| Clone Name | FLbaf164h11 |
|---|---|
| Clone Library Name | barley_pub |
>Q92Q24:TATB_RHIME Sec-independent protein translocase protein tatB homolog -| Rhizobium meliloti (Sinorhizobium meliloti) Length = 215 Score = 35.8 bits (81), Expect = 0.60 Identities = 18/56 (32%), Positives = 29/56 (51%) Frame = +1 Query: 307 MLGVSTGQLLVILGACSVMMKPSDMIKMARVAGRMTGRAVGRLMIYRRQMDDIFEQ 474 ML + +L+VI +++ P D+ M R GRMT + G +RRQ D+ + Sbjct: 1 MLDIGWTELVVIAIVLIIVVGPKDLPPMLRAFGRMTSKMRGMASDFRRQFDEALRE 56
>Q59I72:CTNA1_RABIT Catenin alpha-1 - Oryctolagus cuniculus (Rabbit)| Length = 907 Score = 33.9 bits (76), Expect = 2.3 Identities = 26/119 (21%), Positives = 52/119 (43%) Frame = +1 Query: 268 ISPAGGSVVPADNMLGVSTGQLLVILGACSVMMKPSDMIKMARVAGRMTGRAVGRLMIYR 447 ++ A + D+ L VS +L + C + ++ D+ + R AG + GRA + + Sbjct: 499 LTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVT 558 Query: 448 RQMDDIFEQTAAKKVPC*FLHILIRSFKMLCQSYNQLVMKFRTYLE*LLASLSKGSTTP 624 +MD+ +KV + + K+L N ++ +F +E + +LS P Sbjct: 559 SEMDNYEPGVYTEKV--------LEATKLLS---NTVMPRFTEQVEAAVEALSSDPAQP 606
>P26231:CTNA1_MOUSE Catenin alpha-1 - Mus musculus (Mouse)| Length = 906 Score = 33.9 bits (76), Expect = 2.3 Identities = 26/119 (21%), Positives = 52/119 (43%) Frame = +1 Query: 268 ISPAGGSVVPADNMLGVSTGQLLVILGACSVMMKPSDMIKMARVAGRMTGRAVGRLMIYR 447 ++ A + D+ L VS +L + C + ++ D+ + R AG + GRA + + Sbjct: 498 LTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVT 557 Query: 448 RQMDDIFEQTAAKKVPC*FLHILIRSFKMLCQSYNQLVMKFRTYLE*LLASLSKGSTTP 624 +MD+ +KV + + K+L N ++ +F +E + +LS P Sbjct: 558 SEMDNYEPGVYTEKV--------LEATKLLS---NTVMPRFTEQVEAAVEALSSDPAQP 605
>P35221:CTNA1_HUMAN Catenin alpha-1 - Homo sapiens (Human)| Length = 906 Score = 33.9 bits (76), Expect = 2.3 Identities = 26/119 (21%), Positives = 52/119 (43%) Frame = +1 Query: 268 ISPAGGSVVPADNMLGVSTGQLLVILGACSVMMKPSDMIKMARVAGRMTGRAVGRLMIYR 447 ++ A + D+ L VS +L + C + ++ D+ + R AG + GRA + + Sbjct: 498 LTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVT 557 Query: 448 RQMDDIFEQTAAKKVPC*FLHILIRSFKMLCQSYNQLVMKFRTYLE*LLASLSKGSTTP 624 +MD+ +KV + + K+L N ++ +F +E + +LS P Sbjct: 558 SEMDNYEPGVYTEKV--------LEATKLLS---NTVMPRFTEQVEAAVEALSSDPAQP 605
>Q3MHM6:CTNA1_BOVIN Catenin alpha-1 - Bos taurus (Bovine)| Length = 906 Score = 33.9 bits (76), Expect = 2.3 Identities = 26/119 (21%), Positives = 52/119 (43%) Frame = +1 Query: 268 ISPAGGSVVPADNMLGVSTGQLLVILGACSVMMKPSDMIKMARVAGRMTGRAVGRLMIYR 447 ++ A + D+ L VS +L + C + ++ D+ + R AG + GRA + + Sbjct: 498 LTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVT 557 Query: 448 RQMDDIFEQTAAKKVPC*FLHILIRSFKMLCQSYNQLVMKFRTYLE*LLASLSKGSTTP 624 +MD+ +KV + + K+L N ++ +F +E + +LS P Sbjct: 558 SEMDNYEPGVYTEKV--------LEATKLLS---NTVMPRFTEQVEAAVEALSSDPAQP 605
>Q65CL1:CTNA3_MOUSE Catenin alpha-3 - Mus musculus (Mouse)| Length = 895 Score = 33.1 bits (74), Expect = 3.9 Identities = 29/118 (24%), Positives = 52/118 (44%) Frame = +1 Query: 268 ISPAGGSVVPADNMLGVSTGQLLVILGACSVMMKPSDMIKMARVAGRMTGRAVGRLMIYR 447 ++ A + D+ L VS +L + C + ++ D + R AG + GRA I Sbjct: 493 LTEAVDDITSIDDFLAVSESHILEDVNKCIIALRDQDADNLDRAAGAIRGRAARVAHIVA 552 Query: 448 RQMDDIFEQTAAKKVPC*FLHILIRSFKMLCQSYNQLVMKFRTYLE*LLASLSKGSTT 621 +MD +E A + ++R+ L + ++ +F T + L +LSK S T Sbjct: 553 GEMDS-YEPGA-------YTEGVMRNVNFLTST---VIPEFVTQVNVALDALSKNSLT 599
>O53657:MMPL3_MYCTU Putative membrane protein mmpL3 - Mycobacterium tuberculosis| Length = 944 Score = 32.0 bits (71), Expect = 8.6 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%) Frame = +1 Query: 169 PPLD--QPKAES-RPHRNSPASAHQLCRPRQVVRSPISPAGGS 288 PP D P AES RP R+SPAS+ +L + +P +P+G S Sbjct: 784 PPHDPTHPLAESPRPARSSPASSPELTPALEATAAPAAPSGAS 826
>Q9UI47:CTNA3_HUMAN Catenin alpha-3 - Homo sapiens (Human)| Length = 895 Score = 32.0 bits (71), Expect = 8.6 Identities = 28/116 (24%), Positives = 51/116 (43%) Frame = +1 Query: 268 ISPAGGSVVPADNMLGVSTGQLLVILGACSVMMKPSDMIKMARVAGRMTGRAVGRLMIYR 447 ++ A + D+ L VS +L + C + ++ D + R AG + GRA I Sbjct: 493 LTEAVDDITSIDDFLAVSESHILEDVNKCIIALRDQDADNLDRAAGAIRGRAARVAHIVT 552 Query: 448 RQMDDIFEQTAAKKVPC*FLHILIRSFKMLCQSYNQLVMKFRTYLE*LLASLSKGS 615 +MD +E A + ++R+ L + ++ +F T + L +LSK S Sbjct: 553 GEMDS-YEPGA-------YTEGVMRNVNFLTST---VIPEFVTQVNVALEALSKSS 597 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 304,331,529 Number of extensions: 6789554 Number of successful extensions: 17043 Number of sequences better than 10.0: 8 Number of HSP's gapped: 17009 Number of HSP's successfully gapped: 8 Length of query: 594 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 475 Effective length of database: 68,045,334 Effective search space: 32321533650 Effective search space used: 32321533650 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)