ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf172k02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os02g0117200:Os02g0117200 140 3e-55
2Os12g0215900:Os12g0215900 29 3.6
3Os05g0416400:Os05g0416400 29 4.7

>Os02g0117200:Os02g0117200 |
          Length = 218
 Score =  140 bits (353), Expect(2) = 3e-55
 Identities = 77/121 (63%), Positives = 81/121 (66%), Gaps = 32/121 (26%)
 Frame = +3

Query: 177 DKCAACKAVAAELEIGISSEKPRNHLDLRNRLNSKGQREGKVIDYR-------------- 314
           DKCAACKAVAAELEIGISSEKPRNHLDLRNRLNSKGQREGK                   
Sbjct: 31  DKCAACKAVAAELEIGISSEKPRNHLDLRNRLNSKGQREGKCCRVSVTASSSTASSTPWP 90

Query: 315 ------------------VSELRIVELLDDLCDKMQDYTLQKSESGEKEWVKVANWSSFQ 440
                             VSELR+VELLD LCDKMQDYTLQK ESGEK WVKVA+W+SF+
Sbjct: 91  PPRSSRSRSPRSSTPTSPVSELRVVELLDGLCDKMQDYTLQKLESGEKGWVKVADWNSFK 150

Query: 441 T 443
           T
Sbjct: 151 T 151



 Score = 93.2 bits (230), Expect(2) = 3e-55
 Identities = 45/58 (77%), Positives = 49/58 (84%)
 Frame = +2

Query: 416 SSKLEQFSNWLLEETEDELAEWIKTSSAESGNVSQALCQDISKHCQSTSATAPVDDEL 589
           S  L  F   LLEETEDEL+EWIKTSSAESGNVS+ALC+DISKHCQSTSAT  +DDEL
Sbjct: 161 SKNLSSFCGRLLEETEDELSEWIKTSSAESGNVSRALCEDISKHCQSTSATIEIDDEL 218



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>Os12g0215900:Os12g0215900 |
          Length = 1617

 Score = 29.3 bits (64), Expect = 3.6
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +3

Query: 45   GDRDRRREGAMEPRRATRRRSG 110
            GD  RRR+GA   RRATR R G
Sbjct: 1517 GDGSRRRDGATGRRRATRDRHG 1538



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>Os05g0416400:Os05g0416400 |
          Length = 489

 Score = 28.9 bits (63), Expect = 4.7
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 413 ESSKLEQFSNWLLEETEDELAEWIKTSSAESGNVSQALCQDISKHC 550
           ++SKL    N +++E ED  A+W +    +  +  + L   IS HC
Sbjct: 146 KTSKLRNHVNSMVQEVEDYFAKWGENGIVDIKHEFEKLLMLISGHC 191


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 19,898,638
Number of extensions: 397464
Number of successful extensions: 1231
Number of sequences better than 10.0: 3
Number of HSP's gapped: 1230
Number of HSP's successfully gapped: 5
Length of query: 280
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 181
Effective length of database: 11,435,796
Effective search space: 2069879076
Effective search space used: 2069879076
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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