ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf166g12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK065477:Os03g0118600 | 385 | e-107 | 2 | AK062159:Os03g0118600 | 367 | e-102 | 3 | AK121466:Os08g0542800 | 31 | 1.6 | 4 | AK065673:Os02g0436400 | 31 | 1.6 | 5 | AK109644:Os06g0638400 | 30 | 2.7 | 6 | AK073681:Os08g0144000 | 30 | 3.5 | 7 | AK066544:Os07g0102100 | 30 | 3.5 | 8 | Os02g0644400:Os02g0644400 | 30 | 4.6 | 9 | AK120722:Os06g0664200 | 29 | 6.0 | 10 | AK101477:Os04g0533000 | 29 | 6.0 | 11 | AK071636:Os04g0533000 | 29 | 6.0 | 12 | Os06g0544100:Os06g0544100 | 29 | 7.8 |
|---|
>AK065477:Os03g0118600 | Length = 301 Score = 385 bits (988), Expect = e-107 Identities = 203/266 (76%), Positives = 222/266 (83%), Gaps = 39/266 (14%) Frame = +1 Query: 217 TIKVVIVGATKEMGRAAIAAVNRARGMELAGAIDTQCIGMDAGELSGMDEALEIPVLNDL 396 TIKVVI+GATKE+GR AIAAV++ARGMELAGAID+QCIG+DAGE+SGM+EALEIPVLNDL Sbjct: 36 TIKVVIIGATKEIGRTAIAAVSKARGMELAGAIDSQCIGLDAGEISGMEEALEIPVLNDL 95 Query: 397 TMVLGSIAQTRATGVVVDFSEPSSVYDNVKQAAAFGLSSVVYVPKIEMDTVTELSAFCDK 576 TMVLGSIAQTRATGVVVDFSEPS+VYDNVKQAAAFGL+SVVYVPKIE+DTVTELSAFC+K Sbjct: 96 TMVLGSIAQTRATGVVVDFSEPSTVYDNVKQAAAFGLNSVVYVPKIELDTVTELSAFCEK 155 Query: 577 ASM---------------------------------------DLPSPDAIQIANNISDLG 639 ASM DLPS DAIQIANNI+DLG Sbjct: 156 ASMGCLVTPTLSIGSVLLQQAAIQASFHYNNVEIVESRPNPSDLPSQDAIQIANNITDLG 215 Query: 640 QIYNRQDMDSDNPARGQVLGEDGVRVHSMVLPGLASSTSVVLSGPGEVYTLKHDVTDVQS 819 QIYNR+DMDSDNPARGQ+LGEDGVRVHSMVLPGLASSTS+ SGPGE+YTL+HDVT+VQ Sbjct: 216 QIYNREDMDSDNPARGQILGEDGVRVHSMVLPGLASSTSIHFSGPGEIYTLRHDVTNVQC 275 Query: 820 LMPGLILAIRKVIRLKNLIYGLEKFL 897 LMPGLILAIRKVIRLKNLIYGLEKFL Sbjct: 276 LMPGLILAIRKVIRLKNLIYGLEKFL 301
>AK062159:Os03g0118600 | Length = 335 Score = 367 bits (943), Expect = e-102 Identities = 203/300 (67%), Positives = 222/300 (74%), Gaps = 73/300 (24%) Frame = +1 Query: 217 TIKVVIVGATKEMGRAAIAAVNRARGMELAGAIDTQCIGMDAGELSGMDEALEIPVLNDL 396 TIKVVI+GATKE+GR AIAAV++ARGMELAGAID+QCIG+DAGE+SGM+EALEIPVLNDL Sbjct: 36 TIKVVIIGATKEIGRTAIAAVSKARGMELAGAIDSQCIGLDAGEISGMEEALEIPVLNDL 95 Query: 397 TMVLGSIAQ----------------------------------TRATGVVVDFSEPSSVY 474 TMVLGSIAQ TRATGVVVDFSEPS+VY Sbjct: 96 TMVLGSIAQVLASSLYYKMLISTCTVVLLYTSRVCYLKLMFFQTRATGVVVDFSEPSTVY 155 Query: 475 DNVKQAAAFGLSSVVYVPKIEMDTVTELSAFCDKASM----------------------- 585 DNVKQAAAFGL+SVVYVPKIE+DTVTELSAFC+KASM Sbjct: 156 DNVKQAAAFGLNSVVYVPKIELDTVTELSAFCEKASMGCLVTPTLSIGSVLLQQAAIQAS 215 Query: 586 ----------------DLPSPDAIQIANNISDLGQIYNRQDMDSDNPARGQVLGEDGVRV 717 DLPS DAIQIANNI+DLGQIYNR+DMDSDNPARGQ+LGEDGVRV Sbjct: 216 FHYNNVEIVESRPNPSDLPSQDAIQIANNITDLGQIYNREDMDSDNPARGQILGEDGVRV 275 Query: 718 HSMVLPGLASSTSVVLSGPGEVYTLKHDVTDVQSLMPGLILAIRKVIRLKNLIYGLEKFL 897 HSMVLPGLASSTS+ SGPGE+YTL+HDVT+VQ LMPGLILAIRKVIRLKNLIYGLEKFL Sbjct: 276 HSMVLPGLASSTSIHFSGPGEIYTLRHDVTNVQCLMPGLILAIRKVIRLKNLIYGLEKFL 335
>AK121466:Os08g0542800 | Length = 92 Score = 31.2 bits (69), Expect = 1.6 Identities = 13/18 (72%), Positives = 17/18 (94%) Frame = +1 Query: 433 TGVVVDFSEPSSVYDNVK 486 +G+VVD SEPS+VYDNV+ Sbjct: 30 SGMVVDSSEPSTVYDNVE 47
>AK065673:Os02g0436400 | Length = 343 Score = 31.2 bits (69), Expect = 1.6 Identities = 25/98 (25%), Positives = 47/98 (47%) Frame = +1 Query: 226 VVIVGATKEMGRAAIAAVNRARGMELAGAIDTQCIGMDAGELSGMDEALEIPVLNDLTMV 405 +++ T +MG+A A A G++L + I + G++ D + I ++ + Sbjct: 71 ILVNSCTGKMGKAVAEAAVSA-GLQLV-PVSFSAIEVPDGKVEICDREIYIRDPSEGESI 128 Query: 406 LGSIAQTRATGVVVDFSEPSSVYDNVKQAAAFGLSSVV 519 L SIA+ +VVD++ P +V N + GL V+ Sbjct: 129 LPSIAKDYPDMIVVDYTVPDAVNANAELYCKLGLPFVM 166
>AK109644:Os06g0638400 | Length = 89 Score = 30.4 bits (67), Expect = 2.7 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Frame = -3 Query: 467 DEGSLKSTTTPVALVCAMEPRTMVRSLSTGI---SRASSMPLNSPASI 333 DE ++S T+ +L+ + P M + + SRASS+P SP S+ Sbjct: 16 DEQGIRSRTSTASLMAGLLPGAMAQQAKASLKQASRASSLPSASPRSV 63
>AK073681:Os08g0144000 | Length = 383 Score = 30.0 bits (66), Expect = 3.5 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Frame = -3 Query: 356 PLNSPASIPMHWVSMAP------ASSIPRALFTAAIAALPISLVAP 237 P+ PA +PM S+ P A P + T+A A LP+S VAP Sbjct: 200 PVIPPAPVPMLSSSLVPPPVPAMAPVAPGPVLTSASATLPVSAVAP 245
>AK066544:Os07g0102100 | Length = 808 Score = 30.0 bits (66), Expect = 3.5 Identities = 49/196 (25%), Positives = 69/196 (35%) Frame = -3 Query: 848 RIARISPGIRLWTSVTSCFKV*TSPGPDKTTDVLEASPGRTMLCTRTPSSPSTWPLAGLS 669 R+AR +W S S TS P T+ ++ T + SSPS+ + S Sbjct: 4 RMARGGRARCVWPSSASASSTATSAPPHSTSTPPPSTAASATPTTSSASSPSSSTASSSS 63 Query: 668 ESISCRLYI*PRSDMLFAICIASGDGKSMLALSQNADSSVTVSISIFGTYTTLLKPNAAA 489 S S P + S S A ++A SS T T T+ P +AA Sbjct: 64 PSSSTSTS--PSAPTTTETAALSPSTPSSPATPRSA-SSPTSRPRTSSTSTSASPPRSAA 120 Query: 488 CLTLS*TDEGSLKSTTTPVALVCAMEPRTMVRSLSTGISRASSMPLNSPASIPMHWVSMA 309 S + P RT R+ + S +SS P S P W S Sbjct: 121 ----------PPSSASPPPPRSAPSGSRTSSRTAAPSASPSSSSP-----SSPPPWSSAT 165 Query: 308 PASSIPRALFTAAIAA 261 PAS P ++A+ Sbjct: 166 PASRPPSPSSPPSVAS 181
>Os02g0644400:Os02g0644400 | Length = 708 Score = 29.6 bits (65), Expect = 4.6 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +2 Query: 971 SKAHNQKHSHWQGGSKNPKKTTHSFGKEFGSTYKMTLLIA 1090 S H+Q W G N KT S +EF K T L+A Sbjct: 39 SPLHHQTKQEWSGRLVNSAKTVESSAREFLGKDKSTTLVA 78
>AK120722:Os06g0664200 | Length = 401 Score = 29.3 bits (64), Expect = 6.0 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 6/58 (10%) Frame = -3 Query: 359 MPLNSPASIPMHWVSMAPASSIP------RALFTAAIAALPISLVAPTMTTLIVLCDG 204 MPL+S + +P+H + P S+ P RAL + P++ +P V DG Sbjct: 1 MPLSSLSLLPLHRAPLPPTSNYPPPPPPSRALLLPLLRHSPLARRSPVSRARAVAADG 58
>AK101477:Os04g0533000 | Length = 498 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 5/28 (17%) Frame = +3 Query: 18 LGNGRARQPE-----PPPSLHDQTPHRH 86 +GNGR P PPPS H Q H+H Sbjct: 11 IGNGRGGNPNYYGRGPPPSQHQQHQHQH 38
>AK071636:Os04g0533000 | Length = 498 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 5/28 (17%) Frame = +3 Query: 18 LGNGRARQPE-----PPPSLHDQTPHRH 86 +GNGR P PPPS H Q H+H Sbjct: 11 IGNGRGGNPNYYGRGPPPSQHQQHQHQH 38
>Os06g0544100:Os06g0544100 | Length = 663 Score = 28.9 bits (63), Expect = 7.8 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 24 NGRARQPEPPPSLHDQTPHRHG 89 N AR+P PPPS PHR G Sbjct: 242 NSTARRPPPPPSPPPSHPHRSG 263 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 34,744,743 Number of extensions: 803832 Number of successful extensions: 2681 Number of sequences better than 10.0: 12 Number of HSP's gapped: 2675 Number of HSP's successfully gapped: 13 Length of query: 411 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 308 Effective length of database: 11,275,632 Effective search space: 3472894656 Effective search space used: 3472894656 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
