| Clone Name | FLbaf172k02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os02g0117200:Os02g0117200 | 140 | 3e-55 | 2 | Os12g0215900:Os12g0215900 | 29 | 3.6 | 3 | Os05g0416400:Os05g0416400 | 29 | 4.7 |
|---|
>Os02g0117200:Os02g0117200 | Length = 218 Score = 140 bits (353), Expect(2) = 3e-55 Identities = 77/121 (63%), Positives = 81/121 (66%), Gaps = 32/121 (26%) Frame = +3 Query: 177 DKCAACKAVAAELEIGISSEKPRNHLDLRNRLNSKGQREGKVIDYR-------------- 314 DKCAACKAVAAELEIGISSEKPRNHLDLRNRLNSKGQREGK Sbjct: 31 DKCAACKAVAAELEIGISSEKPRNHLDLRNRLNSKGQREGKCCRVSVTASSSTASSTPWP 90 Query: 315 ------------------VSELRIVELLDDLCDKMQDYTLQKSESGEKEWVKVANWSSFQ 440 VSELR+VELLD LCDKMQDYTLQK ESGEK WVKVA+W+SF+ Sbjct: 91 PPRSSRSRSPRSSTPTSPVSELRVVELLDGLCDKMQDYTLQKLESGEKGWVKVADWNSFK 150 Query: 441 T 443 T Sbjct: 151 T 151 Score = 93.2 bits (230), Expect(2) = 3e-55 Identities = 45/58 (77%), Positives = 49/58 (84%) Frame = +2 Query: 416 SSKLEQFSNWLLEETEDELAEWIKTSSAESGNVSQALCQDISKHCQSTSATAPVDDEL 589 S L F LLEETEDEL+EWIKTSSAESGNVS+ALC+DISKHCQSTSAT +DDEL Sbjct: 161 SKNLSSFCGRLLEETEDELSEWIKTSSAESGNVSRALCEDISKHCQSTSATIEIDDEL 218
>Os12g0215900:Os12g0215900 | Length = 1617 Score = 29.3 bits (64), Expect = 3.6 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +3 Query: 45 GDRDRRREGAMEPRRATRRRSG 110 GD RRR+GA RRATR R G Sbjct: 1517 GDGSRRRDGATGRRRATRDRHG 1538
>Os05g0416400:Os05g0416400 | Length = 489 Score = 28.9 bits (63), Expect = 4.7 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = +2 Query: 413 ESSKLEQFSNWLLEETEDELAEWIKTSSAESGNVSQALCQDISKHC 550 ++SKL N +++E ED A+W + + + + L IS HC Sbjct: 146 KTSKLRNHVNSMVQEVEDYFAKWGENGIVDIKHEFEKLLMLISGHC 191 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 19,898,638 Number of extensions: 397464 Number of successful extensions: 1231 Number of sequences better than 10.0: 3 Number of HSP's gapped: 1230 Number of HSP's successfully gapped: 5 Length of query: 280 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 181 Effective length of database: 11,435,796 Effective search space: 2069879076 Effective search space used: 2069879076 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)