ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf169n15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001073873.1| Oryza sativa (japonica cultivar-group) Os12g0631200 (Os12g0631200) mRNA, complete cds Length = 2739 Score = 527 bits (266), Expect = e-146 Identities = 533/622 (85%) Strand = Plus / Plus Query: 606 tcgagaggcgaggacgacttcaggagctgctgcggggacgaggaggagtgggaggacacg 665 |||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 910 tcgagaggggaggatgacttcaggagctgctgtggggatgaggatgagtgggaggacacc 969 Query: 666 gaggagtccttcaccgccggcgtctccgaagcggagctcgacgagacctcggtgcggctc 725 |||||||| ||||| ||||||||| || | | ||||| || |||| ||||||| |||| Sbjct: 970 gaggagtcattcacggccggcgtcgccaagggagagcttgatgagagctcggtgaggctg 1029 Query: 726 ttcttcaagggcgtgtcgagctcggacgcggatgggaagaaactgtccgggatcggcgtg 785 ||||||||||||||||||||| | || ||||| |||||||| ||||||||||| || ||| Sbjct: 1030 ttcttcaagggcgtgtcgagccccgaggcggaggggaagaagctgtccgggattggggtg 1089 Query: 786 gtgatggagaggacacctggggtgcctcttcatagggtgcagaagaagctggatttctat 845 |||||||||||| |||||||||||||| | | | |||||||||||| ||||| |||||| Sbjct: 1090 gtgatggagaggtcacctggggtgcctatgcttcaggtgcagaagaaactggacttctat 1149 Query: 846 gtggatgagctggtggctgagcacttggcactcatggatggcctgttggtggcattgcag 905 ||||||||||| ||||| || |||||||| || |||||||||||||||||||| |||||| Sbjct: 1150 gtggatgagctagtggccgatcacttggcgctgatggatggcctgttggtggcgttgcag 1209 Query: 906 aagggcatacgcaagatcttcgccttcactaattcagagaagctatacttccagattgca 965 || || ||||| |||||||| || ||||| ||||| |||||||| ||||| ||||| ||| Sbjct: 1210 aatgggatacggaagatctttgctttcaccaattcggagaagctgtactttcagatcgca 1269 Query: 966 gaagctgaaattcttgaagaccagcttttggtagctctaggacacaggattcttgaactg 1025 |||||||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||| Sbjct: 1270 gaagctgaaattctagaagaccagctcttggtagctttaggacacagaattcttgaactg 1329 Query: 1026 gttgagaagctggaggactttgatctgatactgcttcctagctttgaacttgagaggccg 1085 || || |||||||| ||||||||| | ||| |||||||||||||||| ||||||||||| Sbjct: 1330 gtggaaaagctggaagactttgatataatattgcttcctagctttgagcttgagaggcca 1389 Query: 1086 ttgaagttggccaaagaagcgatagggatcgtgtatgtatctccctatgaggttgccacc 1145 || |||||||||||||||| ||||| ||| ||||| ||||||| || ||||||| |||| Sbjct: 1390 ctgcagttggccaaagaagccataggcatcatgtatctatctccatacgaggttggcacc 1449 Query: 1146 tgcccgctatgctgcgaggaaagacggggttctcacatgatcaaggtgggctgttcccac 1205 || | | ||||| ||||||| ||| || |||| |||||||| ||||| ||| | || Sbjct: 1450 tgttcaatttgctgtgaggaaaaacgaggcgctcagatgatcaaagtgggttgtgctcat 1509 Query: 1206 aaattttgctacagttgcttga 1227 | ||||||||| || ||||||| Sbjct: 1510 acattttgctatagctgcttga 1531 Score = 456 bits (230), Expect = e-124 Identities = 454/528 (85%), Gaps = 3/528 (0%) Strand = Plus / Plus Query: 1266 cctatcagatgcccacagttaaggtgtaaatatcatatttcggctggtgagtgtaaatca 1325 ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| Sbjct: 1570 cctataagatgcccacagttaaggtgtaaatatcatatttctgctagtgagtgtaagtca 1629 Query: 1326 ttccttccggttagcagctacgagtccctggagagcgctttcgcggtgtctggcagcacc 1385 |||||||| |||||| ||||||| || |||||||| ||||| || | |||||| || Sbjct: 1630 ttccttccagttagctgctacgattctctggagagagcttttgcagaagctggca---cc 1686 Query: 1386 tatgacatggagaggttctattgtccctatccaaactgttcggtttcgttagacctcagt 1445 | |||||||| || || |||||||||| |||||||||||| ||| |||| || ||| Sbjct: 1687 tcagacatggaaagattttattgtccctttccaaactgttcagttctactagatcttagt 1746 Query: 1446 caacacttctctagggcgagctcgtccagtcagtcggacctcaattgcatcgagtgcccg 1505 || ||||||||||| || || | || |||||||| || |||||||| | |||||||| Sbjct: 1747 cagcacttctctagagcaagtacatcaagtcagtcagatctcaattgtgttgagtgccca 1806 Query: 1506 gaatgccatggagatatctgtatcaactgtggggtgccatggcacatcatgatggggtgt 1565 ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| ||| Sbjct: 1807 gaatgccatagagatatctgtatcaactgtggagtgccatggcatgtcatgatgggctgt 1866 Query: 1566 gacgagtaccagagccttcctgtcgaggaaagaggtgcaggagacttatctttgcatcgg 1625 || |||||||||||| | ||||| || ||||||| |||||||||| | |||||||||||| Sbjct: 1867 gatgagtaccagagcttgcctgttgatgaaagagatgcaggagacctgtctttgcatcgg 1926 Query: 1626 ctagcacaaaacaatagttggaggcgttgtcagagatgtcgacggatgatcgaactaacg 1685 ||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 1927 ctagcacaaaacaataggtggaggcgttgtcagagatgccgacgaatgattgaactcaca 1986 Query: 1686 caaggctgcttccacatgacttgctggtgtggccatgagttctgctactcctgtggcgcc 1745 |||||||||||||| |||| ||||||||| || || |||||||||||||||||||||||| Sbjct: 1987 caaggctgcttccatatgaattgctggtgcgggcacgagttctgctactcctgtggcgcc 2046 Query: 1746 gagtacaacaacggcgtacaggcatgccagtgcgttttctgggacgaa 1793 ||||||| ||| || ||||| ||||||| || ||||||||||||||| Sbjct: 2047 gagtacaccaatggtatacagacatgccaatgtgttttctgggacgaa 2094 Score = 115 bits (58), Expect = 7e-22 Identities = 111/128 (86%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 1985 gtcgccgccccgctgcgcggcagactcgtacatcgttgacaccatgaaggacctgcacca 2044 |||||||||||||||||| | | || || ||| ||||||||||||||||||| ||||| Sbjct: 2274 gtcgccgccccgctgcgccg---attcatatatcattgacaccatgaaggaccttcacca 2330 Query: 2045 gctgccgtggctcgagcggttcgtgtcggtgatgagcgacacctacaacgacgactacat 2104 |||||| ||||||||||||||||| |||||||| || |||| |||||| || || ||||| Sbjct: 2331 gctgccatggctcgagcggttcgtttcggtgatcagtgacagctacaatgaagattacat 2390 Query: 2105 ccagtgaa 2112 |||||||| Sbjct: 2391 ccagtgaa 2398 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1836 gagatttgggcgtgggacacctttgactgcatgcccacggccgccgacggctactcggag 1895 ||||| ||||| |||||||| || ||||||||||| || ||| ||| || ||||||||| Sbjct: 2140 gagatatgggcatgggacacgttcgactgcatgccaaccgccatcgaagggtactcggag 2199 Query: 1896 caggagcgggcacagctggctctcatccagcggttcct 1933 |||||| | || |||||||||||||| ||| ||||||| Sbjct: 2200 caggagagagctcagctggctctcattcagaggttcct 2237 Score = 73.8 bits (37), Expect = 3e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 327 tggaattcgcgctgtggagctccgcctggtgcttcctggccatcttctccgtcaacttct 386 ||||||||||| ||||||||||| |||||||||| |||||||| |||||| ||| |||| Sbjct: 457 tggaattcgcgatgtggagctccttctggtgcttcatggccatcctctccgccaatttct 516 Query: 387 gagcc 391 ||||| Sbjct: 517 gagcc 521
>dbj|AK101710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060L17, full insert sequence Length = 2739 Score = 527 bits (266), Expect = e-146 Identities = 533/622 (85%) Strand = Plus / Plus Query: 606 tcgagaggcgaggacgacttcaggagctgctgcggggacgaggaggagtgggaggacacg 665 |||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 911 tcgagaggggaggatgacttcaggagctgctgtggggatgaggatgagtgggaggacacc 970 Query: 666 gaggagtccttcaccgccggcgtctccgaagcggagctcgacgagacctcggtgcggctc 725 |||||||| ||||| ||||||||| || | | ||||| || |||| ||||||| |||| Sbjct: 971 gaggagtcattcacggccggcgtcgccaagggagagcttgatgagagctcggtgaggctg 1030 Query: 726 ttcttcaagggcgtgtcgagctcggacgcggatgggaagaaactgtccgggatcggcgtg 785 ||||||||||||||||||||| | || ||||| |||||||| ||||||||||| || ||| Sbjct: 1031 ttcttcaagggcgtgtcgagccccgaggcggaggggaagaagctgtccgggattggggtg 1090 Query: 786 gtgatggagaggacacctggggtgcctcttcatagggtgcagaagaagctggatttctat 845 |||||||||||| |||||||||||||| | | | |||||||||||| ||||| |||||| Sbjct: 1091 gtgatggagaggtcacctggggtgcctatgcttcaggtgcagaagaaactggacttctat 1150 Query: 846 gtggatgagctggtggctgagcacttggcactcatggatggcctgttggtggcattgcag 905 ||||||||||| ||||| || |||||||| || |||||||||||||||||||| |||||| Sbjct: 1151 gtggatgagctagtggccgatcacttggcgctgatggatggcctgttggtggcgttgcag 1210 Query: 906 aagggcatacgcaagatcttcgccttcactaattcagagaagctatacttccagattgca 965 || || ||||| |||||||| || ||||| ||||| |||||||| ||||| ||||| ||| Sbjct: 1211 aatgggatacggaagatctttgctttcaccaattcggagaagctgtactttcagatcgca 1270 Query: 966 gaagctgaaattcttgaagaccagcttttggtagctctaggacacaggattcttgaactg 1025 |||||||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||| Sbjct: 1271 gaagctgaaattctagaagaccagctcttggtagctttaggacacagaattcttgaactg 1330 Query: 1026 gttgagaagctggaggactttgatctgatactgcttcctagctttgaacttgagaggccg 1085 || || |||||||| ||||||||| | ||| |||||||||||||||| ||||||||||| Sbjct: 1331 gtggaaaagctggaagactttgatataatattgcttcctagctttgagcttgagaggcca 1390 Query: 1086 ttgaagttggccaaagaagcgatagggatcgtgtatgtatctccctatgaggttgccacc 1145 || |||||||||||||||| ||||| ||| ||||| ||||||| || ||||||| |||| Sbjct: 1391 ctgcagttggccaaagaagccataggcatcatgtatctatctccatacgaggttggcacc 1450 Query: 1146 tgcccgctatgctgcgaggaaagacggggttctcacatgatcaaggtgggctgttcccac 1205 || | | ||||| ||||||| ||| || |||| |||||||| ||||| ||| | || Sbjct: 1451 tgttcaatttgctgtgaggaaaaacgaggcgctcagatgatcaaagtgggttgtgctcat 1510 Query: 1206 aaattttgctacagttgcttga 1227 | ||||||||| || ||||||| Sbjct: 1511 acattttgctatagctgcttga 1532 Score = 456 bits (230), Expect = e-124 Identities = 454/528 (85%), Gaps = 3/528 (0%) Strand = Plus / Plus Query: 1266 cctatcagatgcccacagttaaggtgtaaatatcatatttcggctggtgagtgtaaatca 1325 ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| Sbjct: 1571 cctataagatgcccacagttaaggtgtaaatatcatatttctgctagtgagtgtaagtca 1630 Query: 1326 ttccttccggttagcagctacgagtccctggagagcgctttcgcggtgtctggcagcacc 1385 |||||||| |||||| ||||||| || |||||||| ||||| || | |||||| || Sbjct: 1631 ttccttccagttagctgctacgattctctggagagagcttttgcagaagctggca---cc 1687 Query: 1386 tatgacatggagaggttctattgtccctatccaaactgttcggtttcgttagacctcagt 1445 | |||||||| || || |||||||||| |||||||||||| ||| |||| || ||| Sbjct: 1688 tcagacatggaaagattttattgtccctttccaaactgttcagttctactagatcttagt 1747 Query: 1446 caacacttctctagggcgagctcgtccagtcagtcggacctcaattgcatcgagtgcccg 1505 || ||||||||||| || || | || |||||||| || |||||||| | |||||||| Sbjct: 1748 cagcacttctctagagcaagtacatcaagtcagtcagatctcaattgtgttgagtgccca 1807 Query: 1506 gaatgccatggagatatctgtatcaactgtggggtgccatggcacatcatgatggggtgt 1565 ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| ||| Sbjct: 1808 gaatgccatagagatatctgtatcaactgtggagtgccatggcatgtcatgatgggctgt 1867 Query: 1566 gacgagtaccagagccttcctgtcgaggaaagaggtgcaggagacttatctttgcatcgg 1625 || |||||||||||| | ||||| || ||||||| |||||||||| | |||||||||||| Sbjct: 1868 gatgagtaccagagcttgcctgttgatgaaagagatgcaggagacctgtctttgcatcgg 1927 Query: 1626 ctagcacaaaacaatagttggaggcgttgtcagagatgtcgacggatgatcgaactaacg 1685 ||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 1928 ctagcacaaaacaataggtggaggcgttgtcagagatgccgacgaatgattgaactcaca 1987 Query: 1686 caaggctgcttccacatgacttgctggtgtggccatgagttctgctactcctgtggcgcc 1745 |||||||||||||| |||| ||||||||| || || |||||||||||||||||||||||| Sbjct: 1988 caaggctgcttccatatgaattgctggtgcgggcacgagttctgctactcctgtggcgcc 2047 Query: 1746 gagtacaacaacggcgtacaggcatgccagtgcgttttctgggacgaa 1793 ||||||| ||| || ||||| ||||||| || ||||||||||||||| Sbjct: 2048 gagtacaccaatggtatacagacatgccaatgtgttttctgggacgaa 2095 Score = 115 bits (58), Expect = 7e-22 Identities = 111/128 (86%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 1985 gtcgccgccccgctgcgcggcagactcgtacatcgttgacaccatgaaggacctgcacca 2044 |||||||||||||||||| | | || || ||| ||||||||||||||||||| ||||| Sbjct: 2275 gtcgccgccccgctgcgccg---attcatatatcattgacaccatgaaggaccttcacca 2331 Query: 2045 gctgccgtggctcgagcggttcgtgtcggtgatgagcgacacctacaacgacgactacat 2104 |||||| ||||||||||||||||| |||||||| || |||| |||||| || || ||||| Sbjct: 2332 gctgccatggctcgagcggttcgtttcggtgatcagtgacagctacaatgaagattacat 2391 Query: 2105 ccagtgaa 2112 |||||||| Sbjct: 2392 ccagtgaa 2399 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1836 gagatttgggcgtgggacacctttgactgcatgcccacggccgccgacggctactcggag 1895 ||||| ||||| |||||||| || ||||||||||| || ||| ||| || ||||||||| Sbjct: 2141 gagatatgggcatgggacacgttcgactgcatgccaaccgccatcgaagggtactcggag 2200 Query: 1896 caggagcgggcacagctggctctcatccagcggttcct 1933 |||||| | || |||||||||||||| ||| ||||||| Sbjct: 2201 caggagagagctcagctggctctcattcagaggttcct 2238 Score = 73.8 bits (37), Expect = 3e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 327 tggaattcgcgctgtggagctccgcctggtgcttcctggccatcttctccgtcaacttct 386 ||||||||||| ||||||||||| |||||||||| |||||||| |||||| ||| |||| Sbjct: 458 tggaattcgcgatgtggagctccttctggtgcttcatggccatcctctccgccaatttct 517 Query: 387 gagcc 391 ||||| Sbjct: 518 gagcc 522
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 377 bits (190), Expect = e-100 Identities = 384/448 (85%), Gaps = 3/448 (0%) Strand = Plus / Minus Query: 1266 cctatcagatgcccacagttaaggtgtaaatatcatatttcggctggtgagtgtaaatca 1325 ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| Sbjct: 27063460 cctataagatgcccacagttaaggtgtaaatatcatatttctgctagtgagtgtaagtca 27063401 Query: 1326 ttccttccggttagcagctacgagtccctggagagcgctttcgcggtgtctggcagcacc 1385 |||||||| |||||| ||||||| || |||||||| ||||| || | |||||| || Sbjct: 27063400 ttccttccagttagctgctacgattctctggagagagcttttgcagaagctggca---cc 27063344 Query: 1386 tatgacatggagaggttctattgtccctatccaaactgttcggtttcgttagacctcagt 1445 | |||||||| || || |||||||||| |||||||||||| ||| |||| || ||| Sbjct: 27063343 tcagacatggaaagattttattgtccctttccaaactgttcagttctactagatcttagt 27063284 Query: 1446 caacacttctctagggcgagctcgtccagtcagtcggacctcaattgcatcgagtgcccg 1505 || ||||||||||| || || | || |||||||| || |||||||| | |||||||| Sbjct: 27063283 cagcacttctctagagcaagtacatcaagtcagtcagatctcaattgtgttgagtgccca 27063224 Query: 1506 gaatgccatggagatatctgtatcaactgtggggtgccatggcacatcatgatggggtgt 1565 ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| ||| Sbjct: 27063223 gaatgccatagagatatctgtatcaactgtggagtgccatggcatgtcatgatgggctgt 27063164 Query: 1566 gacgagtaccagagccttcctgtcgaggaaagaggtgcaggagacttatctttgcatcgg 1625 || |||||||||||| | ||||| || ||||||| |||||||||| | |||||||||||| Sbjct: 27063163 gatgagtaccagagcttgcctgttgatgaaagagatgcaggagacctgtctttgcatcgg 27063104 Query: 1626 ctagcacaaaacaatagttggaggcgttgtcagagatgtcgacggatgatcgaactaacg 1685 ||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 27063103 ctagcacaaaacaataggtggaggcgttgtcagagatgccgacgaatgattgaactcaca 27063044 Query: 1686 caaggctgcttccacatgacttgctggt 1713 |||||||||||||| |||| |||||||| Sbjct: 27063043 caaggctgcttccatatgaattgctggt 27063016 Score = 321 bits (162), Expect = 6e-84 Identities = 303/350 (86%) Strand = Plus / Minus Query: 606 tcgagaggcgaggacgacttcaggagctgctgcggggacgaggaggagtgggaggacacg 665 |||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 27064786 tcgagaggggaggatgacttcaggagctgctgtggggatgaggatgagtgggaggacacc 27064727 Query: 666 gaggagtccttcaccgccggcgtctccgaagcggagctcgacgagacctcggtgcggctc 725 |||||||| ||||| ||||||||| || | | ||||| || |||| ||||||| |||| Sbjct: 27064726 gaggagtcattcacggccggcgtcgccaagggagagcttgatgagagctcggtgaggctg 27064667 Query: 726 ttcttcaagggcgtgtcgagctcggacgcggatgggaagaaactgtccgggatcggcgtg 785 ||||||||||||||||||||| | || ||||| |||||||| ||||||||||| || ||| Sbjct: 27064666 ttcttcaagggcgtgtcgagccccgaggcggaggggaagaagctgtccgggattggggtg 27064607 Query: 786 gtgatggagaggacacctggggtgcctcttcatagggtgcagaagaagctggatttctat 845 |||||||||||| |||||||||||||| | | | |||||||||||| ||||| |||||| Sbjct: 27064606 gtgatggagaggtcacctggggtgcctatgcttcaggtgcagaagaaactggacttctat 27064547 Query: 846 gtggatgagctggtggctgagcacttggcactcatggatggcctgttggtggcattgcag 905 ||||||||||| ||||| || |||||||| || |||||||||||||||||||| |||||| Sbjct: 27064546 gtggatgagctagtggccgatcacttggcgctgatggatggcctgttggtggcgttgcag 27064487 Query: 906 aagggcatacgcaagatcttcgccttcactaattcagagaagctatactt 955 || || ||||| |||||||| || ||||| ||||| |||||||| ||||| Sbjct: 27064486 aatgggatacggaagatctttgctttcaccaattcggagaagctgtactt 27064437 Score = 212 bits (107), Expect = 4e-51 Identities = 230/271 (84%) Strand = Plus / Minus Query: 957 cagattgcagaagctgaaattcttgaagaccagcttttggtagctctaggacacaggatt 1016 ||||| ||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||| Sbjct: 27063769 cagatcgcagaagctgaaattctagaagaccagctcttggtagctttaggacacagaatt 27063710 Query: 1017 cttgaactggttgagaagctggaggactttgatctgatactgcttcctagctttgaactt 1076 ||||||||||| || |||||||| ||||||||| | ||| |||||||||||||||| ||| Sbjct: 27063709 cttgaactggtggaaaagctggaagactttgatataatattgcttcctagctttgagctt 27063650 Query: 1077 gagaggccgttgaagttggccaaagaagcgatagggatcgtgtatgtatctccctatgag 1136 |||||||| || |||||||||||||||| ||||| ||| ||||| ||||||| || ||| Sbjct: 27063649 gagaggccactgcagttggccaaagaagccataggcatcatgtatctatctccatacgag 27063590 Query: 1137 gttgccacctgcccgctatgctgcgaggaaagacggggttctcacatgatcaaggtgggc 1196 |||| |||||| | | ||||| ||||||| ||| || |||| |||||||| ||||| Sbjct: 27063589 gttggcacctgttcaatttgctgtgaggaaaaacgaggcgctcagatgatcaaagtgggt 27063530 Query: 1197 tgttcccacaaattttgctacagttgcttga 1227 ||| | || | ||||||||| || ||||||| Sbjct: 27063529 tgtgctcatacattttgctatagctgcttga 27063499 Score = 115 bits (58), Expect = 7e-22 Identities = 111/128 (86%), Gaps = 3/128 (2%) Strand = Plus / Minus Query: 1985 gtcgccgccccgctgcgcggcagactcgtacatcgttgacaccatgaaggacctgcacca 2044 |||||||||||||||||| | | || || ||| ||||||||||||||||||| ||||| Sbjct: 27061917 gtcgccgccccgctgcgccg---attcatatatcattgacaccatgaaggaccttcacca 27061861 Query: 2045 gctgccgtggctcgagcggttcgtgtcggtgatgagcgacacctacaacgacgactacat 2104 |||||| ||||||||||||||||| |||||||| || |||| |||||| || || ||||| Sbjct: 27061860 gctgccatggctcgagcggttcgtttcggtgatcagtgacagctacaatgaagattacat 27061801 Query: 2105 ccagtgaa 2112 |||||||| Sbjct: 27061800 ccagtgaa 27061793 Score = 87.7 bits (44), Expect = 2e-13 Identities = 65/72 (90%) Strand = Plus / Minus Query: 1722 gagttctgctactcctgtggcgccgagtacaacaacggcgtacaggcatgccagtgcgtt 1781 ||||||||||||||||||||||||||||||| ||| || ||||| ||||||| || ||| Sbjct: 27062168 gagttctgctactcctgtggcgccgagtacaccaatggtatacagacatgccaatgtgtt 27062109 Query: 1782 ttctgggacgaa 1793 |||||||||||| Sbjct: 27062108 ttctgggacgaa 27062097 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 1836 gagatttgggcgtgggacacctttgactgcatgcccacggccgccgacggctactcggag 1895 ||||| ||||| |||||||| || ||||||||||| || ||| ||| || ||||||||| Sbjct: 27062051 gagatatgggcatgggacacgttcgactgcatgccaaccgccatcgaagggtactcggag 27061992 Query: 1896 caggagcgggcacagctggctctcatccagcggttcct 1933 |||||| | || |||||||||||||| ||| ||||||| Sbjct: 27061991 caggagagagctcagctggctctcattcagaggttcct 27061954 Score = 73.8 bits (37), Expect = 3e-09 Identities = 58/65 (89%) Strand = Plus / Minus Query: 327 tggaattcgcgctgtggagctccgcctggtgcttcctggccatcttctccgtcaacttct 386 ||||||||||| ||||||||||| |||||||||| |||||||| |||||| ||| |||| Sbjct: 27065239 tggaattcgcgatgtggagctccttctggtgcttcatggccatcctctccgccaatttct 27065180 Query: 387 gagcc 391 ||||| Sbjct: 27065179 gagcc 27065175
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 377 bits (190), Expect = e-100 Identities = 384/448 (85%), Gaps = 3/448 (0%) Strand = Plus / Plus Query: 1266 cctatcagatgcccacagttaaggtgtaaatatcatatttcggctggtgagtgtaaatca 1325 ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| Sbjct: 92777 cctataagatgcccacagttaaggtgtaaatatcatatttctgctagtgagtgtaagtca 92836 Query: 1326 ttccttccggttagcagctacgagtccctggagagcgctttcgcggtgtctggcagcacc 1385 |||||||| |||||| ||||||| || |||||||| ||||| || | |||||| || Sbjct: 92837 ttccttccagttagctgctacgattctctggagagagcttttgcagaagctggca---cc 92893 Query: 1386 tatgacatggagaggttctattgtccctatccaaactgttcggtttcgttagacctcagt 1445 | |||||||| || || |||||||||| |||||||||||| ||| |||| || ||| Sbjct: 92894 tcagacatggaaagattttattgtccctttccaaactgttcagttctactagatcttagt 92953 Query: 1446 caacacttctctagggcgagctcgtccagtcagtcggacctcaattgcatcgagtgcccg 1505 || ||||||||||| || || | || |||||||| || |||||||| | |||||||| Sbjct: 92954 cagcacttctctagagcaagtacatcaagtcagtcagatctcaattgtgttgagtgccca 93013 Query: 1506 gaatgccatggagatatctgtatcaactgtggggtgccatggcacatcatgatggggtgt 1565 ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| ||| Sbjct: 93014 gaatgccatagagatatctgtatcaactgtggagtgccatggcatgtcatgatgggctgt 93073 Query: 1566 gacgagtaccagagccttcctgtcgaggaaagaggtgcaggagacttatctttgcatcgg 1625 || |||||||||||| | ||||| || ||||||| |||||||||| | |||||||||||| Sbjct: 93074 gatgagtaccagagcttgcctgttgatgaaagagatgcaggagacctgtctttgcatcgg 93133 Query: 1626 ctagcacaaaacaatagttggaggcgttgtcagagatgtcgacggatgatcgaactaacg 1685 ||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 93134 ctagcacaaaacaataggtggaggcgttgtcagagatgccgacgaatgattgaactcaca 93193 Query: 1686 caaggctgcttccacatgacttgctggt 1713 |||||||||||||| |||| |||||||| Sbjct: 93194 caaggctgcttccatatgaattgctggt 93221 Score = 321 bits (162), Expect = 6e-84 Identities = 303/350 (86%) Strand = Plus / Plus Query: 606 tcgagaggcgaggacgacttcaggagctgctgcggggacgaggaggagtgggaggacacg 665 |||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 91451 tcgagaggggaggatgacttcaggagctgctgtggggatgaggatgagtgggaggacacc 91510 Query: 666 gaggagtccttcaccgccggcgtctccgaagcggagctcgacgagacctcggtgcggctc 725 |||||||| ||||| ||||||||| || | | ||||| || |||| ||||||| |||| Sbjct: 91511 gaggagtcattcacggccggcgtcgccaagggagagcttgatgagagctcggtgaggctg 91570 Query: 726 ttcttcaagggcgtgtcgagctcggacgcggatgggaagaaactgtccgggatcggcgtg 785 ||||||||||||||||||||| | || ||||| |||||||| ||||||||||| || ||| Sbjct: 91571 ttcttcaagggcgtgtcgagccccgaggcggaggggaagaagctgtccgggattggggtg 91630 Query: 786 gtgatggagaggacacctggggtgcctcttcatagggtgcagaagaagctggatttctat 845 |||||||||||| |||||||||||||| | | | |||||||||||| ||||| |||||| Sbjct: 91631 gtgatggagaggtcacctggggtgcctatgcttcaggtgcagaagaaactggacttctat 91690 Query: 846 gtggatgagctggtggctgagcacttggcactcatggatggcctgttggtggcattgcag 905 ||||||||||| ||||| || |||||||| || |||||||||||||||||||| |||||| Sbjct: 91691 gtggatgagctagtggccgatcacttggcgctgatggatggcctgttggtggcgttgcag 91750 Query: 906 aagggcatacgcaagatcttcgccttcactaattcagagaagctatactt 955 || || ||||| |||||||| || ||||| ||||| |||||||| ||||| Sbjct: 91751 aatgggatacggaagatctttgctttcaccaattcggagaagctgtactt 91800 Score = 212 bits (107), Expect = 4e-51 Identities = 230/271 (84%) Strand = Plus / Plus Query: 957 cagattgcagaagctgaaattcttgaagaccagcttttggtagctctaggacacaggatt 1016 ||||| ||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||| Sbjct: 92468 cagatcgcagaagctgaaattctagaagaccagctcttggtagctttaggacacagaatt 92527 Query: 1017 cttgaactggttgagaagctggaggactttgatctgatactgcttcctagctttgaactt 1076 ||||||||||| || |||||||| ||||||||| | ||| |||||||||||||||| ||| Sbjct: 92528 cttgaactggtggaaaagctggaagactttgatataatattgcttcctagctttgagctt 92587 Query: 1077 gagaggccgttgaagttggccaaagaagcgatagggatcgtgtatgtatctccctatgag 1136 |||||||| || |||||||||||||||| ||||| ||| ||||| ||||||| || ||| Sbjct: 92588 gagaggccactgcagttggccaaagaagccataggcatcatgtatctatctccatacgag 92647 Query: 1137 gttgccacctgcccgctatgctgcgaggaaagacggggttctcacatgatcaaggtgggc 1196 |||| |||||| | | ||||| ||||||| ||| || |||| |||||||| ||||| Sbjct: 92648 gttggcacctgttcaatttgctgtgaggaaaaacgaggcgctcagatgatcaaagtgggt 92707 Query: 1197 tgttcccacaaattttgctacagttgcttga 1227 ||| | || | ||||||||| || ||||||| Sbjct: 92708 tgtgctcatacattttgctatagctgcttga 92738 Score = 115 bits (58), Expect = 7e-22 Identities = 111/128 (86%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 1985 gtcgccgccccgctgcgcggcagactcgtacatcgttgacaccatgaaggacctgcacca 2044 |||||||||||||||||| | | || || ||| ||||||||||||||||||| ||||| Sbjct: 94320 gtcgccgccccgctgcgccg---attcatatatcattgacaccatgaaggaccttcacca 94376 Query: 2045 gctgccgtggctcgagcggttcgtgtcggtgatgagcgacacctacaacgacgactacat 2104 |||||| ||||||||||||||||| |||||||| || |||| |||||| || || ||||| Sbjct: 94377 gctgccatggctcgagcggttcgtttcggtgatcagtgacagctacaatgaagattacat 94436 Query: 2105 ccagtgaa 2112 |||||||| Sbjct: 94437 ccagtgaa 94444 Score = 87.7 bits (44), Expect = 2e-13 Identities = 65/72 (90%) Strand = Plus / Plus Query: 1722 gagttctgctactcctgtggcgccgagtacaacaacggcgtacaggcatgccagtgcgtt 1781 ||||||||||||||||||||||||||||||| ||| || ||||| ||||||| || ||| Sbjct: 94069 gagttctgctactcctgtggcgccgagtacaccaatggtatacagacatgccaatgtgtt 94128 Query: 1782 ttctgggacgaa 1793 |||||||||||| Sbjct: 94129 ttctgggacgaa 94140 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1836 gagatttgggcgtgggacacctttgactgcatgcccacggccgccgacggctactcggag 1895 ||||| ||||| |||||||| || ||||||||||| || ||| ||| || ||||||||| Sbjct: 94186 gagatatgggcatgggacacgttcgactgcatgccaaccgccatcgaagggtactcggag 94245 Query: 1896 caggagcgggcacagctggctctcatccagcggttcct 1933 |||||| | || |||||||||||||| ||| ||||||| Sbjct: 94246 caggagagagctcagctggctctcattcagaggttcct 94283 Score = 73.8 bits (37), Expect = 3e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 327 tggaattcgcgctgtggagctccgcctggtgcttcctggccatcttctccgtcaacttct 386 ||||||||||| ||||||||||| |||||||||| |||||||| |||||| ||| |||| Sbjct: 90998 tggaattcgcgatgtggagctccttctggtgcttcatggccatcctctccgccaatttct 91057 Query: 387 gagcc 391 ||||| Sbjct: 91058 gagcc 91062
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 377 bits (190), Expect = e-100 Identities = 384/448 (85%), Gaps = 3/448 (0%) Strand = Plus / Minus Query: 1266 cctatcagatgcccacagttaaggtgtaaatatcatatttcggctggtgagtgtaaatca 1325 ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| Sbjct: 2348 cctataagatgcccacagttaaggtgtaaatatcatatttctgctagtgagtgtaagtca 2289 Query: 1326 ttccttccggttagcagctacgagtccctggagagcgctttcgcggtgtctggcagcacc 1385 |||||||| |||||| ||||||| || |||||||| ||||| || | |||||| || Sbjct: 2288 ttccttccagttagctgctacgattctctggagagagcttttgcagaagctggca---cc 2232 Query: 1386 tatgacatggagaggttctattgtccctatccaaactgttcggtttcgttagacctcagt 1445 | |||||||| || || |||||||||| |||||||||||| ||| |||| || ||| Sbjct: 2231 tcagacatggaaagattttattgtccctttccaaactgttcagttctactagatcttagt 2172 Query: 1446 caacacttctctagggcgagctcgtccagtcagtcggacctcaattgcatcgagtgcccg 1505 || ||||||||||| || || | || |||||||| || |||||||| | |||||||| Sbjct: 2171 cagcacttctctagagcaagtacatcaagtcagtcagatctcaattgtgttgagtgccca 2112 Query: 1506 gaatgccatggagatatctgtatcaactgtggggtgccatggcacatcatgatggggtgt 1565 ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| ||| Sbjct: 2111 gaatgccatagagatatctgtatcaactgtggagtgccatggcatgtcatgatgggctgt 2052 Query: 1566 gacgagtaccagagccttcctgtcgaggaaagaggtgcaggagacttatctttgcatcgg 1625 || |||||||||||| | ||||| || ||||||| |||||||||| | |||||||||||| Sbjct: 2051 gatgagtaccagagcttgcctgttgatgaaagagatgcaggagacctgtctttgcatcgg 1992 Query: 1626 ctagcacaaaacaatagttggaggcgttgtcagagatgtcgacggatgatcgaactaacg 1685 ||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 1991 ctagcacaaaacaataggtggaggcgttgtcagagatgccgacgaatgattgaactcaca 1932 Query: 1686 caaggctgcttccacatgacttgctggt 1713 |||||||||||||| |||| |||||||| Sbjct: 1931 caaggctgcttccatatgaattgctggt 1904 Score = 321 bits (162), Expect = 6e-84 Identities = 303/350 (86%) Strand = Plus / Minus Query: 606 tcgagaggcgaggacgacttcaggagctgctgcggggacgaggaggagtgggaggacacg 665 |||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 3674 tcgagaggggaggatgacttcaggagctgctgtggggatgaggatgagtgggaggacacc 3615 Query: 666 gaggagtccttcaccgccggcgtctccgaagcggagctcgacgagacctcggtgcggctc 725 |||||||| ||||| ||||||||| || | | ||||| || |||| ||||||| |||| Sbjct: 3614 gaggagtcattcacggccggcgtcgccaagggagagcttgatgagagctcggtgaggctg 3555 Query: 726 ttcttcaagggcgtgtcgagctcggacgcggatgggaagaaactgtccgggatcggcgtg 785 ||||||||||||||||||||| | || ||||| |||||||| ||||||||||| || ||| Sbjct: 3554 ttcttcaagggcgtgtcgagccccgaggcggaggggaagaagctgtccgggattggggtg 3495 Query: 786 gtgatggagaggacacctggggtgcctcttcatagggtgcagaagaagctggatttctat 845 |||||||||||| |||||||||||||| | | | |||||||||||| ||||| |||||| Sbjct: 3494 gtgatggagaggtcacctggggtgcctatgcttcaggtgcagaagaaactggacttctat 3435 Query: 846 gtggatgagctggtggctgagcacttggcactcatggatggcctgttggtggcattgcag 905 ||||||||||| ||||| || |||||||| || |||||||||||||||||||| |||||| Sbjct: 3434 gtggatgagctagtggccgatcacttggcgctgatggatggcctgttggtggcgttgcag 3375 Query: 906 aagggcatacgcaagatcttcgccttcactaattcagagaagctatactt 955 || || ||||| |||||||| || ||||| ||||| |||||||| ||||| Sbjct: 3374 aatgggatacggaagatctttgctttcaccaattcggagaagctgtactt 3325 Score = 212 bits (107), Expect = 4e-51 Identities = 230/271 (84%) Strand = Plus / Minus Query: 957 cagattgcagaagctgaaattcttgaagaccagcttttggtagctctaggacacaggatt 1016 ||||| ||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||| Sbjct: 2657 cagatcgcagaagctgaaattctagaagaccagctcttggtagctttaggacacagaatt 2598 Query: 1017 cttgaactggttgagaagctggaggactttgatctgatactgcttcctagctttgaactt 1076 ||||||||||| || |||||||| ||||||||| | ||| |||||||||||||||| ||| Sbjct: 2597 cttgaactggtggaaaagctggaagactttgatataatattgcttcctagctttgagctt 2538 Query: 1077 gagaggccgttgaagttggccaaagaagcgatagggatcgtgtatgtatctccctatgag 1136 |||||||| || |||||||||||||||| ||||| ||| ||||| ||||||| || ||| Sbjct: 2537 gagaggccactgcagttggccaaagaagccataggcatcatgtatctatctccatacgag 2478 Query: 1137 gttgccacctgcccgctatgctgcgaggaaagacggggttctcacatgatcaaggtgggc 1196 |||| |||||| | | ||||| ||||||| ||| || |||| |||||||| ||||| Sbjct: 2477 gttggcacctgttcaatttgctgtgaggaaaaacgaggcgctcagatgatcaaagtgggt 2418 Query: 1197 tgttcccacaaattttgctacagttgcttga 1227 ||| | || | ||||||||| || ||||||| Sbjct: 2417 tgtgctcatacattttgctatagctgcttga 2387 Score = 115 bits (58), Expect = 7e-22 Identities = 111/128 (86%), Gaps = 3/128 (2%) Strand = Plus / Minus Query: 1985 gtcgccgccccgctgcgcggcagactcgtacatcgttgacaccatgaaggacctgcacca 2044 |||||||||||||||||| | | || || ||| ||||||||||||||||||| ||||| Sbjct: 805 gtcgccgccccgctgcgccg---attcatatatcattgacaccatgaaggaccttcacca 749 Query: 2045 gctgccgtggctcgagcggttcgtgtcggtgatgagcgacacctacaacgacgactacat 2104 |||||| ||||||||||||||||| |||||||| || |||| |||||| || || ||||| Sbjct: 748 gctgccatggctcgagcggttcgtttcggtgatcagtgacagctacaatgaagattacat 689 Query: 2105 ccagtgaa 2112 |||||||| Sbjct: 688 ccagtgaa 681 Score = 87.7 bits (44), Expect = 2e-13 Identities = 65/72 (90%) Strand = Plus / Minus Query: 1722 gagttctgctactcctgtggcgccgagtacaacaacggcgtacaggcatgccagtgcgtt 1781 ||||||||||||||||||||||||||||||| ||| || ||||| ||||||| || ||| Sbjct: 1056 gagttctgctactcctgtggcgccgagtacaccaatggtatacagacatgccaatgtgtt 997 Query: 1782 ttctgggacgaa 1793 |||||||||||| Sbjct: 996 ttctgggacgaa 985 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 1836 gagatttgggcgtgggacacctttgactgcatgcccacggccgccgacggctactcggag 1895 ||||| ||||| |||||||| || ||||||||||| || ||| ||| || ||||||||| Sbjct: 939 gagatatgggcatgggacacgttcgactgcatgccaaccgccatcgaagggtactcggag 880 Query: 1896 caggagcgggcacagctggctctcatccagcggttcct 1933 |||||| | || |||||||||||||| ||| ||||||| Sbjct: 879 caggagagagctcagctggctctcattcagaggttcct 842 Score = 73.8 bits (37), Expect = 3e-09 Identities = 58/65 (89%) Strand = Plus / Minus Query: 327 tggaattcgcgctgtggagctccgcctggtgcttcctggccatcttctccgtcaacttct 386 ||||||||||| ||||||||||| |||||||||| |||||||| |||||| ||| |||| Sbjct: 4127 tggaattcgcgatgtggagctccttctggtgcttcatggccatcctctccgccaatttct 4068 Query: 387 gagcc 391 ||||| Sbjct: 4067 gagcc 4063
>dbj|AK104365.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D02, full insert sequence Length = 987 Score = 347 bits (175), Expect = 1e-91 Identities = 307/351 (87%) Strand = Plus / Plus Query: 1443 agtcaacacttctctagggcgagctcgtccagtcagtcggacctcaattgcatcgagtgc 1502 ||||| ||||||||||| || || | || |||||||| || |||||||| | |||||| Sbjct: 14 agtcagcacttctctagagcaagtacatcaagtcagtcagatctcaattgtgttgagtgc 73 Query: 1503 ccggaatgccatggagatatctgtatcaactgtggggtgccatggcacatcatgatgggg 1562 || ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 74 ccagaatgccatagagatatctgtatcaactgtggagtgccatggcatgtcatgatgggc 133 Query: 1563 tgtgacgagtaccagagccttcctgtcgaggaaagaggtgcaggagacttatctttgcat 1622 ||||| |||||||||||| | ||||| || ||||||| |||||||||| | ||||||||| Sbjct: 134 tgtgatgagtaccagagcttgcctgttgatgaaagagatgcaggagacctgtctttgcat 193 Query: 1623 cggctagcacaaaacaatagttggaggcgttgtcagagatgtcgacggatgatcgaacta 1682 |||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 194 cggctagcacaaaacaataggtggaggcgttgtcagagatgccgacgaatgattgaactc 253 Query: 1683 acgcaaggctgcttccacatgacttgctggtgtggccatgagttctgctactcctgtggc 1742 || |||||||||||||| |||| ||||||||| || || ||||||||||||||||||||| Sbjct: 254 acacaaggctgcttccatatgaattgctggtgcgggcacgagttctgctactcctgtggc 313 Query: 1743 gccgagtacaacaacggcgtacaggcatgccagtgcgttttctgggacgaa 1793 |||||||||| ||| || ||||| ||||||| || ||||||||||||||| Sbjct: 314 gccgagtacaccaatggtatacagacatgccaatgtgttttctgggacgaa 364 Score = 115 bits (58), Expect = 7e-22 Identities = 111/128 (86%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 1985 gtcgccgccccgctgcgcggcagactcgtacatcgttgacaccatgaaggacctgcacca 2044 |||||||||||||||||| | | || || ||| ||||||||||||||||||| ||||| Sbjct: 544 gtcgccgccccgctgcgccg---attcatatatcattgacaccatgaaggaccttcacca 600 Query: 2045 gctgccgtggctcgagcggttcgtgtcggtgatgagcgacacctacaacgacgactacat 2104 |||||| ||||||||||||||||| |||||||| || |||| |||||| || || ||||| Sbjct: 601 gctgccatggctcgagcggttcgtttcggtgatcagtgacagctacaatgaagattacat 660 Query: 2105 ccagtgaa 2112 |||||||| Sbjct: 661 ccagtgaa 668 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1836 gagatttgggcgtgggacacctttgactgcatgcccacggccgccgacggctactcggag 1895 ||||| ||||| |||||||| || ||||||||||| || ||| ||| || ||||||||| Sbjct: 410 gagatatgggcatgggacacgttcgactgcatgccaaccgccatcgaagggtactcggag 469 Query: 1896 caggagcgggcacagctggctctcatccagcggttcct 1933 |||||| | || |||||||||||||| ||| ||||||| Sbjct: 470 caggagagagctcagctggctctcattcagaggttcct 507
>dbj|AK060037.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A11, full insert sequence Length = 987 Score = 347 bits (175), Expect = 1e-91 Identities = 307/351 (87%) Strand = Plus / Plus Query: 1443 agtcaacacttctctagggcgagctcgtccagtcagtcggacctcaattgcatcgagtgc 1502 ||||| ||||||||||| || || | || |||||||| || |||||||| | |||||| Sbjct: 14 agtcagcacttctctagagcaagtacatcaagtcagtcagatctcaattgtgttgagtgc 73 Query: 1503 ccggaatgccatggagatatctgtatcaactgtggggtgccatggcacatcatgatgggg 1562 || ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 74 ccagaatgccatagagatatctgtatcaactgtggagtgccatggcatgtcatgatgggc 133 Query: 1563 tgtgacgagtaccagagccttcctgtcgaggaaagaggtgcaggagacttatctttgcat 1622 ||||| |||||||||||| | ||||| || ||||||| |||||||||| | ||||||||| Sbjct: 134 tgtgatgagtaccagagcttgcctgttgatgaaagagatgcaggagacctgtctttgcat 193 Query: 1623 cggctagcacaaaacaatagttggaggcgttgtcagagatgtcgacggatgatcgaacta 1682 |||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 194 cggctagcacaaaacaataggtggaggcgttgtcagagatgccgacgaatgattgaactc 253 Query: 1683 acgcaaggctgcttccacatgacttgctggtgtggccatgagttctgctactcctgtggc 1742 || |||||||||||||| |||| ||||||||| || || ||||||||||||||||||||| Sbjct: 254 acacaaggctgcttccatatgaattgctggtgcgggcacgagttctgctactcctgtggc 313 Query: 1743 gccgagtacaacaacggcgtacaggcatgccagtgcgttttctgggacgaa 1793 |||||||||| ||| || ||||| ||||||| || ||||||||||||||| Sbjct: 314 gccgagtacaccaatggtatacagacatgccaatgtgttttctgggacgaa 364 Score = 115 bits (58), Expect = 7e-22 Identities = 111/128 (86%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 1985 gtcgccgccccgctgcgcggcagactcgtacatcgttgacaccatgaaggacctgcacca 2044 |||||||||||||||||| | | || || ||| ||||||||||||||||||| ||||| Sbjct: 544 gtcgccgccccgctgcgccg---attcatatatcattgacaccatgaaggaccttcacca 600 Query: 2045 gctgccgtggctcgagcggttcgtgtcggtgatgagcgacacctacaacgacgactacat 2104 |||||| ||||||||||||||||| |||||||| || |||| |||||| || || ||||| Sbjct: 601 gctgccatggctcgagcggttcgtttcggtgatcagtgacagctacaatgaagattacat 660 Query: 2105 ccagtgaa 2112 |||||||| Sbjct: 661 ccagtgaa 668 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1836 gagatttgggcgtgggacacctttgactgcatgcccacggccgccgacggctactcggag 1895 ||||| ||||| |||||||| || ||||||||||| || ||| ||| || ||||||||| Sbjct: 410 gagatatgggcatgggacacgttcgactgcatgccaaccgccatcgaagggtactcggag 469 Query: 1896 caggagcgggcacagctggctctcatccagcggttcct 1933 |||||| | || |||||||||||||| ||| ||||||| Sbjct: 470 caggagagagctcagctggctctcattcagaggttcct 507
>gb|AY111721.1| Zea mays CL4488_1 mRNA sequence Length = 577 Score = 139 bits (70), Expect = 5e-29 Identities = 108/120 (90%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 1985 gtcgccgccccgctgcgcggcagactcgtacatcgttgacaccatgaaggacctgcacca 2044 |||||||||||||||||| | |||| |||||||| ||||||||||||||||| ||||| Sbjct: 117 gtcgccgccccgctgcgccg---actcctacatcgtcgacaccatgaaggacctccacca 173 Query: 2045 gctgccgtggctcgagcggttcgtgtcggtgatgagcgacacctacaacgacgactacat 2104 ||| || |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 174 gctcccatggctcgagcggttcgtgtcggtgatcagcgacacgtacaacgatgactacat 233 Score = 58.0 bits (29), Expect = 1e-04 Identities = 59/69 (85%) Strand = Plus / Plus Query: 1857 tttgactgcatgcccacggccgccgacggctactcggagcaggagcgggcacagctggct 1916 |||||||||||||| || |||| || || ||||||||||||||| | || |||||||| Sbjct: 5 tttgactgcatgccgaccgccgtggagggatactcggagcaggagagagcgcagctggca 64 Query: 1917 ctcatccag 1925 ||||||||| Sbjct: 65 ctcatccag 73
>dbj|AK228826.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-14-O13 Length = 1861 Score = 54.0 bits (27), Expect = 0.002 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1686 caaggctgcttccacatgacttgctggtgtggccatgagttctgctactcctgtggcgcc 1745 ||||||||| ||||||||||||| | || || |||||||| |||||||| ||||| || Sbjct: 1275 caaggctgcaaccacatgacttgccgatgcgggcatgagttttgctactcgtgtggagca 1334 Query: 1746 gagtaca 1752 ||||||| Sbjct: 1335 gagtaca 1341
>ref|NM_118087.2| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding (AT4G19670) mRNA, complete cds Length = 1851 Score = 54.0 bits (27), Expect = 0.002 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1686 caaggctgcttccacatgacttgctggtgtggccatgagttctgctactcctgtggcgcc 1745 ||||||||| ||||||||||||| | || || |||||||| |||||||| ||||| || Sbjct: 1275 caaggctgcaaccacatgacttgccgatgcgggcatgagttttgctactcgtgtggagca 1334 Query: 1746 gagtaca 1752 ||||||| Sbjct: 1335 gagtaca 1341
>emb|CT985878.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 958 Score = 46.1 bits (23), Expect = 0.57 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1671 atgatcgaactaacgcaaggctgcttccacatgacttgctggtgtggccatgagttctgc 1730 ||||||||||| | ||||||| | ||||||||||||| | |||||| ||||||| ||| Sbjct: 552 atgatcgaactttctgaaggctgttaccacatgacttgcagatgtggctatgagttttgc 611 Query: 1731 tac 1733 ||| Sbjct: 612 tac 614
>emb|AL033383.26|HS1013A10 Human DNA sequence from clone RP5-1013A10 on chromosome 6p24.1-25.3 Contains the 3' end of the gene for serine/threonine-protein kinase PRP4 homolog (PRP4),(PR4H, PRP4H, KIAA0536), the gene for a novel protein similar to M. musculus RIKEN cDNA 1700026J04 gene (1700026J04Rik), the gene for a Mus musculus and Macaca fascicularis hypothetical protein and the PECI gene for peroxisomal D3,D2-enoyl-CoA isomerase. Contains two CpG islands, complete sequence Length = 112424 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2242 ggcacaggaaaaacaaaatgataccag 2268 ||||||||||||| ||||||||||||| Sbjct: 42210 ggcacaggaaaaaaaaaatgataccag 42236
>gb|AC012346.9|AC012346 Homo sapiens chromosome , clone RP11-15N22, complete sequence Length = 164470 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2263 taccagtacctctgtttgtttgtttgt 2289 |||||||| |||||||||||||||||| Sbjct: 21194 taccagtaactctgtttgtttgtttgt 21168
>gb|AC025519.10|AC025519 Homo sapiens, clone RP11-484J3, complete sequence Length = 171464 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2263 taccagtacctctgtttgtttgtttgt 2289 |||||||| |||||||||||||||||| Sbjct: 5282 taccagtaactctgtttgtttgtttgt 5308
>emb|CT835558.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI237A16, full insert sequence Length = 1947 Score = 44.1 bits (22), Expect = 2.2 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1692 tgcttccacatgacttgctggtgtggccatgagttctgctactcctgtgg 1741 |||| ||| ||||||||| ||| ||| |||||||||||||| ||||||| Sbjct: 1421 tgctaccatatgacttgcgtgtgcggctatgagttctgctacacctgtgg 1470
>ref|NM_001072055.1| Oryza sativa (japonica cultivar-group) Os11g0103400 (Os11g0103400) mRNA, complete cds Length = 1656 Score = 44.1 bits (22), Expect = 2.2 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1692 tgcttccacatgacttgctggtgtggccatgagttctgctactcctgtgg 1741 |||| ||| ||||||||| ||| ||| |||||||||||||| ||||||| Sbjct: 1360 tgctaccatatgacttgcgtgtgcggctatgagttctgctacacctgtgg 1409
>gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, complete sequence Length = 214060 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2268 gtacctctgtttgtttgtttgt 2289 |||||||||||||||||||||| Sbjct: 96760 gtacctctgtttgtttgtttgt 96781
>gb|AC138108.3| Mus musculus BAC clone RP24-497M9 from chromosome 10, complete sequence Length = 135541 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2268 gtacctctgtttgtttgtttgt 2289 |||||||||||||||||||||| Sbjct: 22964 gtacctctgtttgtttgtttgt 22943
>emb|BX004763.9| Zebrafish DNA sequence from clone CH211-131K2, complete sequence Length = 86545 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2273 tctgtttgtttgtttgtatctt 2294 |||||||||||||||||||||| Sbjct: 12008 tctgtttgtttgtttgtatctt 12029
>ref|XM_673100.1| Plasmodium berghei strain ANKA hypothetical protein (PB001086.02.0) partial mRNA Length = 2646 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2250 aaaaacaaaatgataccagtac 2271 |||||||||||||||||||||| Sbjct: 1894 aaaaacaaaatgataccagtac 1915
>ref|XM_724633.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00187) partial mRNA Length = 2835 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2250 aaaaacaaaatgataccagtac 2271 |||||||||||||||||||||| Sbjct: 2098 aaaaacaaaatgataccagtac 2119
>gb|AC145910.2| Gallus gallus BAC clone CH261-44O1 from chromosome unknown, complete sequence Length = 213878 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2273 tctgtttgtttgtttgtatctt 2294 |||||||||||||||||||||| Sbjct: 10781 tctgtttgtttgtttgtatctt 10760
>ref|XM_737644.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000704.03.0) partial mRNA Length = 1485 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2250 aaaaacaaaatgataccagtac 2271 |||||||||||||||||||||| Sbjct: 733 aaaaacaaaatgataccagtac 754
>gb|AC190218.2| Pan troglodytes BAC clone CH251-388P14 from chromosome 7, complete sequence Length = 181014 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 13 attattagggttcttgctttaactg 37 ||||||||||||||| ||||||||| Sbjct: 135685 attattagggttctttctttaactg 135661
>ref|XM_001081538.1| PREDICTED: Rattus norvegicus proline-rich protein (LOC685766), mRNA Length = 12939 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2112 atgatgaagagtttaaaactt 2132 ||||||||||||||||||||| Sbjct: 1622 atgatgaagagtttaaaactt 1642
>gb|AC171497.4| Pan troglodytes chromosome X clone PTB-121G7 map human ortholog p11.4, complete sequence Length = 227507 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2107 agtgaatgatgaagagtttaa 2127 ||||||||||||||||||||| Sbjct: 107751 agtgaatgatgaagagtttaa 107771
>ref|XM_979207.1| PREDICTED: Mus musculus SH3 domain protein D19, transcript variant 3 (Sh3d19), mRNA Length = 6822 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 846 gtggatgagctggtggctgag 866 ||||||||||||||||||||| Sbjct: 5547 gtggatgagctggtggctgag 5527
>ref|XM_979129.1| PREDICTED: Mus musculus SH3 domain protein D19, transcript variant 1 (Sh3d19), mRNA Length = 5241 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 846 gtggatgagctggtggctgag 866 ||||||||||||||||||||| Sbjct: 3966 gtggatgagctggtggctgag 3946
>ref|XM_979171.1| PREDICTED: Mus musculus SH3 domain protein D19, transcript variant 2 (Sh3d19), mRNA Length = 6410 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 846 gtggatgagctggtggctgag 866 ||||||||||||||||||||| Sbjct: 5135 gtggatgagctggtggctgag 5115
>ref|XM_979247.1| PREDICTED: Mus musculus SH3 domain protein D19, transcript variant 4 (Sh3d19), mRNA Length = 6410 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 846 gtggatgagctggtggctgag 866 ||||||||||||||||||||| Sbjct: 5135 gtggatgagctggtggctgag 5115
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1741 gcgccgagtacaacaacggcg 1761 ||||||||||||||||||||| Sbjct: 2233802 gcgccgagtacaacaacggcg 2233782
>gb|AC137843.15| Mus musculus chromosome 9, clone RP23-413J12, complete sequence Length = 197907 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1038 gaggactttgatctgatactg 1058 ||||||||||||||||||||| Sbjct: 187865 gaggactttgatctgatactg 187885
>gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, complete sequence Length = 163721 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2275 tgtttgtttgtttgtatcttc 2295 ||||||||||||||||||||| Sbjct: 38920 tgtttgtttgtttgtatcttc 38940
>gb|M86526.1|RATPRPPA Rat proline-rich protein (PRP) gene, 5' end, and containing several Alu-like repetitive elements Length = 13352 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2112 atgatgaagagtttaaaactt 2132 ||||||||||||||||||||| Sbjct: 6752 atgatgaagagtttaaaactt 6772
>gb|BT016231.1| Zea mays clone Contig64 mRNA sequence Length = 1447 Score = 42.1 bits (21), Expect = 8.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1689 ggctgcttccacatgacttgctggtgtggccatgagttctgctactcctgtgg 1741 ||||||| |||||||| ||| ||| ||| |||||||||||||| ||||||| Sbjct: 1171 ggctgctaccacatgatctgcgtgtgcggctatgagttctgctacacctgtgg 1223
>gb|AC091807.4| Homo sapiens chromosome X clone RP6-186E3 map p11.4, complete sequence Length = 172150 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2107 agtgaatgatgaagagtttaa 2127 ||||||||||||||||||||| Sbjct: 64619 agtgaatgatgaagagtttaa 64639
>gb|AC005997.3| Homo sapiens PAC clone RP4-558L10 from 7, complete sequence Length = 143250 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 attattagggttcttgctttaactg 37 ||||||||||||||| ||||||||| Sbjct: 136027 attattagggttctttctttaactg 136051
>gb|AC117251.3| Mus musculus BAC clone RP24-372C12 from chromosome 8, complete sequence Length = 191927 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2273 tctgtttgtttgtttgtatct 2293 ||||||||||||||||||||| Sbjct: 23562 tctgtttgtttgtttgtatct 23542
>ref|XM_547830.2| PREDICTED: Canis familiaris similar to orthodenticle 2 isoform b, transcript variant 1 (LOC490708), mRNA Length = 2090 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2264 accagtacctctgtttgtttgtttg 2288 ||||| ||||||||||||||||||| Sbjct: 48 accagcacctctgtttgtttgtttg 72
>ref|XM_846802.1| PREDICTED: Canis familiaris similar to orthodenticle 2 isoform b, transcript variant 2 (LOC490708), mRNA Length = 2095 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2264 accagtacctctgtttgtttgtttg 2288 ||||| ||||||||||||||||||| Sbjct: 29 accagcacctctgtttgtttgtttg 53
>gb|AC100511.12| Mus musculus chromosome 3, clone RP23-144N19, complete sequence Length = 200790 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 490 ctggtttttaagggagggcca 510 ||||||||||||||||||||| Sbjct: 85175 ctggtttttaagggagggcca 85155
>gb|AC102432.9| Mus musculus chromosome 19, clone RP24-114A21, complete sequence Length = 199240 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2275 tgtttgtttgtttgtatcttc 2295 ||||||||||||||||||||| Sbjct: 74709 tgtttgtttgtttgtatcttc 74689
>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence Length = 215356 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2275 tgtttgtttgtttgtatcttc 2295 ||||||||||||||||||||| Sbjct: 56355 tgtttgtttgtttgtatcttc 56375
>gb|AC105008.5| Homo sapiens chromosome 8, clone CTD-2589E21, complete sequence Length = 172661 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 940 cagagaagctatacttccaga 960 ||||||||||||||||||||| Sbjct: 7711 cagagaagctatacttccaga 7731
>gb|AC104016.8| Homo sapiens chromosome 11, clone RP11-343J8, complete sequence Length = 178534 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1208 attttgctacagttgcttgattgtg 1232 ||||||||||| ||||||||||||| Sbjct: 165823 attttgctacaattgcttgattgtg 165799
>gb|AE012152.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 60 of 460 of the complete genome Length = 10029 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2082 gacacctacaacgacgactacatcc 2106 |||| |||||||||||||||||||| Sbjct: 8039 gacatctacaacgacgactacatcc 8063
>gb|AC104371.4| Homo sapiens chromosome 8, clone RP11-383N10, complete sequence Length = 170106 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 940 cagagaagctatacttccaga 960 ||||||||||||||||||||| Sbjct: 100617 cagagaagctatacttccaga 100637
>gb|AC069362.12| Homo sapiens, clone RP11-745J24, complete sequence Length = 176295 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2107 agtgaatgatgaagagtttaa 2127 ||||||||||||||||||||| Sbjct: 100096 agtgaatgatgaagagtttaa 100076
>emb|AL365220.24| Human DNA sequence from clone RP4-735N21 on chromosome 1p21.2-22.2 Contains a novel pseudogene, complete sequence Length = 113028 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 caaaaaatggccttctgactg 492 ||||||||||||||||||||| Sbjct: 20466 caaaaaatggccttctgactg 20446
>dbj|AK220209.1| Mus musculus mRNA for mFLJ00338 protein Length = 1655 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 646 aggaggagtgggaggacacgg 666 ||||||||||||||||||||| Sbjct: 1311 aggaggagtgggaggacacgg 1291
>emb|AL023576.1|HS358H9 Human DNA sequence from clone CTA-358H9 on chromosome 22q13.2-13.33 Contains an STS and GSSs, complete sequence Length = 12931 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1683 acgcaaggctgcttccacatg 1703 ||||||||||||||||||||| Sbjct: 5760 acgcaaggctgcttccacatg 5780
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2082 gacacctacaacgacgactacatcc 2106 |||| |||||||||||||||||||| Sbjct: 4374141 gacatctacaacgacgactacatcc 4374117
>emb|AJ313282.1|UBA313282 Uncultured bacterium partial nifH gene for nitrogenase Fe protein, clone root50 Length = 336 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2164 aatggcgcatataccgatgat 2184 ||||||||||||||||||||| Sbjct: 208 aatggcgcatataccgatgat 228
>gb|AC100865.5| Homo sapiens chromosome 11, clone RP11-449L13, complete sequence Length = 202683 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1208 attttgctacagttgcttgattgtg 1232 ||||||||||| ||||||||||||| Sbjct: 130821 attttgctacaattgcttgattgtg 130797
>dbj|AB113204.1| Aotus trivirgatus Aotr-B1 gene for MHC class I antigen, complete cds Length = 2867 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 789 atggagaggacacctggggtg 809 ||||||||||||||||||||| Sbjct: 1468 atggagaggacacctggggtg 1448
>emb|BX324233.5| Zebrafish DNA sequence from clone CH211-230L11 in linkage group 22, complete sequence Length = 157470 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2275 tgtttgtttgtttgtatcttc 2295 ||||||||||||||||||||| Sbjct: 22859 tgtttgtttgtttgtatcttc 22839
>ref|XM_552411.1| Anopheles gambiae str. PEST ENSANGP00000025597 (ENSANGG00000017555), partial mRNA Length = 13719 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 768 ctgtccgggatcggcgtggtg 788 ||||||||||||||||||||| Sbjct: 11557 ctgtccgggatcggcgtggtg 11577
>ref|XM_320691.2| Anopheles gambiae str. PEST ENSANGP00000020044 (ENSANGG00000017555), partial mRNA Length = 14568 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 768 ctgtccgggatcggcgtggtg 788 ||||||||||||||||||||| Sbjct: 12394 ctgtccgggatcggcgtggtg 12414
>gb|AC154478.2| Mus musculus BAC clone RP24-135B17 from 16, complete sequence Length = 178478 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2269 tacctctgtttgtttgtttgt 2289 ||||||||||||||||||||| Sbjct: 61923 tacctctgtttgtttgtttgt 61903
>dbj|AP003050.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-410I24, complete sequence Length = 152715 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1237 ttgaagacaggctgcatgcct 1257 ||||||||||||||||||||| Sbjct: 23326 ttgaagacaggctgcatgcct 23346
>gb|AY429102.1| Homo sapiens phosphatidylinositol transfer protein membrane-associated 1 (PITPNM1) mRNA, complete cds Length = 3732 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 tccttcaccgccggcgtctcc 692 ||||||||||||||||||||| Sbjct: 3085 tccttcaccgccggcgtctcc 3105
>gb|AC160019.2| Gallus gallus BAC clone CH261-50H15 from chromosome unknown, complete sequence Length = 228494 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2275 tgtttgtttgtttgtatcttc 2295 ||||||||||||||||||||| Sbjct: 135788 tgtttgtttgtttgtatcttc 135768
>gb|AC157951.2| Gallus gallus BAC clone CH261-173J5 from chromosome unknown, complete sequence Length = 206432 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2275 tgtttgtttgtttgtatcttc 2295 ||||||||||||||||||||| Sbjct: 201538 tgtttgtttgtttgtatcttc 201558 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 369,124,178 Number of extensions: 21272904 Number of successful extensions: 483380 Number of sequences better than 10.0: 63 Number of HSP's gapped: 483362 Number of HSP's successfully gapped: 99 Length of query: 2310 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2287 Effective length of database: 18,503,978,556 Effective search space: 42318598957572 Effective search space used: 42318598957572 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
