Clone Information

BLAST Search Result

Clone Name	FLbaf166p17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Q8W207:CSN2_ARATH COP9 signalosome complex subunit 2 - Arabidops...	475	0.0
2	Q6IR75:CSN2_XENLA COP9 signalosome complex subunit 2 - Xenopus l...	405	e-164
3	P61203:CSN2_RAT COP9 signalosome complex subunit 2 - Rattus norv...	405	e-163
4	P61202:CSN2_MOUSE COP9 signalosome complex subunit 2 - Mus muscu...	405	e-163
5	P61201:CSN2_HUMAN COP9 signalosome complex subunit 2 - Homo sapi...	405	e-163
6	Q6IQT4:CSN2_DANRE COP9 signalosome complex subunit 2 - Danio rer...	404	e-162
7	Q94899:CSN2_DROME COP9 signalosome complex subunit 2 - Drosophil...	370	e-150
8	O01422:CSN2_CAEEL COP9 signalosome complex subunit 2 - Caenorhab...	316	e-130
9	Q9HFR0:CSN2_SCHPO COP9 signalosome complex subunit 2 - Schizosac...	288	e-108
10	O00231:PSD11_HUMAN 26S proteasome non-ATPase regulatory subunit ...	102	5e-21
11	Q2KI42:PSD11_BOVIN 26S proteasome non-ATPase regulatory subunit ...	102	5e-21
12	Q8BG32:PSD11_MOUSE 26S proteasome non-ATPase regulatory subunit ...	101	9e-21
13	P34481:YMJ5_CAEEL Uncharacterized protein F59B2.5 - Caenorhabdit...	87	2e-16
14	Q9P7S2:RPN6_SCHPO Probable 26S proteasome regulatory subunit rpn...	87	2e-16
15	Q12377:RPN6_YEAST 26S proteasome regulatory subunit RPN6 - Sacch...	75	7e-13
16	Q9GS00:CSN1_CAEEL COP9 signalosome complex subunit 1 - Caenorhab...	48	1e-04
17	Q9VVU5:CSN1_DROME COP9 signalosome complex subunit 1b - Drosophi...	48	1e-04
18	Q9LQR8:PSD32_ARATH Probable 26S proteasome non-ATPase regulatory...	46	4e-04
19	Q9V345:CSN4_DROME COP9 signalosome complex subunit 4 - Drosophil...	45	7e-04
20	P45432:CSN1_ARATH COP9 signalosome complex subunit 1 - Arabidops...	45	0.001
21	Q9LNU4:PSD31_ARATH Probable 26S proteasome non-ATPase regulatory...	44	0.003
22	P93768:PSMD3_TOBAC Probable 26S proteasome non-ATPase regulatory...	42	0.008
23	Q06364:PSMD3_DAUCA Probable 26S proteasome non-ATPase regulatory...	38	0.12
24	Q20585:PSMD6_CAEEL 26S proteasome non-ATPase regulatory subunit ...	38	0.15
25	Q99LD4:CSN1_MOUSE COP9 signalosome complex subunit 1 - Mus muscu...	37	0.26
26	Q6NRT5:CSN1_XENLA COP9 signalosome complex subunit 1 - Xenopus l...	37	0.34
27	Q13098:CSN1_HUMAN COP9 signalosome complex subunit 1 - Homo sapi...	37	0.34
28	Q6H236:PEG3_BOVIN Paternally expressed gene 3 protein - Bos taur...	36	0.44
29	Q8L5U0:CSN4_ARATH COP9 signalosome complex subunit 4 - Arabidops...	35	1.3
30	Q2KJC1:CDC5L_BOVIN Cell division cycle 5-like protein - Bos taur...	34	1.7
31	Q21219:OPT2_CAEEL Oligopeptide transporter 2 - Caenorhabditis el...	34	2.2
32	Q10335:RPN7_SCHPO Probable 26S proteasome regulatory subunit rpn...	34	2.2
33	O08837:CDC5L_RAT Cell division cycle 5-related protein - Rattus ...	33	3.8
34	Q6A068:CDC5L_MOUSE Cell division cycle 5-related protein - Mus m...	33	4.9
35	Q99459:CDC5L_HUMAN Cell division cycle 5-like protein - Homo sap...	33	4.9
36	Q48QX0:RUVX_STRPM Putative Holliday junction resolvase - Strepto...	32	6.4
37	Q1J498:RUVX_STRPF Putative Holliday junction resolvase - Strepto...	32	6.4
38	Q1JEI0:RUVX_STRPD Putative Holliday junction resolvase - Strepto...	32	6.4
39	Q1JJH9:RUVX_STRPC Putative Holliday junction resolvase - Strepto...	32	6.4
40	Q1J9D0:RUVX_STRPB Putative Holliday junction resolvase - Strepto...	32	6.4
41	P67495:RUVX_STRP8 Putative Holliday junction resolvase - Strepto...	32	6.4
42	Q5X9I3:RUVX_STRP6 Putative Holliday junction resolvase - Strepto...	32	6.4
43	P67494:RUVX_STRP3 Putative Holliday junction resolvase - Strepto...	32	6.4
44	Q99XP4:RUVX_STRP1 Putative Holliday junction resolvase - Strepto...	32	6.4
45	O73700:CAC1D_CHICK Voltage-dependent L-type calcium channel subu...	32	6.4
46	Q99958:FOXC2_HUMAN Forkhead box protein C2 - Homo sapiens (Human)	32	6.4
47	O67310:Y1273_AQUAE UPF0169 lipoprotein aq_1273 precursor - Aquif...	32	8.3
48	P36444:MAOC_FLAPR NADP-dependent malic enzyme, chloroplast precu...	32	8.3
49	O49160:IF38_ARATH Eukaryotic translation initiation factor 3 sub...	32	8.4

>Q8W207:CSN2_ARATH COP9 signalosome complex subunit 2 - Arabidopsis thaliana (Mouse-ear|
            cress)
          Length = 439
 Score =  475 bits (1223), Expect(2) = 0.0
 Identities = 229/282 (81%), Positives = 262/282 (92%)
 Frame = +1

Query: 613  DMGEYGRMSKILKELHKSCQKEDGSDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQR 792
            D+GEY RM+KILKELHKSCQKEDG+DDQKKG+QLLEVYAIEIQ+YTETK+NKKLK+LY +
Sbjct: 157  DIGEYRRMTKILKELHKSCQKEDGTDDQKKGSQLLEVYAIEIQIYTETKDNKKLKQLYHK 216

Query: 793  ALSIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYL 972
            AL+IKSAIPHPRIMGIIRECGGKMHMAERQW +AATDFFEAFKNYDEAGN RRIQCLKYL
Sbjct: 217  ALAIKSAIPHPRIMGIIRECGGKMHMAERQWEEAATDFFEAFKNYDEAGNQRRIQCLKYL 276

Query: 973  VLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDD 1152
            VLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQ+N+I+EFE+ILKSNRRTIMDD
Sbjct: 277  VLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFERILKSNRRTIMDD 336

Query: 1153 PFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQG 1332
            PFIRNY+EDLLK +RTQVLLKLIKPYT+I IPFIS+ELNVPE DV +LLVSLILD+R+ G
Sbjct: 337  PFIRNYMEDLLKKVRTQVLLKLIKPYTKIGIPFISKELNVPETDVTELLVSLILDSRIDG 396

Query: 1333 HIDQVNKLLECGDRSKGMRKYQAIDKWNTQLKSIYQTVSNRV 1458
            HID++N+ L  GD   G + ++A+DKWN+QLKS+   +++RV
Sbjct: 397  HIDEMNRYLLRGDSGNGRKLHKAVDKWNSQLKSLSSNITSRV 438



 Score =  286 bits (731), Expect(2) = 0.0
 Identities = 138/159 (86%), Positives = 147/159 (92%)
 Frame = +2

Query: 146 MGSDADMEDYGFEYSDDEPEEQDVDIENQYYNSKGMVETDPEGALAGFDAVVRMEPEKAE 325
           M SDADMEDYGFEYSD+E EEQDVDIENQYYNSKGMVET+PE AL+GF  VV+MEPEKA+
Sbjct: 1   MASDADMEDYGFEYSDEEQEEQDVDIENQYYNSKGMVETEPEEALSGFAEVVQMEPEKAD 60

Query: 326 WGFKALKQTVKLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQH 505
           WGFKALKQTVK+YY+LGKYKEMM+AY EMLTYIKSAVTRNYSEKCINNIMDFVSGSASQ+
Sbjct: 61  WGFKALKQTVKIYYRLGKYKEMMEAYTEMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN 120

Query: 506 FNLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIWLTWG 622
             LLQEFYQTTLKALEEAKNERLWFKTNLKLC IW   G
Sbjct: 121 TGLLQEFYQTTLKALEEAKNERLWFKTNLKLCNIWFDIG 159

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>Q6IR75:CSN2_XENLA COP9 signalosome complex subunit 2 - Xenopus laevis (African clawed|
            frog)
          Length = 441

 Score =  405 bits (1042), Expect(2) = e-164
 Identities = 194/279 (69%), Positives = 232/279 (83%)
 Frame = +1

Query: 622  EYGRMSKILKELHKSCQKEDGSDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALS 801
            EYG++ KIL++LH+SCQ +DG DD KKGTQLLE+YA+EIQMYT  KNNKKLK LY+++L 
Sbjct: 162  EYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLH 221

Query: 802  IKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLA 981
            IKSAIPHP IMG+IRECGGKMH+ E ++  A TDFFEAFKNYDE+G+PRR  CLKYLVLA
Sbjct: 222  IKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLA 281

Query: 982  NMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFI 1161
            NMLM+S +NPFD QEAKPYKNDPEILAMTNL++AYQ NDI EFEKILK+N   IMDDPFI
Sbjct: 282  NMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFI 341

Query: 1162 RNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHID 1341
            R +IE+LL+NIRTQVL+KLIKPYTRI IPFIS+ELN+   DVE LLV  ILDN + G ID
Sbjct: 342  REHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRID 401

Query: 1342 QVNKLLECGDRSKGMRKYQAIDKWNTQLKSIYQTVSNRV 1458
            QVN+LLE   + +G  +Y A+DKW  QL S+ Q V +++
Sbjct: 402  QVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKL 440



 Score =  196 bits (497), Expect(2) = e-164
 Identities = 92/151 (60%), Positives = 120/151 (79%)
 Frame = +2

Query: 161 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGMVETDPEGALAGFDAVVRMEPEKAEWGFKA 340
           D EDY  EYS+D   E +VD+ENQYYNSK + E DP+ AL+ F  V+ +E EK EWGFKA
Sbjct: 10  DEEDYDLEYSEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKA 69

Query: 341 LKQTVKLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQHFNLLQ 520
           LKQ +K+ +KLG Y EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++  S S+  +LLQ
Sbjct: 70  LKQMIKINFKLGNYPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQ 127

Query: 521 EFYQTTLKALEEAKNERLWFKTNLKLCKIWL 613
           EFY+TTL AL++AKN+RLWFKTN KL K++L
Sbjct: 128 EFYETTLDALKDAKNDRLWFKTNTKLGKLYL 158

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>P61203:CSN2_RAT COP9 signalosome complex subunit 2 - Rattus norvegicus (Rat)|
          Length = 443

 Score =  405 bits (1042), Expect(2) = e-163
 Identities = 194/279 (69%), Positives = 232/279 (83%)
 Frame = +1

Query: 622  EYGRMSKILKELHKSCQKEDGSDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALS 801
            EYG++ KIL++LH+SCQ +DG DD KKGTQLLE+YA+EIQMYT  KNNKKLK LY+++L 
Sbjct: 164  EYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLH 223

Query: 802  IKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLA 981
            IKSAIPHP IMG+IRECGGKMH+ E ++  A TDFFEAFKNYDE+G+PRR  CLKYLVLA
Sbjct: 224  IKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLA 283

Query: 982  NMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFI 1161
            NMLM+S +NPFD QEAKPYKNDPEILAMTNL++AYQ NDI EFEKILK+N   IMDDPFI
Sbjct: 284  NMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFI 343

Query: 1162 RNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHID 1341
            R +IE+LL+NIRTQVL+KLIKPYTRI IPFIS+ELN+   DVE LLV  ILDN + G ID
Sbjct: 344  REHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRID 403

Query: 1342 QVNKLLECGDRSKGMRKYQAIDKWNTQLKSIYQTVSNRV 1458
            QVN+LLE   + +G  +Y A+DKW  QL S+ Q V +++
Sbjct: 404  QVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKL 442



 Score =  192 bits (487), Expect(2) = e-163
 Identities = 90/151 (59%), Positives = 120/151 (79%)
 Frame = +2

Query: 161 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGMVETDPEGALAGFDAVVRMEPEKAEWGFKA 340
           D EDY  EYS+D   E +VD+ENQYYNSK + E DP+ AL+ F  V+ +E EK EWGFKA
Sbjct: 12  DEEDYDLEYSEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKA 71

Query: 341 LKQTVKLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQHFNLLQ 520
           LKQ +K+ +KL  + EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++  S S+  +LLQ
Sbjct: 72  LKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQ 129

Query: 521 EFYQTTLKALEEAKNERLWFKTNLKLCKIWL 613
           EFY+TTL+AL++AKN+RLWFKTN KL K++L
Sbjct: 130 EFYETTLEALKDAKNDRLWFKTNTKLGKLYL 160

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>P61202:CSN2_MOUSE COP9 signalosome complex subunit 2 - Mus musculus (Mouse)|
          Length = 443

 Score =  405 bits (1042), Expect(2) = e-163
 Identities = 194/279 (69%), Positives = 232/279 (83%)
 Frame = +1

Query: 622  EYGRMSKILKELHKSCQKEDGSDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALS 801
            EYG++ KIL++LH+SCQ +DG DD KKGTQLLE+YA+EIQMYT  KNNKKLK LY+++L 
Sbjct: 164  EYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLH 223

Query: 802  IKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLA 981
            IKSAIPHP IMG+IRECGGKMH+ E ++  A TDFFEAFKNYDE+G+PRR  CLKYLVLA
Sbjct: 224  IKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLA 283

Query: 982  NMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFI 1161
            NMLM+S +NPFD QEAKPYKNDPEILAMTNL++AYQ NDI EFEKILK+N   IMDDPFI
Sbjct: 284  NMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFI 343

Query: 1162 RNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHID 1341
            R +IE+LL+NIRTQVL+KLIKPYTRI IPFIS+ELN+   DVE LLV  ILDN + G ID
Sbjct: 344  REHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRID 403

Query: 1342 QVNKLLECGDRSKGMRKYQAIDKWNTQLKSIYQTVSNRV 1458
            QVN+LLE   + +G  +Y A+DKW  QL S+ Q V +++
Sbjct: 404  QVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKL 442



 Score =  192 bits (487), Expect(2) = e-163
 Identities = 90/151 (59%), Positives = 120/151 (79%)
 Frame = +2

Query: 161 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGMVETDPEGALAGFDAVVRMEPEKAEWGFKA 340
           D EDY  EYS+D   E +VD+ENQYYNSK + E DP+ AL+ F  V+ +E EK EWGFKA
Sbjct: 12  DEEDYDLEYSEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKA 71

Query: 341 LKQTVKLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQHFNLLQ 520
           LKQ +K+ +KL  + EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++  S S+  +LLQ
Sbjct: 72  LKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQ 129

Query: 521 EFYQTTLKALEEAKNERLWFKTNLKLCKIWL 613
           EFY+TTL+AL++AKN+RLWFKTN KL K++L
Sbjct: 130 EFYETTLEALKDAKNDRLWFKTNTKLGKLYL 160

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>P61201:CSN2_HUMAN COP9 signalosome complex subunit 2 - Homo sapiens (Human)|
          Length = 443

 Score =  405 bits (1042), Expect(2) = e-163
 Identities = 194/279 (69%), Positives = 232/279 (83%)
 Frame = +1

Query: 622  EYGRMSKILKELHKSCQKEDGSDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALS 801
            EYG++ KIL++LH+SCQ +DG DD KKGTQLLE+YA+EIQMYT  KNNKKLK LY+++L 
Sbjct: 164  EYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLH 223

Query: 802  IKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLA 981
            IKSAIPHP IMG+IRECGGKMH+ E ++  A TDFFEAFKNYDE+G+PRR  CLKYLVLA
Sbjct: 224  IKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLA 283

Query: 982  NMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFI 1161
            NMLM+S +NPFD QEAKPYKNDPEILAMTNL++AYQ NDI EFEKILK+N   IMDDPFI
Sbjct: 284  NMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFI 343

Query: 1162 RNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHID 1341
            R +IE+LL+NIRTQVL+KLIKPYTRI IPFIS+ELN+   DVE LLV  ILDN + G ID
Sbjct: 344  REHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRID 403

Query: 1342 QVNKLLECGDRSKGMRKYQAIDKWNTQLKSIYQTVSNRV 1458
            QVN+LLE   + +G  +Y A+DKW  QL S+ Q V +++
Sbjct: 404  QVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKL 442



 Score =  192 bits (487), Expect(2) = e-163
 Identities = 90/151 (59%), Positives = 120/151 (79%)
 Frame = +2

Query: 161 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGMVETDPEGALAGFDAVVRMEPEKAEWGFKA 340
           D EDY  EYS+D   E +VD+ENQYYNSK + E DP+ AL+ F  V+ +E EK EWGFKA
Sbjct: 12  DEEDYDLEYSEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKA 71

Query: 341 LKQTVKLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQHFNLLQ 520
           LKQ +K+ +KL  + EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++  S S+  +LLQ
Sbjct: 72  LKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQ 129

Query: 521 EFYQTTLKALEEAKNERLWFKTNLKLCKIWL 613
           EFY+TTL+AL++AKN+RLWFKTN KL K++L
Sbjct: 130 EFYETTLEALKDAKNDRLWFKTNTKLGKLYL 160

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>Q6IQT4:CSN2_DANRE COP9 signalosome complex subunit 2 - Danio rerio (Zebrafish)|
            (Brachydanio rerio)
          Length = 443

 Score =  404 bits (1037), Expect(2) = e-162
 Identities = 192/279 (68%), Positives = 232/279 (83%)
 Frame = +1

Query: 622  EYGRMSKILKELHKSCQKEDGSDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALS 801
            E+G++ KIL++LH+SCQ +DG DD KKGTQLLE+YA+EIQMYT  KNNKKLK LY+++L 
Sbjct: 164  EFGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLH 223

Query: 802  IKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLA 981
            IKSAIPHP IMG+IRECGGKMH+ E ++  A TDFFEAFKNYDE+G+PRR  CLKYLVLA
Sbjct: 224  IKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLA 283

Query: 982  NMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFI 1161
            NMLM+S +NPFD QEAKPYKNDPEILAMTNL++AYQ NDI EFEKILK+N   IMDDPFI
Sbjct: 284  NMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFI 343

Query: 1162 RNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHID 1341
            R +IE+LL+NIRTQVL+KLIKPYTRI IPFIS+ELN+   DVE LLV  ILDN + G ID
Sbjct: 344  REHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTINGRID 403

Query: 1342 QVNKLLECGDRSKGMRKYQAIDKWNTQLKSIYQTVSNRV 1458
            QVN+LLE   + +G  +Y A+DKW  QL S+ Q + +++
Sbjct: 404  QVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAIVSKL 442



 Score =  192 bits (487), Expect(2) = e-162
 Identities = 90/151 (59%), Positives = 120/151 (79%)
 Frame = +2

Query: 161 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGMVETDPEGALAGFDAVVRMEPEKAEWGFKA 340
           D EDY  EYS+D   E +VD+ENQYYNSK + E DP+ AL+ F  V+ +E EK EWGFKA
Sbjct: 12  DEEDYDLEYSEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKA 71

Query: 341 LKQTVKLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQHFNLLQ 520
           LKQ +K+ +KL  + EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++  S S+  +LLQ
Sbjct: 72  LKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQ 129

Query: 521 EFYQTTLKALEEAKNERLWFKTNLKLCKIWL 613
           EFY+TTL+AL++AKN+RLWFKTN KL K++L
Sbjct: 130 EFYETTLEALKDAKNDRLWFKTNTKLGKLYL 160

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>Q94899:CSN2_DROME COP9 signalosome complex subunit 2 - Drosophila melanogaster (Fruit|
            fly)
          Length = 444

 Score =  370 bits (951), Expect(2) = e-150
 Identities = 177/282 (62%), Positives = 224/282 (79%)
 Frame = +1

Query: 613  DMGEYGRMSKILKELHKSCQKEDGSDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQR 792
            D  ++ ++ KILK+LH+SCQ +DG DD KKGTQLLE+YA+EIQMYT  KNNKKLK LY++
Sbjct: 162  DRSDFTKLQKILKQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTVQKNNKKLKALYEQ 221

Query: 793  ALSIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYL 972
            +L IKSAIPHP IMG+IRECGGKMH+ E ++  A TDFFEAFKNYDE+G+PRR  CLKYL
Sbjct: 222  SLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYL 281

Query: 973  VLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDD 1152
            VLANMLM+S +NPFD QEAKPYKNDPEILAMTNL+ +YQ NDI EFE IL+ +R  IM D
Sbjct: 282  VLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINEFETILRQHRSNIMAD 341

Query: 1153 PFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQG 1332
             FIR +IEDLL+NIRTQVL+KLI+PY  I IPFI+  LN+   +VE LLVS ILD+ ++G
Sbjct: 342  QFIREHIEDLLRNIRTQVLIKLIRPYKNIAIPFIANALNIEPAEVESLLVSCILDDTIKG 401

Query: 1333 HIDQVNKLLECGDRSKGMRKYQAIDKWNTQLKSIYQTVSNRV 1458
             IDQVN++L+    +    +Y A++KW+ Q++S+   V  ++
Sbjct: 402  RIDQVNQVLQLDKINSSASRYNALEKWSNQIQSLQFAVVQKM 443



 Score =  182 bits (463), Expect(2) = e-150
 Identities = 90/151 (59%), Positives = 116/151 (76%), Gaps = 1/151 (0%)
 Frame = +2

Query: 161 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGMVETDPEGALAGFDAVVRMEP-EKAEWGFK 337
           D EDYG EYS+D   E DVD+ENQYYNSK + E +P+ ALA F  V+ +E  EK EWGFK
Sbjct: 12  DDEDYGLEYSEDSNSEPDVDLENQYYNSKALKEEEPKAALASFQKVLDLENGEKGEWGFK 71

Query: 338 ALKQTVKLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQHFNLL 517
           ALKQ +K+ ++L  Y EMM  Y+++LTYIKSAVTRN+SEK IN+I+D++  S S++  LL
Sbjct: 72  ALKQMIKINFRLCNYDEMMVRYKQLLTYIKSAVTRNHSEKSINSILDYI--STSKNMALL 129

Query: 518 QEFYQTTLKALEEAKNERLWFKTNLKLCKIW 610
           Q FY+TTL AL +AKN+RLWFKTN KL K++
Sbjct: 130 QNFYETTLDALRDAKNDRLWFKTNTKLGKLY 160

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>O01422:CSN2_CAEEL COP9 signalosome complex subunit 2 - Caenorhabditis elegans|
          Length = 495

 Score =  316 bits (809), Expect(2) = e-130
 Identities = 150/261 (57%), Positives = 206/261 (78%), Gaps = 3/261 (1%)
 Frame = +1

Query: 613  DMGEYGRMSKILKELHKSCQKEDGSDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQ- 789
            D+ E+ ++ KI+K+L  SC+ E G +DQ+KGTQLLE+YA+EIQMYTE KNNK LK +Y+ 
Sbjct: 158  DLHEFTKLEKIVKQLKVSCKNEQGEEDQRKGTQLLEIYALEIQMYTEQKNNKALKWVYEL 217

Query: 790  --RALSIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCL 963
              +A+  KSAIPHP I+G IRECGGKMH+ + ++ DA TDFFEAFKNYDE+G+PRR  CL
Sbjct: 218  ATQAIHTKSAIPHPLILGTIRECGGKMHLRDGRFLDAHTDFFEAFKNYDESGSPRRTTCL 277

Query: 964  KYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTI 1143
            KYLVLANML++S++NPFD QEAKP+KN+PEI+AMT ++ AYQ NDI  FE+I+ +++ +I
Sbjct: 278  KYLVLANMLIKSDINPFDSQEAKPFKNEPEIVAMTQMVQAYQDNDIQAFEQIMAAHQDSI 337

Query: 1144 MDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNR 1323
            M DPFIR + E+L+ NIRTQVLL+LI+PYT +RI ++SQ+L V +K+V  LLV  ILD+ 
Sbjct: 338  MADPFIREHTEELMNNIRTQVLLRLIRPYTNVRISYLSQKLKVSQKEVIHLLVDAILDDG 397

Query: 1324 VQGHIDQVNKLLECGDRSKGM 1386
            ++  I++ + ++E     K M
Sbjct: 398  LEAKINEESGMIEMPKNKKKM 418



 Score =  172 bits (437), Expect(2) = e-130
 Identities = 84/151 (55%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
 Frame = +2

Query: 161 DMEDYGFEYSDDEPEEQDVDIENQYYNSKGMVETDP-EGALAGFDAVVRMEPEKAEWGFK 337
           D EDYGFEY DD   E DVD+ENQYY +KG+      + A+  F+ V+ +E EK EWGFK
Sbjct: 8   DDEDYGFEYEDDSGSEPDVDMENQYYTAKGLRSDGKLDEAIKSFEKVLELEGEKGEWGFK 67

Query: 338 ALKQTVKLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQHFNLL 517
           ALKQ +K+ +   + ++M++ YR++LTYIKSAVT+NYSEK IN I+D++  S S+  +LL
Sbjct: 68  ALKQMIKITFGQNRLEKMLEYYRQLLTYIKSAVTKNYSEKSINAILDYI--STSRQMDLL 125

Query: 518 QEFYQTTLKALEEAKNERLWFKTNLKLCKIW 610
           Q FY+TTL AL++AKNERLWFKTN KL K++
Sbjct: 126 QHFYETTLDALKDAKNERLWFKTNTKLGKLF 156

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>Q9HFR0:CSN2_SCHPO COP9 signalosome complex subunit 2 - Schizosaccharomyces pombe|
            (Fission yeast)
          Length = 437

 Score =  288 bits (736), Expect(2) = e-108
 Identities = 140/278 (50%), Positives = 198/278 (71%), Gaps = 4/278 (1%)
 Frame = +1

Query: 607  LVDMGEYGRMSKILKELHKSCQKEDGS-DDQKKGTQLLEVYAIEIQMYTETKNNKKLKEL 783
            L+    Y +   +L+++H+    E+ S  DQ +GT LLE+Y++EIQMY++ ++NK+LKEL
Sbjct: 160  LLTQKNYHKFKYLLRQMHELLSDENNSVADQNRGTHLLELYSLEIQMYSDIEDNKRLKEL 219

Query: 784  YQRALSIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCL 963
            YQ +L +K+AIPHPRIMGIIRECGGKMHM E QW++A T+FFE+FK+YDEAG+  RI+ L
Sbjct: 220  YQSSLRVKTAIPHPRIMGIIRECGGKMHMQENQWSEAQTNFFESFKSYDEAGSSDRIRVL 279

Query: 964  KYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTI 1143
            KYLVLANML ESE+NPFD  E +PYK++P I+AMT L+ AYQ  DI   E+IL++ +  I
Sbjct: 280  KYLVLANMLSESEINPFDSPETQPYKDNPHIIAMTKLVEAYQIRDITAVERILQTYQHDI 339

Query: 1144 MDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNR 1323
            +DD FIR Y++ +L +IR+QVL++L+KPYT +++  ++++L V    +EQ LV LI+D R
Sbjct: 340  LDDDFIRQYVDKILYSIRSQVLIELVKPYTSVKLSLLAKKLGVSISIIEQALVGLIIDER 399

Query: 1324 VQGHIDQVNKLLECGDRSKGMRKYQAID---KWNTQLK 1428
            V G ID VN++         +      D    WNT  K
Sbjct: 400  VNGKIDMVNEVFTISQPKNTIHNQLVEDVQKLWNTATK 437



 Score =  125 bits (314), Expect(2) = e-108
 Identities = 67/156 (42%), Positives = 99/156 (63%), Gaps = 4/156 (2%)
 Frame = +2

Query: 161 DMEDYGFEYSDDEPE--EQDVDIENQYYNSKGMVETDPEGALAGFDAVV-RMEPEKAEWG 331
           D E+Y FE+ DD+ +  E  VD+EN YYNSK + E +PE AL  F ++V + E E+ EW 
Sbjct: 9   DDENYDFEFEDDDDDMIEPYVDVENCYYNSKSLKEENPESALTSFYSIVEKCEGEQNEWA 68

Query: 332 FKALKQTVKLYYKLGKYKEMMDAYREMLTYIK-SAVTRNYSEKCINNIMDFVSGSASQHF 508
           FKALKQ  K+ ++L KY +M+ +Y+ +L Y    ++T+NYSEK I NI+++ S   +  F
Sbjct: 69  FKALKQITKINFQLKKYDDMLQSYQRLLGYTNWLSITKNYSEKSIYNIVEYASSCENTEF 128

Query: 509 NLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIWLT 616
             L++FY  T KAL+   NERL  K  + + +  LT
Sbjct: 129 --LEKFYDVTTKALQNLNNERLMLKVLMHVARFLLT 162

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>O00231:PSD11_HUMAN 26S proteasome non-ATPase regulatory subunit 11 - Homo sapiens|
            (Human)
          Length = 422

 Score =  102 bits (254), Expect = 5e-21
 Identities = 74/278 (26%), Positives = 135/278 (48%), Gaps = 5/278 (1%)
 Frame = +1

Query: 637  SKILKELHKSCQKEDGSDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALSIKSAI 816
            S++L+EL K   K            L+EV  +E + Y    N  K +     A +  +AI
Sbjct: 151  SQLLRELKKMDDK----------ALLVEVQLLESKTYHALSNLPKARAALTSARTTANAI 200

Query: 817  P-HPRIMGIIRECGGKMHMAE-RQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLANML 990
               P++   +    G +H AE + W  A + F+EAF+ YD   +P+ I  LKY++L  ++
Sbjct: 201  YCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIM 260

Query: 991  MESEVNP---FDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFI 1161
            + +  +      G+ A  Y    +  A+  +  A +   + +FEK L   R  + DDP I
Sbjct: 261  LNTPEDVQALVSGKLALRYAGR-QTEALKCVAQASKNRSLADFEKALTDYRAELRDDPII 319

Query: 1162 RNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHID 1341
              ++  L  N+  Q L+++I+P++R++I  IS  + + + DVE+ L  +ILD +  G +D
Sbjct: 320  STHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILD 379

Query: 1342 QVNKLLECGDRSKGMRKYQAIDKWNTQLKSIYQTVSNR 1455
            Q   +L   D     + Y+A  +    +  +  ++ N+
Sbjct: 380  QGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNK 417

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>Q2KI42:PSD11_BOVIN 26S proteasome non-ATPase regulatory subunit 11 - Bos taurus (Bovine)|
          Length = 422

 Score =  102 bits (254), Expect = 5e-21
 Identities = 74/278 (26%), Positives = 135/278 (48%), Gaps = 5/278 (1%)
 Frame = +1

Query: 637  SKILKELHKSCQKEDGSDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALSIKSAI 816
            S++L+EL K   K            L+EV  +E + Y    N  K +     A +  +AI
Sbjct: 151  SQLLRELKKMDDK----------ALLVEVQLLESKTYHALSNLPKARAALTSARTTANAI 200

Query: 817  P-HPRIMGIIRECGGKMHMAE-RQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLANML 990
               P++   +    G +H AE + W  A + F+EAF+ YD   +P+ I  LKY++L  ++
Sbjct: 201  YCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIM 260

Query: 991  MESEVNP---FDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFI 1161
            + +  +      G+ A  Y    +  A+  +  A +   + +FEK L   R  + DDP I
Sbjct: 261  LNTPEDVQALVSGKLALRYAGR-QTEALKCVAQASKNRSLADFEKALTDYRAELRDDPII 319

Query: 1162 RNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHID 1341
              ++  L  N+  Q L+++I+P++R++I  IS  + + + DVE+ L  +ILD +  G +D
Sbjct: 320  STHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILD 379

Query: 1342 QVNKLLECGDRSKGMRKYQAIDKWNTQLKSIYQTVSNR 1455
            Q   +L   D     + Y+A  +    +  +  ++ N+
Sbjct: 380  QGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNK 417

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>Q8BG32:PSD11_MOUSE 26S proteasome non-ATPase regulatory subunit 11 - Mus musculus|
            (Mouse)
          Length = 422

 Score =  101 bits (252), Expect = 9e-21
 Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 5/260 (1%)
 Frame = +1

Query: 637  SKILKELHKSCQKEDGSDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALSIKSAI 816
            S++L+EL K   K            L+EV  +E + Y    N  K +     A +  +AI
Sbjct: 151  SQLLRELKKMDDK----------ALLVEVQLLESKTYHALSNLPKARAALTSARTTANAI 200

Query: 817  P-HPRIMGIIRECGGKMHMAE-RQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLANML 990
               P++   +    G +H AE + W  A + F+EAF+ YD   +P+ I  LKY++L  ++
Sbjct: 201  YCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIM 260

Query: 991  MESEVNP---FDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFI 1161
            + +  +      G+ A  Y    +  A+  +  A +   + +FEK L   R  + DDP I
Sbjct: 261  LNTPEDVQALVSGKLALRYAGR-QTEALKCVAQASKNRSLADFEKALTDYRAELRDDPII 319

Query: 1162 RNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHID 1341
              ++  L  N+  Q L+++I+P++R++I  IS  + + + DVE+ L  +ILD +  G +D
Sbjct: 320  STHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILD 379

Query: 1342 QVNKLLECGDRSKGMRKYQA 1401
            Q   +L   D     + Y+A
Sbjct: 380  QGEGVLIIFDEPPVDKTYEA 399

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>P34481:YMJ5_CAEEL Uncharacterized protein F59B2.5 - Caenorhabditis elegans|
          Length = 468

 Score = 87.4 bits (215), Expect = 2e-16
 Identities = 64/280 (22%), Positives = 135/280 (48%), Gaps = 6/280 (2%)
 Frame = +1

Query: 613  DMGEYGRMSKILKELHKSCQKEDGSDDQKKGTQLLEVYAIEIQMYTETKNNKKLKE-LYQ 789
            D+ ++    K+ ++L K  +K +  +       L+EV   E +      N  K K  L  
Sbjct: 183  DIRDFTNAQKLAQDLSKELKKLEDRE------LLIEVSVEESKSSFNLNNLAKAKTALLT 236

Query: 790  RALSIKSAIPHPRIMGIIRECGGKMHMAE-RQWADAATDFFEAFKNYDEAGNP-RRIQCL 963
               +  SA   P++   +    G ++ AE R +  + + F+EAF+ +   G+       L
Sbjct: 237  AKTNTNSAFASPQLQASVDMQSGVLYSAEERDYKTSFSYFYEAFEGFASIGDKINATSAL 296

Query: 964  KYLVLANMLM---ESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNR 1134
            KY++L  +++   E        +E   Y+  P I+A+ ++  A++K  + +F K L  ++
Sbjct: 297  KYMILCKIMLNETEQLAGLLAAKEIVAYQKSPRIIAIRSMADAFRKRSLKDFVKALAEHK 356

Query: 1135 RTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLIL 1314
              +++D  +  + ++L +N+  + + ++I+PY+ I + +I++ + +    VE+ +  +IL
Sbjct: 357  IELVEDKVVAVHSQNLERNMLEKEISRVIEPYSEIELSYIARVIGMTVPPVERAIARMIL 416

Query: 1315 DNRVQGHIDQVNKLLECGDRSKGMRKYQAIDKWNTQLKSI 1434
            D ++ G IDQ       GD      K  A +++   LK+I
Sbjct: 417  DKKLMGSIDQ------HGDTVVVYPKADAANQFTRSLKTI 450

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>Q9P7S2:RPN6_SCHPO Probable 26S proteasome regulatory subunit rpn6 - Schizosaccharomyces|
            pombe (Fission yeast)
          Length = 421

 Score = 87.0 bits (214), Expect = 2e-16
 Identities = 60/235 (25%), Positives = 121/235 (51%), Gaps = 5/235 (2%)
 Frame = +1

Query: 712  LLEVYAIEIQMYTETKNNKKLKELYQRALSIKSAIP-HPRIMGIIRECGGKMHMAERQWA 888
            L EV+ +E ++Y   +N  K +     A +  +A+   P + G +    G +H  +  + 
Sbjct: 164  LTEVHLLESKVYHAIRNIPKARASLTAAKTSANAVYCPPMLQGNLDLQSGILHADDMDFK 223

Query: 889  DAATDFFEAFKNYDEAGNPRR-IQCLKYLVLANMLMES--EVNPF-DGQEAKPYKNDPEI 1056
             A + F+EA++ +    + ++ +  LKY++L+ +++ S  EV     G+ A  Y    +I
Sbjct: 224  TAYSYFYEAYEGFTSLDDDKKALSSLKYMLLSQIMLNSVSEVKSLLTGKHAIRYAGR-DI 282

Query: 1057 LAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTR 1236
             AM  +  A++   + +FEK L+  +  +  DP IR+++  L  N+  Q LL++++P++R
Sbjct: 283  EAMRAIAQAHENRSLADFEKALQDYKPELASDPIIRSHLSSLYDNLLEQNLLRVVEPFSR 342

Query: 1237 IRIPFISQELNVPEKDVEQLLVSLILDNRVQGHIDQVNKLLECGDRSKGMRKYQA 1401
            + +  I++ + +    VE  L  +ILD    G +DQ +  L   D  +  + Y+A
Sbjct: 343  VEVSHIAELIGLSTVQVEGKLSQMILDKIFYGILDQGSGCLIVYDEPQQDKTYEA 397

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>Q12377:RPN6_YEAST 26S proteasome regulatory subunit RPN6 - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 434

 Score = 75.5 bits (184), Expect = 7e-13
 Identities = 55/221 (24%), Positives = 105/221 (47%), Gaps = 8/221 (3%)
 Frame = +1

Query: 712  LLEVYAIEIQMYTETKNNKKLKELYQRALSIKSAIPHP-RIMGIIRECGGKMHMAERQWA 888
            L++V+ +E ++Y + +N  K K     A +  ++I  P + +  +    G +H  ++ + 
Sbjct: 174  LVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYK 233

Query: 889  DAATDFFEAFKNYDEAGN----PRRIQCLKYLVLANM---LMESEVNPFDGQEAKPYKND 1047
             A + FFE+F++Y          +  Q LKY++L+ +   L++   N  + +  K     
Sbjct: 234  TAFSYFFESFESYHNLTTHNSYEKACQVLKYMLLSKIMLNLIDDVKNILNAKYTKETYQS 293

Query: 1048 PEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKP 1227
              I AM  +  AY    +++F   LK   + +M D   R++   L   +    L K+I+P
Sbjct: 294  RGIDAMKAVAEAYNNRSLLDFNTALKQYEKELMGDELTRSHFNALYDTLLESNLCKIIEP 353

Query: 1228 YTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHIDQVN 1350
            +  + I  IS+ + +  + VE  L  +ILD    G +DQ N
Sbjct: 354  FECVEISHISKIIGLDTQQVEGKLSQMILDKIFYGVLDQGN 394

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>Q9GS00:CSN1_CAEEL COP9 signalosome complex subunit 1 - Caenorhabditis elegans|
          Length = 601

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 25/110 (22%), Positives = 62/110 (56%)
 Frame = +1

Query: 1015 DGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNI 1194
            +G   K  +++P+++    L+ +Y  +      +I++S +  ++ DPFI   +++L + I
Sbjct: 382  NGTFRKLLESEPQLI---ELLGSYTSSRFGRCFEIMRSVKPRLLLDPFISRNVDELFEKI 438

Query: 1195 RTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHIDQ 1344
            R + +L+ ++PY+ I++  +++ + +   +++  L+ LI    V   IDQ
Sbjct: 439  RQKCVLQYLQPYSTIKMATMAEAVGMSSAELQLSLLELIEQKHVSLKIDQ 488

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>Q9VVU5:CSN1_DROME COP9 signalosome complex subunit 1b - Drosophila melanogaster (Fruit|
            fly)
          Length = 525

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 9/180 (5%)
 Frame = +1

Query: 847  ECG-GKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLANMLMESEVNPFDGQ 1023
            EC  G   + ++++  AA  F  A  N+D    P  I      V   +     +  FD Q
Sbjct: 279  ECAAGLAELQQKKYKVAAKHFLNA--NFDHCDFPEMISTSNVAVYGGLCA---LATFDRQ 333

Query: 1024 EAK-------PYKNDPEILA-MTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIED 1179
            E K        +K   E+   + ++I  + ++       +L   R  ++ D +I  ++  
Sbjct: 334  ELKRLVIASTSFKLFLELEPQLRDIIFKFYESKYASCLTLLDEIRDNLLVDMYIAPHVTT 393

Query: 1180 LLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHIDQVNKLL 1359
            L   IR + L++   PY    +  ++   N    D+E  ++ LILD ++Q  ID  NK+L
Sbjct: 394  LYTKIRNRALIQYFSPYMSADMHKMAMAFNSSVGDLENEVMQLILDGQIQARIDSHNKIL 453

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>Q9LQR8:PSD32_ARATH Probable 26S proteasome non-ATPase regulatory subunit 3b -|
            Arabidopsis thaliana (Mouse-ear cress)
          Length = 487

 Score = 46.2 bits (108), Expect = 4e-04
 Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 18/215 (8%)
 Frame = +1

Query: 781  LYQRALSIKSAIPHPRIMGIIRECG-----GKMHMAERQWADAATDFFEAFKNYDEAGNP 945
            LY +A  ++S  P        + C      GK+   + ++ DA     +A +    A   
Sbjct: 216  LYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVASLG 275

Query: 946  RRIQCLKYLVLANMLM----ESEVNPFDGQE--AKPYKNDPEILAMTNLIAAYQKNDIME 1107
             RIQC K+ ++  +L+    E  +    G E   +PY        +TN   A +  D+  
Sbjct: 276  FRIQCNKWAIIVRLLLGEIPERSIFTQKGMEKTLRPY------FELTN---AVRIGDLEL 326

Query: 1108 FEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNV----P 1275
            F KI +   +T  +D    N I  L  N+    L  +   Y+RI +  ++Q+L +    P
Sbjct: 327  FGKIQEKFAKTFAEDR-THNLIVRLRHNVIRTGLRNISISYSRISLQDVAQKLRLNSANP 385

Query: 1276 EKDVEQLLVSLILDNRVQGHIDQVNKLL---ECGD 1371
              D E ++   I D  +   ID  N  +   E GD
Sbjct: 386  VADAESIVAKAIRDGAIDATIDHKNGCMVSKETGD 420

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>Q9V345:CSN4_DROME COP9 signalosome complex subunit 4 - Drosophila melanogaster (Fruit|
            fly)
          Length = 407

 Score = 45.4 bits (106), Expect = 7e-04
 Identities = 49/259 (18%), Positives = 114/259 (44%), Gaps = 13/259 (5%)
 Frame = +1

Query: 715  LEVYAIEIQMYTETKNNKKLKELYQRALSIKSAIPHPRIMGIIRECGGKMHMAERQWADA 894
            L  Y    ++Y E  ++ + +    RA  +++      +  + + C  ++    R++ +A
Sbjct: 152  LGTYLKIARLYLEDNDSVQAELFINRASLLQAETNSEELQVLYKVCYARVLDYRRKFIEA 211

Query: 895  ATDFFE-AFKNYDEAGNPRRIQCLKYLVLANMLMESEVNPFDGQE-----AKPYKNDP-- 1050
            A  + E +++   + G   R+  LK  ++  +L  +      GQ+     A  +K++   
Sbjct: 212  AQRYNELSYRKIVDQGE--RMTALKKALICTVLASA------GQQRSRMLATLFKDERCQ 263

Query: 1051 -----EILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLK 1215
                  IL    L    +++++ EFE +L+ +++    D         L + +    LL 
Sbjct: 264  HLPAYGILEKMYLERIIRRSELQEFEALLQDHQKAATSDGS-----SILDRAVFEHNLLS 318

Query: 1216 LIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHIDQVNKLLECGDRSKGMRKY 1395
              K Y  I    +   L++P    E++   +I + R+ GHIDQ++ ++   +R       
Sbjct: 319  ASKLYNNITFEELGALLDIPAVKAEKIASQMITEGRMNGHIDQISAIVHFENR------- 371

Query: 1396 QAIDKWNTQLKSIYQTVSN 1452
            + + +W+ Q++S+   V++
Sbjct: 372  ELLPQWDRQIQSLCYQVNS 390

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>P45432:CSN1_ARATH COP9 signalosome complex subunit 1 - Arabidopsis thaliana (Mouse-ear|
            cress)
          Length = 441

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 41/186 (22%), Positives = 81/186 (43%), Gaps = 7/186 (3%)
 Frame = +1

Query: 823  PRIMGIIRECGGKMHMAERQWADAATDFF----EAFKNYDEAGNPRRIQCLKYLVLANML 990
            P +   +R   G  H+  +++  AA  F     E   +Y+E   P+ I     L      
Sbjct: 211  PMVNAKLRCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQDIATYGGLCALASF 270

Query: 991  MESEVNP--FDGQEAKPYKN-DPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFI 1161
              SE+     D    + +    P++  + N   + +    +E+   LKSN   ++ D  +
Sbjct: 271  DRSELKQKVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASLKSN---LLLDIHL 327

Query: 1162 RNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHID 1341
             ++++ L   IR + L++   P+  + +  ++         +E+ L +LI DN++Q  ID
Sbjct: 328  HDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARID 387

Query: 1342 QVNKLL 1359
              NK+L
Sbjct: 388  SHNKIL 393

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>Q9LNU4:PSD31_ARATH Probable 26S proteasome non-ATPase regulatory subunit 3a -|
            Arabidopsis thaliana (Mouse-ear cress)
          Length = 488

 Score = 43.5 bits (101), Expect = 0.003
 Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 18/215 (8%)
 Frame = +1

Query: 781  LYQRALSIKSAIPHPRIMGIIRECG-----GKMHMAERQWADAATDFFEAFKNYDEAGNP 945
            LY +A  ++S  P        + C      GK+   + ++ DA     +A +    A   
Sbjct: 217  LYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALG 276

Query: 946  RRIQCLKYLVLANMLM----ESEVNPFDGQE--AKPYKNDPEILAMTNLIAAYQKNDIME 1107
             RIQC K+ +L  +L+    E  +    G E   +PY        +TN   A +  D+  
Sbjct: 277  FRIQCNKWAILVRLLLGEIPERSIFTQKGMEKALRPY------FELTN---AVRIGDLEL 327

Query: 1108 FEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNV----P 1275
            F  + +    T   D    N I  L  N+    L  +   Y+RI +P ++++L +    P
Sbjct: 328  FRTVQEKFLDTFAQDR-THNLIVRLRHNVIRTGLRNISISYSRISLPDVAKKLRLNSENP 386

Query: 1276 EKDVEQLLVSLILDNRVQGHIDQVNKLL---ECGD 1371
              D E ++   I D  +   ID  N  +   E GD
Sbjct: 387  VADAESIVAKAIRDGAIDATIDHKNGCMVSKETGD 421

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>P93768:PSMD3_TOBAC Probable 26S proteasome non-ATPase regulatory subunit 3 - Nicotiana|
            tabacum (Common tobacco)
          Length = 488

 Score = 42.0 bits (97), Expect = 0.008
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 10/175 (5%)
 Frame = +1

Query: 856  GKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLANMLM----ESEVNPFDGQ 1023
            GK+   + ++ DA     +A +   +A    R+QC K+ ++  +L+    E  V    G 
Sbjct: 247  GKIRTIQLEYTDAKESLLQAARKAPQAALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGM 306

Query: 1024 E--AKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIR 1197
            E   +PY        +TN   A +  D+  F K+ +    T   D    N I  L  N+ 
Sbjct: 307  EKALRPY------FELTN---AVRIGDLELFRKVAEKFSSTFSSDG-TNNLIVRLRHNVI 356

Query: 1198 TQVLLKLIKPYTRIRIPFISQELNV----PEKDVEQLLVSLILDNRVQGHIDQVN 1350
               L  +   Y+RI +  ++++L +    P  D E ++   I D  +   +D  N
Sbjct: 357  RTGLRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATLDHAN 411

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>Q06364:PSMD3_DAUCA Probable 26S proteasome non-ATPase regulatory subunit 3 - Daucus|
            carota (Carrot)
          Length = 489

 Score = 38.1 bits (87), Expect = 0.12
 Identities = 48/205 (23%), Positives = 80/205 (39%), Gaps = 15/205 (7%)
 Frame = +1

Query: 781  LYQRALSIKSAIPHPRIMGIIRECG-----GKMHMAERQWADAATDFFEAFKNYDEAGNP 945
            LY +A  ++S  P        + C      GK+   + ++ DA     +A +    A   
Sbjct: 218  LYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESXLQAARKAPVAALG 277

Query: 946  RRIQCLKYLVLANMLM----ESEVNPFDGQE--AKPYKNDPEILAMTNLIAAYQKNDIME 1107
             R+QC K+ V+  +L+    E  V    G E   +PY        +TN   A +  D+  
Sbjct: 278  FRVQCNKWAVIVRLLLGEIPERTVFMQKGMEKALRPY------FXLTN---AVRIGDLEL 328

Query: 1108 FEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNV----P 1275
            F  +      T   D    N I  L  N+    L  +   Y+RI +  ++++L +    P
Sbjct: 329  FRXVADKFASTFTADR-THNLIVRLRHNVIRTGLRNISISYSRISLVDVARKLRLDSPNP 387

Query: 1276 EKDVEQLLVSLILDNRVQGHIDQVN 1350
              D E ++   I D  +   ID  N
Sbjct: 388  VADAESIVSKAIRDGAIDATIDHAN 412

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>Q20585:PSMD6_CAEEL 26S proteasome non-ATPase regulatory subunit 6 - Caenorhabditis|
            elegans
          Length = 410

 Score = 37.7 bits (86), Expect = 0.15
 Identities = 20/87 (22%), Positives = 42/87 (48%)
 Frame = +1

Query: 1150 DPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQ 1329
            D ++  +     + +R +   + + PY  +RI  ++++  V    +++ L  LI   ++Q
Sbjct: 306  DRYLSPHFNYYSRGMRHRAYEQFLTPYKTVRIDMMAKDFGVSRAFIDRELHRLIATGQLQ 365

Query: 1330 GHIDQVNKLLECGDRSKGMRKYQAIDK 1410
              ID VN ++E   R      Y+A+ K
Sbjct: 366  CRIDAVNGVIEVNHRDSKNHLYKAVIK 392

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>Q99LD4:CSN1_MOUSE COP9 signalosome complex subunit 1 - Mus musculus (Mouse)|
          Length = 471

 Score = 37.0 bits (84), Expect = 0.26
 Identities = 20/86 (23%), Positives = 39/86 (45%)
 Frame = +1

Query: 1114 KILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQ 1293
            K+L   +  ++ D ++  ++  L   IR + L++   PY    +  ++   N     +E 
Sbjct: 323  KMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALED 382

Query: 1294 LLVSLILDNRVQGHIDQVNKLLECGD 1371
             L  LIL+  +   ID  +K+L   D
Sbjct: 383  ELTQLILEGLINARIDSHSKILYARD 408

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>Q6NRT5:CSN1_XENLA COP9 signalosome complex subunit 1 - Xenopus laevis (African clawed|
            frog)
          Length = 487

 Score = 36.6 bits (83), Expect = 0.34
 Identities = 20/86 (23%), Positives = 39/86 (45%)
 Frame = +1

Query: 1114 KILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQ 1293
            K+L   +  ++ D ++  ++  L   IR + L++   PY    +  ++   N     +E 
Sbjct: 339  KMLDEIKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMYKMATAFNTTVSALED 398

Query: 1294 LLVSLILDNRVQGHIDQVNKLLECGD 1371
             L  LIL+  +   ID  +K+L   D
Sbjct: 399  ELTQLILEGLINARIDSHSKILYARD 424

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>Q13098:CSN1_HUMAN COP9 signalosome complex subunit 1 - Homo sapiens (Human)|
          Length = 471

 Score = 36.6 bits (83), Expect = 0.34
 Identities = 19/86 (22%), Positives = 39/86 (45%)
 Frame = +1

Query: 1114 KILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQ 1293
            K+L   +  ++ D ++  ++  L   IR + L++   PY    +  ++   N     +E 
Sbjct: 323  KMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALED 382

Query: 1294 LLVSLILDNRVQGHIDQVNKLLECGD 1371
             L  LIL+  +   +D  +K+L   D
Sbjct: 383  ELTQLILEGLISARVDSHSKILYARD 408

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>Q6H236:PEG3_BOVIN Paternally expressed gene 3 protein - Bos taurus (Bovine)|
          Length = 2387

 Score = 36.2 bits (82), Expect = 0.44
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +2

Query: 149  GSDADMEDYGFEYSDDEPEEQDVDIENQYYNSKGMVETDPEGA-----LAGFDAVVRMEP 313
            G D + +  G E  ++E EEQ++ +E  YY+     ET P GA     L    ++V +EP
Sbjct: 2283 GDDDEPDGAGIEDPEEEGEEQEIQVEEPYYDCGECGETFPSGAAYAEHLTAHASLVILEP 2342

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>Q8L5U0:CSN4_ARATH COP9 signalosome complex subunit 4 - Arabidopsis thaliana (Mouse-ear|
            cress)
          Length = 397

 Score = 34.7 bits (78), Expect = 1.3
 Identities = 28/135 (20%), Positives = 58/135 (42%)
 Frame = +1

Query: 1048 PEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKP 1227
            PEI A +  +  +QK  + +        + T++D   I +             LL   K 
Sbjct: 275  PEIDAFSEELRPHQKASLPD--------KSTVLDRAMIEHN------------LLSASKL 314

Query: 1228 YTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQGHIDQVNKLLECGDRSKGMRKYQAID 1407
            YT IR   +   L +  +  E++  ++I  +R++G IDQ   ++   D        + + 
Sbjct: 315  YTNIRFDELGTLLAIDPRKAEKIAANMIGQDRMRGSIDQEEAVIHFED------DVEELQ 368

Query: 1408 KWNTQLKSIYQTVSN 1452
            +W+ Q+  + Q +++
Sbjct: 369  QWDQQISGLCQALND 383

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>Q2KJC1:CDC5L_BOVIN Cell division cycle 5-like protein - Bos taurus (Bovine)|
          Length = 802

 Score = 34.3 bits (77), Expect = 1.7
 Identities = 23/88 (26%), Positives = 41/88 (46%)
 Frame = +1

Query: 742  MYTETKNNKKLKELYQRALSIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 921
            M TE K   K+    ++ + I       R MG++++        E+ + +  T  FE  K
Sbjct: 703  MTTEAKRAAKM----EKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAYLELRT--FEELK 756

Query: 922  NYDEAGNPRRIQCLKYLVLANMLMESEV 1005
             ++++  PRR++CLK  V      E E+
Sbjct: 757  KHEDSAIPRRLECLKEDVQRQQEREKEL 784

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>Q21219:OPT2_CAEEL Oligopeptide transporter 2 - Caenorhabditis elegans|
          Length = 835

 Score = 33.9 bits (76), Expect = 2.2
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -2

Query: 1154 GSSIIVLLLLFRIFSNSMMSFFWYAAIKFVIARI 1053
            G SIIV++ +  +F N  + FF YAA  FV+  I
Sbjct: 745  GDSIIVVITILNLFENMAVEFFVYAAAMFVVIAI 778

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>Q10335:RPN7_SCHPO Probable 26S proteasome regulatory subunit rpn7 - Schizosaccharomyces|
            pombe (Fission yeast)
          Length = 409

 Score = 33.9 bits (76), Expect = 2.2
 Identities = 20/87 (22%), Positives = 43/87 (49%)
 Frame = +1

Query: 1150 DPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRVQ 1329
            D F+  +    ++ +R +   +L++ Y  + I  ++    V    +++ L S I DN++ 
Sbjct: 300  DQFLVAHYRYYVREMRRRAYAQLLESYRALSIDSMAASFGVSVDYIDRDLASFIPDNKLN 359

Query: 1330 GHIDQVNKLLECGDRSKGMRKYQAIDK 1410
              ID+VN ++      +  R+YQ + K
Sbjct: 360  CVIDRVNGVVFTNRPDEKNRQYQEVVK 386

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>O08837:CDC5L_RAT Cell division cycle 5-related protein - Rattus norvegicus (Rat)|
          Length = 802

 Score = 33.1 bits (74), Expect = 3.8
 Identities = 23/88 (26%), Positives = 40/88 (45%)
 Frame = +1

Query: 742  MYTETKNNKKLKELYQRALSIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 921
            M TE K   K+    ++ + I       R MG++++        E+   +  T  FE  K
Sbjct: 703  MTTEAKRAAKM----EKKMKILLGGYQSRAMGLLKQLNDLWDQIEQAHLELRT--FEELK 756

Query: 922  NYDEAGNPRRIQCLKYLVLANMLMESEV 1005
             ++++  PRR++CLK  V      E E+
Sbjct: 757  KHEDSAIPRRLECLKEDVQRQQEREKEL 784

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>Q6A068:CDC5L_MOUSE Cell division cycle 5-related protein - Mus musculus (Mouse)|
          Length = 802

 Score = 32.7 bits (73), Expect = 4.9
 Identities = 23/88 (26%), Positives = 40/88 (45%)
 Frame = +1

Query: 742  MYTETKNNKKLKELYQRALSIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 921
            M TE K   K+    ++ + I       R MG++++        E+   +  T  FE  K
Sbjct: 703  MTTEAKRAAKM----EKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRT--FEELK 756

Query: 922  NYDEAGNPRRIQCLKYLVLANMLMESEV 1005
             ++++  PRR++CLK  V      E E+
Sbjct: 757  KHEDSAIPRRLECLKEDVQRQQEREKEL 784

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>Q99459:CDC5L_HUMAN Cell division cycle 5-like protein - Homo sapiens (Human)|
          Length = 802

 Score = 32.7 bits (73), Expect = 4.9
 Identities = 23/88 (26%), Positives = 40/88 (45%)
 Frame = +1

Query: 742  MYTETKNNKKLKELYQRALSIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 921
            M TE K   K+    ++ + I       R MG++++        E+   +  T  FE  K
Sbjct: 703  MTTEAKRAAKM----EKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRT--FEELK 756

Query: 922  NYDEAGNPRRIQCLKYLVLANMLMESEV 1005
             ++++  PRR++CLK  V      E E+
Sbjct: 757  KHEDSAIPRRLECLKEDVQRQQEREKEL 784

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>Q48QX0:RUVX_STRPM Putative Holliday junction resolvase - Streptococcus pyogenes|
           serotype M28
          Length = 139

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 248 GMVETDPEGALAGFDAVVRMEPEKAEWGFKALKQTVKLY 364
           G+  +DP G  A    +++++ EKAE+GF  L++ VK Y
Sbjct: 14  GVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQY 52

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>Q1J498:RUVX_STRPF Putative Holliday junction resolvase - Streptococcus pyogenes|
           serotype M4 (strain MGAS10750)
          Length = 139

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 248 GMVETDPEGALAGFDAVVRMEPEKAEWGFKALKQTVKLY 364
           G+  +DP G  A    +++++ EKAE+GF  L++ VK Y
Sbjct: 14  GVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQY 52

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>Q1JEI0:RUVX_STRPD Putative Holliday junction resolvase - Streptococcus pyogenes|
           serotype M2 (strain MGAS10270)
          Length = 139

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 248 GMVETDPEGALAGFDAVVRMEPEKAEWGFKALKQTVKLY 364
           G+  +DP G  A    +++++ EKAE+GF  L++ VK Y
Sbjct: 14  GVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQY 52

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>Q1JJH9:RUVX_STRPC Putative Holliday junction resolvase - Streptococcus pyogenes|
           serotype M12 (strain MGAS9429)
          Length = 139

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 248 GMVETDPEGALAGFDAVVRMEPEKAEWGFKALKQTVKLY 364
           G+  +DP G  A    +++++ EKAE+GF  L++ VK Y
Sbjct: 14  GVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQY 52

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>Q1J9D0:RUVX_STRPB Putative Holliday junction resolvase - Streptococcus pyogenes|
           serotype M12 (strain MGAS2096)
          Length = 139

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 248 GMVETDPEGALAGFDAVVRMEPEKAEWGFKALKQTVKLY 364
           G+  +DP G  A    +++++ EKAE+GF  L++ VK Y
Sbjct: 14  GVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQY 52

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>P67495:RUVX_STRP8 Putative Holliday junction resolvase - Streptococcus pyogenes|
           serotype M18
          Length = 139

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 248 GMVETDPEGALAGFDAVVRMEPEKAEWGFKALKQTVKLY 364
           G+  +DP G  A    +++++ EKAE+GF  L++ VK Y
Sbjct: 14  GVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQY 52

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>Q5X9I3:RUVX_STRP6 Putative Holliday junction resolvase - Streptococcus pyogenes|
           serotype M6
          Length = 139

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 248 GMVETDPEGALAGFDAVVRMEPEKAEWGFKALKQTVKLY 364
           G+  +DP G  A    +++++ EKAE+GF  L++ VK Y
Sbjct: 14  GVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQY 52

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>P67494:RUVX_STRP3 Putative Holliday junction resolvase - Streptococcus pyogenes|
           serotype M3
          Length = 139

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 248 GMVETDPEGALAGFDAVVRMEPEKAEWGFKALKQTVKLY 364
           G+  +DP G  A    +++++ EKAE+GF  L++ VK Y
Sbjct: 14  GVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQY 52

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>Q99XP4:RUVX_STRP1 Putative Holliday junction resolvase - Streptococcus pyogenes|
           serotype M1
          Length = 139

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 248 GMVETDPEGALAGFDAVVRMEPEKAEWGFKALKQTVKLY 364
           G+  +DP G  A    +++++ EKAE+GF  L++ VK Y
Sbjct: 14  GVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQY 52

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>O73700:CAC1D_CHICK Voltage-dependent L-type calcium channel subunit alpha-1D - Gallus|
            gallus (Chicken)
          Length = 2190

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +2

Query: 122  SGRLFPAVMGSDADMEDYGFEYSDDEPE 205
            +G +FP +   D +++D+G  YSD+EPE
Sbjct: 2145 NGDMFPILSRQDYELQDFGPGYSDEEPE 2172

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>Q99958:FOXC2_HUMAN Forkhead box protein C2 - Homo sapiens (Human)|
          Length = 501

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -1

Query: 345 LRALNPHSAFSGSMRTTASKPASAPSGSV 259
           +  L+P SA  GS R+ AS PA +P GS+
Sbjct: 228 VETLSPESALQGSPRSAASTPAGSPDGSL 256

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>O67310:Y1273_AQUAE UPF0169 lipoprotein aq_1273 precursor - Aquifex aeolicus|
          Length = 306

 Score = 32.0 bits (71), Expect = 8.3
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
 Frame = +2

Query: 377 KYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQHFNLLQEFYQTTLKALE- 553
           K ++ ++  +E L  +KS   +    K I N + F+ G   +   + +E ++   +AL+ 
Sbjct: 228 KLEDFIEEAKEKLEEVKSPEEK----KAIENRIKFLEGEVKRWEKIKEEAFKEAERALQR 283

Query: 554 --EAKNERLWFKTNLKLCKIW 610
             E   E  ++K  LKL K W
Sbjct: 284 YREVYGENAYYKELLKLMKKW 304

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>P36444:MAOC_FLAPR NADP-dependent malic enzyme, chloroplast precursor - Flaveria|
           pringlei
          Length = 647

 Score = 32.0 bits (71), Expect = 8.3
 Identities = 19/62 (30%), Positives = 32/62 (51%)
 Frame = +2

Query: 356 KLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQHFNLLQEFYQT 535
           + Y  L + +     Y E++    SAV +NY EK +    DF + +A   F+LL+++  T
Sbjct: 299 EFYIGLRQRRASGKEYAELMNEFMSAVKQNYGEKVLIQFEDFANHNA---FDLLEKYRTT 355

Query: 536 TL 541
            L
Sbjct: 356 HL 357

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>O49160:IF38_ARATH Eukaryotic translation initiation factor 3 subunit 8 - Arabidopsis|
            thaliana (Mouse-ear cress)
          Length = 900

 Score = 32.0 bits (71), Expect = 8.4
 Identities = 24/84 (28%), Positives = 40/84 (47%)
 Frame = +1

Query: 979  ANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPF 1158
            +N++++  V P + + +KP   D +I    NL+A  ++ D  EF K L+        DP 
Sbjct: 325  SNIVVDDTVEPDENETSKPTDYDGKIRVWGNLVAFLERVD-TEFFKSLQ------CIDPH 377

Query: 1159 IRNYIEDLLKNIRTQVLLKLIKPY 1230
             R Y+E L        L + I+ Y
Sbjct: 378  TREYVERLRDEPMFLALAQNIQDY 401


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 305,522,718
Number of extensions: 6956128
Number of successful extensions: 21642
Number of sequences better than 10.0: 50
Number of HSP's gapped: 21599
Number of HSP's successfully gapped: 60
Length of query: 580
Length of database: 100,686,439
Length adjustment: 119
Effective length of query: 461
Effective length of database: 68,045,334
Effective search space: 31368898974
Effective search space used: 31368898974
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result