ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf166o23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK105426:Os06g0703300 30 4.0
2AK102730:Os06g0703300 30 4.0
3AK122164:Os02g0105100 30 5.2
4Os03g0738900:Os03g0738900 30 5.2
5AK121448:Os08g0451600 30 6.8
6AK111226:Os03g0767600 29 8.9
7AK108478:Os01g0858500 29 8.9 
>AK105426:Os06g0703300 |
          Length = 811
 Score = 30.4 bits (67), Expect = 4.0
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +2

Query: 905  VEIARELSICSYFARVLHPAMVSLSSPVLLFPRHHLKCA 1021
            +EIARELS   Y+  V+HP M+S SS  +   R    CA
Sbjct: 629  MEIARELSNYLYYIMVVHPLMLS-SSTTMAIKRCRDTCA 666
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>AK102730:Os06g0703300 |
          Length = 811

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +2

Query: 905  VEIARELSICSYFARVLHPAMVSLSSPVLLFPRHHLKCA 1021
            +EIARELS   Y+  V+HP M+S SS  +   R    CA
Sbjct: 629  MEIARELSNYLYYIMVVHPLMLS-SSTTMAIKRCRDTCA 666
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>AK122164:Os02g0105100 |
          Length = 683

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +3

Query: 522 FISGERRRRCCFIFTGL*CPRPTDIFSNDSRYAFSRSSHLSEAPEGSGSSDIW 680
           F+SG   R  C +  G    +P D+F+ D+  + +  S     P  +G  D W
Sbjct: 55  FLSGSPLRTLCLLIAG----QPADVFNADNNISSNYGSQQPMEPSPNGMLDDW 103
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>Os03g0738900:Os03g0738900 |
          Length = 632

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 449 FCDILLVMAESVDASDPSAYAAVDVYLRGTP 541
           FC++ L + +     D   Y AVD+YL+  P
Sbjct: 400 FCELALALPDHARVYDDGVYRAVDIYLKAHP 430
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>AK121448:Os08g0451600 |
          Length = 713

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
 Frame = +3

Query: 1569 CWCIILPLGEQFD*RLRITIQLVISNEVADSL-----SYIKKLQTKKKK 1700
            CWCI+  LG + D R  + +QL  + + A ++     S + +L TK+ K
Sbjct: 1    CWCIVFMLGLKEDIRAAVMVQLPTTVQQAAAVALMQESVLLELSTKQSK 49
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>AK111226:Os03g0767600 |
          Length = 683

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 449 FCDILLVMAESVDASDPSAYAAVDVYLRGTP 541
           FCD+   + +     D   Y AVD+YL+  P
Sbjct: 476 FCDLAWALPDGARVYDDGLYRAVDIYLKAHP 506
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>AK108478:Os01g0858500 |
          Length = 301

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = -2

Query: 924 SSRAISTPQTPPNILFIVLWPAKRAHP-TWQGP--SYPTNVLVHQVVQYARPHMRI 766
           SS ++   QTPPN+   +  P  R HP  +  P  S+P N L+ Q  Q    H  +
Sbjct: 3   SSPSMPLQQTPPNVSAPLRPPQHRPHPRPYHAPAISHPQNALLTQQQQKLPQHQHL 58


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 46,326,551
Number of extensions: 1023587
Number of successful extensions: 2291
Number of sequences better than 10.0: 7
Number of HSP's gapped: 2290
Number of HSP's successfully gapped: 7
Length of query: 567
Length of database: 15,399,855
Length adjustment: 106
Effective length of query: 461
Effective length of database: 11,155,509
Effective search space: 5142689649
Effective search space used: 5142689649
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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