| Clone Name | FLbaf164c21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT829454.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN031B13, full insert sequence Length = 1088 Score = 289 bits (146), Expect = 1e-74 Identities = 245/278 (88%) Strand = Plus / Plus Query: 399 agccccgaggacttggagaacatacgcgagatcaaaagggtgctggagcttcttcagaag 458 |||||||||||||||||| | || ||| || ||||||||||||| ||||||||||||||| Sbjct: 375 agccccgaggacttggaggatatccgccaggtcaaaagggtgcttgagcttcttcagaag 434 Query: 459 aatagggatatgaccttcggcgaggttaagttaactatcatgattgaggaccctagagat 518 || |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 435 aacagggatatgacctttggcgaggttaagctaactatcatgattgaggatcctagagat 494 Query: 519 gtagaaaggaagagattgctaggcatagaggatcctgaagaacttaccagggatgatcta 578 |||||||||||||||| || ||||||||||||||||| ||| | |||||||||||| | Sbjct: 495 atagaaaggaagagattactcggcatagaggatcctgatgaaatcaccagggatgatttg 554 Query: 579 gctgacgctttggttgaggttaatgaaggacgaattccagagaatcgtgatactcttagg 638 ||||| ||||||||||||||||||||||| || |||||||| || |||| | | ||| | Sbjct: 555 gctgatgctttggttgaggttaatgaaggccggattccagaaaaccgtgttgcccttcag 614 Query: 639 ttgcttgccaaggagatgtcagaatggcccgatgttga 676 |||||||| ||||||||| | |||||||| ||| |||| Sbjct: 615 ttgcttgcgaaggagatgactgaatggccagatcttga 652 Score = 242 bits (122), Expect = 2e-60 Identities = 203/230 (88%) Strand = Plus / Plus Query: 719 atctgtctatgcaaaggccacagatactggcattgatcccgtggcagctgctaaaagact 778 |||||||||||||||||| |||||||| ||||||||||| | | |||||||||||||||| Sbjct: 689 atctgtctatgcaaaggctacagatacaggcattgatcctgagacagctgctaaaagact 748 Query: 779 taacattgactgggattctgctgctgatattgatgaaggagaggatgaggatgatgaaga 838 ||||||||| |||||||||||||||||| | ||||| | |||||| || ||||||||| Sbjct: 749 taacattgattgggattctgctgctgatttggatgatgaagaggaggaagatgatgaaac 808 Query: 839 tgaagttccttcagcagtgggatacggtgctctgtatctgttgacagcctttcctgttat 898 |||||| || || ||||||||||| |||||| |||||||| || ||||||||||| || Sbjct: 809 tgaagtgccctccgcagtgggatattctgctctatatctgttaactgcctttcctgtcat 868 Query: 899 tattggaatatcagtcgtgctgatccttttctacaactctctacagtagt 948 ||||||||||||||||||| |||| ||||||||||| ||||||||||||| Sbjct: 869 tattggaatatcagtcgtgttgattcttttctacaattctctacagtagt 918
>ref|NM_001051059.1| Oryza sativa (japonica cultivar-group) Os01g0798500 (Os01g0798500) mRNA, complete cds Length = 1111 Score = 289 bits (146), Expect = 1e-74 Identities = 245/278 (88%) Strand = Plus / Plus Query: 399 agccccgaggacttggagaacatacgcgagatcaaaagggtgctggagcttcttcagaag 458 |||||||||||||||||| | || ||| || ||||||||||||| ||||||||||||||| Sbjct: 367 agccccgaggacttggaggatatccgccaggtcaaaagggtgcttgagcttcttcagaag 426 Query: 459 aatagggatatgaccttcggcgaggttaagttaactatcatgattgaggaccctagagat 518 || |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 427 aacagggatatgacctttggcgaggttaagctaactatcatgattgaggatcctagagat 486 Query: 519 gtagaaaggaagagattgctaggcatagaggatcctgaagaacttaccagggatgatcta 578 |||||||||||||||| || ||||||||||||||||| ||| | |||||||||||| | Sbjct: 487 atagaaaggaagagattactcggcatagaggatcctgatgaaatcaccagggatgatttg 546 Query: 579 gctgacgctttggttgaggttaatgaaggacgaattccagagaatcgtgatactcttagg 638 ||||| ||||||||||||||||||||||| || |||||||| || |||| | | ||| | Sbjct: 547 gctgatgctttggttgaggttaatgaaggccggattccagaaaaccgtgttgcccttcag 606 Query: 639 ttgcttgccaaggagatgtcagaatggcccgatgttga 676 |||||||| ||||||||| | |||||||| ||| |||| Sbjct: 607 ttgcttgcgaaggagatgactgaatggccagatcttga 644 Score = 242 bits (122), Expect = 2e-60 Identities = 203/230 (88%) Strand = Plus / Plus Query: 719 atctgtctatgcaaaggccacagatactggcattgatcccgtggcagctgctaaaagact 778 |||||||||||||||||| |||||||| ||||||||||| | | |||||||||||||||| Sbjct: 681 atctgtctatgcaaaggctacagatacaggcattgatcctgagacagctgctaaaagact 740 Query: 779 taacattgactgggattctgctgctgatattgatgaaggagaggatgaggatgatgaaga 838 ||||||||| |||||||||||||||||| | ||||| | |||||| || ||||||||| Sbjct: 741 taacattgattgggattctgctgctgatttggatgatgaagaggaggaagatgatgaaac 800 Query: 839 tgaagttccttcagcagtgggatacggtgctctgtatctgttgacagcctttcctgttat 898 |||||| || || ||||||||||| |||||| |||||||| || ||||||||||| || Sbjct: 801 tgaagtgccctccgcagtgggatattctgctctatatctgttaactgcctttcctgtcat 860 Query: 899 tattggaatatcagtcgtgctgatccttttctacaactctctacagtagt 948 ||||||||||||||||||| |||| ||||||||||| ||||||||||||| Sbjct: 861 tattggaatatcagtcgtgttgattcttttctacaattctctacagtagt 910
>dbj|AK068219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013138A22, full insert sequence Length = 1112 Score = 289 bits (146), Expect = 1e-74 Identities = 245/278 (88%) Strand = Plus / Plus Query: 399 agccccgaggacttggagaacatacgcgagatcaaaagggtgctggagcttcttcagaag 458 |||||||||||||||||| | || ||| || ||||||||||||| ||||||||||||||| Sbjct: 368 agccccgaggacttggaggatatccgccaggtcaaaagggtgcttgagcttcttcagaag 427 Query: 459 aatagggatatgaccttcggcgaggttaagttaactatcatgattgaggaccctagagat 518 || |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 428 aacagggatatgacctttggcgaggttaagctaactatcatgattgaggatcctagagat 487 Query: 519 gtagaaaggaagagattgctaggcatagaggatcctgaagaacttaccagggatgatcta 578 |||||||||||||||| || ||||||||||||||||| ||| | |||||||||||| | Sbjct: 488 atagaaaggaagagattactcggcatagaggatcctgatgaaatcaccagggatgatttg 547 Query: 579 gctgacgctttggttgaggttaatgaaggacgaattccagagaatcgtgatactcttagg 638 ||||| ||||||||||||||||||||||| || |||||||| || |||| | | ||| | Sbjct: 548 gctgatgctttggttgaggttaatgaaggccggattccagaaaaccgtgttgcccttcag 607 Query: 639 ttgcttgccaaggagatgtcagaatggcccgatgttga 676 |||||||| ||||||||| | |||||||| ||| |||| Sbjct: 608 ttgcttgcgaaggagatgactgaatggccagatcttga 645 Score = 242 bits (122), Expect = 2e-60 Identities = 203/230 (88%) Strand = Plus / Plus Query: 719 atctgtctatgcaaaggccacagatactggcattgatcccgtggcagctgctaaaagact 778 |||||||||||||||||| |||||||| ||||||||||| | | |||||||||||||||| Sbjct: 682 atctgtctatgcaaaggctacagatacaggcattgatcctgagacagctgctaaaagact 741 Query: 779 taacattgactgggattctgctgctgatattgatgaaggagaggatgaggatgatgaaga 838 ||||||||| |||||||||||||||||| | ||||| | |||||| || ||||||||| Sbjct: 742 taacattgattgggattctgctgctgatttggatgatgaagaggaggaagatgatgaaac 801 Query: 839 tgaagttccttcagcagtgggatacggtgctctgtatctgttgacagcctttcctgttat 898 |||||| || || ||||||||||| |||||| |||||||| || ||||||||||| || Sbjct: 802 tgaagtgccctccgcagtgggatattctgctctatatctgttaactgcctttcctgtcat 861 Query: 899 tattggaatatcagtcgtgctgatccttttctacaactctctacagtagt 948 ||||||||||||||||||| |||| ||||||||||| ||||||||||||| Sbjct: 862 tattggaatatcagtcgtgttgattcttttctacaattctctacagtagt 911
>dbj|AK061244.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-D07, full insert sequence Length = 1036 Score = 242 bits (122), Expect = 2e-60 Identities = 203/230 (88%) Strand = Plus / Plus Query: 719 atctgtctatgcaaaggccacagatactggcattgatcccgtggcagctgctaaaagact 778 |||||||||||||||||| |||||||| ||||||||||| | | |||||||||||||||| Sbjct: 622 atctgtctatgcaaaggctacagatacaggcattgatcctgagacagctgctaaaagact 681 Query: 779 taacattgactgggattctgctgctgatattgatgaaggagaggatgaggatgatgaaga 838 ||||||||| |||||||||||||||||| | ||||| | |||||| || ||||||||| Sbjct: 682 taacattgattgggattctgctgctgatttggatgatgaagaggaggaagatgatgaaac 741 Query: 839 tgaagttccttcagcagtgggatacggtgctctgtatctgttgacagcctttcctgttat 898 |||||| || || ||||||||||| |||||| |||||||| || ||||||||||| || Sbjct: 742 tgaagtgccctccgcagtgggatattctgctctatatctgttaactgcctttcctgtcat 801 Query: 899 tattggaatatcagtcgtgctgatccttttctacaactctctacagtagt 948 ||||||||||||||||||| |||| ||||||||||| ||||||||||||| Sbjct: 802 tattggaatatcagtcgtgttgattcttttctacaattctctacagtagt 851 Score = 192 bits (97), Expect = 2e-45 Identities = 172/197 (87%) Strand = Plus / Plus Query: 480 gaggttaagttaactatcatgattgaggaccctagagatgtagaaaggaagagattgcta 539 ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| || Sbjct: 389 gaggttaagctaactatcatgattgaggatcctagagatatagaaaggaagagattactc 448 Query: 540 ggcatagaggatcctgaagaacttaccagggatgatctagctgacgctttggttgaggtt 599 ||||||||||||||||| ||| | |||||||||||| | ||||| ||||||||||||||| Sbjct: 449 ggcatagaggatcctgatgaaatcaccagggatgatttggctgatgctttggttgaggtt 508 Query: 600 aatgaaggacgaattccagagaatcgtgatactcttaggttgcttgccaaggagatgtca 659 |||||||| || |||||||| || |||| | | ||| ||||||||| ||||||||| | Sbjct: 509 aatgaaggccggattccagaaaaccgtgttgcccttcagttgcttgcgaaggagatgact 568 Query: 660 gaatggcccgatgttga 676 |||||||| ||| |||| Sbjct: 569 gaatggccagatcttga 585
>gb|AY107683.1| Zea mays PCO091280 mRNA sequence Length = 1059 Score = 242 bits (122), Expect = 2e-60 Identities = 242/282 (85%) Strand = Plus / Plus Query: 386 gccggcggacgccagccccgaggacttggagaacatacgcgagatcaaaagggtgctgga 445 ||||||||| || ||||| |||||| |||||||||| ||||| || |||||||| ||||| Sbjct: 377 gccggcggaggcgagcccggaggacctggagaacatccgcgaaattaaaagggtactgga 436 Query: 446 gcttcttcagaagaatagggatatgaccttcggcgaggttaagttaactatcatgattga 505 ||| || ||||||| || || |||||||| |||||||||||| | || ||||||||||| Sbjct: 437 gctgctgaagaagaacagagacatgacctttggcgaggttaagcttaccatcatgattga 496 Query: 506 ggaccctagagatgtagaaaggaagagattgctaggcatagaggatcctgaagaacttac 565 ||||||||||||| ||||||| |||||| || || |||||||||||||| ||| |||| Sbjct: 497 ggaccctagagatatagaaagaaagagaacactcgggatagaggatcctgatgaaattac 556 Query: 566 cagggatgatctagctgacgctttggttgaggttaatgaaggacgaattccagagaatcg 625 ||||||||| ||||||||||||||| ||||||||| |||||| |||||||||||||| Sbjct: 557 tagggatgatttagctgacgctttggctgaggttaacgaaggaaagattccagagaatcg 616 Query: 626 tgatactcttaggttgcttgccaaggagatgtcagaatggcc 667 || | | ||| ||||||||||||||||||| |||||||||| Sbjct: 617 tgttgcacttcagttgcttgccaaggagatggcagaatggcc 658 Score = 208 bits (105), Expect = 3e-50 Identities = 198/229 (86%) Strand = Plus / Plus Query: 719 atctgtctatgcaaaggccacagatactggcattgatcccgtggcagctgctaaaagact 778 ||||||||||||||| ||||||||||||||||| ||||| | | |||||||||||||||| Sbjct: 704 atctgtctatgcaaaagccacagatactggcatcgatcctgagacagctgctaaaagact 763 Query: 779 taacattgactgggattctgctgctgatattgatgaaggagaggatgaggatgatgaaga 838 |||| |||||||||| |||||||||||||| |||| | |||||| || ||||||||| Sbjct: 764 taaccttgactgggactctgctgctgatatagatggcgaagaggaggacgatgatgaaac 823 Query: 839 tgaagttccttcagcagtgggatacggtgctctgtatctgttgacagcctttcctgttat 898 |||||| || || ||||||||||| ||||| ||||| |||||||||| ||||| ||||| Sbjct: 824 tgaagtgccgtctgcagtgggatatggtgccttgtatttgttgacagcttttccggttat 883 Query: 899 tattggaatatcagtcgtgctgatccttttctacaactctctacagtag 947 |||||| || |||||||| || || ||||||||||| ||||| |||||| Sbjct: 884 tattgggatctcagtcgtcctaattcttttctacaattctctgcagtag 932
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 147 bits (74), Expect = 1e-31 Identities = 107/118 (90%) Strand = Plus / Plus Query: 481 aggttaagttaactatcatgattgaggaccctagagatgtagaaaggaagagattgctag 540 |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| || | Sbjct: 33797067 aggttaagctaactatcatgattgaggatcctagagatatagaaaggaagagattactcg 33797126 Query: 541 gcatagaggatcctgaagaacttaccagggatgatctagctgacgctttggttgaggt 598 |||||||||||||||| ||| | |||||||||||| | ||||| |||||||||||||| Sbjct: 33797127 gcatagaggatcctgatgaaatcaccagggatgatttggctgatgctttggttgaggt 33797184 Score = 143 bits (72), Expect = 2e-30 Identities = 123/140 (87%) Strand = Plus / Plus Query: 719 atctgtctatgcaaaggccacagatactggcattgatcccgtggcagctgctaaaagact 778 |||||||||||||||||| |||||||| ||||||||||| | | |||||||||||||||| Sbjct: 33798073 atctgtctatgcaaaggctacagatacaggcattgatcctgagacagctgctaaaagact 33798132 Query: 779 taacattgactgggattctgctgctgatattgatgaaggagaggatgaggatgatgaaga 838 ||||||||| |||||||||||||||||| | ||||| | |||||| || ||||||||| Sbjct: 33798133 taacattgattgggattctgctgctgatttggatgatgaagaggaggaagatgatgaaac 33798192 Query: 839 tgaagttccttcagcagtgg 858 |||||| || || ||||||| Sbjct: 33798193 tgaagtgccctccgcagtgg 33798212 Score = 109 bits (55), Expect = 2e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 866 tgctctgtatctgttgacagcctttcctgttattattggaatatcagtcgtgctgatcct 925 |||||| |||||||| || ||||||||||| ||||||||||||||||||||| |||| || Sbjct: 33798361 tgctctatatctgttaactgcctttcctgtcattattggaatatcagtcgtgttgattct 33798420 Query: 926 tttctacaactctctacagtagt 948 ||||||||| ||||||||||||| Sbjct: 33798421 tttctacaattctctacagtagt 33798443 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 437 ggtgctggagcttcttcagaagaatagggatatgaccttcggcgaggt 484 |||||| ||||||||||||||||| |||||||||||||| |||||||| Sbjct: 33796925 ggtgcttgagcttcttcagaagaacagggatatgacctttggcgaggt 33796972 Score = 52.0 bits (26), Expect = 0.005 Identities = 68/82 (82%) Strand = Plus / Plus Query: 595 aggttaatgaaggacgaattccagagaatcgtgatactcttaggttgcttgccaaggaga 654 ||||||||||||| || |||||||| || |||| | | ||| ||||||||| ||||||| Sbjct: 33797677 aggttaatgaaggccggattccagaaaaccgtgttgcccttcagttgcttgcgaaggaga 33797736 Query: 655 tgtcagaatggcccgatgttga 676 || | |||||||| ||| |||| Sbjct: 33797737 tgactgaatggccagatcttga 33797758 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 399 agccccgaggacttggagaacatacgcgagatcaaaagggt 439 |||||||||||||||||| | || ||| || |||||||||| Sbjct: 33796786 agccccgaggacttggaggatatccgccaggtcaaaagggt 33796826
>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0691E06 Length = 166497 Score = 147 bits (74), Expect = 1e-31 Identities = 107/118 (90%) Strand = Plus / Plus Query: 481 aggttaagttaactatcatgattgaggaccctagagatgtagaaaggaagagattgctag 540 |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| || | Sbjct: 36114 aggttaagctaactatcatgattgaggatcctagagatatagaaaggaagagattactcg 36173 Query: 541 gcatagaggatcctgaagaacttaccagggatgatctagctgacgctttggttgaggt 598 |||||||||||||||| ||| | |||||||||||| | ||||| |||||||||||||| Sbjct: 36174 gcatagaggatcctgatgaaatcaccagggatgatttggctgatgctttggttgaggt 36231 Score = 143 bits (72), Expect = 2e-30 Identities = 123/140 (87%) Strand = Plus / Plus Query: 719 atctgtctatgcaaaggccacagatactggcattgatcccgtggcagctgctaaaagact 778 |||||||||||||||||| |||||||| ||||||||||| | | |||||||||||||||| Sbjct: 37120 atctgtctatgcaaaggctacagatacaggcattgatcctgagacagctgctaaaagact 37179 Query: 779 taacattgactgggattctgctgctgatattgatgaaggagaggatgaggatgatgaaga 838 ||||||||| |||||||||||||||||| | ||||| | |||||| || ||||||||| Sbjct: 37180 taacattgattgggattctgctgctgatttggatgatgaagaggaggaagatgatgaaac 37239 Query: 839 tgaagttccttcagcagtgg 858 |||||| || || ||||||| Sbjct: 37240 tgaagtgccctccgcagtgg 37259 Score = 109 bits (55), Expect = 2e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 866 tgctctgtatctgttgacagcctttcctgttattattggaatatcagtcgtgctgatcct 925 |||||| |||||||| || ||||||||||| ||||||||||||||||||||| |||| || Sbjct: 37408 tgctctatatctgttaactgcctttcctgtcattattggaatatcagtcgtgttgattct 37467 Query: 926 tttctacaactctctacagtagt 948 ||||||||| ||||||||||||| Sbjct: 37468 tttctacaattctctacagtagt 37490 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 437 ggtgctggagcttcttcagaagaatagggatatgaccttcggcgaggt 484 |||||| ||||||||||||||||| |||||||||||||| |||||||| Sbjct: 35972 ggtgcttgagcttcttcagaagaacagggatatgacctttggcgaggt 36019 Score = 52.0 bits (26), Expect = 0.005 Identities = 68/82 (82%) Strand = Plus / Plus Query: 595 aggttaatgaaggacgaattccagagaatcgtgatactcttaggttgcttgccaaggaga 654 ||||||||||||| || |||||||| || |||| | | ||| ||||||||| ||||||| Sbjct: 36724 aggttaatgaaggccggattccagaaaaccgtgttgcccttcagttgcttgcgaaggaga 36783 Query: 655 tgtcagaatggcccgatgttga 676 || | |||||||| ||| |||| Sbjct: 36784 tgactgaatggccagatcttga 36805 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 399 agccccgaggacttggagaacatacgcgagatcaaaagggt 439 |||||||||||||||||| | || ||| || |||||||||| Sbjct: 35833 agccccgaggacttggaggatatccgccaggtcaaaagggt 35873
>dbj|AK226434.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL06-11-I01 Length = 1148 Score = 58.0 bits (29), Expect = 7e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 444 gagcttcttcagaagaatagggatatgaccttcggcgaggttaagttaactatcatgatt 503 ||||||||| || |||||| ||||||| |||| | ||||||||||| ||||| |||||| Sbjct: 552 gagcttcttaggaggaatagagatatgatcttcagtgaggttaagttgactattatgatt 611 Query: 504 gagga 508 ||||| Sbjct: 612 gagga 616
>dbj|AK228589.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL15-37-O20 Length = 2835 Score = 58.0 bits (29), Expect = 7e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 444 gagcttcttcagaagaatagggatatgaccttcggcgaggttaagttaactatcatgatt 503 ||||||||| || |||||| ||||||| |||| | ||||||||||| ||||| |||||| Sbjct: 543 gagcttcttaggaggaatagagatatgatcttcagtgaggttaagttgactattatgatt 602 Query: 504 gagga 508 ||||| Sbjct: 603 gagga 607
>ref|NM_123832.1| Arabidopsis thaliana unknown protein (AT5G44650) mRNA, complete cds Length = 1201 Score = 58.0 bits (29), Expect = 7e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 444 gagcttcttcagaagaatagggatatgaccttcggcgaggttaagttaactatcatgatt 503 ||||||||| || |||||| ||||||| |||| | ||||||||||| ||||| |||||| Sbjct: 599 gagcttcttaggaggaatagagatatgatcttcagtgaggttaagttgactattatgatt 658 Query: 504 gagga 508 ||||| Sbjct: 659 gagga 663
>gb|AY086105.1| Arabidopsis thaliana clone 21404 mRNA, complete sequence Length = 1201 Score = 58.0 bits (29), Expect = 7e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 444 gagcttcttcagaagaatagggatatgaccttcggcgaggttaagttaactatcatgatt 503 ||||||||| || |||||| ||||||| |||| | ||||||||||| ||||| |||||| Sbjct: 599 gagcttcttaggaggaatagagatatgatcttcagtgaggttaagttgactattatgatt 658 Query: 504 gagga 508 ||||| Sbjct: 659 gagga 663
>gb|BT005748.1| Arabidopsis thaliana clone RAFL15-37-O20 (R50101) Length = 2841 Score = 58.0 bits (29), Expect = 7e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 444 gagcttcttcagaagaatagggatatgaccttcggcgaggttaagttaactatcatgatt 503 ||||||||| || |||||| ||||||| |||| | ||||||||||| ||||| |||||| Sbjct: 543 gagcttcttaggaggaatagagatatgatcttcagtgaggttaagttgactattatgatt 602 Query: 504 gagga 508 ||||| Sbjct: 603 gagga 607
>emb|BX830419.1|CNS0A0AT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB7ZA03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1131 Score = 58.0 bits (29), Expect = 7e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 444 gagcttcttcagaagaatagggatatgaccttcggcgaggttaagttaactatcatgatt 503 ||||||||| || |||||| ||||||| |||| | ||||||||||| ||||| |||||| Sbjct: 582 gagcttcttaggaggaatagagatatgatcttcagtgaggttaagttgactattatgatt 641 Query: 504 gagga 508 ||||| Sbjct: 642 gagga 646
>ref|XM_632862.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0218769) mRNA, complete cds Length = 675 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Minus Query: 813 gaaggagaggatgaggatgatgaagatgaag 843 |||| |||||||||||||||||||||||||| Sbjct: 377 gaagaagaggatgaggatgatgaagatgaag 347 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| ||||||||||||||||||||||||| Sbjct: 411 tgatgaagaggaggatgaggatgatgaagatgaag 377 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Minus Query: 813 gaaggagaggatgaggatgatgaagatgaag 843 |||| ||||||||||||||||||||| |||| Sbjct: 347 gaagaagaggatgaggatgatgaagaagaag 317
>emb|BX088529.6| Zebrafish DNA sequence from clone CH211-286H12, complete sequence Length = 178667 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Minus Query: 813 gaaggagaggatgaggatgatgaaga 838 |||||||||||||||||||||||||| Sbjct: 113882 gaaggagaggatgaggatgatgaaga 113857
>ref|NM_001003487.1| Danio rerio zgc:92038 (zgc:92038), mRNA gb|BC078377.1| Danio rerio zgc:92038, mRNA (cDNA clone MGC:92038 IMAGE:7045268), complete cds Length = 1190 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 813 gaaggagaggatgaggatgatgaaga 838 |||||||||||||||||||||||||| Sbjct: 506 gaaggagaggatgaggatgatgaaga 531
>emb|AL808109.6| Mouse DNA sequence from clone RP23-435P19 on chromosome 4, complete sequence Length = 51860 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Minus Query: 806 tattgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||||||||| |||||||||||| |||| ||||| Sbjct: 17576 tattgatgaaggaggggatgaggatgaagaaggtgaag 17539
>ref|XM_632486.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0218853) mRNA, complete cds Length = 2757 Score = 50.1 bits (25), Expect = 0.018 Identities = 31/33 (93%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 |||||||| ||||||||||||||||||||||| Sbjct: 1398 tgatgaagacgaggatgaggatgatgaagatga 1430
>ref|XR_023317.1| PREDICTED: Pan troglodytes hypothetical LOC464526 (LOC464526), mRNA Length = 865 Score = 48.1 bits (24), Expect = 0.071 Identities = 30/32 (93%) Strand = Plus / Plus Query: 816 ggagaggatgaggatgatgaagatgaagttcc 847 ||||||||||| |||||||| ||||||||||| Sbjct: 482 ggagaggatgatgatgatgatgatgaagttcc 513
>ref|XM_629352.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0191807) mRNA, complete cds Length = 1245 Score = 48.1 bits (24), Expect = 0.071 Identities = 24/24 (100%) Strand = Plus / Minus Query: 818 agaggatgaggatgatgaagatga 841 |||||||||||||||||||||||| Sbjct: 1200 agaggatgaggatgatgaagatga 1177
>ref|XM_686154.1| PREDICTED: Danio rerio similar to Striatin-4 (Zinedin) (LOC562780), partial mRNA Length = 2488 Score = 48.1 bits (24), Expect = 0.071 Identities = 24/24 (100%) Strand = Plus / Plus Query: 818 agaggatgaggatgatgaagatga 841 |||||||||||||||||||||||| Sbjct: 2346 agaggatgaggatgatgaagatga 2369
>emb|BX324136.11| Zebrafish DNA sequence from clone DKEY-31C13 in linkage group 10, complete sequence Length = 255306 Score = 48.1 bits (24), Expect = 0.071 Identities = 24/24 (100%) Strand = Plus / Plus Query: 818 agaggatgaggatgatgaagatga 841 |||||||||||||||||||||||| Sbjct: 229438 agaggatgaggatgatgaagatga 229461
>ref|XM_001007985.1| Tetrahymena thermophila SB210 B-box zinc finger family protein (TTHERM_00000040) mRNA, complete cds Length = 5673 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 813 gaaggagaggatgaggatgatgaagatgaag 843 |||| ||||||||| |||||||||||||||| Sbjct: 2821 gaagaagaggatgacgatgatgaagatgaag 2851
>gb|BC122117.1| Danio rerio cDNA clone IMAGE:7086031 Length = 1459 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 819 gaggatgaggatgatgaagatga 841 ||||||||||||||||||||||| Sbjct: 88 gaggatgaggatgatgaagatga 66
>emb|CR847953.10| Zebrafish DNA sequence from clone CH211-209J10 in linkage group 23, complete sequence Length = 220410 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Minus Query: 815 aggagaggatgaggatgatgaagatga 841 ||||||||| ||||||||||||||||| Sbjct: 164069 aggagaggaagaggatgatgaagatga 164043
>ref|XR_024399.1| PREDICTED: Pan troglodytes similar to novel immunoglobulin domain containing protein (LOC451676), mRNA Length = 3900 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 263 gcaggaagagcctggagtctccg 285 ||||||||||||||||||||||| Sbjct: 2309 gcaggaagagcctggagtctccg 2331
>ref|XM_001154810.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 2 (CIZ1), mRNA Length = 5933 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2404 tgatgaagaagaggaagaggatgatgaggatgaag 2438
>ref|XM_001154341.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 1 (CIZ1), mRNA Length = 3024 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2404 tgatgaagaagaggaagaggatgatgaggatgaag 2438
>ref|XM_001155187.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 8 (CIZ1), mRNA Length = 3278 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2196 tgatgaagaagaggaagaggatgatgaggatgaag 2230
>ref|XM_001155507.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 13 (CIZ1), mRNA Length = 3197 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2115 tgatgaagaagaggaagaggatgatgaggatgaag 2149
>ref|XM_001155570.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 14 (CIZ1), mRNA Length = 3335 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2253 tgatgaagaagaggaagaggatgatgaggatgaag 2287
>ref|XM_001154863.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 3 (CIZ1), mRNA Length = 3246 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2164 tgatgaagaagaggaagaggatgatgaggatgaag 2198
>ref|XM_001154923.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 4 (CIZ1), mRNA Length = 3462 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2404 tgatgaagaagaggaagaggatgatgaggatgaag 2438
>ref|XM_001155136.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 7 (CIZ1), mRNA Length = 3399 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2317 tgatgaagaagaggaagaggatgatgaggatgaag 2351
>ref|XM_001154973.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 5 (CIZ1), mRNA Length = 3359 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2277 tgatgaagaagaggaagaggatgatgaggatgaag 2311
>ref|XM_001155444.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 12 (CIZ1), mRNA Length = 3318 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2236 tgatgaagaagaggaagaggatgatgaggatgaag 2270
>ref|XM_001155382.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 11 (CIZ1), mRNA Length = 3450 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2368 tgatgaagaagaggaagaggatgatgaggatgaag 2402
>ref|XM_001155700.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 16 (CIZ1), mRNA Length = 3527 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2445 tgatgaagaagaggaagaggatgatgaggatgaag 2479
>ref|XM_001155253.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 9 (CIZ1), mRNA Length = 3402 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2320 tgatgaagaagaggaagaggatgatgaggatgaag 2354
>ref|XM_001155316.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 10 (CIZ1), mRNA Length = 3564 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2482 tgatgaagaagaggaagaggatgatgaggatgaag 2516
>ref|XM_001155632.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 15 (CIZ1), mRNA Length = 3471 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2389 tgatgaagaagaggaagaggatgatgaggatgaag 2423
>ref|XM_001155080.1| PREDICTED: Pan troglodytes Cip1-interacting zinc finger protein, transcript variant 6 (CIZ1), mRNA Length = 3416 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2334 tgatgaagaagaggaagaggatgatgaggatgaag 2368
>ref|NW_001091927.1| Theileria annulata strain Ankara clone C9 Length = 1979170 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Minus Query: 813 gaaggagaggatgaggatgatgaagatgaag 843 |||||||||||||| ||||||| |||||||| Sbjct: 28315 gaaggagaggatgaagatgatggagatgaag 28285
>ref|XM_001092487.1| PREDICTED: Macaca mulatta similar to TATA box binding protein-associated factor, RNA polymerase II, Q (LOC702772), mRNA Length = 2358 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatga 841 ||||||||||||||||||||||| Sbjct: 1031 gaggatgaggatgatgaagatga 1053
>gb|BC012773.1| Homo sapiens cDNA clone IMAGE:3837950, **** WARNING: chimeric clone **** Length = 2181 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 582 tgatgaagaagaggaagaggatgatgaggatgaag 616
>ref|XM_637462.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0218000) mRNA, complete cds Length = 6741 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| ||| ||||| |||||||||||||||| Sbjct: 984 tgatgaagaagaagatgatgatgatgaagatgaag 1018
>ref|XM_635542.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0204665) mRNA, complete cds Length = 1224 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| ||| ||||| |||||||||||||||| Sbjct: 1080 tgatgaagaagaagatgaagatgatgaagatgaag 1114
>ref|NM_012127.2| Homo sapiens CDKN1A interacting zinc finger protein 1 (CIZ1), mRNA Length = 3032 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2429 tgatgaagaagaggaagaggatgatgaggatgaag 2463
>gb|AE014831.1| Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete sequence Length = 250195 Score = 46.1 bits (23), Expect = 0.28 Identities = 35/39 (89%) Strand = Plus / Plus Query: 804 gatattgatgaaggagaggatgaggatgatgaagatgaa 842 |||||||| |||| ||| ||||| ||||||||||||||| Sbjct: 207058 gatattgaagaagaagaagatgatgatgatgaagatgaa 207096
>gb|AC115683.2| Dictyostelium discoideum chromosome 2 map complement(6135149-6105997) strain AX4, complete sequence Length = 29150 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Minus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| ||| ||||| |||||||||||||||| Sbjct: 7473 tgatgaagaagaagatgatgatgatgaagatgaag 7439
>gb|BC021163.2| Homo sapiens CDKN1A interacting zinc finger protein 1, mRNA (cDNA clone MGC:16162 IMAGE:3633796), complete cds Length = 2783 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2128 tgatgaagaagaggaagaggatgatgaggatgaag 2162
>gb|BC004119.2| Homo sapiens CDKN1A interacting zinc finger protein 1, mRNA (cDNA clone MGC:1118 IMAGE:3507940), complete cds Length = 2702 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2046 tgatgaagaagaggaagaggatgatgaggatgaag 2080
>gb|AF234161.1| Homo sapiens nuclear protein NP94b (NP94) mRNA, complete cds, alternatively spliced Length = 2508 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 1992 tgatgaagaagaggaagaggatgatgaggatgaag 2026
>gb|AF159025.1| Homo sapiens nuclear protein NP94 mRNA, complete cds Length = 2821 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2221 tgatgaagaagaggaagaggatgatgaggatgaag 2255
>dbj|AK023978.1| Homo sapiens cDNA FLJ13916 fis, clone Y79AA1000342, moderately similar to Homo sapiens Ciz1 mRNA Length = 2858 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2261 tgatgaagaagaggaagaggatgatgaggatgaag 2295
>ref|NM_024885.2| Homo sapiens TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa (TAF7L), mRNA gb|BC043391.1| Homo sapiens TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa, mRNA (cDNA clone MGC:50682 IMAGE:6154641), complete cds Length = 2357 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatga 841 ||||||||||||||||||||||| Sbjct: 1018 gaggatgaggatgatgaagatga 1040
>ref|XM_946668.1| Theileria annulata strain Ankara hypothetical protein (TA16040) partial mRNA Length = 1848 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 813 gaaggagaggatgaggatgatgaagatgaag 843 |||||||||||||| ||||||| |||||||| Sbjct: 1156 gaaggagaggatgaagatgatggagatgaag 1186
>emb|AL590708.18| Human DNA sequence from clone RP11-395P17 on chromosome 9 Contains the PCSCL gene for likely ortholog of rat peroxisomal Ca-dependent solute carrier-like protein (KIAA1896), the PTGES2 gene for prostaglandin E synthase 2 (GBF1, GBF-1, C9orf15, FLJ14038), the LCN2 gene for lipocalin 2 (oncogene 24p3) (NGAL), the C9orf16 gene for chromosome 9 open reading frame 16 (MGC4639, EST00098, FLJ12823), the CIZ1 gene for Cip1-interacting zinc finger protein (LSFR1), the DNM1 gene for dynamin 1 (DNM), the GOLGA2 gene for golgi autoantigen, golgin subfamily a, 2 (GM130, MGC20672), the gene for a novel protein and seven CpG islands, complete sequence Length = 194056 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Minus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 70426 tgatgaagaagaggaagaggatgatgaggatgaag 70392
>ref|XM_688280.1| PREDICTED: Danio rerio similar to estrogen receptor binding protein (LOC564961), mRNA Length = 3249 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 813 gaaggagaggatgaggatgatgaagat 839 |||||||| |||||||||||||||||| Sbjct: 2092 gaaggagatgatgaggatgatgaagat 2118
>emb|AL109801.14|HSJ738A13 Human DNA sequence from clone RP4-738A13 on chromosome Xq21.31-22.1 Contains the 5' end of the TAF7L gene for TAF7-like RNA polymerase II 50kDa TATA box binding protein (TBP)-associated factor and a CpG island, complete sequence Length = 46775 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 819 gaggatgaggatgatgaagatga 841 ||||||||||||||||||||||| Sbjct: 4923 gaggatgaggatgatgaagatga 4901
>ref|NM_001030684.1| Gallus gallus general transcription factor IIIC, polypeptide 5, 63kDa (GTF3C5), mRNA emb|AJ719580.1| Gallus gallus mRNA for hypothetical protein, clone 4a9 Length = 3579 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 816 ggagaggatgaggatgatgaaga 838 ||||||||||||||||||||||| Sbjct: 2862 ggagaggatgaggatgatgaaga 2884
>gb|AF285595.1|AF285595 Homo sapiens TBP-associated factor II Q (TAF2Q) mRNA, complete cds Length = 1576 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatga 841 ||||||||||||||||||||||| Sbjct: 866 gaggatgaggatgatgaagatga 888
>emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in linkage group 8, complete sequence Length = 252440 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 813 gaaggagaggatgaggatgatgaagat 839 |||||||| |||||||||||||||||| Sbjct: 143879 gaaggagatgatgaggatgatgaagat 143905
>gb|AY193437.1| Lactuca saligna genotype PI491204 cDNA1442-like gene, partial sequence Length = 1282 Score = 46.1 bits (23), Expect = 0.28 Identities = 74/91 (81%) Strand = Plus / Plus Query: 726 tatgcaaaggccacagatactggcattgatcccgtggcagctgctaaaagacttaacatt 785 ||||||||||| ||||| ||||| |||||||| | |||||| || || |||||| || Sbjct: 941 tatgcaaaggctacagacactgggattgatccagaattagctgcaaagaggcttaacgtt 1000 Query: 786 gactgggattctgctgctgatattgatgaag 816 ||||||||| | ||||| || ||||| |||| Sbjct: 1001 gactgggatacagctgcagagattgaagaag 1031
>gb|AY193436.1| Lactuca saligna genotype CGN9311 cDNA1442-like gene, partial sequence Length = 1112 Score = 46.1 bits (23), Expect = 0.28 Identities = 74/91 (81%) Strand = Plus / Plus Query: 726 tatgcaaaggccacagatactggcattgatcccgtggcagctgctaaaagacttaacatt 785 ||||||||||| ||||| ||||| |||||||| | |||||| || || |||||| || Sbjct: 939 tatgcaaaggctacagacactgggattgatccagaattagctgcaaagaggcttaacgtt 998 Query: 786 gactgggattctgctgctgatattgatgaag 816 ||||||||| | ||||| || ||||| |||| Sbjct: 999 gactgggatacagctgcagagattgaagaag 1029
>gb|AY193435.1| Lactuca saligna genotype US93UC10 cDNA1442-like gene, partial sequence Length = 1280 Score = 46.1 bits (23), Expect = 0.28 Identities = 74/91 (81%) Strand = Plus / Plus Query: 726 tatgcaaaggccacagatactggcattgatcccgtggcagctgctaaaagacttaacatt 785 ||||||||||| ||||| ||||| |||||||| | |||||| || || |||||| || Sbjct: 939 tatgcaaaggctacagacactgggattgatccagaattagctgcaaagaggcttaacgtt 998 Query: 786 gactgggattctgctgctgatattgatgaag 816 ||||||||| | ||||| || ||||| |||| Sbjct: 999 gactgggatacagctgcagagattgaagaag 1029
>dbj|AP001979.7| Homo sapiens genomic DNA, chromosome 11 clone:RP11-259P6, complete sequence Length = 147533 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 263 gcaggaagagcctggagtctccg 285 ||||||||||||||||||||||| Sbjct: 125301 gcaggaagagcctggagtctccg 125279
>emb|Y17453.1|HOSA17453 Homo sapiens LSFR1 gene, third to fifth of eight identified exons Length = 1642 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 1209 tgatgaagaagaggaagaggatgatgaggatgaag 1243
>dbj|AB030835.1| Homo sapiens Ciz1 mRNA, complete cds Length = 2958 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatgaag 843 |||||||| |||||| ||||||||||| ||||||| Sbjct: 2342 tgatgaagaagaggaagaggatgatgaggatgaag 2376
>ref|XM_424558.2| PREDICTED: Gallus gallus similar to HBV pX associated protein-8; XAP-8 (LOC426947), partial mRNA Length = 1183 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 813 gaaggagaggatgaggatgatgaaga 838 ||||||||||||||||| |||||||| Sbjct: 291 gaaggagaggatgaggaagatgaaga 316
>emb|CT832051.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA058L14, full insert sequence Length = 1122 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 820 aggatgaggatgatgaagatga 841 |||||||||||||||||||||| Sbjct: 866 aggatgaggatgatgaagatga 887
>gb|CP000425.1| Lactococcus lactis subsp. cremoris SK11, complete genome Length = 2438589 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 797 tgctgctgatattgatgaagga 818 |||||||||||||||||||||| Sbjct: 24151 tgctgctgatattgatgaagga 24172
>ref|NM_001061570.1| Oryza sativa (japonica cultivar-group) Os05g0255600 (Os05g0255600) mRNA, complete cds Length = 1335 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 820 aggatgaggatgatgaagatga 841 |||||||||||||||||||||| Sbjct: 873 aggatgaggatgatgaagatga 894
>ref|NM_001055278.1| Oryza sativa (japonica cultivar-group) Os03g0114300 (Os03g0114300) mRNA, complete cds Length = 2901 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 ccgtcggcaccgccgccgcggc 245 |||||||||||||||||||||| Sbjct: 213 ccgtcggcaccgccgccgcggc 192
>ref|XM_940668.2| PREDICTED: Homo sapiens immunoglobulin superfamily, member 9B (IGSF9B), mRNA Length = 7310 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 263 gcaggaagagcctggagtctcc 284 |||||||||||||||||||||| Sbjct: 2538 gcaggaagagcctggagtctcc 2559
>ref|XM_290502.4| PREDICTED: Homo sapiens immunoglobulin superfamily, member 9B (IGSF9B), mRNA Length = 7298 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 263 gcaggaagagcctggagtctcc 284 |||||||||||||||||||||| Sbjct: 2526 gcaggaagagcctggagtctcc 2547
>ref|XM_001087869.1| PREDICTED: Macaca mulatta similar to immunoglobulin superfamily, member 9 (LOC699412), mRNA Length = 4053 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 263 gcaggaagagcctggagtctcc 284 |||||||||||||||||||||| Sbjct: 2309 gcaggaagagcctggagtctcc 2330
>ref|XM_963375.1| PREDICTED: Tribolium castaneum similar to CG11098-PA, isoform A (LOC656875), mRNA Length = 3021 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 799 gatgaggatgatgaagatgaag 820
>ref|XM_631982.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0219277) mRNA, complete cds Length = 3618 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 1675 gatgaggatgatgaagatgaag 1696
>ref|XM_641234.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0190598) mRNA, complete cds Length = 822 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 398 gatgaggatgatgaagatgaag 377
>ref|XM_638172.1| Dictyostelium discoideum AX4 protein serine/threonine kinase (pkgA) mRNA, complete cds Length = 4104 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 810 gatgaaggagaggatgaggatgatga 835 ||||||| |||||||||||||||||| Sbjct: 1522 gatgaagaagaggatgaggatgatga 1547
>ref|XM_635262.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0205134) mRNA, complete cds Length = 2877 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 1544 gatgaggatgatgaagatgaag 1523
>ref|NM_001030674.1| Gallus gallus bromodomain containing 2 (BRD2), mRNA Length = 2517 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 1291 gatgaggatgatgaagatgaag 1312
>ref|NM_001002389.1| Danio rerio zgc:92046 (zgc:92046), mRNA gb|BC076496.1| Danio rerio zgc:92046, mRNA (cDNA clone MGC:92046 IMAGE:7045579), complete cds Length = 2310 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 816 ggagaggatgaggatgatgaagatga 841 |||||||| ||||||||||||||||| Sbjct: 1208 ggagaggaggaggatgatgaagatga 1233
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 820 aggatgaggatgatgaagatga 841 |||||||||||||||||||||| Sbjct: 334773 aggatgaggatgatgaagatga 334794
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11, complete sequence Length = 146677 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 820 aggatgaggatgatgaagatga 841 |||||||||||||||||||||| Sbjct: 107247 aggatgaggatgatgaagatga 107268
>ref|XM_595601.2| PREDICTED: Bos taurus similar to immunoglobulin superfamily, member 9 (LOC517432), mRNA Length = 3714 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 263 gcaggaagagcctggagtctcc 284 |||||||||||||||||||||| Sbjct: 2039 gcaggaagagcctggagtctcc 2060
>ref|NM_012992.2| Rattus norvegicus nucleophosmin 1 (Npm1), mRNA gb|BC060579.1| Rattus norvegicus nucleophosmin 1, mRNA (cDNA clone MGC:72897 IMAGE:6888417), complete cds Length = 1393 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 808 ttgatgaaggagaggatgaggatgatgaagatga 841 ||||||||| || |||||||||||||||||||| Sbjct: 570 ttgatgaagatgatgatgaggatgatgaagatga 603
>ref|XM_658477.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5965.2), mRNA Length = 633 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 818 agaggatgaggatgatgaagatgaag 843 |||||||||||| ||||||||||||| Sbjct: 198 agaggatgaggacgatgaagatgaag 173
>ref|XM_456093.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F22671g predicted mRNA Length = 1401 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 819 gaggatgaggatgatgaagatgaagt 844 ||||||||||| |||||||||||||| Sbjct: 893 gaggatgaggaggatgaagatgaagt 868
>gb|BT013217.1| Lycopersicon esculentum clone 134428R, mRNA sequence Length = 1523 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 1148 gatgaggatgatgaagatgaag 1169
>gb|AC116979.3| Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence Length = 331039 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 810 gatgaaggagaggatgaggatgatga 835 ||||||| |||||||||||||||||| Sbjct: 271739 gatgaagaagaggatgaggatgatga 271764
>ref|NM_012749.1| Rattus norvegicus nucleolin (Ncl), mRNA Length = 2142 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 739 gatgaggatgatgaagatgaag 760
>dbj|AB028953.1| Homo sapiens mRNA for KIAA1030 protein, partial cds Length = 5319 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 263 gcaggaagagcctggagtctcc 284 |||||||||||||||||||||| Sbjct: 548 gcaggaagagcctggagtctcc 569
>ref|XM_822898.1| Trypanosoma brucei TREU927 nucleosome assembly protein (Tb10.61.1330) partial mRNA Length = 1101 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 802 gatgaggatgatgaagatgaag 823
>gb|BC085751.1| Rattus norvegicus nucleolin, mRNA (cDNA clone MGC:93572 IMAGE:7109097), complete cds Length = 2501 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 868 gatgaggatgatgaagatgaag 889
>gb|BC088088.1| Rattus norvegicus nucleophosmin 1, mRNA (cDNA clone MGC:108517 IMAGE:7382200), complete cds Length = 1297 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 808 ttgatgaaggagaggatgaggatgatgaagatga 841 ||||||||| || |||||||||||||||||||| Sbjct: 556 ttgatgaagatgatgatgaggatgatgaagatga 589
>gb|DQ088147.1| Mycoplasma hyopneumoniae F7.2C P146 adhesin like-protein (p146) gene, complete cds Length = 3951 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 818 agaggatgaggatgatgaagatgaag 843 ||||||||| |||||||||||||||| Sbjct: 3201 agaggatgaagatgatgaagatgaag 3176
>gb|AC099617.13| Mus musculus chromosome 15, clone RP23-445J4, complete sequence Length = 180493 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 818 agaggatgaggatgatgaagatgaag 843 ||||||| |||||||||||||||||| Sbjct: 95510 agaggataaggatgatgaagatgaag 95535
>ref|NM_174845.2| Bos taurus vesicle docking protein p115 (VDP), mRNA gb|BC108112.1| Bos taurus vesicle docking protein p115, mRNA (cDNA clone MGC:128739 IMAGE:7988186), complete cds Length = 4130 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 2985 gatgaggatgatgaagatgaag 3006
>ref|NM_063823.2| Caenorhabditis elegans C07E3.2 (C07E3.2) mRNA, complete cds Length = 2307 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 324 gatgaggatgatgaagatgaag 345
>emb|X96669.1|GGRING3GE G.gallus RING3 gene Length = 4651 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 3079 gatgaggatgatgaagatgaag 3100
>emb|Z49908.1|CEC07E3 Caenorhabditis elegans Cosmid C07E3, complete sequence Length = 43815 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 1839 gatgaggatgatgaagatgaag 1818
>emb|CR933520.10| Zebrafish DNA sequence from clone CH211-28A20 in linkage group 8, complete sequence Length = 165296 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 820 aggatgaggatgatgaagatga 841 |||||||||||||||||||||| Sbjct: 152050 aggatgaggatgatgaagatga 152071
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 820 aggatgaggatgatgaagatga 841 |||||||||||||||||||||| Sbjct: 9335302 aggatgaggatgatgaagatga 9335323
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 ccgtcggcaccgccgccgcggc 245 |||||||||||||||||||||| Sbjct: 778590 ccgtcggcaccgccgccgcggc 778569
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaagt 844 ||||||||||| |||||||||||||| Sbjct: 2116038 gaggatgaggaggatgaagatgaagt 2116063 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 |||||||| ||||||||| || ||||||||||| Sbjct: 219924 tgatgaagaagaggatgaagaagatgaagatga 219892
>emb|BX511117.4| Mouse DNA sequence from clone RP23-143C1 on chromosome 11 Contains a basic transcription factor 3 (Btf3) pseudogene, complete sequence Length = 72981 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 816 ggagaggatgaggatgatgaag 837 |||||||||||||||||||||| Sbjct: 14770 ggagaggatgaggatgatgaag 14791
>emb|CR387936.8| Zebrafish DNA sequence from clone CH211-85P6 in linkage group 8, complete sequence Length = 170195 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 820 aggatgaggatgatgaagatga 841 |||||||||||||||||||||| Sbjct: 40525 aggatgaggatgatgaagatga 40546
>gb|AC121609.3| Mus musculus BAC clone RP23-320N4 from chromosome 15, complete sequence Length = 195165 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 818 agaggatgaggatgatgaagatgaag 843 ||||||| |||||||||||||||||| Sbjct: 162606 agaggataaggatgatgaagatgaag 162631
>gb|AC084476.1|CBRG01P23 Caenorhabditis briggsae cosmid G01P23, complete sequence Length = 20422 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 16557 gatgaggatgatgaagatgaag 16536
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 ccgtcggcaccgccgccgcggc 245 |||||||||||||||||||||| Sbjct: 74137 ccgtcggcaccgccgccgcggc 74116
>dbj|AK121970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108H17, full insert sequence Length = 2902 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 ccgtcggcaccgccgccgcggc 245 |||||||||||||||||||||| Sbjct: 214 ccgtcggcaccgccgccgcggc 193
>emb|CR389039.1| Gallus gallus finished cDNA, clone ChEST826a15 Length = 970 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 734 gatgaggatgatgaagatgaag 755
>dbj|AK073067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022A04, full insert sequence Length = 1336 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 820 aggatgaggatgatgaagatga 841 |||||||||||||||||||||| Sbjct: 874 aggatgaggatgatgaagatga 895
>ref|NM_001012067.1| Rattus norvegicus glutamate-rich WD repeat containing 1 (Grwd1), mRNA gb|BC083883.1| Rattus norvegicus glutamate-rich WD repeat containing 1, mRNA (cDNA clone MGC:95187 IMAGE:7131596), complete cds Length = 1958 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 425 gatgaggatgatgaagatgaag 446
>emb|AL023516.3|GGBLOCUS Gallus gallus (chicken) DNA sequence from a contig of cosmids cB12, c4.5 and cBF23. Contains two Butyrophilin like genes, a gene coding for two isoforms of a B locus G (Zipper protein) like protein, genes coding for B locus Lectin like Natural Killer cell surface protein, C type Lectin, TAP Binding Protein (Tapasin) like protein, L Beta chain 1 and 2, M Alpha chain 1, B Beta chain 1 and 2, F Alpha chain 1 and 2, Transport Associated Proteins TAP1 and 2 and complement C4, a Histone H3 like gene, a Leu-tRNA gene and the RING3 kinase gene Length = 92863 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 44089 gatgaggatgatgaagatgaag 44068
>ref|XM_741012.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000769.04.0) partial mRNA Length = 4866 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 816 ggagaggatgaggatgatgaagatga 841 ||||||||||| |||||||||||||| Sbjct: 1006 ggagaggatgatgatgatgaagatga 1031
>gb|U14186.1|BTU14186 Bos taurus general vesicular transport factor p115 mRNA, complete cds Length = 3990 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 2995 gatgaggatgatgaagatgaag 3016
>gb|M55020.1|RATNUCIA3 Rat nucleolin gene Length = 4204 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaag 843 |||||||||||||||||||||| Sbjct: 109 gatgaggatgatgaagatgaag 130
>gb|M37036.1|RATNUCBA2 Rat nucleolar proteins B23.1 and B23.2 Length = 1800 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 808 ttgatgaaggagaggatgaggatgatgaagatga 841 ||||||||| || |||||||||||||||||||| Sbjct: 1570 ttgatgaagatgatgatgaggatgatgaagatga 1603
>gb|J03969.1|RATB23NP Rat nucleolar protein B23 mRNA, complete cds Length = 1232 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 808 ttgatgaaggagaggatgaggatgatgaagatga 841 ||||||||| || |||||||||||||||||||| Sbjct: 519 ttgatgaagatgatgatgaggatgatgaagatga 552
>gb|M25062.1|RATB23B Rat nucleolar protein B23.1 mRNA, complete cds Length = 1232 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 808 ttgatgaaggagaggatgaggatgatgaagatga 841 ||||||||| || |||||||||||||||||||| Sbjct: 519 ttgatgaagatgatgatgaggatgatgaagatga 552
>gb|J04943.1|RATB23A Rat nucleolar protein B23.2 mRNA, complete cds, clone JH2 Length = 1164 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 808 ttgatgaaggagaggatgaggatgatgaagatga 841 ||||||||| || |||||||||||||||||||| Sbjct: 548 ttgatgaagatgatgatgaggatgatgaagatga 581
>ref|XM_001020519.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00218470) mRNA, complete cds Length = 5538 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaa 842 ||||||||||||||||||||| Sbjct: 4594 gatgaggatgatgaagatgaa 4614
>ref|XM_001007909.1| Tetrahymena thermophila SB210 SET domain containing protein (TTHERM_00538850) mRNA, complete cds Length = 10584 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 823 atgaggatgatgaagatgaag 843 ||||||||||||||||||||| Sbjct: 1808 atgaggatgatgaagatgaag 1828
>gb|BC124679.1| Danio rerio cDNA clone IMAGE:5411438 Length = 2883 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||||||||| |||||||||| Sbjct: 1229 gaggatgaggatgaagaagatgaag 1253
>emb|CT954322.9| N.leucogenys DNA sequence from clone CH271-91H2, complete sequence Length = 164667 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 804 gatattgatgaaggagaggatgaggatga 832 ||||||||||||| || |||||||||||| Sbjct: 147974 gatattgatgaagaaggggatgaggatga 148002
>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm Length = 1367119 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cgccgccctccgctccgcccc 90 ||||||||||||||||||||| Sbjct: 666065 cgccgccctccgctccgcccc 666085
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 365 ggtctcggtttccgccgagccgccg 389 ||||||||||||||||||| ||||| Sbjct: 8104268 ggtctcggtttccgccgaggcgccg 8104244
>ref|XM_783009.2| PREDICTED: Strongylocentrotus purpuratus similar to TAF-Ibeta1 (LOC583082), mRNA Length = 3194 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 813 gaaggagaggatgaggatgatgaagatga 841 |||||||||||||| |||||||| ||||| Sbjct: 868 gaaggagaggatgacgatgatgacgatga 896
>ref|XM_001175529.1| PREDICTED: Strongylocentrotus purpuratus similar to TAF-Ibeta1 (LOC583082), mRNA Length = 3194 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 813 gaaggagaggatgaggatgatgaagatga 841 |||||||||||||| |||||||| ||||| Sbjct: 868 gaaggagaggatgacgatgatgacgatga 896
>ref|XM_001138050.1| PREDICTED: Pan troglodytes mediator of RNA polymerase II transcription, subunit 13 homolog (THRAP1), mRNA Length = 10426 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 825 gaggatgatgaagatgaagtt 845 ||||||||||||||||||||| Sbjct: 4673 gaggatgatgaagatgaagtt 4653
>ref|XM_508100.2| PREDICTED: Pan troglodytes C-terminal binding protein 2 (CTBP2), mRNA Length = 7813 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 822 gatgaggatgatgaagatgaa 842 ||||||||||||||||||||| Sbjct: 7715 gatgaggatgatgaagatgaa 7695
>ref|XM_508099.2| PREDICTED: Pan troglodytes zinc finger, RAN-binding domain containing 1 protein (ZRANB1), mRNA Length = 7882 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaa 842 ||||||||||||||||||||| Sbjct: 2800 gatgaggatgatgaagatgaa 2820
>ref|XM_001138784.1| PREDICTED: Pan troglodytes similar to protein phosphatase 2A inhibitor-2 I-2PP2A, transcript variant 2 (LOC737317), mRNA Length = 2654 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 804 gatattgatgaaggagaggatgaggatga 832 ||||||||||||| || |||||||||||| Sbjct: 838 gatattgatgaagaaggggatgaggatga 866
>ref|XM_001138696.1| PREDICTED: Pan troglodytes similar to protein phosphatase 2A inhibitor-2 I-2PP2A, transcript variant 1 (LOC737317), mRNA Length = 2576 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 804 gatattgatgaaggagaggatgaggatga 832 ||||||||||||| || |||||||||||| Sbjct: 760 gatattgatgaagaaggggatgaggatga 788
>ref|XR_023989.1| PREDICTED: Pan troglodytes similar to template acyivating factor-I alpha (LOC460798), mRNA Length = 1841 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 804 gatattgatgaaggagaggatgaggatga 832 ||||||||||||| || |||||||||||| Sbjct: 852 gatattgatgaagaagcggatgaggatga 880
>ref|XR_021371.1| PREDICTED: Pan troglodytes similar to nucleophosmin - human (LOC746483), mRNA Length = 1312 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 |||||||| ||| ||||| |||||||||||||| Sbjct: 591 tgatgaagaagatgatgatgatgatgaagatga 623
>ref|XM_001165371.1| PREDICTED: Pan troglodytes translocated promoter region (to activated MET oncogene), transcript variant 1 (TPR), mRNA Length = 9235 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 |||||||| |||||||||||| ||||| ||||| Sbjct: 6405 tgatgaagaagaggatgaggaagatgatgatga 6437
>gb|CP000448.1| Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete genome Length = 2936195 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 549 gatcctgaagaacttaccagg 569 ||||||||||||||||||||| Sbjct: 2283109 gatcctgaagaacttaccagg 2283089
>ref|XR_019178.1| PREDICTED: Homo sapiens similar to Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I) (HLA-DR-associated protein II) (PHAPII) (Inhibitor of granzyme A-activated DNase) (IGAAD) (LOC642737), mRNA Length = 864 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 804 gatattgatgaaggagaggatgaggatga 832 ||||||||||||| || |||||||||||| Sbjct: 775 gatattgatgaagaaggggatgaggatga 803
>ref|XR_016283.1| PREDICTED: Homo sapiens similar to Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I) (HLA-DR-associated protein II) (PHAPII) (Inhibitor of granzyme A-activated DNase) (IGAAD) (LOC642737), mRNA Length = 864 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 804 gatattgatgaaggagaggatgaggatga 832 ||||||||||||| || |||||||||||| Sbjct: 775 gatattgatgaagaaggggatgaggatga 803
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 813 gaaggagaggatgaggatgatgaagatga 841 |||| |||||||||||||||||| ||||| Sbjct: 19792964 gaagaagaggatgaggatgatgatgatga 19792936
>gb|BC122332.1| Danio rerio cDNA clone IMAGE:7400007, partial cds Length = 1576 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 |||||||| ||| |||||||||||||| ||||| Sbjct: 259 tgatgaagaagaagatgaggatgatgatgatga 291
>ref|NM_017580.2| Homo sapiens zinc finger, RAN-binding domain containing 1 (ZRANB1), mRNA Length = 4942 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaa 842 ||||||||||||||||||||| Sbjct: 2475 gatgaggatgatgaagatgaa 2495
>ref|NW_001091929.1| Theileria annulata strain Ankara clone C9 Length = 2592520 Score = 42.1 bits (21), Expect = 4.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 812 tgaaggagaggatgaggatgatgaagatgaagttcct 848 |||||| ||||||||||| ||||||||| | |||||| Sbjct: 1217707 tgaaggtgaggatgaggaagatgaagataaggttcct 1217743
>ref|XM_001057198.1| PREDICTED: Rattus norvegicus similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38) (LOC300303), mRNA Length = 1327 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 808 ttgatgaaggagaggatgaggatgatgaagatg 840 ||||||||| || ||||||||||||||||||| Sbjct: 580 ttgatgaagatgatgatgaggatgatgaagatg 612
>ref|XM_001071582.1| PREDICTED: Rattus norvegicus hypothetical protein LOC689665 (LOC689665), mRNA Length = 750 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||||||||||||||| |||| Sbjct: 643 gaggatgaggatgatgaagaggaag 667
>ref|XM_213108.4| PREDICTED: Rattus norvegicus similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38) (LOC300303), mRNA Length = 1327 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 808 ttgatgaaggagaggatgaggatgatgaagatg 840 ||||||||| || ||||||||||||||||||| Sbjct: 580 ttgatgaagatgatgatgaggatgatgaagatg 612
>ref|XM_001065121.1| PREDICTED: Rattus norvegicus similar to keratin complex 2, basic, gene 6a, transcript variant 1 (LOC683313), mRNA Length = 2214 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1020 aatgagcacctcttttttagt 1040 ||||||||||||||||||||| Sbjct: 2019 aatgagcacctcttttttagt 2039
>ref|XM_001065178.1| PREDICTED: Rattus norvegicus similar to keratin complex 2, basic, gene 6a, transcript variant 2 (LOC683313), mRNA Length = 2252 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1020 aatgagcacctcttttttagt 1040 ||||||||||||||||||||| Sbjct: 2057 aatgagcacctcttttttagt 2077
>ref|XM_001078400.1| PREDICTED: Rattus norvegicus CD2 antigen (cytoplasmic tail) binding protein 2 (predicted) (Cd2bp2_predicted), mRNA Length = 3128 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaa 842 ||||||||||||||||||||| Sbjct: 200 gatgaggatgatgaagatgaa 220
>ref|XM_215082.4| PREDICTED: Rattus norvegicus CD2 antigen (cytoplasmic tail) binding protein 2 (predicted) (Cd2bp2_predicted), mRNA Length = 3128 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaa 842 ||||||||||||||||||||| Sbjct: 200 gatgaggatgatgaagatgaa 220
>gb|BT025992.1| Arabidopsis thaliana At4g35050 mRNA, complete cds Length = 1275 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||||||||| ||||||| Sbjct: 1210 gaggatgaggatgatgatgatgaag 1234
>ref|XM_001110078.1| PREDICTED: Macaca mulatta mediator of RNA polymerase II transcription, subunit 13 homolog, transcript variant 1 (THRAP1), mRNA Length = 6520 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 825 gaggatgatgaagatgaagtt 845 ||||||||||||||||||||| Sbjct: 4708 gaggatgatgaagatgaagtt 4688
>ref|XM_001110128.1| PREDICTED: Macaca mulatta mediator of RNA polymerase II transcription, subunit 13 homolog, transcript variant 2 (THRAP1), mRNA Length = 10006 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 825 gaggatgatgaagatgaagtt 845 ||||||||||||||||||||| Sbjct: 4708 gaggatgatgaagatgaagtt 4688
>ref|XM_001110539.1| PREDICTED: Macaca mulatta similar to Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I) (HLA-DR-associated protein II) (PHAPII) (Inhibitor of granzyme A-activated DNase) (IGAAD), transcript variant 1 (LOC717352), mRNA Length = 1369 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 804 gatattgatgaaggagaggatgaggatga 832 ||||||||||||| || |||||||||||| Sbjct: 879 gatattgatgaagaaggggatgaggatga 907
>ref|XM_001110579.1| PREDICTED: Macaca mulatta similar to Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I) (HLA-DR-associated protein II) (PHAPII) (Inhibitor of granzyme A-activated DNase) (IGAAD), transcript variant 2 (LOC717352), mRNA Length = 2038 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 804 gatattgatgaaggagaggatgaggatga 832 ||||||||||||| || |||||||||||| Sbjct: 879 gatattgatgaagaaggggatgaggatga 907
>ref|XM_001089103.1| PREDICTED: Macaca mulatta similar to Calcitonin gene-related peptide 2 precursor (Calcitonin gene-related peptide II) (CGRP-II) (Beta-type CGRP) (LOC700764), mRNA Length = 1212 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 833 tgaagatgaagttccttcagc 853 ||||||||||||||||||||| Sbjct: 1131 tgaagatgaagttccttcagc 1151
>ref|XM_001111455.1| PREDICTED: Macaca mulatta similar to Major centromere autoantigen B (Centromere protein B) (CENP-B) (LOC718571), mRNA Length = 2441 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||| ||||||||||||||||||| Sbjct: 1360 gaggaagaggatgatgaagatgaag 1384
>ref|XM_001086109.1| PREDICTED: Macaca mulatta similar to TRAF-binding protein (LOC697541), mRNA Length = 3056 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaa 842 ||||||||||||||||||||| Sbjct: 1525 gatgaggatgatgaagatgaa 1545
>ref|XM_001095406.1| PREDICTED: Macaca mulatta hypothetical protein LOC706989 (LOC706989), mRNA Length = 3833 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||||||||||||||| |||| Sbjct: 953 gaggatgaggatgatgaagaggaag 929
>ref|XM_001092042.1| PREDICTED: Macaca mulatta similar to nucleophosmin 1 isoform 1 (LOC703729), mRNA Length = 710 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||||||||| ||||||| Sbjct: 600 gaggatgaggatgatgatgatgaag 624
>ref|XM_001098673.1| PREDICTED: Macaca mulatta similar to Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I) (HLA-DR-associated protein II) (PHAPII) (Inhibitor of granzyme A-activated DNase) (IGAAD) (SET), mRNA Length = 1844 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 804 gatattgatgaaggagaggatgaggatga 832 ||||||||||||| || |||||||||||| Sbjct: 844 gatattgatgaagaaggggatgaggatga 872
>ref|NM_005121.2| Homo sapiens thyroid hormone receptor associated protein 1 (THRAP1), mRNA Length = 10474 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 825 gaggatgatgaagatgaagtt 845 ||||||||||||||||||||| Sbjct: 4708 gaggatgatgaagatgaagtt 4688
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 cgcttgggcaggaagagcctg 276 ||||||||||||||||||||| Sbjct: 1037689 cgcttgggcaggaagagcctg 1037709
>ref|XM_367636.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07547.4) partial mRNA Length = 1869 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 tcggcaccgccgccgcggcat 247 ||||||||||||||||||||| Sbjct: 1478 tcggcaccgccgccgcggcat 1458
>ref|XM_360381.1| Magnaporthe grisea 70-15 hypothetical protein (MG05755.4) partial mRNA Length = 1893 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 gccgccaccgccgctggccgg 50 ||||||||||||||||||||| Sbjct: 1495 gccgccaccgccgctggccgg 1515
>ref|NM_119671.2| Arabidopsis thaliana MSI3 (MSI3) mRNA, complete cds Length = 1544 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||||||||| ||||||| Sbjct: 1307 gaggatgaggatgatgatgatgaag 1331
>gb|BT020491.1| Arabidopsis thaliana At4g35050 gene, complete cds Length = 1325 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||||||||| ||||||| Sbjct: 1240 gaggatgaggatgatgatgatgaag 1264
>ref|XM_639858.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0217083) mRNA, complete cds Length = 1974 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 811 atgaaggagaggatgaggatgatgaagatgaag 843 |||||| ||||||||| ||||||||||| |||| Sbjct: 1168 atgaagaagaggatgatgatgatgaagaggaag 1136
>gb|BC048281.1| Homo sapiens zinc finger, RAN-binding domain containing 1, mRNA (cDNA clone IMAGE:5188569), complete cds Length = 2057 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaa 842 ||||||||||||||||||||| Sbjct: 526 gatgaggatgatgaagatgaa 546
>ref|XM_629747.1| Dictyostelium discoideum AX4 putative protein serine/threonine kinase (TAF1) mRNA, complete cds Length = 6933 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||| |||||||||||||||| Sbjct: 5171 gaggatgatgatgatgaagatgaag 5147
>gb|U93872.2| Kaposi's sarcoma-associated herpesvirus glycoprotein M, DNA replication protein, glycoprotein, DNA replication protein, FLICE inhibitory protein and v-cyclin genes, complete cds, and tegument protein gene, partial cds Length = 133661 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||| ||||||||||||| Sbjct: 68593 gaggatgaggaagatgaagatgaag 68569
>gb|AC117807.7| Mus musculus chromosome 8, clone RP24-568P2, complete sequence Length = 175586 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 813 gaaggagaggatgaggatgatgaagatga 841 |||| |||||||||||| ||||||||||| Sbjct: 97581 gaagaagaggatgaggaagatgaagatga 97609
>gb|AC139025.9| Mus musculus chromosome 8, clone RP23-426K13, complete sequence Length = 203230 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 813 gaaggagaggatgaggatgatgaagatga 841 |||| |||||||||||| ||||||||||| Sbjct: 138138 gaagaagaggatgaggaagatgaagatga 138110
>ref|NM_001002042.1| Danio rerio MYB binding protein (P160) 1a (mybbp1a), mRNA gb|AY648744.1| Danio rerio myb binding protein (P160) 1a-like mRNA, complete cds Length = 3881 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||||||||| ||||||| Sbjct: 2219 gaggatgaggatgatgatgatgaag 2243
>gb|BC073408.1| Xenopus laevis MGC80871 protein, mRNA (cDNA clone MGC:80871 IMAGE:5514977), complete cds Length = 1053 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gatgaaggagaggatgaggatgatgaaga 838 ||||||| ||| ||||||||||||||||| Sbjct: 921 gatgaagaagatgatgaggatgatgaaga 949
>ref|NM_131215.2| Danio rerio orthodenticle homolog 1 like (otx1l), mRNA gb|BC076432.1| Danio rerio orthodenticle homolog 1 like, mRNA (cDNA clone MGC:100760 IMAGE:7138889), complete cds Length = 1660 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 810 gatgaaggagaggatgaggatgatgaaga 838 ||||||| |||||||||||||||||||| Sbjct: 698 gatgaagacgaggatgaggatgatgaaga 670
>gb|BC072268.1| Xenopus laevis hypothetical protein MGC82396, mRNA (cDNA clone MGC:82396 IMAGE:4407832), complete cds Length = 3052 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||||||||| |||||||||| Sbjct: 923 gaggatgaggatgaagaagatgaag 947
>ref|XM_711644.1| Candida albicans SC5314 hypothetical protein (CaO19_3430), mRNA Length = 1035 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||||||||||||||| |||| Sbjct: 262 gaggatgaggatgatgaagaggaag 286
>ref|XM_711585.1| Candida albicans SC5314 hypothetical protein (CaO19_10934), mRNA Length = 1035 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||||||||||||||| |||| Sbjct: 262 gaggatgaggatgatgaagaggaag 286
>ref|XM_455189.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F02409g predicted mRNA Length = 3744 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 |||||||| ||||||||| || ||||||||||| Sbjct: 168 tgatgaagaagaggatgaagaagatgaagatga 200
>ref|XM_502846.1| Yarrowia lipolytica CLIB122, YALI0D15114g predicted mRNA Length = 1758 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 815 aggagaggatgaggatgatgaagat 839 ||||||||||||||| ||||||||| Sbjct: 1704 aggagaggatgaggacgatgaagat 1728
>gb|BC033658.1| Homo sapiens cDNA clone IMAGE:4393427, partial cds Length = 1404 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||| ||||||||||||||||||| Sbjct: 299 gaggaagaggatgatgaagatgaag 323
>gb|AY539899.1| Rattus norvegicus LRRGT00148 mRNA, complete cds Length = 162 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 804 gatattgatgaaggagaggatgaggatga 832 ||||||||||||| ||| ||||||||||| Sbjct: 67 gatattgatgaagaagaagatgaggatga 95
>gb|AC007610.10| Homo sapiens chromosome 16 clone RP11-429P3, complete sequence Length = 214786 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 |||||||||||| ||||| |||||||| ||||| Sbjct: 12507 tgatgaaggagatgatgatgatgatgatgatga 12539
>gb|BC040446.2| Homo sapiens centromere protein B, 80kDa, mRNA (cDNA clone IMAGE:4214146), with apparent retained intron Length = 1482 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||| ||||||||||||||||||| Sbjct: 369 gaggaagaggatgatgaagatgaag 393
>ref|XM_537704.2| PREDICTED: Canis familiaris similar to Thyroid hormone receptor-associated protein complex 240 kDa component (Trap240) (Thyroid hormone receptor associated protein 1) (Vitamin D3 receptor-interacting protein complex component DRIP250) (DRIP 250) (Activator-recruited cofactor ... (LOC480582), mRNA Length = 8625 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 825 gaggatgatgaagatgaagtt 845 ||||||||||||||||||||| Sbjct: 4655 gaggatgatgaagatgaagtt 4635
>gb|BC003649.2| Homo sapiens centromere protein B, 80kDa, mRNA (cDNA clone IMAGE:3534658), with apparent retained intron Length = 1285 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||| ||||||||||||||||||| Sbjct: 194 gaggaagaggatgatgaagatgaag 218
>ref|XM_850345.1| PREDICTED: Canis familiaris similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38) (LOC612611), mRNA Length = 618 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 |||||||| ||| ||||| |||||||||||||| Sbjct: 300 tgatgaagaagatgatgatgatgatgaagatga 332
>ref|NM_080201.1| Drosophila melanogaster female sterile (2) ltoPP43 CG10528-RA, transcript variant A (fs(2)ltoPP43), mRNA Length = 1187 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 813 gaaggagaggatgaggatgatgaagatga 841 |||| |||||||||||||||||| ||||| Sbjct: 1125 gaagaagaggatgaggatgatgatgatga 1153
>ref|NM_194353.1| Rattus norvegicus SET translocation (Set), mRNA gb|AY366388.1| Rattus norvegicus liver regeneration related protein LRRGR00002 mRNA, complete cds Length = 858 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 |||||||||||||| ||||||||||| ||||| Sbjct: 717 tgatgaaggagaggcagaggatgatgatgatga 749
>ref|NM_001046516.1| Bos taurus similar to dynein, cytoplasmic, intermediate polypeptide 1 (MGC137597), mRNA gb|BC114074.1| Bos taurus similar to dynein, cytoplasmic, intermediate polypeptide 1, mRNA (cDNA clone MGC:137597 IMAGE:8173317), complete cds Length = 2580 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 818 agaggatgaggatgatgaaga 838 ||||||||||||||||||||| Sbjct: 612 agaggatgaggatgatgaaga 632
>gb|AY131198.1| Human herpesvirus 8 ORF45 mRNA, complete cds Length = 1772 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||| ||||||||||||| Sbjct: 800 gaggatgaggaagatgaagatgaag 824
>gb|BC099121.1| Rattus norvegicus cDNA clone MGC:116262 IMAGE:7462749, complete cds Length = 2261 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1020 aatgagcacctcttttttagt 1040 ||||||||||||||||||||| Sbjct: 2030 aatgagcacctcttttttagt 2050
>ref|XM_462353.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G19877g) partial mRNA Length = 1419 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 813 gaaggagaggatgaggatgatgaagatga 841 |||| ||||||||||||||| |||||||| Sbjct: 917 gaagaagaggatgaggatgaagaagatga 889
>ref|XM_627686.1| Cryptosporidium parvum Iowa II translation initiation factor EIF-2B epsilon subunit (cgd6_3420), partial mRNA Length = 2379 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||||||||||||||| |||| Sbjct: 1747 gaggatgaggatgatgaagaggaag 1771
>ref|XM_660484.1| Cryptosporidium hominis TU502 translation initiation factor eif-2b epsilon subunit (Chro.60395) partial mRNA Length = 2181 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||||||||||||||| |||| Sbjct: 1747 gaggatgaggatgatgaagaggaag 1771
>gb|AF148805.2| Human herpesvirus 8 isolate GK18, complete genome Length = 137969 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||| ||||||||||||| Sbjct: 68393 gaggatgaggaagatgaagatgaag 68369
>ref|NM_001810.5| Homo sapiens centromere protein B, 80kDa (CENPB), mRNA Length = 2856 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||| ||||||||||||||||||| Sbjct: 1765 gaggaagaggatgatgaagatgaag 1789
>ref|NM_145356.3| Mus musculus zinc finger and BTB domain containing 7C (Zbtb7c), mRNA gb|BC070424.1| Mus musculus zinc finger and BTB domain containing 7C, mRNA (cDNA clone MGC:92939 IMAGE:6837447), complete cds Length = 4591 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||| |||||||||||||||| Sbjct: 910 gaggatgacgatgatgaagatgaag 934
>gb|BC018187.1| Mus musculus zinc finger and BTB domain containing 7C, mRNA (cDNA clone MGC:25876 IMAGE:4208891), complete cds Length = 2163 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||| |||||||||||||||| Sbjct: 607 gaggatgacgatgatgaagatgaag 631
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 gagataagccgccaccgccgc 43 ||||||||||||||||||||| Sbjct: 112106 gagataagccgccaccgccgc 112126
>gb|AC018628.13| Homo sapiens chromosome 17, clone RP11-342K2, complete sequence Length = 104030 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 825 gaggatgatgaagatgaagtt 845 ||||||||||||||||||||| Sbjct: 76002 gaggatgatgaagatgaagtt 75982
>dbj|AK156372.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830019A21 product:Hypothetical protein (APM-1 protein homolog), full insert sequence Length = 3821 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||| |||||||||||||||| Sbjct: 578 gaggatgacgatgatgaagatgaag 602
>gb|AC060798.10| Homo sapiens chromosome 17, clone RP11-615P24, complete sequence Length = 171994 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 825 gaggatgatgaagatgaagtt 845 ||||||||||||||||||||| Sbjct: 150829 gaggatgatgaagatgaagtt 150849
>ref|NM_059769.2| Caenorhabditis elegans R11A5.1a (apb-3) mRNA, complete cds Length = 2757 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 803 tgatattgatgaaggagaggatgaggatgatgaagatgaag 843 ||||| ||| |||| ||| ||||| |||||||||||||||| Sbjct: 1776 tgatagtgacgaagaagaagatgatgatgatgaagatgaag 1816
>ref|NM_059770.3| Caenorhabditis elegans R11A5.1b (apb-3) mRNA, complete cds Length = 2815 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 803 tgatattgatgaaggagaggatgaggatgatgaagatgaag 843 ||||| ||| |||| ||| ||||| |||||||||||||||| Sbjct: 1746 tgatagtgacgaagaagaagatgatgatgatgaagatgaag 1786
>dbj|AK045522.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230208J24 product:APM-1 PROTEIN homolog [Homo sapiens], full insert sequence Length = 3572 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||| |||||||||||||||| Sbjct: 874 gaggatgacgatgatgaagatgaag 898
>gb|AC025944.8| Homo sapiens chromosome 10 clone RP11-237L11, complete sequence Length = 173904 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaa 842 ||||||||||||||||||||| Sbjct: 32465 gatgaggatgatgaagatgaa 32485
>ref|XM_812633.1| Trypanosoma cruzi strain CL Brener molybdenum cofactor biosynthesis protein (Tc00.1047053511211.40) partial mRNA Length = 2337 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||||||||| ||||||| Sbjct: 1972 gaggatgaggatgatgatgatgaag 1996
>gb|AC079917.6| Homo sapiens chromosome 11, clone RP11-55I22, complete sequence Length = 140542 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1105 acaaaaaggaaaaggtcttga 1125 ||||||||||||||||||||| Sbjct: 117582 acaaaaaggaaaaggtcttga 117562
>gb|AC104570.3| Homo sapiens chromosome 11, clone RP11-148I19, complete sequence Length = 172683 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1105 acaaaaaggaaaaggtcttga 1125 ||||||||||||||||||||| Sbjct: 1345 acaaaaaggaaaaggtcttga 1325
>gb|AC026886.9| Homo sapiens chromosome 10 clone RP11-371O16, complete sequence Length = 173898 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 822 gatgaggatgatgaagatgaa 842 ||||||||||||||||||||| Sbjct: 141434 gatgaggatgatgaagatgaa 141414
>ref|XM_681619.1| PREDICTED: Danio rerio similar to CG32045-PC, isoform C (LOC558414), mRNA Length = 6114 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||| ||||||||||||| Sbjct: 3467 gaggatgaggaagatgaagatgaag 3443
>emb|CR396587.8| Zebrafish DNA sequence from clone CH211-261P15 in linkage group 16, complete sequence Length = 91165 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1116 aaggtcttgaaatattagctttttc 1140 ||||||||||||||| ||||||||| Sbjct: 21439 aaggtcttgaaatatcagctttttc 21463
>ref|XM_689186.1| PREDICTED: Danio rerio similar to LOC300675_predicted protein (LOC565922), mRNA Length = 962 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 |||||||| ||| |||||||||||||| ||||| Sbjct: 281 tgatgaagaagaagatgaggatgatgatgatga 313
>emb|AL732604.5| Human DNA sequence from clone RP11-27G9 on chromosome X Contains a SET translocation (myeloid leukemia-associated) (SET) pseudogene, complete sequence Length = 166517 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 804 gatattgatgaaggagaggatgaggatga 832 ||||||||||||| || |||||||||||| Sbjct: 43622 gatattgatgaagaaggggatgaggatga 43650
>emb|AL731571.3| Human DNA sequence from clone RP11-59C5 on chromosome 10 Contains the 3' end of the ZRANB1 gene for zinc finger RAN-binding domain containing 1 and the 3' end of the CTBP2 gene for C-terminal binding protein 2, complete sequence Length = 63176 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaa 842 ||||||||||||||||||||| Sbjct: 9548 gatgaggatgatgaagatgaa 9568
>ref|XM_684806.1| PREDICTED: Danio rerio similar to hypothetical protein LOC553241 (LOC561400), mRNA Length = 3997 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 ||||||||| |||||||| | |||||||||||| Sbjct: 1161 tgatgaaggggaggatgatggtgatgaagatga 1193
>ref|XM_704709.1| PREDICTED: Danio rerio hypothetical protein LOC553241, transcript variant 2 (LOC553241), mRNA Length = 4613 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 ||||||||| |||||||| | |||||||||||| Sbjct: 1456 tgatgaaggggaggatgatggtgatgaagatga 1488
>ref|XM_679814.1| PREDICTED: Danio rerio hypothetical protein LOC553241, transcript variant 1 (LOC553241), mRNA Length = 4585 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 ||||||||| |||||||| | |||||||||||| Sbjct: 1434 tgatgaaggggaggatgatggtgatgaagatga 1466
>ref|XM_689128.1| PREDICTED: Danio rerio similar to nuclear receptor interacting protein 2 (LOC565865), mRNA Length = 2164 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||| ||||||||||||||||| Sbjct: 694 gaggatggggatgatgaagatgaag 718
>gb|AF350707.1|AF350707 Capanemia superflua chloroplast tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence Length = 1164 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 818 agaggatgaggatgatgaaga 838 ||||||||||||||||||||| Sbjct: 798 agaggatgaggatgatgaaga 778
>emb|AL121985.13|HSA404F10 Human DNA sequence from clone RP11-404F10 on chromosome 1q23.1-24.1 Contains the 5' end of the SLAMF1 gene for signaling lymphocytic activation molecule family member 1, a SET translocation (myeloid leukemia-associated) (SET) pseudogene, a novel gene, the CD48 gene for CD48 antigen (B-cell membrane protein), the SLAMF7 gene for SLAM family member 7 and the 5' end of the LY9 gene for lymphocyte antigen 9, complete sequence Length = 195976 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 804 gatattgatgaaggagaggatgaggatga 832 ||||||||||||| || |||||||||||| Sbjct: 58163 gatattgatgaagaaggggatgaggatga 58191
>emb|AL109804.41|HS1009E24 Human DNA sequence from clone RP5-1009E24 on chromosome 20 Contains the 5' end of the ADAM33 gene for a disintegrin and metalloproteinase domain 33 protein, the SN gene encoding sialoadhesin, the C20orf60 gene, the C20orf27 gene, the C20orf28 gene, the CENPB gene for centromere protein B, the CDC25B gene for cell division cycle protein 25B, the C20orf29 gene, the 5' end of the gene for a novel protein (KIAA1271) and nine CpG islands, complete sequence Length = 185820 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||| ||||||||||||||||||| Sbjct: 109512 gaggaagaggatgatgaagatgaag 109488
>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome Length = 1144377 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 804 gatattgatgaaggagaggat 824 ||||||||||||||||||||| Sbjct: 1129003 gatattgatgaaggagaggat 1128983
>emb|AL954687.17| Zebrafish DNA sequence from clone CH211-202B2 in linkage group 19, complete sequence Length = 191582 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 818 agaggatgaggatgatgaaga 838 ||||||||||||||||||||| Sbjct: 74740 agaggatgaggatgatgaaga 74760
>gb|BC012297.1|BC012297 Homo sapiens, clone IMAGE:3447254, mRNA, partial cds Length = 1266 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||| ||||||||||||||||||| Sbjct: 176 gaggaagaggatgatgaagatgaag 200
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 813 gaaggagaggatgaggatgatgaagatga 841 |||| ||||||||||||||| |||||||| Sbjct: 1515305 gaagaagaggatgaggatgaagaagatga 1515277
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||||||||| ||||||| Sbjct: 451921 gaggatgaggatgatgaggatgaag 451897
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 |||||||| ||||||||||||||||| ||||| Sbjct: 248779 tgatgaagatgaggatgaggatgatgaggatga 248811
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4 Length = 293050 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 |||||||||||||||||||| |||| Sbjct: 64647 gaggatgaggatgatgaagaggaag 64671
>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82 Length = 195165 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||||||||| ||||||| Sbjct: 137597 gaggatgaggatgatgatgatgaag 137573
>emb|AL022023.1|ATM4E13 Arabidopsis thaliana DNA chromosome 4, BAC clone M4E13 (ESSAII project) Length = 80346 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||||||||| ||||||| Sbjct: 38630 gaggatgaggatgatgatgatgaag 38606
>emb|AL035522.1|ATT12J5 Arabidopsis thaliana DNA chromosome 4, BAC clone T12J5 (ESSAII project) Length = 84499 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||||||||| ||||||| Sbjct: 7676 gaggatgaggatgatgatgatgaag 7652
>gb|AC005719.2|AC005719 Drosophila melanogaster, chromosome 2L, region 38A5-38B4, BAC clone BACR48M05, complete sequence Length = 188341 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 813 gaaggagaggatgaggatgatgaagatga 841 |||| |||||||||||||||||| ||||| Sbjct: 149572 gaagaagaggatgaggatgatgatgatga 149600
>gb|BC078263.1| Danio rerio hypothetical protein LOC553241, mRNA (cDNA clone IMAGE:7148907), partial cds Length = 1705 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 ||||||||| |||||||| | |||||||||||| Sbjct: 1455 tgatgaaggggaggatgatggtgatgaagatga 1487
>emb|BX323889.13| Zebrafish DNA sequence from clone CH211-14G4 in linkage group 20, complete sequence Length = 177017 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||| ||||||||||||| Sbjct: 12723 gaggatgaggaagatgaagatgaag 12747
>gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence Length = 254733 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 811 atgaaggagaggatgaggatgatgaagatgaag 843 |||||| ||||||||| ||||||||||| |||| Sbjct: 38898 atgaagaagaggatgatgatgatgaagaggaag 38866
>emb|AL832925.1|HSM804236 Homo sapiens mRNA; cDNA DKFZp762P2216 (from clone DKFZp762P2216) Length = 3140 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 822 gatgaggatgatgaagatgaa 842 ||||||||||||||||||||| Sbjct: 1655 gatgaggatgatgaagatgaa 1675
>gb|AC007597.3|AC007597 Homo sapiens chromosome 16 clone RP11-137H10, complete sequence Length = 192814 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 809 tgatgaaggagaggatgaggatgatgaagatga 841 |||||||||||| ||||| |||||||| ||||| Sbjct: 129521 tgatgaaggagatgatgatgatgatgatgatga 129553
>emb|CR591718.1| full-length cDNA clone CS0DL010YL05 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 714 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||| ||||||||||||||||||| Sbjct: 102 gaggaagaggatgatgaagatgaag 126
>gb|BT002870.1| Arabidopsis thaliana clone RAFL14-87-D13 (R20340) putative WD-40 repeat protein (MSI3) (At4g35050) mRNA, complete cds Length = 1560 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 gaggatgaggatgatgaagatgaag 843 ||||||||||||||||| ||||||| Sbjct: 1307 gaggatgaggatgatgatgatgaag 1331
>ref|XM_957274.1| Neurospora crassa OR74A hypothetical protein (NCU06625.1) partial mRNA Length = 708 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 816 ggagaggatgaggatgatgaagatgaagt 844 |||||||| ||||||||||| |||||||| Sbjct: 449 ggagaggaggaggatgatgatgatgaagt 421
>dbj|AB011165.2| Homo sapiens mRNA for KIAA0593 protein, partial cds Length = 8099 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 825 gaggatgatgaagatgaagtt 845 ||||||||||||||||||||| Sbjct: 4126 gaggatgatgaagatgaagtt 4106
>emb|BX855617.8| Zebrafish DNA sequence from clone DKEYP-123H10 in linkage group 1, complete sequence Length = 160094 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gatgaaggagaggatgaggatgatgaaga 838 ||||||| |||||||||||||||||||| Sbjct: 31134 gatgaagacgaggatgaggatgatgaaga 31162
>gb|AC008905.6|AC008905 Homo sapiens chromosome 5 clone CTD-2259I14, complete sequence Length = 129430 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 804 gatattgatgaaggagaggatgaggatga 832 ||||||||||||| || |||||||||||| Sbjct: 15716 gatattgatgaagaaggggatgaggatga 15688 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 193,039,780 Number of extensions: 10654759 Number of successful extensions: 259107 Number of sequences better than 10.0: 274 Number of HSP's gapped: 259102 Number of HSP's successfully gapped: 292 Length of query: 1158 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1135 Effective length of database: 18,503,978,556 Effective search space: 21002015661060 Effective search space used: 21002015661060 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)