ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf166m01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK111211: | 30 | 0.94 | 2 | AK072126:Os03g0321500 | 28 | 3.6 | 3 | AK070486:Os04g0528300 | 28 | 3.6 | 4 | AK064945:Os04g0528300 | 28 | 3.6 | 5 | AK058387:Os04g0528300 | 28 | 3.6 | 6 | Os03g0308700:Os03g0308700 | 27 | 6.0 | 7 | AK109333:Os05g0358400 | 27 | 6.1 | 8 | AK071714:Os05g0358400 | 27 | 6.1 | 9 | Os07g0634900:Os07g0634900 | 27 | 8.0 | 10 | AK072452:Os10g0494300 | 27 | 8.0 | 11 | AK069910:Os01g0789100 | 27 | 8.0 | 12 | AK069195:Os04g0530600 | 27 | 8.0 |
|---|
>AK111211: | Length = 983 Score = 30.0 bits (66), Expect = 0.94 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 9/99 (9%) Frame = -2 Query: 462 SGINRLSTRT*IKRDIHRYSKSQLTSTLQHYYKNNSKSRERSTDVPNT---------RLD 310 S IN RT + H S SQ+ T+QHY + ++ VP T Sbjct: 807 SNINGFERRT----EEHHLSNSQMMQTIQHYEELLLHQSQQHMSVPTTPEGPLPGTSMSP 862 Query: 309 HGDEQAKRTEESEPSTVVATDAPCRGGRNTLSARLLYVS 193 H + T S S + +T R GR S+ L +S Sbjct: 863 HANTFTSFTFPSLNSHINSTPGSLRNGRGRSSSMLSNIS 901
>AK072126:Os03g0321500 | Length = 843 Score = 28.1 bits (61), Expect = 3.6 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 7/57 (12%) Frame = +2 Query: 8 PPESRSRSKNLPISLSH------SPTPSTI-AGRLHHHYTTE*ATPWMVLSPVALLP 157 PP R +S+NL S+SH SP PS + +GR ++ P M + +P Sbjct: 76 PPTIRQKSRNLSPSISHQASDSFSPVPSPLSSGRFRINHMKSGGNPVMTIEEKVPVP 132
>AK070486:Os04g0528300 | Length = 547 Score = 28.1 bits (61), Expect = 3.6 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +2 Query: 383 VDVSWDFEYRWISLLIYVLV 442 +++S DF Y W+ LLIY+LV Sbjct: 246 INMSRDFGYYWLRLLIYLLV 265
>AK064945:Os04g0528300 | Length = 711 Score = 28.1 bits (61), Expect = 3.6 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +2 Query: 383 VDVSWDFEYRWISLLIYVLV 442 +++S DF Y W+ LLIY+LV Sbjct: 410 INMSRDFGYYWLRLLIYLLV 429
>AK058387:Os04g0528300 | Length = 445 Score = 28.1 bits (61), Expect = 3.6 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +2 Query: 383 VDVSWDFEYRWISLLIYVLV 442 +++S DF Y W+ LLIY+LV Sbjct: 144 INMSRDFGYYWLRLLIYLLV 163
>Os03g0308700:Os03g0308700 | Length = 464 Score = 27.3 bits (59), Expect = 6.0 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -3 Query: 182 SPRWLTPRWGAVPPVTKPS 126 +P W P WGA PP +PS Sbjct: 401 APFWGAPFWGAQPPPPRPS 419
>AK109333:Os05g0358400 | Length = 308 Score = 27.3 bits (59), Expect = 6.1 Identities = 32/99 (32%), Positives = 39/99 (39%) Frame = +2 Query: 8 PPESRSRSKNLPISLSHSPTPSTIAGRLHHHYTTE*ATPWMVLSPVALLPSAELAT*GSM 187 PP + N P LSH PT A RLH + E + L +A PSA G Sbjct: 15 PPGAVRSKSNGPDRLSHLPTRPLSAPRLHLRRSPEPTHRRLPL--MASSPSAAATGSGGS 72 Query: 188 TIET*SNLADKVLRPPRQGASVATTVEGSDSSVRLACSS 304 E S + PR G V+ GS S R A S+ Sbjct: 73 FPEMNSVDDFAAVTAPRGGGRVSVVGFGSLLSERSARST 111
>AK071714:Os05g0358400 | Length = 308 Score = 27.3 bits (59), Expect = 6.1 Identities = 32/99 (32%), Positives = 39/99 (39%) Frame = +2 Query: 8 PPESRSRSKNLPISLSHSPTPSTIAGRLHHHYTTE*ATPWMVLSPVALLPSAELAT*GSM 187 PP + N P LSH PT A RLH + E + L +A PSA G Sbjct: 15 PPGAVRSKSNGPDRLSHLPTRPLSAPRLHLRRSPEPTHRRLPL--MASSPSAAATGSGGS 72 Query: 188 TIET*SNLADKVLRPPRQGASVATTVEGSDSSVRLACSS 304 E S + PR G V+ GS S R A S+ Sbjct: 73 FPEMNSVDDFAAVTAPRGGGRVSVVGFGSLLSERSARST 111
>Os07g0634900:Os07g0634900 | Length = 342 Score = 26.9 bits (58), Expect = 8.0 Identities = 17/57 (29%), Positives = 23/57 (40%) Frame = +2 Query: 2 VLPPESRSRSKNLPISLSHSPTPSTIAGRLHHHYTTE*ATPWMVLSPVALLPSAELA 172 V+P S S + N + LS P +T Y PW+ L P PS+ A Sbjct: 230 VIPSVSSSSTLNSMVGLS--PAATTTTTTTDEQYGNTNHLPWLELGPSTTTPSSSAA 284
>AK072452:Os10g0494300 | Length = 723 Score = 26.9 bits (58), Expect = 8.0 Identities = 9/20 (45%), Positives = 16/20 (80%) Frame = +2 Query: 383 VDVSWDFEYRWISLLIYVLV 442 +++S DF Y W+ L+IY++V Sbjct: 414 INMSRDFGYYWLRLIIYIVV 433
>AK069910:Os01g0789100 | Length = 329 Score = 26.9 bits (58), Expect = 8.0 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = +2 Query: 41 PISLSHSPTPSTIAGRLHHHYTTE*ATPWMVLSPVALL 154 P + SH+ P+ A HHH P + SP +L Sbjct: 36 PTAASHATAPAPFAAAAHHHVPIRSGGPLFLSSPPWML 73
>AK069195:Os04g0530600 | Length = 180 Score = 26.9 bits (58), Expect = 8.0 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%) Frame = +2 Query: 239 QGASVATTVEGSDSSVRL--ACSSPWSSLV 322 +GASV V+G D+S+++ S W SLV Sbjct: 58 RGASVVCAVQGQDTSIQVPEVTKSTWQSLV 87 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,244,595 Number of extensions: 347623 Number of successful extensions: 957 Number of sequences better than 10.0: 12 Number of HSP's gapped: 954 Number of HSP's successfully gapped: 12 Length of query: 174 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 80 Effective length of database: 11,636,001 Effective search space: 930880080 Effective search space used: 930880080 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
