ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf164h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK106291:Os11g0550900 97 5e-20
2Os11g0551300:Os11g0551300 37 0.045
3Os08g0184700:Os08g0184700 34 0.38
4Os08g0543900:Os08g0543900 33 0.50
5AK111466:Os01g0578800 31 2.5
6AK061170:Os07g0419200 31 2.5
7Os03g0289300:Os03g0289300 30 5.5
8AK110196:Os05g0516400 30 5.5
9Os06g0334700:Os06g0334700 29 9.4

>AK106291:Os11g0550900 |
          Length = 375
 Score = 96.7 bits (239), Expect = 5e-20
 Identities = 53/99 (53%), Positives = 65/99 (65%)
 Frame = +2

Query: 1034 DMESANTSSTNLHSQAMMYARLSVSPGTKMSSPMSTSYGEQFKESNGLLNVLPISAESAG 1213
            DM+ ANT ST+LHS+A MY+RL+ SP       MS S G QFKES+GLLN+LPISAESAG
Sbjct: 280  DMKLANTGSTDLHSKATMYSRLTESP------EMSGSSGHQFKESDGLLNILPISAESAG 333

Query: 1214 LLPKHTGEPKGSDIXXXXXXXXXXXXNAKFFVSQPHDPL 1330
            LLP  + +P+GSD+            +AK F  Q HD L
Sbjct: 334  LLPSRSDKPQGSDLLLEATLEAEVAEHAKSFAQQHHDEL 372



 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 63/167 (37%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
 Frame = +3

Query: 303 QHAGRLHRPAFGHPWGLLRDDEAQ*HDQDGKSGREDDRESGRSPHDLPPADG*HL*ADCS 482
           Q+AG LHRP  GHP GLL  D     D   K  R   R +GR+   L             
Sbjct: 105 QNAGVLHRPVGGHPRGLLPHD-----DDMIKIARVAGRMTGRAVGRLMLFR-----RQMD 154

Query: 483 EEGTLLILAHINTELQDAMSKLQSIGYEVQNLSRITPGQFIKRQHNTEGMTEAG----IY 650
           E         +N EL+DAM++L SI YEVQNLSR TPGQF+ RQHN  G+          
Sbjct: 155 EILEQTAAKQVNKELKDAMTQLDSIRYEVQNLSRFTPGQFM-RQHNPVGVDHEAEKNDAV 213

Query: 651 DGSATQSGXXXXXXXXXXXXXXXXXCRKNPDQFTRRLNNPDGIQNSG 791
           DGSA                      + NPD+F+ RL+N D +  SG
Sbjct: 214 DGSALNLEELRHQIRSMVHDEIESFYKTNPDKFSGRLDNADTVNRSG 260



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>Os11g0551300:Os11g0551300 |
          Length = 1192

 Score = 37.0 bits (84), Expect = 0.045
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -3

Query: 366  HHHGAGPKDDQKLAGGDAQHV 304
            HH GA PKDD +LAGG+ QH+
Sbjct: 1048 HHEGARPKDDHELAGGEPQHL 1068



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>Os08g0184700:Os08g0184700 |
          Length = 108

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 22/47 (46%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -1

Query: 287 DPPAGEIGDLTTWRGRHSWCAEAGELRCGRDSALGWSR---GGRPGR 156
           DP     G+L   R R  W  E GELR GR +  GWSR   GG  GR
Sbjct: 62  DPSPVSSGELDPCR-RTRWGDEEGELRRGRGAVGGWSRRGIGGEGGR 107



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>Os08g0543900:Os08g0543900 |
          Length = 457

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
 Frame = +3

Query: 159 PRPTTPGPAQS*VTAAPQLS------SFRAPAVP----PSPGGEISYLSCRWVSGSSGQH 308
           PR  TP    S   AA   S      S R PA P    PSP  +I   S    +GSSG H
Sbjct: 25  PRSPTPLDLSSAAAAAAAASYRRLSPSLRPPAHPQARLPSPYPQIPSSSSAAAAGSSGHH 84

Query: 309 AGRLHRPAF 335
           A  L +P F
Sbjct: 85  ARSLSQPLF 93



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>AK111466:Os01g0578800 |
          Length = 205

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 24/63 (38%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = -1

Query: 338 TKSWPVETPSMLSAGTTDPPAGEIGDLTTWRGRHSWCA-EAGELRCGRDSALGWSRGGRP 162
           T SWP  T S  +     PPAG     T  R     CA EA   RC   SA  W  G  P
Sbjct: 106 TGSWP--TCSAPAPPIRTPPAGASSSCTRRRRPACCCAAEAMSTRCITTSATRWLAGAWP 163

Query: 161 GRA 153
            R+
Sbjct: 164 SRS 166



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>AK061170:Os07g0419200 |
          Length = 269

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -1

Query: 347 PRMTKSWPVETPSMLSAGTTDPPAGEIGDLTTWRGRHSWCAEAGELR 207
           P    SW      +L+AG+   PAG +GD+  W  R S      ELR
Sbjct: 57  PASRLSWLGRHNLLLAAGSHSGPAGVVGDICLWDVRASATVPVWELR 103



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>Os03g0289300:Os03g0289300 |
          Length = 641

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -2

Query: 256 PPGEGGTAGARKLESCGAAVTQLWAGPGVVGLGEQKICIC*SRAF 122
           P  E G AG +    C A V +  AG G   +G  K CI  +R F
Sbjct: 16  PDAEPGRAGKQGKSVCAAKVHEGGAGAGDAQMGTYKCCIFFTRRF 60



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>AK110196:Os05g0516400 |
          Length = 827

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 156 SPRPTTPGPAQS*VTAAPQLSSFRAPAVPPSPGGEI 263
           +P P +P P  S V   P ++S  +P  PPSP   +
Sbjct: 131 NPPPPSPSPPPSPVNPLPPITSPPSPVSPPSPANPL 166



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>Os06g0334700:Os06g0334700 |
          Length = 210

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
 Frame = -2

Query: 250 GEGGTAGARKLESCGAAVTQLWAGPGV----VGLGEQKIC 143
           GEG   G R+L+    A ++ WAG GV    VG+G++ +C
Sbjct: 165 GEGAGRGGRRLQ----ARSRAWAGEGVADSRVGVGKEGLC 200


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 49,694,424
Number of extensions: 1169650
Number of successful extensions: 3819
Number of sequences better than 10.0: 9
Number of HSP's gapped: 3806
Number of HSP's successfully gapped: 11
Length of query: 594
Length of database: 15,399,855
Length adjustment: 106
Effective length of query: 488
Effective length of database: 11,155,509
Effective search space: 5443888392
Effective search space used: 5443888392
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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