ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf169n17 |
|---|---|
| Clone Library Name | barley_pub |
>P17840:SLSG3_BRAOL S-locus-specific glycoprotein S13 precursor - Brassica oleracea (Wild| cabbage) Length = 434 Score = 238 bits (606), Expect = 9e-62 Identities = 142/416 (34%), Positives = 205/416 (49%), Gaps = 7/416 (1%) Frame = -3 Query: 1377 LRDNDTLVSAQGKFELGLFTPAGSSDGRFYLGIWYKNIPGQTVVWVGNRASPLSGVASAE 1198 + N TLVS FELG F SS R+YLGIWYK P +T VWV NR +PLS Sbjct: 42 ISSNRTLVSPGNVFELGFFKTTSSS--RWYLGIWYKKFPYRTYVWVANRDNPLSN----- 94 Query: 1197 LRVSAEDGNLELVGPTAASAXXXXXXXXXXXXXXXXXXXXXTAEVRDNGNLVLLDGG--N 1024 + G L++ G AE+ DNGN V+ D N Sbjct: 95 -----DIGTLKISGNNLVLLDHSNKSVWSTNVTRGNERSPVVAELLDNGNFVMRDSNSNN 149 Query: 1023 TSKVLWQSFDHPTDTLIPGAWLGENKLTGEYQVLTSWRSAQDPAPGMFTDTVDPNGTSEF 844 S+ LWQSFD+PTDTL+P LG + TG + LTSWRS+ DP+ G ++ ++ EF Sbjct: 150 ASQFLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDYSYKLELRRLPEF 209 Query: 843 FYMWNQSRTYWRSGVWTGRFFATMPEATRNILFNQTYVETPTYRRVSNALYNNATITRLV 664 + R + RSG W G + +PE + + E + + NN+ +RL Sbjct: 210 YLSSGSFRLH-RSGPWNGFRISGIPEDQKLSYMVYNFTENSEEAAYTFLMTNNSFYSRLT 268 Query: 663 LELTGQTKQYIWVPASQNWQLFWAAPTVQCDVYALCGAFGVCDLSSQPSCRCPPGFAPAS 484 + TG ++ W P+S W +FW++P QCD+Y +CG + CD+++ P C C GF P + Sbjct: 269 ISSTGYFERLTWAPSSVVWNVFWSSPNHQCDMYRMCGPYSYCDVNTSPVCNCIQGFRPKN 328 Query: 483 EGDWTLSDWSGGCRRSVPLWCPHNGSTTDRFLTLPNVKLPNDSDSLAVGAAQSKAECESA 304 W L + GC R L C +G F + N+KLP + ++ V + ECE Sbjct: 329 RQQWDLRIPTSGCIRRTRLSCSGDG-----FTRMKNMKLPETTMAI-VHRSIGLKECEKR 382 Query: 303 CQNSCSCEAYTFSAGR-----CAVWHGELRNLQQLYADSGVSRSSDLYLRLSAIGL 151 C + C+C A+ + R C +W GEL +++ +AD DLY+RL+A L Sbjct: 383 CLSDCNCTAFANADIRNRGTGCVIWTGELEDIRTYFAD-----GQDLYVRLAAADL 433
>P07761:SLSG6_BRAOL S-locus-specific glycoprotein S6 precursor - Brassica oleracea (Wild| cabbage) Length = 436 Score = 231 bits (589), Expect = 9e-60 Identities = 149/426 (34%), Positives = 210/426 (49%), Gaps = 10/426 (2%) Frame = -3 Query: 1398 TVSARRPLR--DNDTLVSAQGKFELGLFTPAGSSDGRFYLGIWYKNIPGQTVVWVGNRAS 1225 T+S+ LR N TLVS FELG F SS R+YLGIWYK + +T VWV NR + Sbjct: 34 TLSSTESLRISSNRTLVSPGNNFELGFFRTNSSS--RWYLGIWYKKLLDRTYVWVANRDN 91 Query: 1224 PLSGVASAELRVSAEDGNLELVGPTAASAXXXXXXXXXXXXXXXXXXXXXTAEVRDNGNL 1045 PLS A L++S NL L+G T S AE+ NGN Sbjct: 92 PLSN-AIGTLKISGN--NLVLLGHTNKSVWSTNLTRGNERLPVV-------AELLSNGNF 141 Query: 1044 VLLDGGNT--SKVLWQSFDHPTDTLIPGAWLGENKLTGEYQVLTSWRSAQDPAPGMFTDT 871 V+ D N S+ LWQSFD+PTDTL+P LG + TG + LTSWRS+ DP+ G F+ Sbjct: 142 VMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDFSYK 201 Query: 870 VDPNGTSEFFYMWNQSRTYWRSGVWTGRFFATMPEATRNILFNQTYVETPTYRRVSNALY 691 ++ EF Y+W+ RSG W G F+ +PE + + E + + Sbjct: 202 LETRSLPEF-YLWHGIFPMHRSGPWNGVRFSGIPEDQKLSYMVYNFTENSEEVAYTFRMT 260 Query: 690 NNATITRLVLELTGQTKQYIWVPASQNWQLFWAAPT-VQCDVYALCGAFGVCDLSSQPSC 514 NN+ +RL L G ++ W P+ W FW++P QCD Y +CG + C +++ P C Sbjct: 261 NNSIYSRLTLSSEGYFQRLTWNPSIGIWNRFWSSPVDPQCDTYIMCGPYAYCGVNTSPVC 320 Query: 513 RCPPGFAPASEGDWTLSDWSGGCRRSVPLWCPHNGSTTDRFLTLPNVKLPNDSDSLAVGA 334 C GF P + W W+GGC R L C +G F + N+KLP + ++ V Sbjct: 321 NCIQGFNPRNIQQWDQRVWAGGCIRRTRLSCSGDG-----FTRMKNMKLPETTMAI-VDR 374 Query: 333 AQSKAECESACQNSCSCEAYTFSAGR-----CAVWHGELRNLQQLYADSGVSRSSDLYLR 169 + ECE C + C+C A+ + R C +W G L +++ V+ DLY+R Sbjct: 375 SIGVKECEKRCLSDCNCTAFANADIRNGGTGCVIWTGRLDDMRNY-----VAHGQDLYVR 429 Query: 168 LSAIGL 151 L+ L Sbjct: 430 LAVADL 435
>P22553:SLSG2_BRAOA S-locus-specific glycoprotein BS29-2 precursor - Brassica oleracea| var. alboglabra (Chinese kale) Length = 435 Score = 226 bits (577), Expect = 2e-58 Identities = 141/417 (33%), Positives = 211/417 (50%), Gaps = 8/417 (1%) Frame = -3 Query: 1377 LRDNDTLVSAQGKFELGLFTPAGSSDGRFYLGIWYKNIPGQTVVWVGNRASPLSGVASAE 1198 + ++ TLVS ELG F SS R+YLG+WYK + +T VWV NR +PLS + Sbjct: 42 ISNSRTLVSPGNVLELGFFRTPSSS--RWYLGMWYKKLSERTYVWVANRDNPLS-CSIGT 98 Query: 1197 LRVSAEDGNLELVGPTAASAXXXXXXXXXXXXXXXXXXXXXTAEVRDNGNLVLLDGGNTS 1018 L++S + NL L+ + S AE+ NGN VL D Sbjct: 99 LKIS--NMNLVLLDHSNKSLWSTNHTRGNERSPVV-------AELLANGNFVLRDSNKND 149 Query: 1017 K--VLWQSFDHPTDTLIPGAWLGENKLTGEYQVLTSWRSAQDPAPGMFTDTVDPNGTSEF 844 + LWQSFD+PTDTL+P LG + TG + LTSWRS+ DP+ G F+ + EF Sbjct: 150 RSGFLWQSFDYPTDTLLPEMKLGYDLRTGLNRFLTSWRSSDDPSSGDFSYKLQTRRLPEF 209 Query: 843 FYMWNQSRTYWRSGVWTGRFFATMPEATRNILFNQTYVETPTYRRVSNALYNNATITRLV 664 Y++ RSG W G F+ MPE + + + + + NN+ +RL Sbjct: 210 -YLFKDDFLVHRSGPWNGVGFSGMPEDQKLSYMVYNFTQNSEEVAYTFLMTNNSIYSRLT 268 Query: 663 LELTGQTKQYIWVPASQNWQLFWAAPT-VQCDVYALCGAFGVCDLSSQPSCRCPPGFAPA 487 + +G ++ W P+S W +FW++P QCDVY +CGA+ CD+++ P C C F P+ Sbjct: 269 ISSSGYFERLTWTPSSGMWNVFWSSPEDFQCDVYKICGAYSYCDVNTSPVCNCIQRFDPS 328 Query: 486 SEGDWTLSDWSGGCRRSVPLWCPHNGSTTDRFLTLPNVKLPNDSDSLAVGAAQSKAECES 307 + +W L WSGGCRR L C +G F + +KLP + ++ V + ECE Sbjct: 329 NVQEWGLRAWSGGCRRRTRLSCSGDG-----FTRMKKMKLPETTMAI-VDRSIGLKECEK 382 Query: 306 ACQNSCSCEAYTFSAGR-----CAVWHGELRNLQQLYADSGVSRSSDLYLRLSAIGL 151 C + C+C A+ + R C +W G+L +++ +A+ DLY+RL+ L Sbjct: 383 RCLSDCNCTAFANADIRNGGTGCVIWTGQLEDIRTYFAN-----GQDLYVRLAPADL 434
>Q09092:SRK6_BRAOE Putative serine/threonine-protein kinase receptor precursor -| Brassica oleracea var. acephala (Flowering kale) Length = 849 Score = 222 bits (566), Expect = 4e-57 Identities = 136/426 (31%), Positives = 202/426 (47%), Gaps = 8/426 (1%) Frame = -3 Query: 1377 LRDNDTLVSAQGKFELGLFTPAGSSDGRFYLGIWYKNIPGQTVVWVGNRASPLSGVASAE 1198 + N TLVS FE+G F ++ R+YLG+WYK + +T VWV NR +PLS Sbjct: 44 ISSNKTLVSPGSIFEVGFFR----TNSRWYLGMWYKKVSDRTYVWVANRDNPLSNAI--- 96 Query: 1197 LRVSAEDGNLELVGPTAASAXXXXXXXXXXXXXXXXXXXXXTAEVRDNGNLVLLDGGNT- 1021 G L++ G AE+ NGN V+ D N Sbjct: 97 -------GTLKISGNNLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNND 149 Query: 1020 -SKVLWQSFDHPTDTLIPGAWLGENKLTGEYQVLTSWRSAQDPAPGMFTDTVDPNGTSEF 844 S+ LWQSFD+PTDTL+P LG N TG + LTSWRS+ DP+ G F+ ++ EF Sbjct: 150 ASEYLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLETQSLPEF 209 Query: 843 FYMWNQSRTYWRSGVWTGRFFATMPEATRNILFNQTYVETPTYRRVSNALYNNATITRLV 664 Y+ ++ RSG W G F+ +PE + ++E + + NN+ +RL Sbjct: 210 -YLSRENFPMHRSGPWNGIRFSGIPEDQKLSYMVYNFIENNEEVAYTFRMTNNSFYSRLT 268 Query: 663 LELTGQTKQYIWVPASQNWQLFWAAPT-VQCDVYALCGAFGVCDLSSQPSCRCPPGFAPA 487 L G ++ W P+ + W FW++P QCD Y +CG + CD+++ P C C GF P Sbjct: 269 LISEGYFQRLTWYPSIRIWNRFWSSPVDPQCDTYIMCGPYAYCDVNTSPVCNCIQGFNPR 328 Query: 486 SEGDWTLSDWSGGCRRSVPLWCPHNGSTTDRFLTLPNVKLPNDSDSLAVGAAQSKAECES 307 + W W+GGC R L C +G T + + LP + S+ V EC+ Sbjct: 329 NIQQWDQRVWAGGCIRRTQLSCSGDGFTRMKKMKLPETTMATVDRSIGV------KECKK 382 Query: 306 ACQNSCSCEAYTFSAGR-----CAVWHGELRNLQQLYADSGVSRSSDLYLRLSAIGLRDL 142 C + C+C A+ + R C +W L +++ YA + DLY+RL+A + Sbjct: 383 RCISDCNCTAFANADIRNGGSGCVIWTERLEDIRN-YATDAID-GQDLYVRLAAADIAKK 440 Query: 141 HSAGRK 124 +A K Sbjct: 441 RNASGK 446
>P17841:SLSG4_BRAOL S-locus-specific glycoprotein S14 precursor - Brassica oleracea (Wild| cabbage) Length = 434 Score = 210 bits (534), Expect = 2e-53 Identities = 141/414 (34%), Positives = 199/414 (48%), Gaps = 8/414 (1%) Frame = -3 Query: 1377 LRDNDTLVSAQGKFELGLFTPAGSSDGRFYLGIWYKNIPGQTVVWVGNRASPLSGVASAE 1198 + N TLVS FELG F SS R+YLGIWYK + +T VWV NR +PLS Sbjct: 40 ISSNRTLVSPGNVFELGFFRTNSSS--RWYLGIWYKKVSDRTYVWVANRDNPLS------ 91 Query: 1197 LRVSAEDGNLELVGPTAASAXXXXXXXXXXXXXXXXXXXXXTAEVRDNGNLVLLDGGNT- 1021 + G L++ G A+V NGN V+ D N Sbjct: 92 ----SSIGTLKISGNNPCHLDHSNKSVWSTNLTRGNERSPVVADVLANGNFVMRDSNNND 147 Query: 1020 -SKVLWQSFDHPTDTLIPGAWLGENKLTGEYQVLTSWRSAQDPAPGMFTDTVDPNGTSEF 844 S LWQSFD PTDTL+P L + TG + LTS RS+ DP+ G F+ ++P E Sbjct: 148 ASGFLWQSFDFPTDTLLPEMKLSYDLKTGLNRFLTSRRSSDDPSSGDFSYKLEPRRLPE- 206 Query: 843 FYMWNQSRTYWRSGVWTGRFFATMPEATRNILFNQTYVETPTYRRVSNALYNNATITRLV 664 FY+ + +RSG W G F+ +P+ + L Y+ + NN+ +RL Sbjct: 207 FYLSSGVFLLYRSGPWNGIRFSGLPDDQK--LSYLVYISQDMRVAYKFRMTNNSFYSRLF 264 Query: 663 LELTGQTKQYIWVPASQNWQLFWAAP-TVQCDVYALCGAFGVCDLSSQPSCRCPPGFAPA 487 + +G +Q W P+SQ W FWA P QC Y CG + C +++ C C GF P+ Sbjct: 265 VSFSGYIEQQTWNPSSQMWNSFWAFPLDSQCYTYRACGPYSYCVVNTSAICNCIQGFNPS 324 Query: 486 SEGDWTLSDWSGGCRRSVPLWCPHNGSTTDRFLTLPNVKLPNDSDSLAVGAAQSKAECES 307 + W W+GGC R L + D F + N+KLP + ++ V + ECE Sbjct: 325 NVQQWDQRVWAGGCIRRTRL-----SGSGDGFTRMKNMKLPETTMAI-VDRSIGVKECEK 378 Query: 306 ACQNSCSCEAYTFSAGR-----CAVWHGELRNLQQLYADSGVSRSSDLYLRLSA 160 C N C+C A+ + R C + GEL +++ YA +G + S DLY+RL+A Sbjct: 379 RCLNDCNCTAFANADIRNGGTGCVINTGELEDMRS-YA-TGATDSQDLYVRLAA 430
>P22552:SLSG1_BRAOA S-locus-specific glycoprotein BS29-1 precursor - Brassica oleracea| var. alboglabra (Chinese kale) Length = 444 Score = 209 bits (531), Expect = 5e-53 Identities = 143/439 (32%), Positives = 206/439 (46%), Gaps = 16/439 (3%) Frame = -3 Query: 1419 PAVGAPATVSARRPLR--DNDTLVSAQGKFELGLF--TPAGSSDG--RFYLGIWYKNIPG 1258 P V + T+S L N TLVS FELG F T S DG R+YLGIWYK G Sbjct: 24 PHVFSTNTLSPNEALTISSNKTLVSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKTTSG 83 Query: 1257 -QTVVWVGNRASPLSGVASAELRVSAEDGNLELVGPTAASAXXXXXXXXXXXXXXXXXXX 1081 +T VWV NR + L + L++S +L L+ + Sbjct: 84 HRTYVWVANRDNALHN-SMGTLKIS--HASLVLLDHSNTPVWSTNFTGVAHLPVT----- 135 Query: 1080 XXTAEVRDNGNLVLLDGGNTS--KVLWQSFDHPTDTLIPGAWLGENKL-TGEYQVLTSWR 910 AE+ NGN VL D T+ + +WQSFD+P DTL+P LG N+ +G ++LTSW+ Sbjct: 136 ---AELLANGNFVLRDSKTTALDRFMWQSFDYPVDTLLPEMKLGRNRNGSGNEKILTSWK 192 Query: 909 SAQDPAPGMFTDTVDPNGTSEFFYMWNQSRTYWRSGVWTGRFFATMPEATRNILFNQTYV 730 S DP+ G ++ ++ G FY+ N +R+G W G F +P+ + +++ Sbjct: 193 SPTDPSSGDYSFILETEGFLHEFYLLNNEFKVYRTGPWNGVRFNGIPKMQNWSYIDNSFI 252 Query: 729 ETPTYRRVSNALYNNATI-TRLVLELTGQTKQYIWVPASQNWQLFWAAPTVQCDVYALCG 553 + S + NN I TR + TG + W +FW+ P CD+Y +CG Sbjct: 253 DNNKEVAYSFQVNNNHNIHTRFRMSSTGYLQVITWTKTVPQRNMFWSFPEDTCDLYKVCG 312 Query: 552 AFGVCDLSSQPSCRCPPGFAPASEGDWTLSDWSGGCRRSVPLWCPHNGSTTDRFLTLPNV 373 + CD+ + P+C C GF P + G W L D SGGC RS L C D FL + + Sbjct: 313 PYAYCDMHTSPTCNCIKGFVPKNAGRWDLRDMSGGCVRSSKLSCGEG----DGFLRMSQM 368 Query: 372 KLPNDSDSLAVGAAQSKAECESACQNSCSCEAYT-----FSAGRCAVWHGELRNLQQLYA 208 KLP S+++ V EC C C+C Y C +W GEL ++++ A Sbjct: 369 KLPETSEAV-VDKRIGLKECREKCVRDCNCTGYANMDIMNGGSGCVMWTGELDDMRKYNA 427 Query: 207 DSGVSRSSDLYLRLSAIGL 151 DLYL+++A L Sbjct: 428 G-----GQDLYLKVAAASL 441
>P22551:SLSG0_BRAOA S-locus-specific glycoprotein precursor - Brassica oleracea var.| alboglabra (Chinese kale) Length = 444 Score = 204 bits (519), Expect = 1e-51 Identities = 141/439 (32%), Positives = 203/439 (46%), Gaps = 16/439 (3%) Frame = -3 Query: 1419 PAVGAPATVSARRPLR--DNDTLVSAQGKFELGLF--TPAGSSDG--RFYLGIWYKNIPG 1258 P V + T+S L N TLVS FELG F T S DG R+YLGIWYK G Sbjct: 24 PHVFSTNTLSPNEALTISSNKTLVSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKTTSG 83 Query: 1257 -QTVVWVGNRASPLSGVASAELRVSAEDGNLELVGPTAASAXXXXXXXXXXXXXXXXXXX 1081 +T VWV NR + L + L++S +L L+ + Sbjct: 84 HRTYVWVANRDNALHN-SMGTLKIS--HASLVLLDHSNTPVWSTNFTGVAHLPVT----- 135 Query: 1080 XXTAEVRDNGNLVLLDG--GNTSKVLWQSFDHPTDTLIPGAWLGENKLTGEYQ-VLTSWR 910 AE+ NGN VL D + + +WQSFD+P DTL+P LG N + E + +LTSW+ Sbjct: 136 ---AELLANGNFVLRDSKTNDLDRFMWQSFDYPVDTLLPEMKLGRNLIGSENEKILTSWK 192 Query: 909 SAQDPAPGMFTDTVDPNGTSEFFYMWNQSRTYWRSGVWTGRFFATMPEATRNILFNQTYV 730 S DP+ G F+ ++ G FY+ +R+G W G F +P+ + +++ Sbjct: 193 SPTDPSSGDFSFILETEGFLHEFYLLKNEFKVYRTGPWNGVRFNGIPKMQNWSYIDNSFI 252 Query: 729 ETPTYRRVSNALYNNATI-TRLVLELTGQTKQYIWVPASQNWQLFWAAPTVQCDVYALCG 553 + S + NN I TR + TG + W +FW+ P CD+Y +CG Sbjct: 253 DNNEEVAYSFQVNNNHNIHTRFRMSSTGYLQVITWTKTVPQRNMFWSFPEDTCDLYKVCG 312 Query: 552 AFGVCDLSSQPSCRCPPGFAPASEGDWTLSDWSGGCRRSVPLWCPHNGSTTDRFLTLPNV 373 + CD+ + P+C C GF P + G W L D SGGC RS L C D FL + + Sbjct: 313 PYAYCDMHTSPTCNCIKGFVPKNAGRWDLRDMSGGCVRSSKLSCGEG----DGFLRMSQM 368 Query: 372 KLPNDSDSLAVGAAQSKAECESACQNSCSCEAYT-----FSAGRCAVWHGELRNLQQLYA 208 KLP S+++ V EC C C+C Y C +W GEL ++++ A Sbjct: 369 KLPETSEAV-VDKRIGLKECREKCVRDCNCTGYANMDIMNGGSGCVMWTGELDDMRKYNA 427 Query: 207 DSGVSRSSDLYLRLSAIGL 151 DLY++++A L Sbjct: 428 G-----GQDLYVKVAAASL 441
>P17801:KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor - Zea mays (Maize)| Length = 817 Score = 106 bits (265), Expect = 3e-22 Identities = 101/396 (25%), Positives = 155/396 (39%), Gaps = 25/396 (6%) Frame = -3 Query: 1371 DNDTLVSAQGKFELGLFTPAGSSDGRFYLGIWYKNIPG-----QTVVWVGNRASPLSGVA 1207 ++ TL S+ G F G + + F +WY +T+VW N P+ Sbjct: 44 ESSTLQSSDGTFSSGFYEVYTHA---FTFSVWYSKTEAAAANNKTIVWSANPDRPVHARR 100 Query: 1206 SAELRVSAEDGNLELVGPTAASAXXXXXXXXXXXXXXXXXXXXXTAEVRDNGNLVLLD-G 1030 SA +DGN+ L A+ A + D GNLV+ D G Sbjct: 101 SA--LTLQKDGNMVLTDYDGAAVWRADGNNFTGVQR---------ARLLDTGNLVIEDSG 149 Query: 1029 GNTSKVLWQSFDHPTDTLIPGAWLGENKLTGEYQVLTSWRSAQDPAPGMFTDTVDPNGTS 850 GNT +WQSFD PTDT +P +L L ++ P +F + D + S Sbjct: 150 GNT---VWQSFDSPTDTFLP------TQLITAATRLVPTTQSRSPGNYIFRFS-DLSVLS 199 Query: 849 EFFYMWNQSRTYWRSGVWTGRFFATMPEATRNIL------FNQTYVETPTYRRV---SNA 697 +++ S YW P+ +N+ +N T + T V S+ Sbjct: 200 LIYHVPQVSDIYW-------------PDPDQNLYQDGRNQYNSTRLGMLTDSGVLASSDF 246 Query: 696 LYNNATIT---------RLVLELTGQTKQYIWVPASQNWQLFWAAPTVQCDVYALCGAFG 544 A + RL L+ G + Y + +W + A T C+++ LCG G Sbjct: 247 ADGQALVASDVGPGVKRRLTLDPDGNLRLYSMNDSDGSWSVSMVAMTQPCNIHGLCGPNG 306 Query: 543 VCDLSSQPSCRCPPGFAPASEGDWTLSDWSGGCRRSVPLWCPHNGSTTDRFLTLPNVKL- 367 +C S P+C CPPG+A + G+WT GC V C + RF+ LPN Sbjct: 307 ICHYSPTPTCSCPPGYATRNPGNWT-----EGCMAIVNTTCDRYDKRSMRFVRLPNTDFW 361 Query: 366 PNDSDSLAVGAAQSKAECESACQNSCSCEAYTFSAG 259 +D L + S C C + C+C+ + + G Sbjct: 362 GSDQQHL---LSVSLRTCRDICISDCTCKGFQYQEG 394
>Q39688:EP1G_DAUCA Epidermis-specific secreted glycoprotein EP1 precursor - Daucus| carota (Carrot) Length = 389 Score = 52.8 bits (125), Expect = 6e-06 Identities = 71/306 (23%), Positives = 113/306 (36%), Gaps = 38/306 (12%) Frame = -3 Query: 1248 VWVGNRASPLSGVASAELRVSAEDGNLELVGPTAASAXXXXXXXXXXXXXXXXXXXXXTA 1069 VW NR +P+ A+ DGNL L A Sbjct: 91 VWEANRGNPVDENATLTF---GPDGNLVLARSNGQVAWQTSTANKGVVGL---------- 137 Query: 1068 EVRDNGNLVLLDGGNTSKVLWQSFDHPTDTLIPGAWLGENKLTGEYQVLTSWRSAQDPAP 889 ++ NGN+VL D + K LWQSFD PTDTL+ +G++ G L S S + Sbjct: 138 KILPNGNMVLYD--SKGKFLWQSFDTPTDTLL----VGQSLKMGAVTKLVSRASPGENVN 191 Query: 888 GMFTDTVDPNGTSEFFYMWNQSR--TYWRSGVWTGRFFATMPEATRNILF------NQTY 733 G ++ ++P G ++ + Y+ ++T E+ +N+ F +Q + Sbjct: 192 GPYSLVMEPKGLHLYYKPTTSPKPIRYYSFSLFTK---LNKNESLQNVTFEFENENDQGF 248 Query: 732 VETPTYR----------RVSNALYNNATITRLVLELTGQTKQYIWVPA------SQNWQL 601 + + + N + N T++ L LE+ G K Y + + L Sbjct: 249 AFLLSLKYGTSNSLGGASILNRIKYNTTLSFLRLEIDGNVKIYTYNDKVDYGAWEVTYTL 308 Query: 600 FWAAP--------------TVQCDVYALCGAFGVCDLSSQPSCRCPPGFAPASEGDWTLS 463 F AP + +C + CG FG+C+ S C P S G + Sbjct: 309 FLKAPPPLFQVSLAATESESSECQLPKKCGNFGLCEESQCVGC-------PTSSG--PVL 359 Query: 462 DWSGGC 445 WS C Sbjct: 360 AWSKTC 365
>P98157:LRP1_CHICK Low-density lipoprotein receptor-related protein 1 precursor - Gallus| gallus (Chicken) Length = 4543 Score = 38.5 bits (88), Expect = 0.11 Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 1/110 (0%) Frame = -3 Query: 579 QCDVYALCGAFGVCDLSSQPSCRCPPGFAPASEGDWTLSDWSGGCRRSV-PLWCPHNGST 403 QC Y G S P+CRCP GF C + V +C +NGS Sbjct: 4234 QCSDYCQNGGLCTASPSGMPTCRCPTGFT------------GSRCDQQVCTNYCHNNGSC 4281 Query: 402 TDRFLTLPNVKLPNDSDSLAVGAAQSKAECESACQNSCSCEAYTFSAGRC 253 T PN + P +G +C + C+N+ C+ +C Sbjct: 4282 TVNQGNQPNCRCP----PTFIGDRCQYQQCFNYCENNGVCQMSRDGVKQC 4327
>Q68DN1:CB016_HUMAN Uncharacterized protein C2orf16 - Homo sapiens (Human)| Length = 1984 Score = 36.2 bits (82), Expect = 0.54 Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Frame = -2 Query: 811 AERRLDGAILRDHAGGDEEHPLQPDVRGDADIPARQ*RALQQRDHHAPGARAHR-PDEAV 635 +ERR R H G E P R R R+ +R HH+P R+H P E Sbjct: 1690 SERRHRSPSQRSHRGPSERRHHSPSKRSHRSPARRSHRSPSERSHHSPSERSHHSPSERR 1749 Query: 634 HLGASE 617 H SE Sbjct: 1750 HHSPSE 1755 Score = 34.7 bits (78), Expect = 1.6 Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Frame = -2 Query: 811 AERRLDGAILRDHAGGDEEHPLQPDVRGDADIPARQ*RALQQRDHHAPGARAHR-PDEAV 635 +ERR R H G E P R R R +R HH+P R+HR P Sbjct: 1666 SERRHRSPSQRSHRGPSERSHCSPSERRHRSPSQRSHRGPSERRHHSPSKRSHRSPARRS 1725 Query: 634 HLGASE 617 H SE Sbjct: 1726 HRSPSE 1731
>P22105:TENX_HUMAN Tenascin-X precursor - Homo sapiens (Human)| Length = 4289 Score = 34.3 bits (77), Expect = 2.1 Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 5/119 (4%) Frame = -3 Query: 591 APTVQCDVYALCGAFGVCDLSSQPSCRCPPGFAPASEGDWTLSDWSGGCRRSVPLWCPHN 412 A T Q DV LC GV DL S+ +C C PG+ + D T ++ S CP + Sbjct: 132 AGTGQTDVRTLCSLHGVFDL-SRCTCSCEPGWGGPTCSDPTDAEIPPSSPPSASGSCPDD 190 Query: 411 GS-----TTDRFLTLPNVKLPNDSDSLAVGAAQSKAECESACQNSCSCEAYTFSAGRCA 250 + R + P P+ G Q + C Q C C A FS C+ Sbjct: 191 CNDQGRCVRGRCVCFPGYTGPSCGWPSCPGDCQGRGRC---VQGVCVCRA-GFSGPDCS 245
>Q67JT3:RPOB_SYMTH DNA-directed RNA polymerase beta chain - Symbiobacterium| thermophilum Length = 1250 Score = 34.3 bits (77), Expect = 2.1 Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Frame = -2 Query: 982 HADSRRVARGEQAHRRVPGADVVAECPRPCTGDVHRHGGSQRDKRVLLHV-EPVTHVLAE 806 H R+ + RR+ G V P TG+V G Q DKR+ + E L Sbjct: 267 HVGRYRLNKKLALKRRIVGTSTVDRVVHPETGEVLAEAGVQIDKRLAEKIDEAGVDALTV 326 Query: 805 RRLDGAILRDHAGGDEEHPLQPDVR 731 R DG I+R A G +PD+R Sbjct: 327 RLRDGGIVRVVANG------RPDIR 345
>O75095:MEGF6_HUMAN Multiple epidermal growth factor-like domains 6 precursor - Homo| sapiens (Human) Length = 1229 Score = 34.3 bits (77), Expect = 2.1 Identities = 31/119 (26%), Positives = 36/119 (30%), Gaps = 4/119 (3%) Frame = -3 Query: 582 VQCDVYALCGAFGVCDLSSQPSCRCPPG-FAPASEGDWTLSDWSGGCRRSVPLWCPHNG- 409 V C CG ++ Q CRCPPG E D W GC+ P C H Sbjct: 633 VNCSSSCSCGGAPCHGVTGQ--CRCPPGRTGEDCEADCPEGRWGLGCQEICPA-CQHAAR 689 Query: 408 --STTDRFLTLPNVKLPNDSDSLAVGAAQSKAECESACQNSCSCEAYTFSAGRCAVWHG 238 T L LP D G + +C N C T W G Sbjct: 690 CDPETGACLCLPGFVGSRCQDVCPAGWYGPSCQTRCSCANDGHCHPATGHCSCAPGWTG 748
>Q8IYB3:SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 - Homo sapiens (Human)| Length = 904 Score = 33.9 bits (76), Expect = 2.7 Identities = 32/93 (34%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Frame = +3 Query: 723 ASPRTSG*RGCSSSPPAWSRRIAPSKRRSASTCVT----GSTCRRTRLSRWDPPCR*TSP 890 ASP R S SPP R +KRRS S S R TR +R P + SP Sbjct: 625 ASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSP 684 Query: 891 VQGLGHSATTSAPGTRR*ACSPRATRRESACPS 989 T+S+P R S RR+S PS Sbjct: 685 SPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPS 717
>Q5ZMJ9:SRRM1_CHICK Serine/arginine repetitive matrix protein 1 - Gallus gallus| (Chicken) Length = 888 Score = 33.9 bits (76), Expect = 2.7 Identities = 31/93 (33%), Positives = 37/93 (39%), Gaps = 4/93 (4%) Frame = +3 Query: 723 ASPRTSG*RGCSSSPPAWSRRIAPSKRRSASTCVT----GSTCRRTRLSRWDPPCR*TSP 890 ASP R S SPP R +KRRS S R R +R P + SP Sbjct: 618 ASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNRETRSPPQNKRDSP 677 Query: 891 VQGLGHSATTSAPGTRR*ACSPRATRRESACPS 989 S T+S+P R S RR+S PS Sbjct: 678 SPRPRASHTSSSPPPLRRGASASPQRRQSPSPS 710
>Q5R5Q2:SRRM1_PONPY Serine/arginine repetitive matrix protein 1 - Pongo pygmaeus| (Orangutan) Length = 917 Score = 33.5 bits (75), Expect = 3.5 Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Frame = +3 Query: 723 ASPRTSG*RGCSSSPPAWSRRIAPSKRRSASTCVT----GSTCRRTRLSRWDPPCR*TSP 890 ASP R S SPP R +KRRS S S R TR +R P + SP Sbjct: 639 ASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSP 698 Query: 891 VQGLGHSATTSAPGTRR*ACSPRATRRESACPS 989 T+S P RR S RR+S PS Sbjct: 699 SPRPRAPQTSSPPPVRR-GASSSPQRRQSPSPS 730
>Q5ZQU2:NPAS2_CHICK Neuronal PAS domain-containing protein 2 - Gallus gallus (Chicken)| Length = 815 Score = 33.1 bits (74), Expect = 4.6 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Frame = +2 Query: 1277 QIPR*NLPSELPAGVKRPS-SNLPCAETSVSLSRSGRRAETVAGAPTAGAKHKQARAIKV 1453 Q P+ +EL G RP+ S S SLSR G + GA AG H Q ++ Sbjct: 607 QGPKAERSTELTTGSSRPTRSTATLFGPSTSLSRRGPGPSSGPGASAAGCSHDQ----QL 662 Query: 1454 AMVISDMVQPFRRLTVNSQ 1510 +++S +QP + N++ Sbjct: 663 RLLLSQPIQPMMPTSCNAR 681
>Q9Y613:FHOD1_HUMAN FH1/FH2 domain-containing protein 1 - Homo sapiens (Human)| Length = 1164 Score = 33.1 bits (74), Expect = 4.6 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 1/107 (0%) Frame = +2 Query: 1130 TGEAEAAVGPTSSRLPXXXXXXXXXXXXPDNGLARLPTQTTVWPGMFLYQIPR*NLPSEL 1309 TG A + VGPTSS P P +GL ++P + + P + SE Sbjct: 383 TGPA-SPVGPTSSTGPALLTGPASSPVGPPSGLQ---ASVNLFPTISV--APSADTSSER 436 Query: 1310 PAGVKRPSSNLPCAETSVSLSRSGRRAETVAGA-PTAGAKHKQARAI 1447 R N+ AET ++ + RAET+AGA P H AR + Sbjct: 437 SIYKARFLENVAAAETEKQVALAQGRAETLAGAMPNEAGGHPDARQL 483
>Q5NTB3:FA11_BOVIN Coagulation factor XI precursor - Bos taurus (Bovine)| Length = 625 Score = 33.1 bits (74), Expect = 4.6 Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 2/112 (1%) Frame = -3 Query: 447 CRRSVPLWCPHNGSTTDRFLTLPNVKLPNDSDSLAVGAAQSKAECESACQNSCSCEAYTF 268 C+ SVP++C + FL + L + A S C+ C NS C+ +T+ Sbjct: 283 CQHSVPVFCHSSFYRNTDFL----------GEELDIVDADSHEACQKTCTNSIRCQFFTY 332 Query: 267 SAGRCAVWHGELRNLQQLYADSGVSRSSDLYLRLSAIG--LRDLHSAGRKGG 118 S + +S YL+LSA G + LH G G Sbjct: 333 SPSQ----------------ESCNGGKGKCYLKLSANGSPTKILHGTGSISG 368
>Q07954:LRP1_HUMAN Low-density lipoprotein receptor-related protein 1 precursor - Homo| sapiens (Human) Length = 4544 Score = 32.7 bits (73), Expect = 6.0 Identities = 30/113 (26%), Positives = 38/113 (33%), Gaps = 2/113 (1%) Frame = -3 Query: 579 QCDVYALCGAFGVCDLSSQPSCRCPPGFAPASEGDWTLSDWSGGCRRSVPLWCPHNGSTT 400 QC + G S P+CRCP GF T +G C + C N Sbjct: 4235 QCWEHCRNGGTCAASPSGMPTCRCPTGFTGPK---CTQQVCAGYCANNST--CTVNQGNQ 4289 Query: 399 DRFLTLPNVKLPNDSDSLAVGAAQSKAECESACQNS--CSCEAYTFSAGRCAV 247 + LP G ++ C+ A S C C AY F RC V Sbjct: 4290 PQCRCLPGFLGDRCQYRQCSGYCENFGTCQMAADGSRQCRCTAY-FEGSRCEV 4341
>Q9Y6R7:FCGBP_HUMAN IgGFc-binding protein precursor - Homo sapiens (Human)| Length = 5405 Score = 32.7 bits (73), Expect = 6.0 Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 9/105 (8%) Frame = -3 Query: 540 CDLSSQPSCRCPP--------GFAPASEGDWTLSDWSGGCRRSVPLWCPHNGSTTDRFLT 385 C + P CP A A G+W D+ PL CP + Sbjct: 4699 CQVQGHPGGLCPAVATYVAACQAAGAQLGEWRRPDFC-------PLQCPAHS-------- 4743 Query: 384 LPNVKLPNDSDSLAVGAAQSKAECESACQNSCSCEA-YTFSAGRC 253 + +L DS ++ + + CESAC+ C C+A + S C Sbjct: 4744 --HYELCGDSCPVSCPSLSAPEGCESACREGCVCDAGFVLSGDTC 4786
>O88280:SLIT3_RAT Slit homolog 3 protein precursor - Rattus norvegicus (Rat)| Length = 1523 Score = 32.3 bits (72), Expect = 7.8 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -3 Query: 585 TVQCDVYALCGAFGVCDLSSQPSCRCPPGFA 493 T CD Y + +P+CRCPPGFA Sbjct: 1120 TSPCDQYECQNGAQCIVVQQEPTCRCPPGFA 1150
>Q9WVB4:SLIT3_MOUSE Slit homolog 3 protein precursor - Mus musculus (Mouse)| Length = 1523 Score = 32.3 bits (72), Expect = 7.8 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -3 Query: 585 TVQCDVYALCGAFGVCDLSSQPSCRCPPGFA 493 T CD Y + +P+CRCPPGFA Sbjct: 1120 TSPCDQYECQNGAQCIVVQQEPTCRCPPGFA 1150
>O75094:SLIT3_HUMAN Slit homolog 3 protein precursor - Homo sapiens (Human)| Length = 1523 Score = 32.3 bits (72), Expect = 7.8 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -3 Query: 585 TVQCDVYALCGAFGVCDLSSQPSCRCPPGFA 493 T CD Y + +P+CRCPPGFA Sbjct: 1120 TSPCDQYECQNGAQCIVVQQEPTCRCPPGFA 1150
>Q91ZX7:LRP1_MOUSE Low-density lipoprotein receptor-related protein 1 precursor - Mus| musculus (Mouse) Length = 4545 Score = 32.3 bits (72), Expect = 7.8 Identities = 30/113 (26%), Positives = 37/113 (32%), Gaps = 2/113 (1%) Frame = -3 Query: 579 QCDVYALCGAFGVCDLSSQPSCRCPPGFAPASEGDWTLSDWSGGCRRSVPLWCPHNGSTT 400 QC Y G S P+CRCP GF T +G C + C N Sbjct: 4236 QCWEYCHNGGTCAASPSGMPTCRCPTGFTGPK---CTAQVCAGYCSNNST--CTVNQGNQ 4290 Query: 399 DRFLTLPNVKLPNDSDSLAVGAAQSKAECESACQNS--CSCEAYTFSAGRCAV 247 + LP G ++ C+ A S C C Y F RC V Sbjct: 4291 PQCRCLPGFLGDRCQYRQCSGFCENFGTCQMAADGSRQCRCTVY-FEGPRCEV 4342 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 346,913,226 Number of extensions: 7941937 Number of successful extensions: 26654 Number of sequences better than 10.0: 27 Number of HSP's gapped: 26593 Number of HSP's successfully gapped: 32 Length of query: 685 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 565 Effective length of database: 67,771,039 Effective search space: 38290637035 Effective search space used: 38290637035 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
