ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf169n11 |
|---|---|
| Clone Library Name | barley_pub |
>Q6REY9:RHG20_RAT Rho GTPase-activating protein 20 - Rattus norvegicus (Rat)| Length = 1182 Score = 32.3 bits (72), Expect = 0.50 Identities = 19/69 (27%), Positives = 34/69 (49%) Frame = -2 Query: 263 QSNTRGNKHSDNAPSLSDRYQLISHMRCGYSRQYSKPR*MHGLAHQHIQQLSKPKPLPAQ 84 Q ++R ++ PS+ D+ +S++R YS++ SK GL H L + K L + Sbjct: 834 QKSSRAHRRCSE-PSIDDQNYKLSYLRGVYSKKQSKTSCEAGLLHGEEDYLKRHKSLQME 892 Query: 83 GNPFIGSAV 57 G I ++ Sbjct: 893 GQKLINQSL 901
>P14922:CYC8_YEAST Glucose repression mediator protein CYC8 - Saccharomyces cerevisiae| (Baker's yeast) Length = 966 Score = 29.6 bits (65), Expect = 3.3 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 8/94 (8%) Frame = -1 Query: 297 QTSQC--ENAQIRPIQHPRK-----QAF**CPIIIRQVSIDLTHAMRILTTVL*TTLNAR 139 Q+SQ + Q++ +QHP++ QA P+I V ++ R + + T ++A Sbjct: 638 QSSQLPPQQQQLQSVQHPQQLQGQPQAQAPQPLIQHNVEQNVLPQKRYMEGAIHTLVDAA 697 Query: 138 TSSSAHTAALETKTATSSRQSLHWI-SRLPRSGI 40 SSS HT S RQ H I ++ P +GI Sbjct: 698 VSSSTHT----ENNTKSPRQPTHAIPTQAPATGI 727
>Q63269:ITPR3_RAT Inositol 1,4,5-trisphosphate receptor type 3 - Rattus norvegicus| (Rat) Length = 2670 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = -2 Query: 293 HHNARMHKLGQSNTRGNKHSDNAPSLSDRYQLISHMRCGYSRQY 162 HH + +L Q GN H +N S RYQL R RQY Sbjct: 703 HHEKSVRQLAQEARAGNAHDENVLSYY-RYQLKLFARMCLDRQY 745
>P70227:ITPR3_MOUSE Inositol 1,4,5-trisphosphate receptor type 3 - Mus musculus (Mouse)| Length = 2670 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = -2 Query: 293 HHNARMHKLGQSNTRGNKHSDNAPSLSDRYQLISHMRCGYSRQY 162 HH + +L Q GN H +N S RYQL R RQY Sbjct: 703 HHEKSVRQLAQEARAGNAHDENVLSYY-RYQLKLFARMCLDRQY 745
>Q14573:ITPR3_HUMAN Inositol 1,4,5-trisphosphate receptor type 3 - Homo sapiens (Human)| Length = 2671 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = -2 Query: 293 HHNARMHKLGQSNTRGNKHSDNAPSLSDRYQLISHMRCGYSRQY 162 HH + +L Q GN H +N S RYQL R RQY Sbjct: 703 HHEKSVRQLAQEARAGNAHDENVLSYY-RYQLKLFARMCLDRQY 745
>Q8WN95:ITPR3_BOVIN Inositol 1,4,5-trisphosphate receptor type 3 - Bos taurus (Bovine)| Length = 2664 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = -2 Query: 293 HHNARMHKLGQSNTRGNKHSDNAPSLSDRYQLISHMRCGYSRQY 162 HH + +L Q GN H +N S RYQL R RQY Sbjct: 703 HHEKSVRQLAQEARAGNAHDENVLSYY-RYQLKLFARMCLDRQY 745
>Q6AYK6:CYBP_RAT Calcyclin-binding protein - Rattus norvegicus (Rat)| Length = 229 Score = 28.5 bits (62), Expect = 7.2 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +1 Query: 1 DEDMKRTIAKAWSDAR 48 D+DMKRTI KAW ++R Sbjct: 204 DDDMKRTINKAWVESR 219
>Q5R6Z8:CYBP_PONPY Calcyclin-binding protein - Pongo pygmaeus (Orangutan)| Length = 228 Score = 28.5 bits (62), Expect = 7.2 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +1 Query: 1 DEDMKRTIAKAWSDAR 48 D+DMKRTI KAW ++R Sbjct: 203 DDDMKRTINKAWVESR 218
>Q9CXW3:CYBP_MOUSE Calcyclin-binding protein - Mus musculus (Mouse)| Length = 229 Score = 28.5 bits (62), Expect = 7.2 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +1 Query: 1 DEDMKRTIAKAWSDAR 48 D+DMKRTI KAW ++R Sbjct: 204 DDDMKRTINKAWVESR 219
>Q4R4P3:CYBP_MACFA Calcyclin-binding protein - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 228 Score = 28.5 bits (62), Expect = 7.2 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +1 Query: 1 DEDMKRTIAKAWSDAR 48 D+DMKRTI KAW ++R Sbjct: 203 DDDMKRTINKAWVESR 218
>Q9HB71:CYBP_HUMAN Calcyclin-binding protein - Homo sapiens (Human)| Length = 228 Score = 28.5 bits (62), Expect = 7.2 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +1 Query: 1 DEDMKRTIAKAWSDAR 48 D+DMKRTI KAW ++R Sbjct: 203 DDDMKRTINKAWVESR 218
>Q3T168:CYBP_BOVIN Calcyclin-binding protein - Bos taurus (Bovine)| Length = 230 Score = 28.5 bits (62), Expect = 7.2 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +1 Query: 1 DEDMKRTIAKAWSDAR 48 D+DMKRTI KAW ++R Sbjct: 205 DDDMKRTINKAWVESR 220
>Q8EKS5:SYGA_SHEON Glycyl-tRNA synthetase alpha chain - Shewanella oneidensis| Length = 301 Score = 28.5 bits (62), Expect = 7.3 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -2 Query: 128 QHIQQLSKPKPLPAQGNPFIGSAVFPDLASDHALAI 21 QH+ L KP PLPA S F L + HA+++ Sbjct: 232 QHLLSLEKPLPLPAYEQVMKASHAFNLLDARHAISV 267
>Q9ZV53:ATL2C_ARATH Putative RING-H2 finger protein ATL2C - Arabidopsis thaliana| (Mouse-ear cress) Length = 423 Score = 28.1 bits (61), Expect = 9.5 Identities = 10/32 (31%), Positives = 22/32 (68%) Frame = -1 Query: 129 SAHTAALETKTATSSRQSLHWISRLPRSGIRP 34 S ++ +LETKT + +R+++HW++ ++P Sbjct: 387 SENSESLETKTPSFARRTMHWLAGRQNKIVQP 418 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 64,347,973 Number of extensions: 1372611 Number of successful extensions: 2731 Number of sequences better than 10.0: 14 Number of HSP's gapped: 2731 Number of HSP's successfully gapped: 14 Length of query: 119 Length of database: 100,686,439 Length adjustment: 87 Effective length of query: 32 Effective length of database: 76,822,774 Effective search space: 2458328768 Effective search space used: 2458328768 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
