQTCSARDGRRGRDRRHAPPDWRL 1748 Score = 25.4 bits (49), Expect(3) = 1e-08 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +3 / +1 Query: 129 DEDKKPAGDGGG 164 +EDKKPAG GG Sbjct: 148 EEDKKPAGGEGG 183 Score = 42.3 bits (86), Expect(3) = 2e-07 Identities = 18/28 (64%), Positives = 20/28 (71%) Frame = -1 / -3 Query: 1038 SSIPRRGSAHHGAYDHQKGTQWN*DPQT 955 S PR+GSA HGAYDHQ G Q + PQT Sbjct: 1604 SYAPRQGSARHGAYDHQIGMQ*HSYPQT 1521 Score = 28.1 bits (55), Expect(3) = 2e-07 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -1 / -3 Query: 912 IS*CGRKPHCHPAEPKR 862 IS*CGR P HP E ++ Sbjct: 1478 IS*CGRIPRSHPTEQRK 1428 Score = 22.1 bits (42), Expect(3) = 2e-07 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = -3 / -3 Query: 1186 KHPPVWCSMA 1157 + PPVW SMA Sbjct: 1751 RQPPVWWSMA 1722
>LOC_Os01g68940:12001.t06248:unspliced-genomic ubiquitin-like protein SMT3, putative, expressed| Length = 2189 Score = 117 bits (250), Expect(3) = 2e-38 Identities = 50/59 (84%), Positives = 52/59 (88%) Frame = +3 / +3 Query: 855 TCPSLVLQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDEV 1031 T LVL DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+ SIAFLFDGRRL EQTPD+V Sbjct: 1431 TLSFLVL*DGNEVFFRIKRSTQLKKLMNAYCDRQSVDIKSIAFLFDGRRLNAEQTPDQV 1607 Score = 45.5 bits (93), Expect(3) = 2e-38 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = +3 / +2 Query: 1122 F*LEMEEGDEIDAMLHQTGG 1181 F LEME+GDEIDAMLHQTGG Sbjct: 1715 FQLEMEDGDEIDAMLHQTGG 1774 Score = 44.1 bits (90), Expect(3) = 2e-38 Identities = 17/22 (77%), Positives = 18/22 (81%) Frame = +3 / +2 Query: 129 DEDKKPAGDGGGAHINLKVKGQ 194 DE K G+GGGAHINLKVKGQ Sbjct: 134 DEKKPAGGEGGGAHINLKVKGQ 199 Score = 90.4 bits (191), Expect(3) = 2e-30 Identities = 41/59 (69%), Positives = 46/59 (77%) Frame = -3 / -2 Query: 1030 TSSGVCSPRSLRPSKRNAMELRSTDWRSQ*AFISFLSCVDLLMRKKTSLPSCRTKEGQV 854 T SGVCS SLRPS R A++L STDWRSQ*AFISF S VDLL+RK TSLPS T+ +V Sbjct: 1606 TWSGVCSALSLRPSNRKAIDLISTDWRSQ*AFISFFSWVDLLIRKNTSLPSYSTRNDKV 1430 Score = 51.5 bits (106), Expect(3) = 2e-30 Identities = 21/34 (61%), Positives = 23/34 (67%) Frame = -3 / -3 Query: 214 GNGLDQTCPLTLRLMWAPPPSPAGFLSSSAVTPD 113 G G +TCPLTLRLMWAPPPSP SS+ D Sbjct: 219 GAGGKRTCPLTLRLMWAPPPSPPAGFFSSSPAGD 118 Score = 38.2 bits (77), Expect(3) = 2e-30 Identities = 16/30 (53%), Positives = 19/30 (63%) Frame = -1 / -1 Query: 1212 QQHPSKRDESTLQSGAAWHQSHRLLPSQAK 1123 Q H S R + QSG AW QS R LPS+A+ Sbjct: 1805 QLHMSSRQAESPQSGEAWRQSRRRLPSRAE 1716 Score = 80.3 bits (169), Expect(3) = 5e-20 Identities = 34/55 (61%), Positives = 46/55 (83%) Frame = -2 / -1 Query: 1031 YLVGGLLTTEPTTIKKERNGIEIHRLAVTVGIHQLLELCGSLDAEENLIAILQNQ 867 +LV GLL+ EPTTIK+E N +IH LA+TVG+HQLL+L SLD +E+L+AILQ++ Sbjct: 1607 HLVRGLLSIEPTTIKQEGNRFDIHGLAITVGVHQLLQLG*SLDTKEHLVAILQHK 1443 Score = 36.8 bits (74), Expect(3) = 5e-20 Identities = 13/18 (72%), Positives = 17/18 (94%) Frame = -2 / -2 Query: 1175 SLVQHGINLIAFFHLKLK 1122 SLV+HG+NL+A FHL+LK Sbjct: 1768 SLVKHGVNLVAVFHLELK 1715 Score = 27.2 bits (53), Expect(3) = 5e-20 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = -3 / -3 Query: 163 PPPSPAGFLSSSAVTPDI 110 PP PAGF SSS DI Sbjct: 165 PPSPPAGFFSSSPAGDDI 112 Score = 67.5 bits (141), Expect(2) = 2e-15 Identities = 30/50 (60%), Positives = 36/50 (72%) Frame = +2 / +2 Query: 872 SAGWQ*GFLPHQEIHTAQEADECLL*PPVCGSQFHCVPF*WS*APW*ADP 1021 + GWQ G L +QEI+ +EADE LL* PV G Q +C+P *WS*A *ADP Sbjct: 1448 AVGWQRGVLSYQEINPTEEADERLL*SPVRGYQIYCLPV*WS*AQC*ADP 1597 Score = 35.4 bits (71), Expect(2) = 2e-15 Identities = 16/35 (45%), Positives = 18/35 (51%) Frame = +1 / +3 Query: 1123 FSLRWKKAMRLMPCCTRLEGAFVALRRMLLQPGCS 1227 FS RWK A RL PC TRL + M L C+ Sbjct: 1716 FSSRWKTATRLTPCFTRLGALCLPRAHMKLLQQCN 1820 Score = 43.7 bits (89), Expect(2) = 7e-08 Identities = 21/30 (70%), Positives = 23/30 (76%) Frame = +1 / +1 Query: 940 PTVTASLWISIPLRSFLMVVGSVVSRPPTR 1029 PTV AS WIS L S LMVVGS++SRP TR Sbjct: 1516 PTVIASPWISNLLPSCLMVVGSMLSRPLTR 1605 Score = 33.6 bits (67), Expect(2) = 7e-08 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +2 / +1 Query: 1118 IVLA*DGRRR*D*CHAAPDW 1177 ++ A DGRRR D* HA+PDW Sbjct: 1711 LISARDGRRRRD*RHASPDW 1770 Score = 33.6 bits (67), Expect = 3.1 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = -1 / -3 Query: 1029 PRRGSAHHGAYDHQKGTQWN*DPQT 955 P +GSA H AYDHQ G Q * P+T Sbjct: 1605 PGQGSAQH*AYDHQTGRQ*I*YPRT 1531
>LOC_Os01g63290:12001.t05698:unspliced-genomic sialin, putative, expressed| Length = 8085 Score = 37.7 bits (76), Expect(2) = 3e-04 Identities = 13/38 (34%), Positives = 25/38 (65%) Frame = +3 / -3 Query: 888 EVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRR 1001 +V+F IK +L+++M+ YC + S+D ++ F+ D R Sbjct: 3826 DVYFAIKPRVKLRRVMDLYCGKHSLDPKTVKFIDDDGR 3713 Score = 27.2 bits (53), Expect(2) = 3e-04 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +3 / -3 Query: 990 DGRRLRGEQTPDEV 1031 DGR +R EQTP+EV Sbjct: 3721 DGRFVRSEQTPEEV 3680
>LOC_Os07g38660:12007.t03530:unspliced-genomic ubiquitin-like protein SMT3, putative| Length = 393 Score = 35.4 bits (71), Expect(2) = 0.029 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = +3 / +1 Query: 981 FLFDGRRLRGEQTPDEV 1031 FLFDGRRLRG QTP E+ Sbjct: 247 FLFDGRRLRGWQTPAEL 297 Score = 22.6 bits (43), Expect(2) = 0.029 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +3 / +1 Query: 1128 LEMEEGDEIDAMLHQTGG 1181 L+ME+GDE++ GG Sbjct: 295 LQMEDGDEVNFFEELIGG 348 Score = 33.6 bits (67), Expect = 3.1 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 1030 TSSGVCSPRSLRPSKRNAMELRST 959 +S+GVC PRS RPS RN R T Sbjct: 296 SSAGVCQPRSRRPSNRNRPVPRCT 225
>LOC_Os07g38690:12007.t03533:unspliced-genomic ubiquitin-like protein SMT3, putative, expressed| Length = 596 Score = 31.3 bits (62), Expect(2) = 0.094 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = +3 / +1 Query: 981 FLFDGRRLRGEQTPDEV 1031 FL+DGRRL G QTP E+ Sbjct: 286 FLYDGRRLSGWQTPAEL 336 Score = 24.9 bits (48), Expect(2) = 0.094 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +3 / +1 Query: 1128 LEMEEGDEIDAMLHQTGG 1181 L+ME+GDE+D GG Sbjct: 334 LDMEDGDEVDFFEELIGG 387
>LOC_Os07g23770:12007.t02074:unspliced-genomic hypothetical protein| Length = 1188 Score = 37.7 bits (76), Expect = 0.18 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -1 / -2 Query: 315 KSTALPTPILGSDRHQPQREPVSP*RKGEGKTRRGTDWIRPAP 187 K + TPI GS RH Q + P + EG+ + +WIR P Sbjct: 428 KLSVYDTPITGSKRHDTQHTSLHPHLRVEGEEGKREEWIRSLP 300
>LOC_Os06g49860:12006.t04670:unspliced-genomic ankyrin-like protein, putative, expressed| Length = 3666 Score = 36.8 bits (74), Expect = 0.34 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = -1 / +2 Query: 357 QAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREPVSP*RKGEGKTRR 214 Q+ RRR R P K+ P + R + +R+P++P R+ G TRR Sbjct: 1001 QSGRRRWSTRSPARKTARRCPPPASTSRTRGRRKPITPTRRKTGATRR 1144
>LOC_Os11g05600:12011.t00452:unspliced-genomic expressed protein| Length = 3213 Score = 35.9 bits (72), Expect = 0.64 Identities = 16/45 (35%), Positives = 19/45 (42%) Frame = -1 / -2 Query: 381 RLQSHASKQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREPVS 247 R H + HRRR R RD + P GSD H P P + Sbjct: 416 RRYPHRRRLRHRRRGRRRDQGQRGGLRDRPRRGSDGHAPAPAPAA 282
>LOC_Os01g60860:12001.t05467:unspliced-genomic spotted leaf protein 11, putative, expressed| Length = 2493 Score = 35.9 bits (72), Expect = 0.64 Identities = 19/58 (32%), Positives = 27/58 (46%) Frame = -1 / -2 Query: 375 QSHASKQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREPVSP*RKGEGKTRRGTDW 202 + S ++ RRR R D + T PT G+ R QP+R+P + K E G W Sbjct: 1073 RDRTSGRSRRRRGRALDRERLGTGSPTAAPGARRLQPRRQPWNWNLKAEAWR*TGRTW 900
>LOC_Os11g01850:12011.t00082:unspliced-genomic SAG20, putative, expressed| Length = 2238 Score = 30.9 bits (61), Expect(2) = 0.71 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = -1 / -3 Query: 381 RLQSHASKQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREP 253 RLQ H ++A R SRNR A P P + R R P Sbjct: 1597 RLQRHRQQEASCRTSRNRCGRGSPCAPPAPAHTASRRATGRSP 1469 Score = 22.1 bits (42), Expect(2) = 0.71 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = -3 / -2 Query: 565 NNPTLSLSSGRVIKIDDGSVKLLDYASDPSLKHYKHISRTCTAGP*LSS 419 ++ T++ SGR + S L +SD S + TCTAG +SS Sbjct: 1853 SSSTITTDSGRGEPMIFSS*TALHSSSDLSPSTTTCSTTTCTAGGTISS 1707
>LOC_Os09g38870:12009.t03354:unspliced-genomic conserved hypothetical protein| Length = 2921 Score = 35.4 bits (71), Expect = 0.87 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +3 / +2 Query: 867 LVLQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 989 + L +G +F IKR QLK CD Q ++L I F F Sbjct: 2036 MTLLEGEIDWFEIKRIKQLKDRTTELCDNQPMELGDITFEF 2158
>LOC_Os09g30458:12009.t02729:unspliced-genomic subtilisin-like protein, putative, expressed| Length = 5383 Score = 33.6 bits (67), Expect(2) = 0.98 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -3 / +1 Query: 178 RLMWAPPPSPAGFLSSSAVTPDISGDSS 95 R W+PPPSPA ++ A TP + SS Sbjct: 4828 RSSWSPPPSPAASAAAPAATPATARTSS 4911 Score = 24.9 bits (48), Expect(2) = 0.98 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = -1 / +2 Query: 1032 IPRRGSAHHG 1003 +PRRG HHG Sbjct: 2930 VPRRGQGHHG 2959
>LOC_Os03g55389:12003.t04803:unspliced-genomic casein kinase II subunit alpha-1, putative, expressed| Length = 5648 Score = 34.5 bits (69), Expect = 1.7 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +1 / +3 Query: 1081 SLYHC*CIILFANCFSLRWKKAMRLMPC 1164 ++ C C + F NC SLRW + M + C Sbjct: 5529 TIVECACSLAFVNCNSLRWLRLMNAVTC 5612
>LOC_Os02g43070:12002.t03892:unspliced-genomic conserved hypothetical protein| Length = 1242 Score = 34.5 bits (69), Expect = 1.7 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -1 / -3 Query: 402 RLGKWIYRLQSHASKQAHRRRSRNRDPDSKSTALPTPIL 286 RL + + + H S++A +RRSR R P S S P P L Sbjct: 877 RLRRPTHPRRRHVSRRARKRRSRGR*PSSSSPPPPKPTL 761
>LOC_Os11g13990:12011.t01233:unspliced-genomic nucleoside-triphosphatase/ nucleotide binding protein, putative,| expressed Length = 9073 Score = 34.1 bits (68), Expect = 2.3 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +2 / +2 Query: 725 SYVSGKS*LGQDQEINWFYCFIVSLSPFFSQQAICVYSMPSY 850 S + G L + E+N +Y + L+PFF +C S+PS+ Sbjct: 6674 SVIMGS*HLSKTMEVNLYYECSLVLAPFFVLSLVCFTSLPSF 6799
>LOC_Os04g45470:12004.t04081:unspliced-genomic vacuolar processing enzyme, beta-isozyme precursor, putative,| expressed Length = 4814 Score = 34.1 bits (68), Expect = 2.3 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -1 / -2 Query: 372 SHASKQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREPVSP 244 S + + RRSR R P + S P P QPQR P+ P Sbjct: 298 SPGAGSSRSRRSRRRAPPTSSPRNPPPQEQEREQQPQRRPLPP 170
>LOC_Os03g01470:12003.t00044:unspliced-genomic expressed protein| Length = 1517 Score = 34.1 bits (68), Expect = 2.3 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -1 / -2 Query: 375 QSHASKQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREPVSP 244 +S + ++ H RR R R PD+ + LPTP P P P Sbjct: 421 RSASGRRNHLRRCRIRHPDANPSPLPTPPSSPSPPPPPSSPFRP 290
>LOC_Os02g54560:12002.t05035:unspliced-genomic pathogenesis-related protein PR-1 precursor, putative, expressed| Length = 1611 Score = 34.1 bits (68), Expect = 2.3 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 / -3 Query: 1047 WHNSSIPRRGSAHHGAYDHQKG 982 W ++ PRR +AHH AYD +G Sbjct: 1117 WRSAQSPRRCAAHHRAYDSSRG 1052
>LOC_Os04g41229:12004.t03684:unspliced-genomic DNA binding protein, putative, expressed| Length = 7802 Score = 25.8 bits (50), Expect(2) = 2.8 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +2 / +3 Query: 674 MCAVFFFYFFIC 709 +C FFF+FF C Sbjct: 765 LCLYFFFFFFYC 800 Score = 24.9 bits (48), Expect(2) = 2.8 Identities = 12/37 (32%), Positives = 17/37 (45%) Frame = +2 / +3 Query: 773 WFYCFIVSLSPFFSQQAICVYSMPSY*HLSLFGSAGW 883 +FYC S FSQ ++ + *+LS F W Sbjct: 789 FFYCDFFSYGAMFSQV*SWLFFLSFS*YLSAFDECFW 899
>LOC_Os12g25680:12012.t02287:unspliced-genomic cysteine protease, putative| Length = 2342 Score = 33.6 bits (67), Expect = 3.1 Identities = 20/57 (35%), Positives = 26/57 (45%) Frame = -1 / -2 Query: 381 RLQSHASKQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREPVSP*RKGEGKTRRG 211 R A ++ RRR R + ALPT +L R P PV+P R G+ R G Sbjct: 232 RSPPRAPARSPRRRRERRPSAPAADALPTALLPRRRPPPPDLPVAPWRLEGGEGRDG 62
>LOC_Os01g08530:12001.t00731:unspliced-genomic fibroin heavy chain precursor, putative, expressed| Length = 1461 Score = 27.6 bits (54), Expect(2) = 3.2 Identities = 8/19 (42%), Positives = 9/19 (47%) Frame = +1 / +3 Query: 244 WRYWFSLWLVAVGS*DWGW 300 WR W+ W G WGW Sbjct: 1140 WRRWWYRWRTWSGRWHWGW 1196 Score = 23.1 bits (44), Expect(2) = 3.2 Identities = 6/11 (54%), Positives = 7/11 (63%) Frame = +2 / +3 Query: 338 LRRRWACLDAW 370 +R RW C D W Sbjct: 1329 VRSRWRCRDGW 1361
>LOC_Os01g42250:12001.t03744:unspliced-genomic expressed protein| Length = 3082 Score = 33.1 bits (66), Expect = 4.3 Identities = 11/35 (31%), Positives = 21/35 (60%) Frame = +3 / +3 Query: 927 KLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDEV 1031 KL AY + ++ + + F FDG ++ E TP+++ Sbjct: 2565 KLFRAYAKKVNLSVADLTFAFDGDKVDAESTPEDL 2669
>LOC_Os10g30610:12010.t02393:unspliced-genomic ABC-2 type transporter family protein, expressed| Length = 7933 Score = 33.1 bits (66), Expect = 4.3 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 / -1 Query: 1047 WHNSSIPRRGSAHHGAYDHQKGT 979 W SS+PRRG +H A HQ G+ Sbjct: 1120 WLGSSLPRRGRSHRDAPRHQDGS 1052
>LOC_Os10g13914:12010.t01114:unspliced-genomic expressed protein| Length = 6583 Score = 33.1 bits (66), Expect = 4.3 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -1 / +1 Query: 351 HRRRSRNRDPDSKSTALPTPILGSDRHQPQREPVS 247 HRR + P S +T+ T +LGS HQ R P S Sbjct: 5977 HRRTLYLQQPMSSATSPSTSLLGSTPHQASRTPAS 6081
>LOC_Os07g34520:12007.t03128:unspliced-genomic isocitrate lyase, putative, expressed| Length = 2641 Score = 33.1 bits (66), Expect = 4.3 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -1 / +2 Query: 360 KQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQ 262 ++AHRRR R+ DPD + A P D+ PQ Sbjct: 1070 RRAHRRRRRHADPDQRRRARPPVHPRRDQPAPQ 1168
>LOC_Os12g36390:12012.t03322:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3789 Score = 32.7 bits (65), Expect = 5.9 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -2 / -1 Query: 1286 LQKFIHFLHFTLV*KVPYDIEQPGCSNILLSATKAPS 1176 ++KF+H LH+ L+*K P +E+ +I K P+ Sbjct: 1092 IEKFLHRLHYLLL*KTPIPLEETCWKSIWPGRLKRPN 982
>LOC_Os09g29420:12009.t02620:unspliced-genomic queuine tRNA-ribosyltransferase, putative, expressed| Length = 5720 Score = 32.7 bits (65), Expect = 5.9 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -3 / +3 Query: 937 FISFLSCVDLLMRKKTSLPSCRTKEG 860 F+SF+S + +L+ KK S+P CR G Sbjct: 4842 FVSFVSFLTVLVNKKVSMPYCRFVRG 4919
>LOC_Os01g67770:12001.t06134:unspliced-genomic two-component response regulator ARR11, putative, expressed| Length = 3872 Score = 32.7 bits (65), Expect = 5.9 Identities = 14/28 (50%), Positives = 14/28 (50%) Frame = -3 / +2 Query: 169 WAPPPSPAGFLSSSAVTPDISGDSSVLC 86 W PPPSP G SSS T SS C Sbjct: 89 WTPPPSPTGCASSSWTTTPPGSRSSRRC 172 Score = 32.7 bits (65), Expect = 5.9 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +3 / -3 Query: 60 PDLSSSAARHSTEESPEMSGVTADEDKKPAGDGGGAH 170 P + H E+ V DED +P G+GGG H Sbjct: 198 PTFVGTLPEHLLEDLEPGGVVVHDEDAQPVGEGGGVH 88
>LOC_Os09g33840:12009.t02960:unspliced-genomic hypothetical protein| Length = 1853 Score = 32.7 bits (65), Expect = 5.9 Identities = 20/57 (35%), Positives = 25/57 (43%) Frame = -1 / -3 Query: 381 RLQSHASKQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREPVSP*RKGEGKTRRG 211 R A + RRR R + ALPT +L R P PV+P R G+ R G Sbjct: 1059 RSPPRAHARGPRRRRERRPSAPAADALPTTLLPRRRLPPPDLPVAPWRLEGGEGRDG 889
>LOC_Os05g28520:12005.t02500:unspliced-genomic ATP binding protein, putative, expressed| Length = 2890 Score = 32.7 bits (65), Expect = 5.9 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = -1 / -1 Query: 381 RLQSHASKQAHRRRSRNRDPDSKSTALPTPIL 286 R Q H + RRR R R P + LP P+L Sbjct: 886 RRQQHRESERVRRRRRRRRPSGLAAGLPAPLL 791
>LOC_Os05g16010:12005.t01372:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 1914 Score = 32.7 bits (65), Expect = 5.9 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 / +2 Query: 589 SQMWSSVRDQGCLGPRQNLCC 651 S W +R+QGC P+ N+CC Sbjct: 224 SSNWK*LRNQGCSLPKNNICC 286
>LOC_Os03g64080:12003.t05622:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 15359 Score = 32.7 bits (65), Expect = 5.9 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = -1 / +2 Query: 408 SARLGKWIYRLQSHASKQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREPVS 247 SAR +W+ R AS RR R PDS + P+ L S R + + P S Sbjct: 11489 SAR*RRWLTRCHPPASPSMTRR*CRTSSPDSTTIMSPSSPLLSARRRLYQSPKS 11650
>LOC_Os02g02520:12002.t00151:unspliced-genomic expressed protein| Length = 4303 Score = 32.7 bits (65), Expect = 5.9 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = -1 / +3 Query: 348 RRRSRNRDPDSKSTALPTPILGSDRHQPQREPVSP*RKGEGKTRRG 211 RRR R D+++ P P R + + PV P G G RG Sbjct: 33 RRRRRRGHGDTRAALRPPPARSRSRSRGAQSPVRPVAAGRGPAARG 170
>LOC_Os02g03200:12002.t00220:unspliced-genomic FAD binding domain containing protein, putative, expressed| Length = 2597 Score = 26.3 bits (51), Expect(3) = 6.6 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = -3 / -1 Query: 1012 SPRSLRPSKRNAMELRSTDWR 950 SPRS R +R RST WR Sbjct: 2267 SPRSRRRRRRRRAPCRSTRWR 2205 Score = 24.4 bits (47), Expect(3) = 6.6 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = -1 / -2 Query: 225 KTRRGTDWIRPAP 187 + RR T W RPAP Sbjct: 796 RARRATPWRRPAP 758 Score = 23.1 bits (44), Expect(3) = 6.6 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -3 / -1 Query: 166 APPPSPAGFLSSSAVTP 116 A PP A +SS++VTP Sbjct: 572 ARPPPAAASISSASVTP 522
>LOC_Os08g02680:12008.t00162:unspliced-genomic expressed protein| Length = 2717 Score = 24.9 bits (48), Expect(2) = 7.4 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = -3 / +2 Query: 187 LTLRLMWAPPPSPAGFLSSSAVTP 116 L LR ++ PPP P + +AV P Sbjct: 206 LPLRCLFPPPPPPPTPVPPAAVAP 277 Score = 24.4 bits (47), Expect(2) = 7.4 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -1 / +2 Query: 375 QSHASKQAHRRRSRNRDPDSKSTALPT 295 ++ A+ +R++ R P + STALPT Sbjct: 98 KASAAGGGRSKRTKARPPAAPSTALPT 178
>LOC_Os03g43250:12003.t03724:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5193 Score = 29.0 bits (57), Expect(2) = 7.4 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = -3 / -3 Query: 190 PLTLRLMWAPPPSPAGFLSSS 128 PL+L +W P P+PAG + + Sbjct: 1333 PLSLGFVWKPSPNPAGAIDGA 1271 Score = 26.3 bits (51), Expect(2) = 7.4 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -1 / -3 Query: 336 RNRDPDSKSTALPTPILGSDRHQPQREP 253 R+R P + TPILG+ RH P Sbjct: 3343 RHRLPHDLPALIRTPILGAKRHSTPGSP 3260
>LOC_Os06g33710:12006.t03068:unspliced-genomic spermidine synthase 1, putative, expressed| Length = 5418 Score = 29.0 bits (57), Expect(2) = 7.7 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = +1 / +3 Query: 313 FRIRISVSAPSPMGLFRCM 369 + + ISV +P PMG+F C+ Sbjct: 2175 YNLSISVCSPQPMGMFWCL 2231 Score = 26.3 bits (51), Expect(2) = 7.7 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +2 / +1 Query: 1028 GMLLLCQHYRTLTFSNSIVCTIVDVLYCLQIVL 1126 G+LL CQH ++++I+ V YCL + L Sbjct: 4834 GLLLFCQHL*GENWNHTILVLKR*VTYCLLLFL 4932
>LOC_Os04g52710:12004.t04745:unspliced-genomic imidazoleglycerol-phosphate dehydratase, putative, expressed| Length = 4331 Score = 32.2 bits (64), Expect = 8.1 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -3 / +2 Query: 178 RLMWAPPPSPAGFLSSSAVTPDISGDSSV 92 RL+W PPP P L TP + SS+ Sbjct: 227 RLLWPPPPPPGTALLPRRRTPQVDSASSI 313
>LOC_Os11g39810:12011.t03523:unspliced-genomic hypothetical protein| Length = 3459 Score = 32.2 bits (64), Expect = 8.1 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -1 / -3 Query: 360 KQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREPVSP*RKGEGKTRRGT 208 ++ HRR SR R + + G R +P+R P R G RRGT Sbjct: 814 RREHRR*SRGRRSPHRRGGSSRHLRGPARRRPRRRPPRWARARRGSPRRGT 662
>LOC_Os04g32270:12004.t02906:unspliced-genomic ATGP4, putative, expressed| Length = 4099 Score = 32.2 bits (64), Expect = 8.1 Identities = 18/66 (27%), Positives = 25/66 (37%) Frame = -1 / +1 Query: 417 GYESARLGKWIYRLQSHASKQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREPVSP*R 238 G+E + KW R ++ ++ RRR R S S + P G P P P R Sbjct: 205 GWEGGKAKKWRRRRRARWRRRVGRRRRPTRRWRSSSASSTAPTSGPSAATPSPPPSPPSR 384 Query: 237 KGEGKT 220 T Sbjct: 385 TASSPT 402
>LOC_Os04g05070:12004.t00390:unspliced-genomic expressed protein| Length = 1193 Score = 32.2 bits (64), Expect = 8.1 Identities = 19/67 (28%), Positives = 25/67 (37%) Frame = -1 / +3 Query: 408 SARLGKWIYRLQSHASKQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREPVSP*RKGE 229 S R G+ S A R R R P S+ + P P + P+R P P R+ Sbjct: 492 SCRRGRCSRHSSSPARSPGGATRRRPRRPTSRRSTRPRPPTPTTTPSPRRRPRRPRRRAT 671 Query: 228 GKTRRGT 208 GT Sbjct: 672 AAAAAGT 692
>LOC_Os03g48220:12003.t04180:unspliced-genomic expressed protein| Length = 1199 Score = 32.2 bits (64), Expect = 8.1 Identities = 18/63 (28%), Positives = 24/63 (38%) Frame = -1 / +1 Query: 381 RLQSHASKQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREPVSP*RKGEGKTRRGTDW 202 RL A R R R P ++ +P + R P R + G G RRG Sbjct: 397 RLHQREPPLARLPRRRGRHPQRQAPPVPQHLPRPHRRPPPRPRPAARESGRGAGRRGARL 576 Query: 201 IRP 193 +RP Sbjct: 577 LRP 585
>LOC_Os01g32120:12001.t02791:unspliced-genomic calmodulin, putative, expressed| Length = 1021 Score = 32.2 bits (64), Expect = 8.1 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -1 / -2 Query: 375 QSHASKQAHRRRSRNRDPDSKSTALPTPILGSDRHQPQREP 253 +S +S R R R RDP S LP+P+ +R + P Sbjct: 444 ESSSSVLGLRPRERRRDPSSSCVRLPSPLRSKERKISRSSP 322
>LOC_Os02g56900:12002.t05262:unspliced-genomic thioredoxin, putative, expressed| Length = 1525 Score = 31.8 bits (63), Expect(2) = 8.3 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = +2 / +1 Query: 251 TGSRCGWWRSDPRIGVGR 304 TG RCGWWR R GR Sbjct: 553 TGGRCGWWRWARRTSRGR 606 Score = 21.7 bits (41), Expect(2) = 8.3 Identities = 6/10 (60%), Positives = 7/10 (70%) Frame = +2 / +1 Query: 341 RRRWACLDAW 370 RRRW C +W Sbjct: 1060 RRRWRCGGSW 1089
>LOC_Os01g16390:12001.t01488:unspliced-genomic NBS-LRR disease resistance protein, putative| Length = 3738 Score = 25.4 bits (49), Expect(2) = 9.7 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = -3 / -2 Query: 163 PPPSPAGFLSSSA 125 PPPSPA SSSA Sbjct: 395 PPPSPASSTSSSA 357 Score = 23.5 bits (45), Expect(2) = 9.7 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -1 / -2 Query: 240 RKGEGKTRRGTDWIRPAP 187 R+G G+ RRGT R +P Sbjct: 461 RRGTGRRRRGTGSCRCSP 408 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 493,300,326 Number of extensions: 7857960 Number of successful extensions: 38669 Number of sequences better than 10.0: 45 Length of query: 435 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 385 Effective length of database: 52,799,986 Effective search space: 20327994610 Effective search space used: 20327994610 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
