ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf169j16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001055975.1| Oryza sativa (japonica cultivar-group) Os03g... 214 1e-51
2gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome... 214 1e-51
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 214 1e-51
4dbj|AK121288.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 1e-51
5dbj|AK069173.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 1e-51
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 113 3e-21
7dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic D... 113 3e-21
8gb|AY105793.1| Zea mays PCO117628 mRNA sequence 66 6e-07
9gb|AY104349.1| Zea mays PCO090380 mRNA sequence 56 6e-04
10ref|NM_001070559.1| Oryza sativa (japonica cultivar-group) Os10g... 54 0.002
11gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome... 54 0.002
12gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 54 0.002
13dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 54 0.002
14dbj|AK103627.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 0.002
15dbj|AK072495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 0.002
16ref|NM_106030.1| Arabidopsis thaliana unknown protein (AT1G73710... 46 0.55
17emb|AL611944.10| Mouse DNA sequence from clone RP23-279E14 on ch... 46 0.55
18gb|AC012679.5|AC012679 Arabidopsis thaliana chromosome 1 BAC F25... 46 0.55
19gb|AY205606.1| Glycine max cultivar Williams 82 SIRE1-2 retroele... 44 2.2
20gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's H... 44 2.2
21dbj|AK030980.1| Mus musculus adult male thymus cDNA, RIKEN full-... 44 2.2
22gb|AC105347.4| Homo sapiens BAC clone RP11-719M16 from 4, comple... 44 2.2
23gb|AC010238.6| Homo sapiens chromosome 5 clone CTC-349C3, comple... 44 2.2
24gb|AC154828.2| Mus musculus BAC clone RP24-549A19 from 13, compl... 44 2.2
25emb|AL133316.5|CNS01DUR Human chromosome 14 DNA sequence Partial... 44 2.2
26emb|AL132716.6|CNS01DTF Human chromosome 14 DNA sequence BAC R-1... 44 2.2
27gb|AC174379.16| Medicago truncatula chromosome 8 clone mth2-57p1... 42 8.7
28gb|AC186174.2| Gallus gallus BAC clone CH261-92O14 from chromoso... 42 8.7
29gb|CP000383.1| Cytophaga hutchinsonii ATCC 33406, complete genome 42 8.7
30dbj|AB000298.1| Human astrovirus 1 gene for outer capsid protein... 42 8.7
31dbj|AB000297.1| Human astrovirus 1 gene for outer capsid protein... 42 8.7
32emb|BX005017.13| Zebrafish DNA sequence from clone DKEY-200P10 i... 42 8.7
33gb|AC102469.7| Mus musculus chromosome 1, clone RP24-356O3, comp... 42 8.7
34gb|AC120877.15| Mus musculus chromosome 6, clone RP24-548D19, co... 42 8.7
35gb|AC159332.11| Mus musculus 6 BAC RP23-413D8 (Roswell Park Canc... 42 8.7
36gb|AC163636.5| Mus musculus BAC clone RP24-499E13 from chromosom... 42 8.7
37gb|AC004931.1| Homo sapiens PAC clone RP5-922I23 from 7, complet... 42 8.7
38gb|AC124477.4| Mus musculus BAC clone RP24-103A12 from chromosom... 42 8.7
39gb|AC122266.2| Mus musculus BAC clone RP23-213K18 from 8, comple... 42 8.7
40gb|AC117254.3| Mus musculus BAC clone RP24-418D1 from 6, complet... 42 8.7
41gb|AC115721.11| Mus musculus chromosome 3, clone RP23-9P8, compl... 42 8.7
42gb|AC160549.5| Mus musculus chromosome 3, clone RP23-276K18, com... 42 8.7
43gb|AC158362.5| Mus musculus BAC clone RP23-214K5 from chromosome... 42 8.7
44gb|AC025593.6| Homo sapiens chromosome 7 clone RP11-18L16, compl... 42 8.7
45dbj|AK075382.1| Homo sapiens cDNA PSEC0072 fis, clone NT2RP20024... 42 8.7
46gb|DQ085871.1| HIV-1 isolate BREPM11948 from Brazil, complete ge... 42 8.7
47ref|XM_747093.1| Aspergillus fumigatus Af293 sterol carrier prot... 42 8.7
48ref|NM_017306.3| Rattus norvegicus dodecenoyl-coenzyme A delta i... 42 8.7
49gb|AC154838.2| Mus musculus BAC clone RP23-64F2 from chromosome ... 42 8.7
50gb|AC008265.15|AC008265 Homo sapiens chromosome 7 clone RP11-256... 42 8.7
51emb|Y08633.1|HASCAPU1 Human astrovirus gene encoding capsid prot... 42 8.7
52gb|BC078705.1| Rattus norvegicus dodecenoyl-coenzyme A delta iso... 42 8.7
53gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, comp... 42 8.7
54gb|AC162941.5| Mus musculus BAC clone RP23-78N5 from chromosome ... 42 8.7
55gb|DQ155665.1| Didelphis virginiana Na+-dependent neutral amino ... 42 8.7
56emb|X61184.1|RNTEISOM Rat mRNA for mitochondrial 3-2trans-enoyl-... 42 8.7
57gb|AC154519.2| Mus musculus BAC clone RP23-216L13 from chromosom... 42 8.7
58dbj|AB037274.1| Human astrovirus type 5 gene for capsid protein ... 42 8.7
59dbj|AB037273.1| Human astrovirus type 5 gene for capsid protein ... 42 8.7
60gb|U15136.1|HAU15136 Human astrovirus type 5 major capsid protei... 42 8.7
61gb|M61112.1|RATD2D3COA Rat delta-3,delta-2-enoyl-CoA isomerase m... 42 8.7
62emb|AL512356.6|CNS07EF5 Human chromosome 14 DNA sequence BAC R-4... 42 8.7 
>ref|NM_001055975.1| Oryza sativa (japonica cultivar-group) Os03g0226600 (Os03g0226600)
            mRNA, complete cds
          Length = 4019
 Score =  214 bits (108), Expect = 1e-51
 Identities = 237/280 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1026 tcaacaaataatgaaggttctaagccagacgaagagctgatgacgaactctgtcagttct 1085
            ||||||||  |||||||||||  ||  || ||||||||||||| |||||||  |||||||
Sbjct: 2830 tcaacaaaagatgaaggttctgggcatgatgaagagctgatgatgaactctaccagttct 2889

                                                                        
Query: 1086 gatggctcatcttcttgtatgagcgaggcagatagagaaagcagttcaagcagtgtgacg 1145
            |||||||  ||||| |||| ||| || |||||||||||||||||  ||||||||||||| 
Sbjct: 2890 gatggcttgtcttcatgtacgagtgaagcagatagagaaagcagcacaagcagtgtgact 2949

                                                                        
Query: 1146 tctttgagcgctcgtactccagaatcatcatcatctgactcagaggaatcttcggagaga 1205
            |||||||||||||    || ||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 2950 tctttgagcgctcaacatcaagaatcatcatcatctgactctgaggaatctccagagaga 3009

                                                                        
Query: 1206 gtcaacagaattacagaagctccatcaacaagaactgcttcacgttctttatttgagacg 1265
            |||||||| ||    ||||||||||||||||  || | |||||| || ||| ||||| | 
Sbjct: 3010 gtcaacagcatcgaggaagctccatcaacaaagaccgtttcacggtccttacttgaggct 3069

                                                    
Query: 1266 tgtgcaggaaatggtttcagagaataccacccaaaagcca 1305
            ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 3070 tgtgcaggaaaaggtttcagagaataccaaccaaaagcca 3109



 Score = 71.9 bits (36), Expect = 1e-08
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1781 tgcatccttctcattgttccaattcaacctgccgatagctccgcaaggccaaccgtcacc 1840
            |||||||||||| |||||||||||||||||||| |||||||| |  | || ||| ||| |
Sbjct: 3588 tgcatccttctcgttgttccaattcaacctgccaatagctccccctgccccaccatcatc 3647

                                    
Query: 1841 caaagatggtaagagtggagagtc 1864
            ||||||||  | ||||||||||||
Sbjct: 3648 caaagatgacacgagtggagagtc 3671



 Score = 67.9 bits (34), Expect = 2e-07
 Identities = 193/246 (78%)
 Strand = Plus / Plus

                                                                        
Query: 350  tagcagtgaacctttcacatcccagcaaccaaaaccatcacgaagaaatctgaggttgag 409
            ||||||||| | |||||||||    ||| ||||| ||||| || | ||||||||| ||||
Sbjct: 2112 tagcagtgaccttttcacatctggacaatcaaaatcatcaagatggaatctgaggctgag 2171

                                                                        
Query: 410  aaaggacgttcctcaagatcactcctcttgttggtatgatgatggccgagatgaatctag 469
            ||| ||  | ||||||||||| ||||||||||| ||||||||  || ||||||||  | |
Sbjct: 2172 aaaagatttccctcaagatcagtcctcttgttgctatgatgagtgcggagatgaaaatgg 2231

                                                                        
Query: 470  aagtgctggcaatctgcagtggcgatcaatggaaaggatgagaaatggtgatgggggttg 529
            |||   |||  || | ||||||| ||||| ||||||||  ||| || |||   |  ||||
Sbjct: 2232 aagcattggtgattttcagtggcaatcaaaggaaaggacaagacatagtgcccgaagttg 2291

                                                                        
Query: 530  taactcggtgtgtagtacaaataacagaacaagatataggcaagactacaattcttgcag 589
            |||||| |||| || ||||||||||||||||||  |||| ||  |||||| ||| | |||
Sbjct: 2292 taactcagtgtttactacaaataacagaacaagggatagacacaactacatttccttcag 2351

                  
Query: 590  ctgtga 595
            ||||||
Sbjct: 2352 ctgtga 2357



 Score = 65.9 bits (33), Expect = 6e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                     
Query: 1525 ctgatttcccagtgcaatacaacaatgtacatcgctacccagctcctgcttttagtt 1581
            ||||||| |||||||| |||| |||||| |||| || ||||||||||||||||||||
Sbjct: 3329 ctgattttccagtgcagtacagcaatgttcatcacttcccagctcctgcttttagtt 3385



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                        
Query: 640  caactagatcaggtagggagatgaagatggcaaagaaaacaggtgttgataagcctttgg 699
            ||||| |||||||||||||||  ||||||||||  |||||||| ||||| |  |||  ||
Sbjct: 2402 caactggatcaggtagggagacaaagatggcaagaaaaacaggagttgagagacctaggg 2461

                       
Query: 700  tgcagtaccgc 710
            |||||||||||
Sbjct: 2462 tgcagtaccgc 2472



 Score = 52.0 bits (26), Expect = 0.009
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                          
Query: 220  cagctagtgaagaggaagataattccacag 249
            ||||||||||||| ||||||||||||||||
Sbjct: 1970 cagctagtgaagaagaagataattccacag 1999
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>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05,
            complete sequence
          Length = 127946

 Score =  214 bits (108), Expect = 1e-51
 Identities = 237/280 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1026 tcaacaaataatgaaggttctaagccagacgaagagctgatgacgaactctgtcagttct 1085
            ||||||||  |||||||||||  ||  || ||||||||||||| |||||||  |||||||
Sbjct: 6558 tcaacaaaagatgaaggttctgggcatgatgaagagctgatgatgaactctaccagttct 6617

                                                                        
Query: 1086 gatggctcatcttcttgtatgagcgaggcagatagagaaagcagttcaagcagtgtgacg 1145
            |||||||  ||||| |||| ||| || |||||||||||||||||  ||||||||||||| 
Sbjct: 6618 gatggcttgtcttcatgtacgagtgaagcagatagagaaagcagcacaagcagtgtgact 6677

                                                                        
Query: 1146 tctttgagcgctcgtactccagaatcatcatcatctgactcagaggaatcttcggagaga 1205
            |||||||||||||    || ||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 6678 tctttgagcgctcaacatcaagaatcatcatcatctgactctgaggaatctccagagaga 6737

                                                                        
Query: 1206 gtcaacagaattacagaagctccatcaacaagaactgcttcacgttctttatttgagacg 1265
            |||||||| ||    ||||||||||||||||  || | |||||| || ||| ||||| | 
Sbjct: 6738 gtcaacagcatcgaggaagctccatcaacaaagaccgtttcacggtccttacttgaggct 6797

                                                    
Query: 1266 tgtgcaggaaatggtttcagagaataccacccaaaagcca 1305
            ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 6798 tgtgcaggaaaaggtttcagagaataccaaccaaaagcca 6837



 Score = 71.9 bits (36), Expect = 1e-08
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1781 tgcatccttctcattgttccaattcaacctgccgatagctccgcaaggccaaccgtcacc 1840
            |||||||||||| |||||||||||||||||||| |||||||| |  | || ||| ||| |
Sbjct: 7316 tgcatccttctcgttgttccaattcaacctgccaatagctccccctgccccaccatcatc 7375

                                    
Query: 1841 caaagatggtaagagtggagagtc 1864
            ||||||||  | ||||||||||||
Sbjct: 7376 caaagatgacacgagtggagagtc 7399



 Score = 67.9 bits (34), Expect = 2e-07
 Identities = 193/246 (78%)
 Strand = Plus / Plus

                                                                        
Query: 350  tagcagtgaacctttcacatcccagcaaccaaaaccatcacgaagaaatctgaggttgag 409
            ||||||||| | |||||||||    ||| ||||| ||||| || | ||||||||| ||||
Sbjct: 5840 tagcagtgaccttttcacatctggacaatcaaaatcatcaagatggaatctgaggctgag 5899

                                                                        
Query: 410  aaaggacgttcctcaagatcactcctcttgttggtatgatgatggccgagatgaatctag 469
            ||| ||  | ||||||||||| ||||||||||| ||||||||  || ||||||||  | |
Sbjct: 5900 aaaagatttccctcaagatcagtcctcttgttgctatgatgagtgcggagatgaaaatgg 5959

                                                                        
Query: 470  aagtgctggcaatctgcagtggcgatcaatggaaaggatgagaaatggtgatgggggttg 529
            |||   |||  || | ||||||| ||||| ||||||||  ||| || |||   |  ||||
Sbjct: 5960 aagcattggtgattttcagtggcaatcaaaggaaaggacaagacatagtgcccgaagttg 6019

                                                                        
Query: 530  taactcggtgtgtagtacaaataacagaacaagatataggcaagactacaattcttgcag 589
            |||||| |||| || ||||||||||||||||||  |||| ||  |||||| ||| | |||
Sbjct: 6020 taactcagtgtttactacaaataacagaacaagggatagacacaactacatttccttcag 6079

                  
Query: 590  ctgtga 595
            ||||||
Sbjct: 6080 ctgtga 6085



 Score = 65.9 bits (33), Expect = 6e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                     
Query: 1525 ctgatttcccagtgcaatacaacaatgtacatcgctacccagctcctgcttttagtt 1581
            ||||||| |||||||| |||| |||||| |||| || ||||||||||||||||||||
Sbjct: 7057 ctgattttccagtgcagtacagcaatgttcatcacttcccagctcctgcttttagtt 7113



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                        
Query: 640  caactagatcaggtagggagatgaagatggcaaagaaaacaggtgttgataagcctttgg 699
            ||||| |||||||||||||||  ||||||||||  |||||||| ||||| |  |||  ||
Sbjct: 6130 caactggatcaggtagggagacaaagatggcaagaaaaacaggagttgagagacctaggg 6189

                       
Query: 700  tgcagtaccgc 710
            |||||||||||
Sbjct: 6190 tgcagtaccgc 6200



 Score = 52.0 bits (26), Expect = 0.009
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                          
Query: 220  cagctagtgaagaggaagataattccacag 249
            ||||||||||||| ||||||||||||||||
Sbjct: 5698 cagctagtgaagaagaagataattccacag 5727
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  214 bits (108), Expect = 1e-51
 Identities = 237/280 (84%)
 Strand = Plus / Plus

                                                                           
Query: 1026    tcaacaaataatgaaggttctaagccagacgaagagctgatgacgaactctgtcagttct 1085
               ||||||||  |||||||||||  ||  || ||||||||||||| |||||||  |||||||
Sbjct: 6620223 tcaacaaaagatgaaggttctgggcatgatgaagagctgatgatgaactctaccagttct 6620282

                                                                           
Query: 1086    gatggctcatcttcttgtatgagcgaggcagatagagaaagcagttcaagcagtgtgacg 1145
               |||||||  ||||| |||| ||| || |||||||||||||||||  ||||||||||||| 
Sbjct: 6620283 gatggcttgtcttcatgtacgagtgaagcagatagagaaagcagcacaagcagtgtgact 6620342

                                                                           
Query: 1146    tctttgagcgctcgtactccagaatcatcatcatctgactcagaggaatcttcggagaga 1205
               |||||||||||||    || ||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 6620343 tctttgagcgctcaacatcaagaatcatcatcatctgactctgaggaatctccagagaga 6620402

                                                                           
Query: 1206    gtcaacagaattacagaagctccatcaacaagaactgcttcacgttctttatttgagacg 1265
               |||||||| ||    ||||||||||||||||  || | |||||| || ||| ||||| | 
Sbjct: 6620403 gtcaacagcatcgaggaagctccatcaacaaagaccgtttcacggtccttacttgaggct 6620462

                                                       
Query: 1266    tgtgcaggaaatggtttcagagaataccacccaaaagcca 1305
               ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 6620463 tgtgcaggaaaaggtttcagagaataccaaccaaaagcca 6620502



 Score = 71.9 bits (36), Expect = 1e-08
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                           
Query: 1781    tgcatccttctcattgttccaattcaacctgccgatagctccgcaaggccaaccgtcacc 1840
               |||||||||||| |||||||||||||||||||| |||||||| |  | || ||| ||| |
Sbjct: 6620981 tgcatccttctcgttgttccaattcaacctgccaatagctccccctgccccaccatcatc 6621040

                                       
Query: 1841    caaagatggtaagagtggagagtc 1864
               ||||||||  | ||||||||||||
Sbjct: 6621041 caaagatgacacgagtggagagtc 6621064



 Score = 67.9 bits (34), Expect = 2e-07
 Identities = 193/246 (78%)
 Strand = Plus / Plus

                                                                           
Query: 350     tagcagtgaacctttcacatcccagcaaccaaaaccatcacgaagaaatctgaggttgag 409
               ||||||||| | |||||||||    ||| ||||| ||||| || | ||||||||| ||||
Sbjct: 6619505 tagcagtgaccttttcacatctggacaatcaaaatcatcaagatggaatctgaggctgag 6619564

                                                                           
Query: 410     aaaggacgttcctcaagatcactcctcttgttggtatgatgatggccgagatgaatctag 469
               ||| ||  | ||||||||||| ||||||||||| ||||||||  || ||||||||  | |
Sbjct: 6619565 aaaagatttccctcaagatcagtcctcttgttgctatgatgagtgcggagatgaaaatgg 6619624

                                                                           
Query: 470     aagtgctggcaatctgcagtggcgatcaatggaaaggatgagaaatggtgatgggggttg 529
               |||   |||  || | ||||||| ||||| ||||||||  ||| || |||   |  ||||
Sbjct: 6619625 aagcattggtgattttcagtggcaatcaaaggaaaggacaagacatagtgcccgaagttg 6619684

                                                                           
Query: 530     taactcggtgtgtagtacaaataacagaacaagatataggcaagactacaattcttgcag 589
               |||||| |||| || ||||||||||||||||||  |||| ||  |||||| ||| | |||
Sbjct: 6619685 taactcagtgtttactacaaataacagaacaagggatagacacaactacatttccttcag 6619744

                     
Query: 590     ctgtga 595
               ||||||
Sbjct: 6619745 ctgtga 6619750



 Score = 65.9 bits (33), Expect = 6e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1525    ctgatttcccagtgcaatacaacaatgtacatcgctacccagctcctgcttttagtt 1581
               ||||||| |||||||| |||| |||||| |||| || ||||||||||||||||||||
Sbjct: 6620722 ctgattttccagtgcagtacagcaatgttcatcacttcccagctcctgcttttagtt 6620778



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                           
Query: 640     caactagatcaggtagggagatgaagatggcaaagaaaacaggtgttgataagcctttgg 699
               ||||| |||||||||||||||  ||||||||||  |||||||| ||||| |  |||  ||
Sbjct: 6619795 caactggatcaggtagggagacaaagatggcaagaaaaacaggagttgagagacctaggg 6619854

                          
Query: 700     tgcagtaccgc 710
               |||||||||||
Sbjct: 6619855 tgcagtaccgc 6619865



 Score = 52.0 bits (26), Expect = 0.009
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                             
Query: 220     cagctagtgaagaggaagataattccacag 249
               ||||||||||||| ||||||||||||||||
Sbjct: 6619363 cagctagtgaagaagaagataattccacag 6619392
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>dbj|AK121288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109B15, full
            insert sequence
          Length = 4741

 Score =  214 bits (108), Expect = 1e-51
 Identities = 237/280 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1026 tcaacaaataatgaaggttctaagccagacgaagagctgatgacgaactctgtcagttct 1085
            ||||||||  |||||||||||  ||  || ||||||||||||| |||||||  |||||||
Sbjct: 3550 tcaacaaaagatgaaggttctgggcatgatgaagagctgatgatgaactctaccagttct 3609

                                                                        
Query: 1086 gatggctcatcttcttgtatgagcgaggcagatagagaaagcagttcaagcagtgtgacg 1145
            |||||||  ||||| |||| ||| || |||||||||||||||||  ||||||||||||| 
Sbjct: 3610 gatggcttgtcttcatgtacgagtgaagcagatagagaaagcagcacaagcagtgtgact 3669

                                                                        
Query: 1146 tctttgagcgctcgtactccagaatcatcatcatctgactcagaggaatcttcggagaga 1205
            |||||||||||||    || ||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 3670 tctttgagcgctcaacatcaagaatcatcatcatctgactctgaggaatctccagagaga 3729

                                                                        
Query: 1206 gtcaacagaattacagaagctccatcaacaagaactgcttcacgttctttatttgagacg 1265
            |||||||| ||    ||||||||||||||||  || | |||||| || ||| ||||| | 
Sbjct: 3730 gtcaacagcatcgaggaagctccatcaacaaagaccgtttcacggtccttacttgaggct 3789

                                                    
Query: 1266 tgtgcaggaaatggtttcagagaataccacccaaaagcca 1305
            ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 3790 tgtgcaggaaaaggtttcagagaataccaaccaaaagcca 3829



 Score = 71.9 bits (36), Expect = 1e-08
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1781 tgcatccttctcattgttccaattcaacctgccgatagctccgcaaggccaaccgtcacc 1840
            |||||||||||| |||||||||||||||||||| |||||||| |  | || ||| ||| |
Sbjct: 4308 tgcatccttctcgttgttccaattcaacctgccaatagctccccctgccccaccatcatc 4367

                                    
Query: 1841 caaagatggtaagagtggagagtc 1864
            ||||||||  | ||||||||||||
Sbjct: 4368 caaagatgacacgagtggagagtc 4391



 Score = 67.9 bits (34), Expect = 2e-07
 Identities = 193/246 (78%)
 Strand = Plus / Plus

                                                                        
Query: 350  tagcagtgaacctttcacatcccagcaaccaaaaccatcacgaagaaatctgaggttgag 409
            ||||||||| | |||||||||    ||| ||||| ||||| || | ||||||||| ||||
Sbjct: 2832 tagcagtgaccttttcacatctggacaatcaaaatcatcaagatggaatctgaggctgag 2891

                                                                        
Query: 410  aaaggacgttcctcaagatcactcctcttgttggtatgatgatggccgagatgaatctag 469
            ||| ||  | ||||||||||| ||||||||||| ||||||||  || ||||||||  | |
Sbjct: 2892 aaaagatttccctcaagatcagtcctcttgttgctatgatgagtgcggagatgaaaatgg 2951

                                                                        
Query: 470  aagtgctggcaatctgcagtggcgatcaatggaaaggatgagaaatggtgatgggggttg 529
            |||   |||  || | ||||||| ||||| ||||||||  ||| || |||   |  ||||
Sbjct: 2952 aagcattggtgattttcagtggcaatcaaaggaaaggacaagacatagtgcccgaagttg 3011

                                                                        
Query: 530  taactcggtgtgtagtacaaataacagaacaagatataggcaagactacaattcttgcag 589
            |||||| |||| || ||||||||||||||||||  |||| ||  |||||| ||| | |||
Sbjct: 3012 taactcagtgtttactacaaataacagaacaagggatagacacaactacatttccttcag 3071

                  
Query: 590  ctgtga 595
            ||||||
Sbjct: 3072 ctgtga 3077



 Score = 65.9 bits (33), Expect = 6e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                     
Query: 1525 ctgatttcccagtgcaatacaacaatgtacatcgctacccagctcctgcttttagtt 1581
            ||||||| |||||||| |||| |||||| |||| || ||||||||||||||||||||
Sbjct: 4049 ctgattttccagtgcagtacagcaatgttcatcacttcccagctcctgcttttagtt 4105



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                        
Query: 640  caactagatcaggtagggagatgaagatggcaaagaaaacaggtgttgataagcctttgg 699
            ||||| |||||||||||||||  ||||||||||  |||||||| ||||| |  |||  ||
Sbjct: 3122 caactggatcaggtagggagacaaagatggcaagaaaaacaggagttgagagacctaggg 3181

                       
Query: 700  tgcagtaccgc 710
            |||||||||||
Sbjct: 3182 tgcagtaccgc 3192



 Score = 52.0 bits (26), Expect = 0.009
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                          
Query: 220  cagctagtgaagaggaagataattccacag 249
            ||||||||||||| ||||||||||||||||
Sbjct: 2690 cagctagtgaagaagaagataattccacag 2719
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>dbj|AK069173.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007A11, full
            insert sequence
          Length = 2861

 Score =  214 bits (108), Expect = 1e-51
 Identities = 237/280 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1026 tcaacaaataatgaaggttctaagccagacgaagagctgatgacgaactctgtcagttct 1085
            ||||||||  |||||||||||  ||  || ||||||||||||| |||||||  |||||||
Sbjct: 1783 tcaacaaaagatgaaggttctgggcatgatgaagagctgatgatgaactctaccagttct 1842

                                                                        
Query: 1086 gatggctcatcttcttgtatgagcgaggcagatagagaaagcagttcaagcagtgtgacg 1145
            |||||||  ||||| |||| ||| || |||||||||||||||||  ||||||||||||| 
Sbjct: 1843 gatggcttgtcttcatgtacgagtgaagcagatagagaaagcagcacaagcagtgtgact 1902

                                                                        
Query: 1146 tctttgagcgctcgtactccagaatcatcatcatctgactcagaggaatcttcggagaga 1205
            |||||||||||||    || ||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 1903 tctttgagcgctcaacatcaagaatcatcatcatctgactctgaggaatctccagagaga 1962

                                                                        
Query: 1206 gtcaacagaattacagaagctccatcaacaagaactgcttcacgttctttatttgagacg 1265
            |||||||| ||    ||||||||||||||||  || | |||||| || ||| ||||| | 
Sbjct: 1963 gtcaacagcatcgaggaagctccatcaacaaagaccgtttcacggtccttacttgaggct 2022

                                                    
Query: 1266 tgtgcaggaaatggtttcagagaataccacccaaaagcca 1305
            ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 2023 tgtgcaggaaaaggtttcagagaataccaaccaaaagcca 2062



 Score = 71.9 bits (36), Expect = 1e-08
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1781 tgcatccttctcattgttccaattcaacctgccgatagctccgcaaggccaaccgtcacc 1840
            |||||||||||| |||||||||||||||||||| |||||||| |  | || ||| ||| |
Sbjct: 2541 tgcatccttctcgttgttccaattcaacctgccaatagctccccctgccccaccatcatc 2600

                                    
Query: 1841 caaagatggtaagagtggagagtc 1864
            ||||||||  | ||||||||||||
Sbjct: 2601 caaagatgacacgagtggagagtc 2624



 Score = 67.9 bits (34), Expect = 2e-07
 Identities = 193/246 (78%)
 Strand = Plus / Plus

                                                                        
Query: 350  tagcagtgaacctttcacatcccagcaaccaaaaccatcacgaagaaatctgaggttgag 409
            ||||||||| | |||||||||    ||| ||||| ||||| || | ||||||||| ||||
Sbjct: 1065 tagcagtgaccttttcacatctggacaatcaaaatcatcaagatggaatctgaggctgag 1124

                                                                        
Query: 410  aaaggacgttcctcaagatcactcctcttgttggtatgatgatggccgagatgaatctag 469
            ||| ||  | ||||||||||| ||||||||||| ||||||||  || ||||||||  | |
Sbjct: 1125 aaaagatttccctcaagatcagtcctcttgttgctatgatgagtgcggagatgaaaatgg 1184

                                                                        
Query: 470  aagtgctggcaatctgcagtggcgatcaatggaaaggatgagaaatggtgatgggggttg 529
            |||   |||  || | ||||||| ||||| ||||||||  ||| || |||   |  ||||
Sbjct: 1185 aagcattggtgattttcagtggcaatcaaaggaaaggacaagacatagtgcccgaagttg 1244

                                                                        
Query: 530  taactcggtgtgtagtacaaataacagaacaagatataggcaagactacaattcttgcag 589
            |||||| |||| || ||||||||||||||||||  |||| ||  |||||| ||| | |||
Sbjct: 1245 taactcagtgtttactacaaataacagaacaagggatagacacaactacatttccttcag 1304

                  
Query: 590  ctgtga 595
            ||||||
Sbjct: 1305 ctgtga 1310



 Score = 65.9 bits (33), Expect = 6e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                     
Query: 1525 ctgatttcccagtgcaatacaacaatgtacatcgctacccagctcctgcttttagtt 1581
            ||||||| |||||||| |||| |||||| |||| || ||||||||||||||||||||
Sbjct: 2282 ctgattttccagtgcagtacagcaatgttcatcacttcccagctcctgcttttagtt 2338



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                        
Query: 640  caactagatcaggtagggagatgaagatggcaaagaaaacaggtgttgataagcctttgg 699
            ||||| |||||||||||||||  ||||||||||  |||||||| ||||| |  |||  ||
Sbjct: 1355 caactggatcaggtagggagacaaagatggcaagaaaaacaggagttgagagacctaggg 1414

                       
Query: 700  tgcagtaccgc 710
            |||||||||||
Sbjct: 1415 tgcagtaccgc 1425



 Score = 52.0 bits (26), Expect = 0.009
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 220 cagctagtgaagaggaagataattccacag 249
           ||||||||||||| ||||||||||||||||
Sbjct: 923 cagctagtgaagaagaagataattccacag 952
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  113 bits (57), Expect = 3e-21
 Identities = 121/141 (85%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1166   agaatcatcatcatctgactcagaggaatcttcggagagagtcaacagaattacagaagc 1225
              ||||||||||||||| ||||| ||||||||| | || ||||| ||||| ||  |||||||
Sbjct: 963551 agaatcatcatcatccgactctgaggaatctccagaaagagttaacagcatcgcagaagc 963492

                                                                          
Query: 1226   tccatcaacaagaactgcttcacgttctttatttgagacgtgtgcaggaaatggtttcag 1285
              |||||||||||  || |||||||| |||||| ||||| | ||||||||||| ||| ||||
Sbjct: 963491 tccatcaacaaagaccgcttcacggtctttacttgaggcttgtgcaggaaaaggtatcag 963432

                                   
Query: 1286   agaatacc-acccaaaagcca 1305
              ||||| || ||||||||||||
Sbjct: 963431 agaattccaacccaaaagcca 963411
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>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0062J13
          Length = 152837

 Score =  113 bits (57), Expect = 3e-21
 Identities = 121/141 (85%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1166  agaatcatcatcatctgactcagaggaatcttcggagagagtcaacagaattacagaagc 1225
             ||||||||||||||| ||||| ||||||||| | || ||||| ||||| ||  |||||||
Sbjct: 26424 agaatcatcatcatccgactctgaggaatctccagaaagagttaacagcatcgcagaagc 26365

                                                                         
Query: 1226  tccatcaacaagaactgcttcacgttctttatttgagacgtgtgcaggaaatggtttcag 1285
             |||||||||||  || |||||||| |||||| ||||| | ||||||||||| ||| ||||
Sbjct: 26364 tccatcaacaaagaccgcttcacggtctttacttgaggcttgtgcaggaaaaggtatcag 26305

                                  
Query: 1286  agaatacc-acccaaaagcca 1305
             ||||| || ||||||||||||
Sbjct: 26304 agaattccaacccaaaagcca 26284
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>gb|AY105793.1| Zea mays PCO117628 mRNA sequence
          Length = 1225

 Score = 65.9 bits (33), Expect = 6e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                         
Query: 1258 ttgagacgtgtgcaggaaatggtttcagagaataccacccaaaag 1302
            |||||| |||||||||||||||||||||||| ||||| |||||||
Sbjct: 560  ttgagatgtgtgcaggaaatggtttcagagagtaccaaccaaaag 604



 Score = 46.1 bits (23), Expect = 0.55
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 1786 ccttctcattgttccaattcaacctgccgat 1816
            ||||||| |||||||| ||||||||||||||
Sbjct: 1121 ccttctccttgttccagttcaacctgccgat 1151
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>gb|AY104349.1| Zea mays PCO090380 mRNA sequence
          Length = 998

 Score = 56.0 bits (28), Expect = 6e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                    
Query: 1781 tgcatccttctcattgttccaattcaacctgccgatagct 1820
            |||||||||||| ||||||||||||||| |||| ||||||
Sbjct: 673  tgcatccttctcgttgttccaattcaacttgccaatagct 712



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                   
Query: 1240 ctgcttcacgttctttatttgagacgtgtgcaggaaatggtttcagagaatacca 1294
            |||||||||| |||||  ||||  | |||||||| ||||||||||||||||||||
Sbjct: 123  ctgcttcacggtctttgcttgaagcatgtgcaggtaatggtttcagagaatacca 177
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>ref|NM_001070559.1| Oryza sativa (japonica cultivar-group) Os10g0105400 (Os10g0105400)
            mRNA, complete cds
          Length = 3857

 Score = 54.0 bits (27), Expect = 0.002
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 1248 cgttctttatttgagacgtgtgcaggaaatggtttcagagaatacca 1294
            ||||| ||| |||| | ||| ||||||||||||||||||||||||||
Sbjct: 2866 cgttcattacttgaaatgtgcgcaggaaatggtttcagagaatacca 2912
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>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19,
              complete sequence
          Length = 174752

 Score = 54.0 bits (27), Expect = 0.002
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                             
Query: 1248   cgttctttatttgagacgtgtgcaggaaatggtttcagagaatacca 1294
              ||||| ||| |||| | ||| ||||||||||||||||||||||||||
Sbjct: 151824 cgttcattacttgaaatgtgcgcaggaaatggtttcagagaatacca 151778
to top
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 54.0 bits (27), Expect = 0.002
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                             
Query: 1248   cgttctttatttgagacgtgtgcaggaaatggtttcagagaatacca 1294
              ||||| ||| |||| | ||| ||||||||||||||||||||||||||
Sbjct: 386766 cgttcattacttgaaatgtgcgcaggaaatggtttcagagaatacca 386720
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 54.0 bits (27), Expect = 0.002
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                             
Query: 1248   cgttctttatttgagacgtgtgcaggaaatggtttcagagaatacca 1294
              ||||| ||| |||| | ||| ||||||||||||||||||||||||||
Sbjct: 386766 cgttcattacttgaaatgtgcgcaggaaatggtttcagagaatacca 386720
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>dbj|AK103627.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133O13, full
            insert sequence
          Length = 3884

 Score = 54.0 bits (27), Expect = 0.002
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 1248 cgttctttatttgagacgtgtgcaggaaatggtttcagagaatacca 1294
            ||||| ||| |||| | ||| ||||||||||||||||||||||||||
Sbjct: 2891 cgttcattacttgaaatgtgcgcaggaaatggtttcagagaatacca 2937
to top
>dbj|AK072495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132L09, full
            insert sequence
          Length = 1923

 Score = 54.0 bits (27), Expect = 0.002
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 1248 cgttctttatttgagacgtgtgcaggaaatggtttcagagaatacca 1294
            ||||| ||| |||| | ||| ||||||||||||||||||||||||||
Sbjct: 959  cgttcattacttgaaatgtgcgcaggaaatggtttcagagaatacca 1005
to top
>ref|NM_106030.1| Arabidopsis thaliana unknown protein (AT1G73710) mRNA, complete cds
          Length = 2976

 Score = 46.1 bits (23), Expect = 0.55
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 1222 aagctccatcaacaagaactgcttcacgttc 1252
            |||||||||| ||||||||||||||| ||||
Sbjct: 828  aagctccatcgacaagaactgcttcaagttc 798
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>emb|AL611944.10| Mouse DNA sequence from clone RP23-279E14 on chromosome 13 Contains the
             gene for the ortholog of rat and human
             ubiquinol-cytochrome c reductase, Rieske iron-sulfur
             polypeptide 1 UQCRFS1, a novel gene and a CpG island,
             complete sequence
          Length = 194065

 Score = 46.1 bits (23), Expect = 0.55
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 782   gactggcttacatgatacagata 804
             |||||||||||||||||||||||
Sbjct: 75339 gactggcttacatgatacagata 75361
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>gb|AC012679.5|AC012679 Arabidopsis thaliana chromosome 1 BAC F25P22 genomic sequence, complete
             sequence
          Length = 105937

 Score = 46.1 bits (23), Expect = 0.55
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 1222  aagctccatcaacaagaactgcttcacgttc 1252
             |||||||||| ||||||||||||||| ||||
Sbjct: 49961 aagctccatcgacaagaactgcttcaagttc 49931
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>gb|AY205606.1| Glycine max cultivar Williams 82 SIRE1-2 retroelement, partial
            sequence
          Length = 8220

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1165 cagaatcatcatcatctgactc 1186
            ||||||||||||||||||||||
Sbjct: 6359 cagaatcatcatcatctgactc 6338
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>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 147560

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 509   gagaaatggtgatgggggttgt 530
             ||||||||||||||||||||||
Sbjct: 88458 gagaaatggtgatgggggttgt 88437
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>dbj|AK030980.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830475A02 product:unclassifiable, full
            insert sequence
          Length = 2812

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 527  ttgtaactcggtgtgtagtaca 548
            ||||||||||||||||||||||
Sbjct: 2739 ttgtaactcggtgtgtagtaca 2760
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>gb|AC105347.4| Homo sapiens BAC clone RP11-719M16 from 4, complete sequence
          Length = 69570

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1496  tggattccgagtacctgggaac 1517
             ||||||||||||||||||||||
Sbjct: 63474 tggattccgagtacctgggaac 63453
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>gb|AC010238.6| Homo sapiens chromosome 5 clone CTC-349C3, complete sequence
          Length = 167022

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 369   tcccagcaaccaaaaccatcac 390
             ||||||||||||||||||||||
Sbjct: 56075 tcccagcaaccaaaaccatcac 56096
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>gb|AC154828.2| Mus musculus BAC clone RP24-549A19 from 13, complete sequence
          Length = 138426

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 527   ttgtaactcggtgtgtagtaca 548
             ||||||||||||||||||||||
Sbjct: 37793 ttgtaactcggtgtgtagtaca 37772
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>emb|AL133316.5|CNS01DUR Human chromosome 14 DNA sequence Partial sequence from BAC C-2577N12 of
             library CalTech-D from chromosome 14 of Homo sapiens
             (Human), complete sequence
          Length = 158473

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2074  aaggatgttttgagtggttttt 2095
             ||||||||||||||||||||||
Sbjct: 61022 aaggatgttttgagtggttttt 61043
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>emb|AL132716.6|CNS01DTF Human chromosome 14 DNA sequence BAC R-1124A8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 155619

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2074  aaggatgttttgagtggttttt 2095
             ||||||||||||||||||||||
Sbjct: 74311 aaggatgttttgagtggttttt 74332
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>gb|AC174379.16| Medicago truncatula chromosome 8 clone mth2-57p18, complete sequence
          Length = 125071

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 2077   gatgttttgagtggtttttctgtat 2101
              ||||||||||||||| |||||||||
Sbjct: 109642 gatgttttgagtggtgtttctgtat 109618
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>gb|AC186174.2| Gallus gallus BAC clone CH261-92O14 from chromosome z, complete sequence
          Length = 218793

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 633    ttgccagcaactagatcaggt 653
              |||||||||||||||||||||
Sbjct: 112894 ttgccagcaactagatcaggt 112874
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>gb|CP000383.1| Cytophaga hutchinsonii ATCC 33406, complete genome
          Length = 4433218

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1751    tccagatggtaacaaattggc 1771
               |||||||||||||||||||||
Sbjct: 2773166 tccagatggtaacaaattggc 2773186
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>dbj|AB000298.1| Human astrovirus 1 gene for outer capsid protein, complete cds,
            isolate: O-1
          Length = 2367

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1169 atcatcatcatctgactcaga 1189
            |||||||||||||||||||||
Sbjct: 2114 atcatcatcatctgactcaga 2094
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>dbj|AB000297.1| Human astrovirus 1 gene for outer capsid protein, complete cds,
            isolate: S5 standard
          Length = 2404

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1169 atcatcatcatctgactcaga 1189
            |||||||||||||||||||||
Sbjct: 2150 atcatcatcatctgactcaga 2130
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>emb|BX005017.13| Zebrafish DNA sequence from clone DKEY-200P10 in linkage group 12,
             complete sequence
          Length = 111448

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 1008  aataaacaaaaatgtaagtcaacaaataa 1036
             ||||||||||||||||| | |||||||||
Sbjct: 77604 aataaacaaaaatgtaaataaacaaataa 77576
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>gb|AC102469.7| Mus musculus chromosome 1, clone RP24-356O3, complete sequence
          Length = 173767

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1476  aatttcttctctggtccagtt 1496
             |||||||||||||||||||||
Sbjct: 56964 aatttcttctctggtccagtt 56984
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>gb|AC120877.15| Mus musculus chromosome 6, clone RP24-548D19, complete sequence
          Length = 228206

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1004   aacaaataaacaaaaatgtaagtca 1028
              |||||| ||||||||||||||||||
Sbjct: 215000 aacaaacaaacaaaaatgtaagtca 215024
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>gb|AC159332.11| Mus musculus 6 BAC RP23-413D8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208808

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1004   aacaaataaacaaaaatgtaagtca 1028
              |||||| ||||||||||||||||||
Sbjct: 149237 aacaaacaaacaaaaatgtaagtca 149213
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>gb|AC163636.5| Mus musculus BAC clone RP24-499E13 from chromosome 1, complete sequence
          Length = 173781

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 781   agactggcttacatgatacag 801
             |||||||||||||||||||||
Sbjct: 80885 agactggcttacatgatacag 80905
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>gb|AC004931.1| Homo sapiens PAC clone RP5-922I23 from 7, complete sequence
          Length = 145844

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1002  ataacaaataaacaaaaatgt 1022
             |||||||||||||||||||||
Sbjct: 40328 ataacaaataaacaaaaatgt 40348
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>gb|AC124477.4| Mus musculus BAC clone RP24-103A12 from chromosome 9, complete sequence
          Length = 151238

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1476  aatttcttctctggtccagtt 1496
             |||||||||||||||||||||
Sbjct: 63707 aatttcttctctggtccagtt 63687
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>gb|AC122266.2| Mus musculus BAC clone RP23-213K18 from 8, complete sequence
          Length = 195246

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1005   acaaataaacaaaaatgtaag 1025
              |||||||||||||||||||||
Sbjct: 101028 acaaataaacaaaaatgtaag 101008
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>gb|AC117254.3| Mus musculus BAC clone RP24-418D1 from 6, complete sequence
          Length = 172656

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1476  aatttcttctctggtccagtt 1496
             |||||||||||||||||||||
Sbjct: 26315 aatttcttctctggtccagtt 26335
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>gb|AC115721.11| Mus musculus chromosome 3, clone RP23-9P8, complete sequence
          Length = 218746

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1914   agagagcagacagatgtgaag 1934
              |||||||||||||||||||||
Sbjct: 135236 agagagcagacagatgtgaag 135256
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>gb|AC160549.5| Mus musculus chromosome 3, clone RP23-276K18, complete sequence
          Length = 157222

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1914  agagagcagacagatgtgaag 1934
             |||||||||||||||||||||
Sbjct: 31586 agagagcagacagatgtgaag 31606
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>gb|AC158362.5| Mus musculus BAC clone RP23-214K5 from chromosome 8, complete sequence
          Length = 201185

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1005   acaaataaacaaaaatgtaag 1025
              |||||||||||||||||||||
Sbjct: 149081 acaaataaacaaaaatgtaag 149101
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>gb|AC025593.6| Homo sapiens chromosome 7 clone RP11-18L16, complete sequence
          Length = 184453

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 796   atacagataacatatcagtat 816
             |||||||||||||||||||||
Sbjct: 39530 atacagataacatatcagtat 39550
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>dbj|AK075382.1| Homo sapiens cDNA PSEC0072 fis, clone NT2RP2002429, highly similar to
            ATPase, H+ transporting, lysosomal accessory protein 2
          Length = 2092

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 614  aacagaggacaactgtttttt 634
            |||||||||||||||||||||
Sbjct: 1757 aacagaggacaactgtttttt 1777
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>gb|DQ085871.1| HIV-1 isolate BREPM11948 from Brazil, complete genome
          Length = 8890

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 284  atgcatagaaattgatggaca 304
            |||||||||||||||||||||
Sbjct: 1853 atgcatagaaattgatggaca 1873
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>ref|XM_747093.1| Aspergillus fumigatus Af293 sterol carrier protein (Afu4g06380)
           partial mRNA
          Length = 1377

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 440 ttggtatgatgatggccgaga 460
           |||||||||||||||||||||
Sbjct: 404 ttggtatgatgatggccgaga 424
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>ref|NM_017306.3| Rattus norvegicus dodecenoyl-coenzyme A delta isomerase (Dci), mRNA
          Length = 972

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1061 gctgatgacgaactctgtcag 1081
            |||||||||||||||||||||
Sbjct: 220  gctgatgacgaactctgtcag 200
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>gb|AC154838.2| Mus musculus BAC clone RP23-64F2 from chromosome 14, complete sequence
          Length = 224431

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 369    tcccagcaaccaaaaccatca 389
              |||||||||||||||||||||
Sbjct: 120167 tcccagcaaccaaaaccatca 120147
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>gb|AC008265.15|AC008265 Homo sapiens chromosome 7 clone RP11-256C24, complete sequence
          Length = 170537

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 796   atacagataacatatcagtat 816
             |||||||||||||||||||||
Sbjct: 27462 atacagataacatatcagtat 27442
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>emb|Y08633.1|HASCAPU1 Human astrovirus gene encoding capsid protein precursor (partial),
            isolate GII33
          Length = 399

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1169 atcatcatcatctgactcaga 1189
            |||||||||||||||||||||
Sbjct: 65   atcatcatcatctgactcaga 45
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>gb|BC078705.1| Rattus norvegicus dodecenoyl-coenzyme A delta isomerase, mRNA (cDNA
            clone MGC:93116 IMAGE:7129389), complete cds
          Length = 989

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1061 gctgatgacgaactctgtcag 1081
            |||||||||||||||||||||
Sbjct: 209  gctgatgacgaactctgtcag 189
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>gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, complete sequence
          Length = 200326

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1007   aaataaacaaaaatgtaagtcaaca 1031
              ||||||| |||||||||||||||||
Sbjct: 133055 aaataaataaaaatgtaagtcaaca 133079
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>gb|AC162941.5| Mus musculus BAC clone RP23-78N5 from chromosome 9, complete sequence
          Length = 230344

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 1779  agtgcatccttctcattgttccaattcaa 1807
             |||||||||||| | ||||||||||||||
Sbjct: 87056 agtgcatccttccctttgttccaattcaa 87028
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>gb|DQ155665.1| Didelphis virginiana Na+-dependent neutral amino acid transporter
           mRNA, complete cds
          Length = 1916

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 226 gtgaagaggaagataattcca 246
           |||||||||||||||||||||
Sbjct: 773 gtgaagaggaagataattcca 753
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>emb|X61184.1|RNTEISOM Rat mRNA for mitochondrial 3-2trans-enoyl-CoA isomerase
          Length = 987

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1061 gctgatgacgaactctgtcag 1081
            |||||||||||||||||||||
Sbjct: 220  gctgatgacgaactctgtcag 200
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>gb|AC154519.2| Mus musculus BAC clone RP23-216L13 from chromosome 9, complete sequence
          Length = 209719

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 1779  agtgcatccttctcattgttccaattcaa 1807
             |||||||||||| | ||||||||||||||
Sbjct: 20347 agtgcatccttccctttgttccaattcaa 20375
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>dbj|AB037274.1| Human astrovirus type 5 gene for capsid protein precursor, complete
            cds, strain:CHN198
          Length = 2750

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1169 atcatcatcatctgactcaga 1189
            |||||||||||||||||||||
Sbjct: 2406 atcatcatcatctgactcaga 2386
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>dbj|AB037273.1| Human astrovirus type 5 gene for capsid protein precursor, complete
            cds, strain:CHN146
          Length = 2514

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1169 atcatcatcatctgactcaga 1189
            |||||||||||||||||||||
Sbjct: 2167 atcatcatcatctgactcaga 2147
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>gb|U15136.1|HAU15136 Human astrovirus type 5 major capsid protein precursor mRNA, complete
            cds
          Length = 2382

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1169 atcatcatcatctgactcaga 1189
            |||||||||||||||||||||
Sbjct: 2117 atcatcatcatctgactcaga 2097
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>gb|M61112.1|RATD2D3COA Rat delta-3,delta-2-enoyl-CoA isomerase mRNA, complete cds
          Length = 918

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1061 gctgatgacgaactctgtcag 1081
            |||||||||||||||||||||
Sbjct: 198  gctgatgacgaactctgtcag 178
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>emb|AL512356.6|CNS07EF5 Human chromosome 14 DNA sequence BAC R-44N21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158467

 Score = 42.1 bits (21), Expect = 8.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 653   tagggagatgaagatggcaaa 673
             |||||||||||||||||||||
Sbjct: 57014 tagggagatgaagatggcaaa 57034


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 405,257,261
Number of extensions: 21954907
Number of successful extensions: 139699
Number of sequences better than 10.0: 63
Number of HSP's gapped: 139689
Number of HSP's successfully gapped: 95
Length of query: 2261
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2238
Effective length of database: 18,503,978,556
Effective search space: 41411904008328
Effective search space used: 41411904008328
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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