ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf164f03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001073721.1| Oryza sativa (japonica cultivar-group) Os12g... 214 6e-52
2dbj|AK100450.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 6e-52
3gb|AY111505.1| Zea mays CL34739_1 mRNA sequence 103 2e-18
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 96 4e-16
5emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306... 96 4e-16
6emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa... 96 4e-16
7ref|NM_001048682.1| Oryza sativa (japonica cultivar-group) Os01g... 52 0.005
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.005
9dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.005
10dbj|AK109475.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.005
11dbj|AK107515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.005
12gb|AC115067.7| Mus musculus chromosome 5, clone RP24-404B4, comp... 44 1.2
13gb|AC160126.2| Mus musculus BAC clone RP23-295C1 from chromosome... 44 1.2
14gb|AC109311.12| Mus musculus chromosome 5, clone RP23-42K10, com... 44 1.2
15dbj|AK139425.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 44 1.2
16dbj|AK161965.1| Mus musculus adult male olfactory brain cDNA, RI... 44 1.2
17gb|AC109163.16| Mus musculus chromosome 8, clone RP24-174F12, co... 44 1.2
18emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chrom... 44 1.2
19ref|NM_001068826.1| Oryza sativa (japonica cultivar-group) Os08g... 42 4.8
20gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 4.8
21gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 4.8
22gb|AC154740.2| Mus musculus BAC clone RP23-118I16 from chromosom... 42 4.8
23gb|AC159547.4| Mus musculus 6 BAC RP23-235P6 (Roswell Park Cance... 42 4.8
24ref|XM_798381.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 4.8
25ref|XM_814759.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 4.8
26dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.8
27dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 42 4.8
28dbj|AK073336.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 4.8
29gb|AC153620.4| Mus musculus 6 BAC RP23-326P16 (Roswell Park Canc... 42 4.8
30gb|AC005922.1|AC005922 Homo sapiens chromosome 17, clone hRPK.23... 42 4.8

>ref|NM_001073721.1| Oryza sativa (japonica cultivar-group) Os12g0596900 (Os12g0596900)
            mRNA, complete cds
          Length = 1267
 Score =  214 bits (108), Expect = 6e-52
 Identities = 407/504 (80%), Gaps = 2/504 (0%)
 Strand = Plus / Plus

                                                                        
Query: 447  cagctttctcaacatcgtgacttgaccgaagtacctgataccgctgacttgtgtaaagga 506
            |||||| ||||||||||||||||||| |||  | ||||| | |||||||  || ||||||
Sbjct: 537  cagcttgctcaacatcgtgacttgactgaaacatctgattctgctgactcatgcaaagga 596

                                                                        
Query: 507  cttgctgatgaacttgatgtgcctgcgctttcagaagtgca-tcgtcagctggtgggtga 565
            |||| | |||| |||||||  ||   |||| ||||| |||| |||  | ||||| |||||
Sbjct: 597  cttgattatgatcttgatgcacccatgcttacagaattgcactcggaa-ctggttggtga 655

                                                                        
Query: 566  aggttcccaccgccgcttaatctattctgttaaatttggtaactccaaagatggtatggt 625
            |||||| || |||||  || |||||  |||  |||||| |||||    ||||| ||||||
Sbjct: 656  aggttctcatcgccgtctagtctatcatgtggaatttgctaactgtgcagatgctatggt 715

                                                                        
Query: 626  acaattccttgatggttacgatgccagtctggtgttaattgaaaagctcccaagaggtgt 685
              | |||||||||   || ||||||| ||||||| |||| ||||| ||||| |  |||||
Sbjct: 716  taatttccttgataactatgatgccaatctggtggtaatagaaaatctcccgaatggtgt 775

                                                                        
Query: 686  attcgccgacccatttgagctgcagcactttgttgagcggaaagtttttcttgatgttgc 745
             || || |||||||||||||| || || ||||||||||||||||| | ||||||| | | 
Sbjct: 776  gtttgctgacccatttgagctacaacattttgttgagcggaaagtatatcttgatatggt 835

                                                                        
Query: 746  tgtttttggagacacaaaccttgaactgccctctgccctgtccaactggtcagctgttga 805
            |||||| |||||||| |||||||||||||| || || || |||||| ||||| |||| ||
Sbjct: 836  tgttttcggagacaccaaccttgaactgccttcggctctatccaaccggtcatctgtgga 895

                                                                        
Query: 806  gattcattttgatctcaagccaagcacatcaatgggctataaccttgtaatagagcttcc 865
             || ||| ||||||||   |||    |||| |||  || ||||||||||||||| || ||
Sbjct: 896  aatccatgttgatctcgcaccacttgcatcgatgaactgtaaccttgtaatagacctgcc 955

                                                                        
Query: 866  tctccatgctagatatccacctcttgatgccagcgattatgcaacggttgagtttggcag 925
            ||||||||||||||| ||||||||||||||||| | |||||| |||||||||||||| ||
Sbjct: 956  tctccatgctagatacccacctcttgatgccagtggttatgcgacggttgagtttggtag 1015

                                    
Query: 926  cccagacctgctcctacgttacag 949
            |||||| ||||| |||||||||||
Sbjct: 1016 cccagatctgcttctacgttacag 1039



 Score = 95.6 bits (48), Expect = 4e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1011 gtggagaaagccgcatggcgcataccctgtggcgacaaagcgcacacaggatttgtatct 1070
            |||||||||||  ||||||||||||||||||| ||| ||||||||| |||||||||||||
Sbjct: 1101 gtggagaaagctacatggcgcataccctgtggagacgaagcgcacataggatttgtatct 1160

                                            
Query: 1071 agcctcactttcatttcggctctggtttgctc 1102
            ||  |||||||  |||| ||||| ||||||||
Sbjct: 1161 agtatcacttttctttcagctctagtttgctc 1192



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>dbj|AK100450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090P15, full
            insert sequence
          Length = 1268

 Score =  214 bits (108), Expect = 6e-52
 Identities = 407/504 (80%), Gaps = 2/504 (0%)
 Strand = Plus / Plus

                                                                        
Query: 447  cagctttctcaacatcgtgacttgaccgaagtacctgataccgctgacttgtgtaaagga 506
            |||||| ||||||||||||||||||| |||  | ||||| | |||||||  || ||||||
Sbjct: 538  cagcttgctcaacatcgtgacttgactgaaacatctgattctgctgactcatgcaaagga 597

                                                                        
Query: 507  cttgctgatgaacttgatgtgcctgcgctttcagaagtgca-tcgtcagctggtgggtga 565
            |||| | |||| |||||||  ||   |||| ||||| |||| |||  | ||||| |||||
Sbjct: 598  cttgattatgatcttgatgcacccatgcttacagaattgcactcggaa-ctggttggtga 656

                                                                        
Query: 566  aggttcccaccgccgcttaatctattctgttaaatttggtaactccaaagatggtatggt 625
            |||||| || |||||  || |||||  |||  |||||| |||||    ||||| ||||||
Sbjct: 657  aggttctcatcgccgtctagtctatcatgtggaatttgctaactgtgcagatgctatggt 716

                                                                        
Query: 626  acaattccttgatggttacgatgccagtctggtgttaattgaaaagctcccaagaggtgt 685
              | |||||||||   || ||||||| ||||||| |||| ||||| ||||| |  |||||
Sbjct: 717  taatttccttgataactatgatgccaatctggtggtaatagaaaatctcccgaatggtgt 776

                                                                        
Query: 686  attcgccgacccatttgagctgcagcactttgttgagcggaaagtttttcttgatgttgc 745
             || || |||||||||||||| || || ||||||||||||||||| | ||||||| | | 
Sbjct: 777  gtttgctgacccatttgagctacaacattttgttgagcggaaagtatatcttgatatggt 836

                                                                        
Query: 746  tgtttttggagacacaaaccttgaactgccctctgccctgtccaactggtcagctgttga 805
            |||||| |||||||| |||||||||||||| || || || |||||| ||||| |||| ||
Sbjct: 837  tgttttcggagacaccaaccttgaactgccttcggctctatccaaccggtcatctgtgga 896

                                                                        
Query: 806  gattcattttgatctcaagccaagcacatcaatgggctataaccttgtaatagagcttcc 865
             || ||| ||||||||   |||    |||| |||  || ||||||||||||||| || ||
Sbjct: 897  aatccatgttgatctcgcaccacttgcatcgatgaactgtaaccttgtaatagacctgcc 956

                                                                        
Query: 866  tctccatgctagatatccacctcttgatgccagcgattatgcaacggttgagtttggcag 925
            ||||||||||||||| ||||||||||||||||| | |||||| |||||||||||||| ||
Sbjct: 957  tctccatgctagatacccacctcttgatgccagtggttatgcgacggttgagtttggtag 1016

                                    
Query: 926  cccagacctgctcctacgttacag 949
            |||||| ||||| |||||||||||
Sbjct: 1017 cccagatctgcttctacgttacag 1040



 Score = 95.6 bits (48), Expect = 4e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1011 gtggagaaagccgcatggcgcataccctgtggcgacaaagcgcacacaggatttgtatct 1070
            |||||||||||  ||||||||||||||||||| ||| ||||||||| |||||||||||||
Sbjct: 1102 gtggagaaagctacatggcgcataccctgtggagacgaagcgcacataggatttgtatct 1161

                                            
Query: 1071 agcctcactttcatttcggctctggtttgctc 1102
            ||  |||||||  |||| ||||| ||||||||
Sbjct: 1162 agtatcacttttctttcagctctagtttgctc 1193



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>gb|AY111505.1| Zea mays CL34739_1 mRNA sequence
          Length = 635

 Score =  103 bits (52), Expect = 2e-18
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                        
Query: 1012 tggagaaagccgcatggcgcataccctgtggcgacaaagcgcacacaggatttgtatcta 1071
            |||||||||| |||||||||||||||||||| ||| | || |||| ||||||||||||||
Sbjct: 379  tggagaaagctgcatggcgcataccctgtggagacgaggcccacataggatttgtatcta 320

                                                    
Query: 1072 gcctcactttcatttcggctctggtttgctccatgtccat 1111
            || |||| ||  |||| ||||| |||||||||||||||||
Sbjct: 319  gcatcacgtttctttcagctcttgtttgctccatgtccat 280



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 95.6 bits (48), Expect = 4e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                            
Query: 1011     gtggagaaagccgcatggcgcataccctgtggcgacaaagcgcacacaggatttgtatct 1070
                |||||||||||  ||||||||||||||||||| ||| ||||||||| |||||||||||||
Sbjct: 25094146 gtggagaaagctacatggcgcataccctgtggagacgaagcgcacataggatttgtatct 25094205

                                                
Query: 1071     agcctcactttcatttcggctctggtttgctc 1102
                ||  |||||||  |||| ||||| ||||||||
Sbjct: 25094206 agtatcacttttctttcagctctagtttgctc 25094237



 Score = 81.8 bits (41), Expect = 6e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                            
Query: 885      cctcttgatgccagcgattatgcaacggttgagtttggcagcccagacctgctcctacgt 944
                |||||||||||||| | |||||| |||||||||||||| |||||||| ||||| ||||||
Sbjct: 25094020 cctcttgatgccagtggttatgcgacggttgagtttggtagcccagatctgcttctacgt 25094079

                     
Query: 945      tacag 949
                |||||
Sbjct: 25094080 tacag 25094084



 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 224/284 (78%), Gaps = 2/284 (0%)
 Strand = Plus / Plus

                                                                            
Query: 447      cagctttctcaacatcgtgacttgaccgaagtacctgataccgctgacttgtgtaaagga 506
                |||||| ||||||||||||||||||| |||  | ||||| | |||||||  || ||||||
Sbjct: 25091765 cagcttgctcaacatcgtgacttgactgaaacatctgattctgctgactcatgcaaagga 25091824

                                                                            
Query: 507      cttgctgatgaacttgatgtgcctgcgctttcagaagtgca-tcgtcagctggtgggtga 565
                |||| | |||| |||||||  ||   |||| ||||| |||| |||  | ||||| |||||
Sbjct: 25091825 cttgattatgatcttgatgcacccatgcttacagaattgcactcggaa-ctggttggtga 25091883

                                                                            
Query: 566      aggttcccaccgccgcttaatctattctgttaaatttggtaactccaaagatggtatggt 625
                |||||| || |||||  || |||||  |||  |||||| |||||    ||||| ||||||
Sbjct: 25091884 aggttctcatcgccgtctagtctatcatgtggaatttgctaactgtgcagatgctatggt 25091943

                                                                            
Query: 626      acaattccttgatggttacgatgccagtctggtgttaattgaaaagctcccaagaggtgt 685
                  | |||||||||   || ||||||| ||||||| |||| ||||| ||||| |  |||||
Sbjct: 25091944 taatttccttgataactatgatgccaatctggtggtaatagaaaatctcccgaatggtgt 25092003

                                                            
Query: 686      attcgccgacccatttgagctgcagcactttgttgagcggaaag 729
                 || || |||||||||||||| || || ||||||||||||||||
Sbjct: 25092004 gtttgctgacccatttgagctacaacattttgttgagcggaaag 25092047



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 110/135 (81%)
 Strand = Plus / Plus

                                                                            
Query: 746      tgtttttggagacacaaaccttgaactgccctctgccctgtccaactggtcagctgttga 805
                |||||| |||||||| |||||||||||||| || || || |||||| ||||| |||| ||
Sbjct: 25092148 tgttttcggagacaccaaccttgaactgccttcggctctatccaaccggtcatctgtgga 25092207

                                                                            
Query: 806      gattcattttgatctcaagccaagcacatcaatgggctataaccttgtaatagagcttcc 865
                 || ||| ||||||||   |||    |||| |||  || ||||||||||||||| || ||
Sbjct: 25092208 aatccatgttgatctcgcaccacttgcatcgatgaactgtaaccttgtaatagacctgcc 25092267

                               
Query: 866      tctccatgctagata 880
                |||||||||||||||
Sbjct: 25092268 tctccatgctagata 25092282



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>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 121563

 Score = 95.6 bits (48), Expect = 4e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                         
Query: 1011  gtggagaaagccgcatggcgcataccctgtggcgacaaagcgcacacaggatttgtatct 1070
             |||||||||||  ||||||||||||||||||| ||| ||||||||| |||||||||||||
Sbjct: 37333 gtggagaaagctacatggcgcataccctgtggagacgaagcgcacataggatttgtatct 37274

                                             
Query: 1071  agcctcactttcatttcggctctggtttgctc 1102
             ||  |||||||  |||| ||||| ||||||||
Sbjct: 37273 agtatcacttttctttcagctctagtttgctc 37242



 Score = 81.8 bits (41), Expect = 6e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 885   cctcttgatgccagcgattatgcaacggttgagtttggcagcccagacctgctcctacgt 944
             |||||||||||||| | |||||| |||||||||||||| |||||||| ||||| ||||||
Sbjct: 37459 cctcttgatgccagtggttatgcgacggttgagtttggtagcccagatctgcttctacgt 37400

                  
Query: 945   tacag 949
             |||||
Sbjct: 37399 tacag 37395



 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 224/284 (78%), Gaps = 2/284 (0%)
 Strand = Plus / Minus

                                                                         
Query: 447   cagctttctcaacatcgtgacttgaccgaagtacctgataccgctgacttgtgtaaagga 506
             |||||| ||||||||||||||||||| |||  | ||||| | |||||||  || ||||||
Sbjct: 39714 cagcttgctcaacatcgtgacttgactgaaacatctgattctgctgactcatgcaaagga 39655

                                                                         
Query: 507   cttgctgatgaacttgatgtgcctgcgctttcagaagtgca-tcgtcagctggtgggtga 565
             |||| | |||| |||||||  ||   |||| ||||| |||| |||  | ||||| |||||
Sbjct: 39654 cttgattatgatcttgatgcacccatgcttacagaattgcactcggaa-ctggttggtga 39596

                                                                         
Query: 566   aggttcccaccgccgcttaatctattctgttaaatttggtaactccaaagatggtatggt 625
             |||||| || |||||  || |||||  |||  |||||| |||||    ||||| ||||||
Sbjct: 39595 aggttctcatcgccgtctagtctatcatgtggaatttgctaactgtgcagatgctatggt 39536

                                                                         
Query: 626   acaattccttgatggttacgatgccagtctggtgttaattgaaaagctcccaagaggtgt 685
               | |||||||||   || ||||||| ||||||| |||| ||||| ||||| |  |||||
Sbjct: 39535 taatttccttgataactatgatgccaatctggtggtaatagaaaatctcccgaatggtgt 39476

                                                         
Query: 686   attcgccgacccatttgagctgcagcactttgttgagcggaaag 729
              || || |||||||||||||| || || ||||||||||||||||
Sbjct: 39475 gtttgctgacccatttgagctacaacattttgttgagcggaaag 39432



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 110/135 (81%)
 Strand = Plus / Minus

                                                                         
Query: 746   tgtttttggagacacaaaccttgaactgccctctgccctgtccaactggtcagctgttga 805
             |||||| |||||||| |||||||||||||| || || || |||||| ||||| |||| ||
Sbjct: 39331 tgttttcggagacaccaaccttgaactgccttcggctctatccaaccggtcatctgtgga 39272

                                                                         
Query: 806   gattcattttgatctcaagccaagcacatcaatgggctataaccttgtaatagagcttcc 865
              || ||| ||||||||   |||    |||| |||  || ||||||||||||||| || ||
Sbjct: 39271 aatccatgttgatctcgcaccacttgcatcgatgaactgtaaccttgtaatagacctgcc 39212

                            
Query: 866   tctccatgctagata 880
             |||||||||||||||
Sbjct: 39211 tctccatgctagata 39197



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>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146686

 Score = 95.6 bits (48), Expect = 4e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                         
Query: 1011  gtggagaaagccgcatggcgcataccctgtggcgacaaagcgcacacaggatttgtatct 1070
             |||||||||||  ||||||||||||||||||| ||| ||||||||| |||||||||||||
Sbjct: 13051 gtggagaaagctacatggcgcataccctgtggagacgaagcgcacataggatttgtatct 12992

                                             
Query: 1071  agcctcactttcatttcggctctggtttgctc 1102
             ||  |||||||  |||| ||||| ||||||||
Sbjct: 12991 agtatcacttttctttcagctctagtttgctc 12960



 Score = 81.8 bits (41), Expect = 6e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 885   cctcttgatgccagcgattatgcaacggttgagtttggcagcccagacctgctcctacgt 944
             |||||||||||||| | |||||| |||||||||||||| |||||||| ||||| ||||||
Sbjct: 13177 cctcttgatgccagtggttatgcgacggttgagtttggtagcccagatctgcttctacgt 13118

                  
Query: 945   tacag 949
             |||||
Sbjct: 13117 tacag 13113



 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 224/284 (78%), Gaps = 2/284 (0%)
 Strand = Plus / Minus

                                                                         
Query: 447   cagctttctcaacatcgtgacttgaccgaagtacctgataccgctgacttgtgtaaagga 506
             |||||| ||||||||||||||||||| |||  | ||||| | |||||||  || ||||||
Sbjct: 15406 cagcttgctcaacatcgtgacttgactgaaacatctgattctgctgactcatgcaaagga 15347

                                                                         
Query: 507   cttgctgatgaacttgatgtgcctgcgctttcagaagtgca-tcgtcagctggtgggtga 565
             |||| | |||| |||||||  ||   |||| ||||| |||| |||  | ||||| |||||
Sbjct: 15346 cttgattatgatcttgatgcacccatgcttacagaattgcactcggaa-ctggttggtga 15288

                                                                         
Query: 566   aggttcccaccgccgcttaatctattctgttaaatttggtaactccaaagatggtatggt 625
             |||||| || |||||  || |||||  |||  |||||| |||||    ||||| ||||||
Sbjct: 15287 aggttctcatcgccgtctagtctatcatgtggaatttgctaactgtgcagatgctatggt 15228

                                                                         
Query: 626   acaattccttgatggttacgatgccagtctggtgttaattgaaaagctcccaagaggtgt 685
               | |||||||||   || ||||||| ||||||| |||| ||||| ||||| |  |||||
Sbjct: 15227 taatttccttgataactatgatgccaatctggtggtaatagaaaatctcccgaatggtgt 15168

                                                         
Query: 686   attcgccgacccatttgagctgcagcactttgttgagcggaaag 729
              || || |||||||||||||| || || ||||||||||||||||
Sbjct: 15167 gtttgctgacccatttgagctacaacattttgttgagcggaaag 15124



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 110/135 (81%)
 Strand = Plus / Minus

                                                                         
Query: 746   tgtttttggagacacaaaccttgaactgccctctgccctgtccaactggtcagctgttga 805
             |||||| |||||||| |||||||||||||| || || || |||||| ||||| |||| ||
Sbjct: 15023 tgttttcggagacaccaaccttgaactgccttcggctctatccaaccggtcatctgtgga 14964

                                                                         
Query: 806   gattcattttgatctcaagccaagcacatcaatgggctataaccttgtaatagagcttcc 865
              || ||| ||||||||   |||    |||| |||  || ||||||||||||||| || ||
Sbjct: 14963 aatccatgttgatctcgcaccacttgcatcgatgaactgtaaccttgtaatagacctgcc 14904

                            
Query: 866   tctccatgctagata 880
             |||||||||||||||
Sbjct: 14903 tctccatgctagata 14889



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>ref|NM_001048682.1| Oryza sativa (japonica cultivar-group) Os01g0171200 (Os01g0171200)
           mRNA, partial cds
          Length = 2936

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 303 ctcgccgtggcgcttctcgccgccgc 328
           ||||||||||||||||||||||||||
Sbjct: 75  ctcgccgtggcgcttctcgccgccgc 100



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                         
Query: 303     ctcgccgtggcgcttctcgccgccgc 328
               ||||||||||||||||||||||||||
Sbjct: 3686335 ctcgccgtggcgcttctcgccgccgc 3686310



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>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0583G08
          Length = 135295

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 303   ctcgccgtggcgcttctcgccgccgc 328
             ||||||||||||||||||||||||||
Sbjct: 94815 ctcgccgtggcgcttctcgccgccgc 94790



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>dbj|AK109475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-D02, full
           insert sequence
          Length = 2936

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 303 ctcgccgtggcgcttctcgccgccgc 328
           ||||||||||||||||||||||||||
Sbjct: 75  ctcgccgtggcgcttctcgccgccgc 100



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>dbj|AK107515.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-F03, full
           insert sequence
          Length = 1694

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 303 ctcgccgtggcgcttctcgccgccgc 328
           ||||||||||||||||||||||||||
Sbjct: 73  ctcgccgtggcgcttctcgccgccgc 98



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>gb|AC115067.7| Mus musculus chromosome 5, clone RP24-404B4, complete sequence
          Length = 163303

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1115  cctagcagcttccctgactcct 1136
             ||||||||||||||||||||||
Sbjct: 75236 cctagcagcttccctgactcct 75257



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>gb|AC160126.2| Mus musculus BAC clone RP23-295C1 from chromosome 13, complete sequence
          Length = 212570

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 785   gtccaactggtcagctgttgagattc 810
             ||||||| ||||||||||||||||||
Sbjct: 34737 gtccaaccggtcagctgttgagattc 34762



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>gb|AC109311.12| Mus musculus chromosome 5, clone RP23-42K10, complete sequence
          Length = 191698

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1115 cctagcagcttccctgactcct 1136
            ||||||||||||||||||||||
Sbjct: 4689 cctagcagcttccctgactcct 4668



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>dbj|AK139425.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched
            library, clone:A830073O18 product:Hypothetical ARM repeat
            structure containing protein, full insert sequence
          Length = 3653

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 661  taattgaaaagctcccaagagg 682
            ||||||||||||||||||||||
Sbjct: 3591 taattgaaaagctcccaagagg 3570



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>dbj|AK161965.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430585I19
           product:unclassifiable, full insert sequence
          Length = 1590

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 661 taattgaaaagctcccaagagg 682
           ||||||||||||||||||||||
Sbjct: 971 taattgaaaagctcccaagagg 950



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>gb|AC109163.16| Mus musculus chromosome 8, clone RP24-174F12, complete sequence
          Length = 189849

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 661    taattgaaaagctcccaagagg 682
              ||||||||||||||||||||||
Sbjct: 147752 taattgaaaagctcccaagagg 147731



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>emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chromosome 13, complete
             sequence
          Length = 231247

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 785   gtccaactggtcagctgttgagattc 810
             ||||||| ||||||||||||||||||
Sbjct: 89287 gtccaaccggtcagctgttgagattc 89312



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>ref|NM_001068826.1| Oryza sativa (japonica cultivar-group) Os08g0525500 (Os08g0525500)
           mRNA, complete cds
          Length = 1063

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 304 tcgccgtggcgcttctcgccg 324
           |||||||||||||||||||||
Sbjct: 107 tcgccgtggcgcttctcgccg 127



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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 221     cggcgcccttccccggtcgtt 241
               |||||||||||||||||||||
Sbjct: 2802135 cggcgcccttccccggtcgtt 2802115



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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 360     caggcacacggcagccagcaa 380
               |||||||||||||||||||||
Sbjct: 2203996 caggcacacggcagccagcaa 2204016



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>gb|AC154740.2| Mus musculus BAC clone RP23-118I16 from chromosome 9, complete sequence
          Length = 222313

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1123   cttccctgactccttgatgca 1143
              |||||||||||||||||||||
Sbjct: 187792 cttccctgactccttgatgca 187772



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>gb|AC159547.4| Mus musculus 6 BAC RP23-235P6 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 204498

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 655  tggtgttaattgaaaagctcc 675
            |||||||||||||||||||||
Sbjct: 6101 tggtgttaattgaaaagctcc 6121



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>ref|XM_798381.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509637.9) partial mRNA
          Length = 577

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 244 tggcccctctcccgttcttct 264
           |||||||||||||||||||||
Sbjct: 140 tggcccctctcccgttcttct 120



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>ref|XM_814759.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507711.60) partial mRNA
          Length = 2616

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 244  tggcccctctcccgttcttct 264
            |||||||||||||||||||||
Sbjct: 2179 tggcccctctcccgttcttct 2159



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 304      tcgccgtggcgcttctcgccg 324
                |||||||||||||||||||||
Sbjct: 26127712 tcgccgtggcgcttctcgccg 26127732



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>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1191_A10
          Length = 140643

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   tcgccgtggcgcttctcgccg 324
             |||||||||||||||||||||
Sbjct: 71643 tcgccgtggcgcttctcgccg 71663



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>dbj|AK073336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025O03, full
           insert sequence
          Length = 1063

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 304 tcgccgtggcgcttctcgccg 324
           |||||||||||||||||||||
Sbjct: 107 tcgccgtggcgcttctcgccg 127



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>gb|AC153620.4| Mus musculus 6 BAC RP23-326P16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 194383

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 655   tggtgttaattgaaaagctcc 675
             |||||||||||||||||||||
Sbjct: 90945 tggtgttaattgaaaagctcc 90925



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>gb|AC005922.1|AC005922 Homo sapiens chromosome 17, clone hRPK.235_I_10, complete sequence
          Length = 140677

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1066  tatctagcctcactttcattt 1086
             |||||||||||||||||||||
Sbjct: 90301 tatctagcctcactttcattt 90281


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 206,998,880
Number of extensions: 20129368
Number of successful extensions: 217830
Number of sequences better than 10.0: 30
Number of HSP's gapped: 217830
Number of HSP's successfully gapped: 51
Length of query: 1264
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1241
Effective length of database: 18,503,978,556
Effective search space: 22963437387996
Effective search space used: 22963437387996
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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