ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf166o04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100856:Os09g0306800 | 590 | e-169 | 2 | AY321106:Os04g0162100 | 411 | e-115 | 3 | AK120470:Os04g0162100 | 411 | e-115 | 4 | AK069556:Os04g0162100 | 375 | e-104 | 5 | AF140498:Os04g0162100 | 154 | 3e-37 | 6 | Os06g0554600:Os06g0554600 | 33 | 0.67 | 7 | AK106140:Os08g0195400 | 31 | 3.3 | 8 | AK104389:Os08g0195400 | 31 | 3.3 | 9 | AK070464:Os08g0195400 | 31 | 3.3 | 10 | Os12g0578000:Os12g0578000 | 30 | 4.4 | 11 | AK067055:Os02g0644600 | 29 | 9.7 |
|---|
>AK100856:Os09g0306800 | Length = 604 Score = 590 bits (1522), Expect = e-169 Identities = 293/423 (69%), Positives = 343/423 (81%), Gaps = 6/423 (1%) Frame = +1 Query: 169 MCRQPSTPDLSPDEQLAAEETFKLYCKPVELCNVIQKRALDNPAFLQRCLHYMIQASRKK 348 MCR LSPDEQLAAEE+F LYCKPVEL N+IQ+R++ NPAFLQRCL Y I A RKK Sbjct: 1 MCRHQPRARLSPDEQLAAEESFALYCKPVELYNIIQRRSIKNPAFLQRCLLYKIHARRKK 60 Query: 349 RIQLTVSLSRGI--ECPDQNIFPLYLLLATPTSDNIPLEGHSPIYRFSRACLLTSFSEFA 522 R +T+SLS G E QNIFPLY+LLA PT+ N+ LEGHSPIYRFSRACLLTSF EF Sbjct: 61 RSLITISLSGGTNKELRAQNIFPLYVLLARPTN-NVSLEGHSPIYRFSRACLLTSFHEFG 119 Query: 523 S---TKATFMIPDVKNMATSRACNLSVILIRCASQGQA-GENNCSGDHVEASALRKLEGK 690 + T+ATF+IPDVKN+ATSRAC+L++ILI C Q +NNCSG+HVE S L+KLEGK Sbjct: 120 NKDYTEATFVIPDVKNLATSRACSLNIILISCGRAEQTFDDNNCSGNHVEGSTLQKLEGK 179 Query: 691 CFWGKIPINLLGSCLENCVTLNLGHTVELASTVTMSPSFLEPKFLEQDSCLTFCSHKVDA 870 CFWGKIPI+LL S L NCV+L+LGHTVE++STV M+PSFLEPKFLE DSCLTFCS KVDA Sbjct: 180 CFWGKIPIDLLASSLGNCVSLSLGHTVEMSSTVEMTPSFLEPKFLEDDSCLTFCSQKVDA 239 Query: 871 TGSYQLQVGISVQEAGARDMSEXXXXXXXXXXXXXXXXXHIIRLRAGNVIFNFKYYNNTM 1050 TGS+QLQV IS QEAGA+DMSE HIIRLR+GNV+FN+KYYNNTM Sbjct: 240 TGSFQLQVSISAQEAGAKDMSESPYSVYSYNDVPPSSLTHIIRLRSGNVLFNYKYYNNTM 299 Query: 1051 QKTEVTEDFACAFCLVKCGSYKGLGCHLNSTHDLFHFEFWISEECQAVNVSLKADAWKME 1230 QKTEVTEDF+C FCLV CGS+KGLGCHLN++HDLFH+EFWISEECQAVNVSLK D+W+ E Sbjct: 300 QKTEVTEDFSCPFCLVPCGSFKGLGCHLNASHDLFHYEFWISEECQAVNVSLKTDSWRTE 359 Query: 1231 LMGKGVDPRHQTFSYCSRLKVRRRRSVATAENISPVHPHIMDSGSPEDTQAGSKDEFVQR 1410 L+ +GVDPRHQTFSY SR K R+R + +++ I VHPHI+DSGSPED QAGS+D++VQR Sbjct: 360 LLAEGVDPRHQTFSYRSRFKKRKRVEI-SSDKIRHVHPHIVDSGSPEDAQAGSEDDYVQR 418 Query: 1411 EDG 1419 E+G Sbjct: 419 ENG 421 Score = 55.5 bits (132), Expect = 1e-07 Identities = 27/43 (62%), Positives = 35/43 (81%) Frame = +3 Query: 1560 DNNSVALDSAEHDHSLNGSNLTPPTVLEFGKTRKLSAERSDPR 1688 + +SVA S + +SL+GSNL+ PTVL+FGKTRKLS ER+DPR Sbjct: 420 NGSSVAHASVDPANSLHGSNLSAPTVLQFGKTRKLSVERADPR 462
>AY321106:Os04g0162100 | Length = 624 Score = 411 bits (1057), Expect = e-115 Identities = 222/430 (51%), Positives = 284/430 (66%), Gaps = 12/430 (2%) Frame = +1 Query: 163 DHMCRQPSTPDLSPDEQLAAEETFKLYCKPVELCNVIQKRALDNPAFLQRCLHYMIQASR 342 D MC + S S D+QL EE LYCKP+EL N I+ RA++NP +LQRCL Y I+A + Sbjct: 25 DQMCCEHSVAQFSSDQQLNPEENLALYCKPLELYNFIRHRAIENPPYLQRCLLYKIRAKQ 84 Query: 343 KKRIQLTVSL--SRGIECPDQNIFPLYLLLATPTSDNIPLEGHSPIYRFSRACLLTSFSE 516 KKRIQ+T+SL S E QNIFPLY+L A PTS N+P+EGHSPIYRFS+A LLTSF++ Sbjct: 85 KKRIQITISLPGSNNKELQAQNIFPLYVLFARPTS-NVPIEGHSPIYRFSQARLLTSFND 143 Query: 517 FAST---KATFMIPDVKNMATSRACNLSVILIRCASQGQAG-------ENNCSGDHVEAS 666 + +ATF+IPD++ + ++A L+ IL+ ++ G EN+CS HV+ S Sbjct: 144 SGNNDRAEATFVIPDLETLIATQAYGLTFILVSRGTKKNKGRTGQNLCENDCSEKHVDYS 203 Query: 667 ALRKLEGKCFWGKIPINLLGSCLENCVTLNLGHTVELASTVTMSPSFLEPKFLEQDSCLT 846 +LRKL GKCFWGKIPI LL S LE C L LGH VE ++ MSP +LEP FLE D+CL+ Sbjct: 204 SLRKLAGKCFWGKIPITLLNSSLETCADLILGHIVESPISICMSPGYLEPTFLEHDNCLS 263 Query: 847 FCSHKVDATGSYQLQVGISVQEAGARDMSEXXXXXXXXXXXXXXXXXHIIRLRAGNVIFN 1026 FCS K DA YQLQV +S EAGA+D+ + I+RLR GNV+FN Sbjct: 264 FCSRKADAMVPYQLQVKVSAAEAGAKDILKSPYNSFSYSDVPPSLLLRIVRLRVGNVLFN 323 Query: 1027 FKYYNNTMQKTEVTEDFACAFCLVKCGSYKGLGCHLNSTHDLFHFEFWISEECQAVNVSL 1206 +K NT Q +EVTEDF C FCLV+CG++KGL CH+ S+HDLFH+EFWISE+ QAVNV+L Sbjct: 324 YK---NT-QMSEVTEDFTCPFCLVRCGNFKGLECHMTSSHDLFHYEFWISEDYQAVNVTL 379 Query: 1207 KADAWKMELMGKGVDPRHQTFSYCSRLKVRRRRSVATAENISPVHPHIMDSGSPEDTQAG 1386 K D + E + VD H+ F Y SR K R + A HIM+SGSPE+TQA Sbjct: 380 KKDNMRTEFVAAEVDNSHRIFYYRSRFKKSRTEILPVAR----ADAHIMESGSPEETQAE 435 Query: 1387 SKDEFVQRED 1416 S+D+ VQ E+ Sbjct: 436 SEDD-VQEEN 444 Score = 37.7 bits (86), Expect = 0.027 Identities = 19/43 (44%), Positives = 28/43 (65%) Frame = +3 Query: 1560 DNNSVALDSAEHDHSLNGSNLTPPTVLEFGKTRKLSAERSDPR 1688 +N + +D ++ L+GSN + L FGK+RKLSA R+DPR Sbjct: 443 ENENALIDDSK---KLHGSNHSQSEFLAFGKSRKLSANRADPR 482
>AK120470:Os04g0162100 | Length = 624 Score = 411 bits (1057), Expect = e-115 Identities = 222/430 (51%), Positives = 284/430 (66%), Gaps = 12/430 (2%) Frame = +1 Query: 163 DHMCRQPSTPDLSPDEQLAAEETFKLYCKPVELCNVIQKRALDNPAFLQRCLHYMIQASR 342 D MC + S S D+QL EE LYCKP+EL N I+ RA++NP +LQRCL Y I+A + Sbjct: 25 DQMCCEHSVAQFSSDQQLNPEENLALYCKPLELYNFIRHRAIENPPYLQRCLLYKIRAKQ 84 Query: 343 KKRIQLTVSL--SRGIECPDQNIFPLYLLLATPTSDNIPLEGHSPIYRFSRACLLTSFSE 516 KKRIQ+T+SL S E QNIFPLY+L A PTS N+P+EGHSPIYRFS+A LLTSF++ Sbjct: 85 KKRIQITISLPGSNNKELQAQNIFPLYVLFARPTS-NVPIEGHSPIYRFSQARLLTSFND 143 Query: 517 FAST---KATFMIPDVKNMATSRACNLSVILIRCASQGQAG-------ENNCSGDHVEAS 666 + +ATF+IPD++ + ++A L+ IL+ ++ G EN+CS HV+ S Sbjct: 144 SGNNDRAEATFVIPDLETLIATQAYGLTFILVSRGTKKNKGRTGQNLCENDCSEKHVDYS 203 Query: 667 ALRKLEGKCFWGKIPINLLGSCLENCVTLNLGHTVELASTVTMSPSFLEPKFLEQDSCLT 846 +LRKL GKCFWGKIPI LL S LE C L LGH VE ++ MSP +LEP FLE D+CL+ Sbjct: 204 SLRKLAGKCFWGKIPITLLNSSLETCADLILGHIVESPISICMSPGYLEPTFLEHDNCLS 263 Query: 847 FCSHKVDATGSYQLQVGISVQEAGARDMSEXXXXXXXXXXXXXXXXXHIIRLRAGNVIFN 1026 FCS K DA YQLQV +S EAGA+D+ + I+RLR GNV+FN Sbjct: 264 FCSRKADAMVPYQLQVKVSAAEAGAKDILKSPYNSFSYSDVPPSLLLRIVRLRVGNVLFN 323 Query: 1027 FKYYNNTMQKTEVTEDFACAFCLVKCGSYKGLGCHLNSTHDLFHFEFWISEECQAVNVSL 1206 +K NT Q +EVTEDF C FCLV+CG++KGL CH+ S+HDLFH+EFWISE+ QAVNV+L Sbjct: 324 YK---NT-QMSEVTEDFTCPFCLVRCGNFKGLECHMTSSHDLFHYEFWISEDYQAVNVTL 379 Query: 1207 KADAWKMELMGKGVDPRHQTFSYCSRLKVRRRRSVATAENISPVHPHIMDSGSPEDTQAG 1386 K D + E + VD H+ F Y SR K R + A HIM+SGSPE+TQA Sbjct: 380 KKDNMRTEFVAAEVDNSHRIFYYRSRFKKSRTEILPVAR----ADAHIMESGSPEETQAE 435 Query: 1387 SKDEFVQRED 1416 S+D+ VQ E+ Sbjct: 436 SEDD-VQEEN 444 Score = 37.7 bits (86), Expect = 0.027 Identities = 19/43 (44%), Positives = 28/43 (65%) Frame = +3 Query: 1560 DNNSVALDSAEHDHSLNGSNLTPPTVLEFGKTRKLSAERSDPR 1688 +N + +D ++ L+GSN + L FGK+RKLSA R+DPR Sbjct: 443 ENENALIDDSK---KLHGSNHSQSEFLAFGKSRKLSANRADPR 482
>AK069556:Os04g0162100 | Length = 446 Score = 375 bits (962), Expect = e-104 Identities = 196/369 (53%), Positives = 251/369 (68%), Gaps = 12/369 (3%) Frame = +1 Query: 163 DHMCRQPSTPDLSPDEQLAAEETFKLYCKPVELCNVIQKRALDNPAFLQRCLHYMIQASR 342 D MC + S S D+QL EE LYCKP+EL N I+ RA++NP +LQRCL Y I+A + Sbjct: 82 DQMCCEHSVAQFSSDQQLNPEENLALYCKPLELYNFIRHRAIENPPYLQRCLLYKIRAKQ 141 Query: 343 KKRIQLTVSL--SRGIECPDQNIFPLYLLLATPTSDNIPLEGHSPIYRFSRACLLTSFSE 516 KKRIQ+T+SL S E QNIFPLY+L A PTS N+P+EGHSPIYRFS+A LLTSF++ Sbjct: 142 KKRIQITISLPGSNNKELQAQNIFPLYVLFARPTS-NVPIEGHSPIYRFSQARLLTSFND 200 Query: 517 FAST---KATFMIPDVKNMATSRACNLSVILIRCASQGQAG-------ENNCSGDHVEAS 666 + +ATF+IPD++ + ++A L+ IL+ ++ G EN+CS HV+ S Sbjct: 201 SGNNDRAEATFVIPDLETLIATQAYGLTFILVSRGTKKNKGRTGQNLCENDCSEKHVDYS 260 Query: 667 ALRKLEGKCFWGKIPINLLGSCLENCVTLNLGHTVELASTVTMSPSFLEPKFLEQDSCLT 846 +LRKL GKCFWGKIPI LL S LE C L LGH VE ++ MSP +LEP FLE D+CL+ Sbjct: 261 SLRKLAGKCFWGKIPITLLNSSLETCADLILGHIVESPISICMSPGYLEPTFLEHDNCLS 320 Query: 847 FCSHKVDATGSYQLQVGISVQEAGARDMSEXXXXXXXXXXXXXXXXXHIIRLRAGNVIFN 1026 FCS K DA YQLQV +S EAGA+D+ + I+RLR GNV+FN Sbjct: 321 FCSRKADAMVPYQLQVKVSAAEAGAKDILKSPYNSFSYSDVPPSLLLRIVRLRVGNVLFN 380 Query: 1027 FKYYNNTMQKTEVTEDFACAFCLVKCGSYKGLGCHLNSTHDLFHFEFWISEECQAVNVSL 1206 +K NT Q +EVTEDF C FCLV+CG++KGL CH+ S+HDLFH+EFWISE+ QAVNV+L Sbjct: 381 YK---NT-QMSEVTEDFTCPFCLVRCGNFKGLECHMTSSHDLFHYEFWISEDYQAVNVTL 436 Query: 1207 KADAWKMEL 1233 K D + E+ Sbjct: 437 KKDNMRTEV 445
>AF140498:Os04g0162100 | Length = 164 Score = 154 bits (388), Expect = 3e-37 Identities = 81/152 (53%), Positives = 108/152 (71%), Gaps = 5/152 (3%) Frame = +1 Query: 163 DHMCRQPSTPDLSPDEQLAAEETFKLYCKPVELCNVIQKRALDNPAFLQRCLHYMIQASR 342 D MC + S S D+QL EE LYCKP+EL N I+ RA++NP +LQRCL Y I+A + Sbjct: 11 DQMCCEHSVAQFSSDQQLNPEENLALYCKPLELYNFIRHRAIENPPYLQRCLLYKIRAKQ 70 Query: 343 KKRIQLTVSL--SRGIECPDQNIFPLYLLLATPTSDNIPLEGHSPIYRFSRACLLTSFSE 516 KKRIQ+T+SL S E QNIFPLY+L A PTS N+P+EGHSPIYRFS+A LLTSF++ Sbjct: 71 KKRIQITISLPGSNNKELQAQNIFPLYVLFARPTS-NVPIEGHSPIYRFSQARLLTSFND 129 Query: 517 FAS---TKATFMIPDVKNMATSRACNLSVILI 603 + +ATF+IPD++ + ++A L+ IL+ Sbjct: 130 SGNNDRAEATFVIPDLETLIATQAYGLTFILV 161
>Os06g0554600:Os06g0554600 | Length = 266 Score = 33.1 bits (74), Expect = 0.67 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = -1 Query: 1231 APFSRHQPSD*H*QPGILQISKTQSGIGHALSSSDTPG-PCSFHTLPSKRRKQN 1073 APFS + D P + +G+ S S+TP P SFH +P+KRR++N Sbjct: 77 APFSCGRALD----PALAVYDPRGAGLEVEFSCSNTPSYPSSFHLIPTKRRRRN 126
>AK106140:Os08g0195400 | Length = 283 Score = 30.8 bits (68), Expect = 3.3 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 5/63 (7%) Frame = +1 Query: 679 LEGKCFWGKIPINLLGSCLE-----NCVTLNLGHTVELASTVTMSPSFLEPKFLEQDSCL 843 L+G WG P + LGSC+ + L EL V +SP L PK Q Sbjct: 170 LQGGWIWGPSPSSFLGSCIHAGWAIRVELMLLRFKGELRGEVWLSPVKLTPKSTAQQQIS 229 Query: 844 TFC 852 C Sbjct: 230 NLC 232
>AK104389:Os08g0195400 | Length = 283 Score = 30.8 bits (68), Expect = 3.3 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 5/63 (7%) Frame = +1 Query: 679 LEGKCFWGKIPINLLGSCLE-----NCVTLNLGHTVELASTVTMSPSFLEPKFLEQDSCL 843 L+G WG P + LGSC+ + L EL V +SP L PK Q Sbjct: 170 LQGGWIWGPSPSSFLGSCIHAGWAIRVELMLLRFKGELRGEVWLSPVKLTPKSTAQQQIS 229 Query: 844 TFC 852 C Sbjct: 230 NLC 232
>AK070464:Os08g0195400 | Length = 283 Score = 30.8 bits (68), Expect = 3.3 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 5/63 (7%) Frame = +1 Query: 679 LEGKCFWGKIPINLLGSCLE-----NCVTLNLGHTVELASTVTMSPSFLEPKFLEQDSCL 843 L+G WG P + LGSC+ + L EL V +SP L PK Q Sbjct: 170 LQGGWIWGPSPSSFLGSCIHAGWAIRVELMLLRFKGELRGEVWLSPVKLTPKSTAQQQIS 229 Query: 844 TFC 852 C Sbjct: 230 NLC 232
>Os12g0578000:Os12g0578000 | Length = 611 Score = 30.4 bits (67), Expect = 4.4 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = +1 Query: 1252 PRHQTFSYCSRLKVRRRRSVATAENISPVHPHIMDSGSPEDTQAGSKDEFVQREDGG 1422 PR +F+Y +K VA + VH H++ GS EDT G+ ++GG Sbjct: 122 PRRDSFTYSFLIKALSAAGVAP---VRAVHSHVVKLGSVEDTFVGNALIDAYSKNGG 175
>AK067055:Os02g0644600 | Length = 526 Score = 29.3 bits (64), Expect = 9.7 Identities = 16/55 (29%), Positives = 29/55 (52%) Frame = +1 Query: 1141 THDLFHFEFWISEECQAVNVSLKADAWKMELMGKGVDPRHQTFSYCSRLKVRRRR 1305 T D + + I+ C +S KA+ E++ KG++P TFS ++ +R R+ Sbjct: 468 TPDAYAYTALINGYCSQGEIS-KAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRK 521 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 54,081,129 Number of extensions: 1258130 Number of successful extensions: 2889 Number of sequences better than 10.0: 11 Number of HSP's gapped: 2862 Number of HSP's successfully gapped: 14 Length of query: 612 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 505 Effective length of database: 11,115,468 Effective search space: 5613311340 Effective search space used: 5613311340 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
