ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf164f03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK100450:Os12g0596900 379 e-105
2Os01g0641100:Os01g0641100 35 0.15
3AK108683:Os05g0128300 31 1.6
4Os10g0204000:Os10g0204000 31 2.1
5AK120222:Os07g0596300 31 2.1
6AK072094:Os01g0779400 30 2.8
7AK072085:Os01g0779400 30 2.8
8Os05g0573900:Os05g0573900 30 4.7
9AK098934:Os09g0110300 29 6.2
10AK061798:Os09g0110300 29 6.2

>AK100450:Os12g0596900 |
          Length = 289
 Score =  379 bits (972), Expect = e-105
 Identities = 184/256 (71%), Positives = 215/256 (83%)
 Frame = +3

Query: 357  GQAHGSQQYVNCMPCSRTYVADAHVGSLARQLSQHRDLTEVPDTADLCKGLADELDVPAL 536
            GQA  SQ++  CMPCSR YVAD+++ +L  QL+QHRDLTE  D+AD CKGL  +LD P L
Sbjct: 31   GQAGTSQKFNKCMPCSRRYVADSYLDTLIGQLAQHRDLTETSDSADSCKGLDYDLDAPML 90

Query: 537  SEVHRQLVGEGSHRRLIYSVKFGNSKDGMVQFLDGYDASLVLIEKLPRGVFADPFELQHF 716
            +E+H +LVGEGSHRRL+Y V+F N  D MV FLD YDA+LV+IE LP GVFADPFELQHF
Sbjct: 91   TELHSELVGEGSHRRLVYHVEFANCADAMVNFLDNYDANLVVIENLPNGVFADPFELQHF 150

Query: 717  VERKVFLDVAVFGDTNLELPSALSNWSAVEIHFDLKPSTSMGYNLVIELPLHARYPPLDA 896
            VERKV+LD+ VFGDTNLELPSALSN S+VEIH DL P  SM  NLVI+LPLHARYPPLDA
Sbjct: 151  VERKVYLDMVVFGDTNLELPSALSNRSSVEIHVDLAPLASMNCNLVIDLPLHARYPPLDA 210

Query: 897  SDYATVEFGSPDLLLRYRRKETHPDSCVCVLQNLDATPVEKAAWRIPCGDKAHTGFVSSL 1076
            S YATVEFGSPDLLLRYR+K+T P+SC  +L++LDA PVEKA WRIPCGD+AH GFVSS+
Sbjct: 211  SGYATVEFGSPDLLLRYRKKDTVPESCSWLLKDLDAAPVEKATWRIPCGDEAHIGFVSSI 270

Query: 1077 TFISALVCSMSIVLAA 1124
            TF+SALVCS+ IV+AA
Sbjct: 271  TFLSALVCSILIVIAA 286



to top

>Os01g0641100:Os01g0641100 |
          Length = 461

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 16/33 (48%), Positives = 16/33 (48%)
 Frame = +3

Query: 138 P*PYAPTHGGPTGYPPSGPRGRLANPSGGALPR 236
           P P AP H  P   PP G   RL  P GG L R
Sbjct: 67  PPPQAPIHSAPRALPPMGVTTRLPAPPGGGLQR 99



to top

>AK108683:Os05g0128300 |
          Length = 364

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 920  WQPRPAPTLQEKGNPS*FLCVCPPESRRHARGE 1018
            W P PAP L+E+G+    L   P  + RH  GE
Sbjct: 89   WPPPPAPYLKEEGDEFIVLSFSPDAASRHDNGE 121



to top

>Os10g0204000:Os10g0204000 |
          Length = 270

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
 Frame = +3

Query: 99  PRSPPQKKIRRASP*PYAPTHGGPTGYP-PSGPR-----GRLANPSGGALPR-SFLAP-- 251
           PRS P  + R  SP P  P+ G       P  PR     GR+A PS  ALPR S  AP  
Sbjct: 5   PRSMP--RTRPPSPTPQPPSLGRSLHISTPLSPRNHLQRGRIAYPSSDALPRCSTHAPPK 62

Query: 252 -LPFFS 266
            LPF+S
Sbjct: 63  HLPFYS 68



to top

>AK120222:Os07g0596300 |
          Length = 754

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 19/53 (35%), Positives = 19/53 (35%)
 Frame = +3

Query: 99  PRSPPQKKIRRASP*PYAPTHGGPTGYPPSGPRGRLANPSGGALPRSFLAPLP 257
           P  PP      A P P  P  GG    PP  P GRL  P     P     P P
Sbjct: 232 PPPPPPSTRLGAPPPPPPPGAGGRAPPPPPAPGGRLGGPPPPPPPGGRAPPPP 284



to top

>AK072094:Os01g0779400 |
          Length = 1213

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 1/93 (1%)
 Frame = -2

Query: 978 HRNQDGFPFSCNVGAGLGCQTQPLHNRWHQEVDI*HGEEALLQGYSPLMCLA*DQNESQQ 799
           H     FP S          + P+H  +H++ DI     + + G S   C + D N    
Sbjct: 342 HLQNSMFPVSTQHQHSFMNSSDPMHPTFHKKYDIPRNGSSSILGNSSRNCFSLDSNRDSD 401

Query: 798 LTSWTGQRAV-QGLCLQKQQHQEKLSAQQSAAA 703
           L    G R++  G  L  Q  Q     QQS  A
Sbjct: 402 LCILEGSRSLASGHVLPPQGLQHNF--QQSVCA 432



to top

>AK072085:Os01g0779400 |
          Length = 1228

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 1/93 (1%)
 Frame = -2

Query: 978 HRNQDGFPFSCNVGAGLGCQTQPLHNRWHQEVDI*HGEEALLQGYSPLMCLA*DQNESQQ 799
           H     FP S          + P+H  +H++ DI     + + G S   C + D N    
Sbjct: 357 HLQNSMFPVSTQHQHSFMNSSDPMHPTFHKKYDIPRNGSSSILGNSSRNCFSLDSNRDSD 416

Query: 798 LTSWTGQRAV-QGLCLQKQQHQEKLSAQQSAAA 703
           L    G R++  G  L  Q  Q     QQS  A
Sbjct: 417 LCILEGSRSLASGHVLPPQGLQHNF--QQSVCA 447



to top

>Os05g0573900:Os05g0573900 |
          Length = 694

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
 Frame = +3

Query: 99  PRSPPQKKIRRASP*PYAPTHG--GPTGYPPSGPRGRLANPSGGALPRSFLAPLPFFSTI 272
           P  PP  + R ASP P   + G  GP   PP         P   A  R+     P  +T 
Sbjct: 314 PPPPPMPRSRSASPSPSTSSSGSAGPPAPPP---------PPPPAAKRTSRTSTP-ATTS 363

Query: 273 SMAAGSGPC 299
           S A  SGPC
Sbjct: 364 SSAPASGPC 372



to top

>AK098934:Os09g0110300 |
          Length = 267

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
 Frame = +3

Query: 468 LTEVPDTADLCKGLADELDVPALSEVHRQLVGE-GSHRRLIYSVKFGNS-----KDGMVQ 629
           L +VP  +++   + + L +P    V R L     + R+L++  +F  S     KDG   
Sbjct: 135 LVDVPRDSNITANVMESLHIP--KGVRRVLFRTLNTDRKLMWKKEFDTSYVGFMKDGAQW 192

Query: 630 FLDGYDASLVLIEKLPRGVFAD--PFELQHFVERKVFL 737
            +D  D  LV ++ L  G F +  P  L    +R+V L
Sbjct: 193 LIDNTDIRLVGVDYLSVGAFDECIPAHLVFLEKREVIL 230



to top

>AK061798:Os09g0110300 |
          Length = 267

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
 Frame = +3

Query: 468 LTEVPDTADLCKGLADELDVPALSEVHRQLVGE-GSHRRLIYSVKFGNS-----KDGMVQ 629
           L +VP  +++   + + L +P    V R L     + R+L++  +F  S     KDG   
Sbjct: 135 LVDVPRDSNITANVMESLHIP--KGVRRVLFRTLNTDRKLMWKKEFDTSYVGFMKDGAQW 192

Query: 630 FLDGYDASLVLIEKLPRGVFAD--PFELQHFVERKVFL 737
            +D  D  LV ++ L  G F +  P  L    +R+V L
Sbjct: 193 LIDNTDIRLVGVDYLSVGAFDECIPAHLVFLEKREVIL 230


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 39,584,016
Number of extensions: 1012714
Number of successful extensions: 3592
Number of sequences better than 10.0: 10
Number of HSP's gapped: 3570
Number of HSP's successfully gapped: 10
Length of query: 421
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 318
Effective length of database: 11,275,632
Effective search space: 3585650976
Effective search space used: 3585650976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top