| Clone Name | FLbaf164f03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100450:Os12g0596900 | 379 | e-105 | 2 | Os01g0641100:Os01g0641100 | 35 | 0.15 | 3 | AK108683:Os05g0128300 | 31 | 1.6 | 4 | Os10g0204000:Os10g0204000 | 31 | 2.1 | 5 | AK120222:Os07g0596300 | 31 | 2.1 | 6 | AK072094:Os01g0779400 | 30 | 2.8 | 7 | AK072085:Os01g0779400 | 30 | 2.8 | 8 | Os05g0573900:Os05g0573900 | 30 | 4.7 | 9 | AK098934:Os09g0110300 | 29 | 6.2 | 10 | AK061798:Os09g0110300 | 29 | 6.2 |
|---|
>AK100450:Os12g0596900 | Length = 289 Score = 379 bits (972), Expect = e-105 Identities = 184/256 (71%), Positives = 215/256 (83%) Frame = +3 Query: 357 GQAHGSQQYVNCMPCSRTYVADAHVGSLARQLSQHRDLTEVPDTADLCKGLADELDVPAL 536 GQA SQ++ CMPCSR YVAD+++ +L QL+QHRDLTE D+AD CKGL +LD P L Sbjct: 31 GQAGTSQKFNKCMPCSRRYVADSYLDTLIGQLAQHRDLTETSDSADSCKGLDYDLDAPML 90 Query: 537 SEVHRQLVGEGSHRRLIYSVKFGNSKDGMVQFLDGYDASLVLIEKLPRGVFADPFELQHF 716 +E+H +LVGEGSHRRL+Y V+F N D MV FLD YDA+LV+IE LP GVFADPFELQHF Sbjct: 91 TELHSELVGEGSHRRLVYHVEFANCADAMVNFLDNYDANLVVIENLPNGVFADPFELQHF 150 Query: 717 VERKVFLDVAVFGDTNLELPSALSNWSAVEIHFDLKPSTSMGYNLVIELPLHARYPPLDA 896 VERKV+LD+ VFGDTNLELPSALSN S+VEIH DL P SM NLVI+LPLHARYPPLDA Sbjct: 151 VERKVYLDMVVFGDTNLELPSALSNRSSVEIHVDLAPLASMNCNLVIDLPLHARYPPLDA 210 Query: 897 SDYATVEFGSPDLLLRYRRKETHPDSCVCVLQNLDATPVEKAAWRIPCGDKAHTGFVSSL 1076 S YATVEFGSPDLLLRYR+K+T P+SC +L++LDA PVEKA WRIPCGD+AH GFVSS+ Sbjct: 211 SGYATVEFGSPDLLLRYRKKDTVPESCSWLLKDLDAAPVEKATWRIPCGDEAHIGFVSSI 270 Query: 1077 TFISALVCSMSIVLAA 1124 TF+SALVCS+ IV+AA Sbjct: 271 TFLSALVCSILIVIAA 286
>Os01g0641100:Os01g0641100 | Length = 461 Score = 34.7 bits (78), Expect = 0.15 Identities = 16/33 (48%), Positives = 16/33 (48%) Frame = +3 Query: 138 P*PYAPTHGGPTGYPPSGPRGRLANPSGGALPR 236 P P AP H P PP G RL P GG L R Sbjct: 67 PPPQAPIHSAPRALPPMGVTTRLPAPPGGGLQR 99
>AK108683:Os05g0128300 | Length = 364 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +2 Query: 920 WQPRPAPTLQEKGNPS*FLCVCPPESRRHARGE 1018 W P PAP L+E+G+ L P + RH GE Sbjct: 89 WPPPPAPYLKEEGDEFIVLSFSPDAASRHDNGE 121
>Os10g0204000:Os10g0204000 | Length = 270 Score = 30.8 bits (68), Expect = 2.1 Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 10/66 (15%) Frame = +3 Query: 99 PRSPPQKKIRRASP*PYAPTHGGPTGYP-PSGPR-----GRLANPSGGALPR-SFLAP-- 251 PRS P + R SP P P+ G P PR GR+A PS ALPR S AP Sbjct: 5 PRSMP--RTRPPSPTPQPPSLGRSLHISTPLSPRNHLQRGRIAYPSSDALPRCSTHAPPK 62 Query: 252 -LPFFS 266 LPF+S Sbjct: 63 HLPFYS 68
>AK120222:Os07g0596300 | Length = 754 Score = 30.8 bits (68), Expect = 2.1 Identities = 19/53 (35%), Positives = 19/53 (35%) Frame = +3 Query: 99 PRSPPQKKIRRASP*PYAPTHGGPTGYPPSGPRGRLANPSGGALPRSFLAPLP 257 P PP A P P P GG PP P GRL P P P P Sbjct: 232 PPPPPPSTRLGAPPPPPPPGAGGRAPPPPPAPGGRLGGPPPPPPPGGRAPPPP 284
>AK072094:Os01g0779400 | Length = 1213 Score = 30.4 bits (67), Expect = 2.8 Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 1/93 (1%) Frame = -2 Query: 978 HRNQDGFPFSCNVGAGLGCQTQPLHNRWHQEVDI*HGEEALLQGYSPLMCLA*DQNESQQ 799 H FP S + P+H +H++ DI + + G S C + D N Sbjct: 342 HLQNSMFPVSTQHQHSFMNSSDPMHPTFHKKYDIPRNGSSSILGNSSRNCFSLDSNRDSD 401 Query: 798 LTSWTGQRAV-QGLCLQKQQHQEKLSAQQSAAA 703 L G R++ G L Q Q QQS A Sbjct: 402 LCILEGSRSLASGHVLPPQGLQHNF--QQSVCA 432
>AK072085:Os01g0779400 | Length = 1228 Score = 30.4 bits (67), Expect = 2.8 Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 1/93 (1%) Frame = -2 Query: 978 HRNQDGFPFSCNVGAGLGCQTQPLHNRWHQEVDI*HGEEALLQGYSPLMCLA*DQNESQQ 799 H FP S + P+H +H++ DI + + G S C + D N Sbjct: 357 HLQNSMFPVSTQHQHSFMNSSDPMHPTFHKKYDIPRNGSSSILGNSSRNCFSLDSNRDSD 416 Query: 798 LTSWTGQRAV-QGLCLQKQQHQEKLSAQQSAAA 703 L G R++ G L Q Q QQS A Sbjct: 417 LCILEGSRSLASGHVLPPQGLQHNF--QQSVCA 447
>Os05g0573900:Os05g0573900 | Length = 694 Score = 29.6 bits (65), Expect = 4.7 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 2/69 (2%) Frame = +3 Query: 99 PRSPPQKKIRRASP*PYAPTHG--GPTGYPPSGPRGRLANPSGGALPRSFLAPLPFFSTI 272 P PP + R ASP P + G GP PP P A R+ P +T Sbjct: 314 PPPPPMPRSRSASPSPSTSSSGSAGPPAPPP---------PPPPAAKRTSRTSTP-ATTS 363 Query: 273 SMAAGSGPC 299 S A SGPC Sbjct: 364 SSAPASGPC 372
>AK098934:Os09g0110300 | Length = 267 Score = 29.3 bits (64), Expect = 6.2 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 8/98 (8%) Frame = +3 Query: 468 LTEVPDTADLCKGLADELDVPALSEVHRQLVGE-GSHRRLIYSVKFGNS-----KDGMVQ 629 L +VP +++ + + L +P V R L + R+L++ +F S KDG Sbjct: 135 LVDVPRDSNITANVMESLHIP--KGVRRVLFRTLNTDRKLMWKKEFDTSYVGFMKDGAQW 192 Query: 630 FLDGYDASLVLIEKLPRGVFAD--PFELQHFVERKVFL 737 +D D LV ++ L G F + P L +R+V L Sbjct: 193 LIDNTDIRLVGVDYLSVGAFDECIPAHLVFLEKREVIL 230
>AK061798:Os09g0110300 | Length = 267 Score = 29.3 bits (64), Expect = 6.2 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 8/98 (8%) Frame = +3 Query: 468 LTEVPDTADLCKGLADELDVPALSEVHRQLVGE-GSHRRLIYSVKFGNS-----KDGMVQ 629 L +VP +++ + + L +P V R L + R+L++ +F S KDG Sbjct: 135 LVDVPRDSNITANVMESLHIP--KGVRRVLFRTLNTDRKLMWKKEFDTSYVGFMKDGAQW 192 Query: 630 FLDGYDASLVLIEKLPRGVFAD--PFELQHFVERKVFL 737 +D D LV ++ L G F + P L +R+V L Sbjct: 193 LIDNTDIRLVGVDYLSVGAFDECIPAHLVFLEKREVIL 230 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 39,584,016 Number of extensions: 1012714 Number of successful extensions: 3592 Number of sequences better than 10.0: 10 Number of HSP's gapped: 3570 Number of HSP's successfully gapped: 10 Length of query: 421 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 318 Effective length of database: 11,275,632 Effective search space: 3585650976 Effective search space used: 3585650976 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)