>P53226:BUD9_YEAST Bud site selection protein 9 - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 547
 Score = 37.0 bits (84), Expect = 0.35
 Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 9/155 (5%)
 Frame = +3

Query: 597  HQGSYKTEDNCFLPATRSGREMKMAKKTGVD--KPLVQYRRVGGTHERNA-------IPK 749
            ++ + +T+     P+ R G ++    +  VD  K  V    + GT    A       IPK
Sbjct: 221  NKSTRQTQGTYSFPSMRYGVDLVSPVEGAVDVAKSRVPNSTLNGTFPDKAFIPHEFQIPK 280

Query: 750  QVWERMDTRKKTGLHDTDNISVSVDNVEPPKSVECDTSGFEKADTGPEPLGQASERSTDV 929
            + W R+   K T L    N S+ +D ++P          FE AD   +      +RS+  
Sbjct: 281  KAWNRIPANKSTSLKTPRNHSLLIDILKP----------FEAADLAND------QRSSSA 324

Query: 930  YKSETDQSYGQHEENQSACSDGTTITNKQKCKSTN 1034
                T  S GQ+  N +  + GT + + Q+ K+TN
Sbjct: 325  VLKNTVHSNGQY--NPTNETSGTRMQD-QRQKNTN 356

>Q7TSA0:MIRO2_RAT Mitochondrial Rho GTPase 2 - Rattus norvegicus (Rat)|
          Length = 622

 Score = 35.8 bits (81), Expect = 0.79
 Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
 Frame = +3

Query: 1431 CAAPTNGYFQYGQQPNFFSG-----PVGFRVPGNVPADFPVQYNNVHRYPAPA-FSCIHP 1592
            CA     Y+  GQ P  F       P G   PG  PA+F  +    HR PAPA FSC+ P
Sbjct: 508  CATIYKRYYMDGQTPCLFISSKADLPEGVAPPGLSPAEFCRR----HRLPAPASFSCLGP 563

Query: 1593 EQ 1598
             Q
Sbjct: 564  AQ 565

>Q8JZN7:MIRO2_MOUSE Mitochondrial Rho GTPase 2 - Mus musculus (Mouse)|
          Length = 620

 Score = 34.3 bits (77), Expect = 2.3
 Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
 Frame = +3

Query: 1431 CAAPTNGYFQYGQQPNFFSG-----PVGFRVPGNVPADFPVQYNNVHRYPAPA-FSCIHP 1592
            CA     Y+  GQ P  F       P G   PG  PA+F  +    HR PAPA FSC+ P
Sbjct: 506  CATIYKRYYMDGQTPCLFIASKADLPEGVAPPGLSPAEFCRR----HRLPAPASFSCLGP 561

>Q8VIG0:ZCH14_MOUSE Zinc finger CCHC domain-containing protein 14 - Mus musculus (Mouse)|
          Length = 956

 Score = 33.9 bits (76), Expect = 3.0
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 10/104 (9%)
 Frame = +3

Query: 1293 HPKATCPPRNDRFGFSTL------PFQNQSLHQQNMHAPAYSPTTIGPHSHA---CAAPT 1445
            +P+      N +  FS +      P Q       N  +P+  P+T      +   C AP+
Sbjct: 678  NPRTALYTANTKVAFSAVSSVPVGPLQGSFCANSNTASPSSHPSTSFASMASLPSCPAPS 737

Query: 1446 NG-YFQYGQQPNFFSGPVGFRVPGNVPADFPVQYNNVHRYPAPA 1574
            +        + +F+SG  G   PGN+PA     +++ H    PA
Sbjct: 738  SSPALSSVPESSFYSGGAGSSSPGNIPASSQSHHHHHHHQQPPA 781

>Q6C1V6:CWC25_YARLI Pre-mRNA-splicing factor CWC25 - Yarrowia lipolytica (Candida|
            lipolytica)
          Length = 561

 Score = 33.9 bits (76), Expect = 3.0
 Identities = 46/221 (20%), Positives = 85/221 (38%), Gaps = 3/221 (1%)
 Frame = +3

Query: 408  RKDVPQDHSSCWYDDGRDESRSAGNLQWRSMERMRNGDGGCNSVCSTNNRTRYRQDYNSC 587
            R++  +D S    DD R   +S+   + R   R   G     S      R R R+ Y   
Sbjct: 217  RRERNRDPSPSVSDDDRGYRQSSREERDRKSSREEGG----RSRSRDRYRNRSRERYRDR 272

Query: 588  SCDHQGSYKTEDNCFLPATRSGREMKMAKKTGVDKPLVQYRRVGGTHERNAIPKQVWERM 767
            S + +   ++ +      +R  R+    +    D+     +  G +  R+++        
Sbjct: 273  SREERSRDRSRERL---RSRRDRDRDRDRDRDRDRDRDNVQSSGRSSGRSSVRSSARSER 329

Query: 768  DTRKKTGLHDTDNISVSVDNVEPPKSVECDTSGFEKADTGPEPLGQAS---ERSTDVYKS 938
              R ++   D D      D     +S E D+ G + +D   E     S   ERSTD+  S
Sbjct: 330  SLRDRSRSRDPDR-----DRDYRSRSRERDSGGGQGSDLSDEVGNGRSVLDERSTDMNAS 384

Query: 939  ETDQSYGQHEENQSACSDGTTITNKQKCKSTNNEGSKPDEE 1061
            + + S+G   +N+ + S  + +T   + K  +      DE+
Sbjct: 385  DGNSSHGYRADNEFSPS-RSPVTRSHRDKRNSYRPEYKDED 424

>P56695:WFS1_MOUSE Wolframin - Mus musculus (Mouse)|
          Length = 890

 Score = 33.5 bits (75), Expect = 3.9
 Identities = 22/66 (33%), Positives = 28/66 (42%)
 Frame = +3

Query: 1731 PMEPKDAPDGNKLADRSASFSLFQFNLPIAPQGQPSPKDGKSGESVARMPPFAPVQAQPC 1910
            P  P   P      + +AS    +   P AP+ Q  P  G+S    A   P AP   Q  
Sbjct: 14   PPPPAPQPQARARLNATASLEQDKIEPPRAPRPQADPSAGRSAGEAAAPEPRAP---QTG 70

Query: 1911 SREQTD 1928
            SRE+TD
Sbjct: 71   SREETD 76

>Q8BP27:CJ078_MOUSE Uncharacterized protein C10orf78 homolog - Mus musculus (Mouse)|
          Length = 319

 Score = 33.1 bits (74), Expect = 5.1
 Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 1/138 (0%)
 Frame = +3

Query: 342 PPISSEPFTSQQPKPSRRNLRLRKDVPQDHSSCWYDDGRDESRSAGNLQWRSMERMRNGD 521
           PP  S P +   P+P       R++ P  HS+         S     L     ER++   
Sbjct: 97  PP--SPPTSPAAPQP-------RENPPSPHSN---------SSGKQPLSGTPKERLKKAR 138

Query: 522 GGCNSVCSTNNRTRYRQDYNSCSCDHQGSYKTEDNCF-LPATRSGREMKMAKKTGVDKPL 698
              +S CS   R +   D N+ +    G    E+NC     +   ++ +  +K+  +K  
Sbjct: 139 SSSHSFCSVVKRMKVENDENNETLSEPGESSKEENCSKAQESLKNKDSEPGEKSSEEKNT 198

Query: 699 VQYRRVGGTHERNAIPKQ 752
            +  +   T   NA+PK+
Sbjct: 199 CE-SKSSDTGSSNALPKE 215

>Q39079:DNJ13_ARATH Chaperone protein dnaJ 13 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 538

 Score = 32.3 bits (72), Expect = 8.7
 Identities = 20/76 (26%), Positives = 36/76 (47%)
 Frame = +3

Query: 660 MKMAKKTGVDKPLVQYRRVGGTHERNAIPKQVWERMDTRKKTGLHDTDNISVSVDNVEPP 839
           +K  K+  ++     + +VG    R    +Q+ + + TRKK    +TD + V+      P
Sbjct: 392 LKREKQKALENMEKTWGQVGEARARAEKAQQLLQTVATRKKNRQVETDGLIVTKALYGDP 451

Query: 840 KSVECDTSGFEKADTG 887
           K++E    G E  D+G
Sbjct: 452 KAIERRNEGVEGLDSG 467

>Q8VII6:CTL1_RAT Choline transporter-like protein 1 - Rattus norvegicus (Rat)|
          Length = 656

 Score = 32.3 bits (72), Expect = 8.7
 Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
 Frame = -3

Query: 954 MTDLFLIYKHQWTFQKPGLVVQVLCQPFQ-IHWYHTP-LIWVARH---CQLILIC---YL 799
           MT LFL         + G V   +  P Q + WYH   LIW++     CQ + +      
Sbjct: 353 MTLLFLGTTGSAVQNEQGFVEYKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVT 412

Query: 798 YHVSQSSSGYPFSPILVSELHFSRVYRQPGGTAPK 694
           Y+ ++     PF+PIL S    +R+ R   GT  K
Sbjct: 413 YYFTRDKRNLPFTPILAS---VNRLIRYHLGTVAK 444


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 391,140,107
Number of extensions: 8970020
Number of successful extensions: 24618
Number of sequences better than 10.0: 9
Number of HSP's gapped: 24580
Number of HSP's successfully gapped: 9
Length of query: 753
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 632
Effective length of database: 67,496,744
Effective search space: 42657942208
Effective search space used: 42657942208
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)