| Clone Name | FLbaf166g12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001055308.1| Oryza sativa (japonica cultivar-group) Os03g0118600 (Os03g0118600) mRNA, complete cds Length = 1415 Score = 289 bits (146), Expect = 1e-74 Identities = 272/314 (86%) Strand = Plus / Plus Query: 589 ttgccatcgccagatgcaatacagattgcgaataacatatctgatcttggtcagatatac 648 |||||||||| |||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 693 ttgccatcgcaagatgcaatacagattgcaaataatataacagatcttggtcagatatac 752 Query: 649 aaccgacaagatatggattccgataatccagcaagaggccaggtactcggagaagatgga 708 ||| | |||||||||| ||||||||||||||||| || ||| |||| ||||||||||| Sbjct: 753 aacagggaagatatggactccgataatccagcaaggggtcagatacttggagaagatggg 812 Query: 709 gtgcgtgtgcacagcatggttcttccagggcttgcctcaagcacatcagtcgttttgtca 768 |||||||| ||||| |||||||| ||||| ||||| || || ||||| || ||| || Sbjct: 813 gtgcgtgtccacagtatggttctaccaggccttgcttccagtacatcgatccatttctcg 872 Query: 769 ggccccggagaggtttacaccttgaagcatgatgttacagacgtccagagcctaatgcca 828 ||||| |||||| |||||||||| | |||||||| ||| | || || ||||||||||| Sbjct: 873 ggccctggagagatttacaccttaagacatgatgtgacaaatgttcaatgcctaatgcca 932 Query: 829 gggctaattctggcaatacggaaggtgatacggttgaagaacttgatttatggcctggag 888 || |||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 933 ggattaattctggcaatacggaaggtgatacgcttgaagaacttgatttatggtctggag 992 Query: 889 aagttcttgtagga 902 |||||||||||||| Sbjct: 993 aagttcttgtagga 1006 Score = 234 bits (118), Expect = 6e-58 Identities = 217/250 (86%) Strand = Plus / Plus Query: 337 gatgctggagagttaagcggcatggatgaagccctggagatcccggtgctcaatgacctc 396 ||||| |||||| |||| |||||||| ||||||||||| || |||||||||||||| ||| Sbjct: 324 gatgcaggagagataagtggcatggaagaagccctggaaattccggtgctcaatgatctc 383 Query: 397 accatggttctcggctccatagcgcagacaagagcaactggcgtggttgttgatttcagt 456 || |||||||| ||||| || || || || ||||||||||| ||||| |||||||| ||| Sbjct: 384 acaatggttctgggctcaattgcacaaaccagagcaactggagtggtggttgattttagt 443 Query: 457 gaaccttcatctgtctatgacaatgtcaagcaggcagcagcatttggcttaagcagtgtt 516 ||||||||| |||| ||||| |||||||| |||||||| |||||||| |||| |||||| Sbjct: 444 gaaccttcaactgtttatgataatgtcaaacaggcagcggcatttggtttaaacagtgtg 503 Query: 517 gtatacgttccgaaaatcgagatggatacggtaactgaactgtcagcattctgcgacaag 576 || |||||||| ||||| ||| | ||||| |||||||| ||||||||||||||||| ||| Sbjct: 504 gtgtacgttccaaaaattgagttagatacagtaactgagctgtcagcattctgcgagaag 563 Query: 577 gcaagcatgg 586 |||||||||| Sbjct: 564 gcaagcatgg 573
>dbj|AK065477.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023L22, full insert sequence Length = 1416 Score = 289 bits (146), Expect = 1e-74 Identities = 272/314 (86%) Strand = Plus / Plus Query: 589 ttgccatcgccagatgcaatacagattgcgaataacatatctgatcttggtcagatatac 648 |||||||||| |||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 694 ttgccatcgcaagatgcaatacagattgcaaataatataacagatcttggtcagatatac 753 Query: 649 aaccgacaagatatggattccgataatccagcaagaggccaggtactcggagaagatgga 708 ||| | |||||||||| ||||||||||||||||| || ||| |||| ||||||||||| Sbjct: 754 aacagggaagatatggactccgataatccagcaaggggtcagatacttggagaagatggg 813 Query: 709 gtgcgtgtgcacagcatggttcttccagggcttgcctcaagcacatcagtcgttttgtca 768 |||||||| ||||| |||||||| ||||| ||||| || || ||||| || ||| || Sbjct: 814 gtgcgtgtccacagtatggttctaccaggccttgcttccagtacatcgatccatttctcg 873 Query: 769 ggccccggagaggtttacaccttgaagcatgatgttacagacgtccagagcctaatgcca 828 ||||| |||||| |||||||||| | |||||||| ||| | || || ||||||||||| Sbjct: 874 ggccctggagagatttacaccttaagacatgatgtgacaaatgttcaatgcctaatgcca 933 Query: 829 gggctaattctggcaatacggaaggtgatacggttgaagaacttgatttatggcctggag 888 || |||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 934 ggattaattctggcaatacggaaggtgatacgcttgaagaacttgatttatggtctggag 993 Query: 889 aagttcttgtagga 902 |||||||||||||| Sbjct: 994 aagttcttgtagga 1007 Score = 234 bits (118), Expect = 6e-58 Identities = 217/250 (86%) Strand = Plus / Plus Query: 337 gatgctggagagttaagcggcatggatgaagccctggagatcccggtgctcaatgacctc 396 ||||| |||||| |||| |||||||| ||||||||||| || |||||||||||||| ||| Sbjct: 325 gatgcaggagagataagtggcatggaagaagccctggaaattccggtgctcaatgatctc 384 Query: 397 accatggttctcggctccatagcgcagacaagagcaactggcgtggttgttgatttcagt 456 || |||||||| ||||| || || || || ||||||||||| ||||| |||||||| ||| Sbjct: 385 acaatggttctgggctcaattgcacaaaccagagcaactggagtggtggttgattttagt 444 Query: 457 gaaccttcatctgtctatgacaatgtcaagcaggcagcagcatttggcttaagcagtgtt 516 ||||||||| |||| ||||| |||||||| |||||||| |||||||| |||| |||||| Sbjct: 445 gaaccttcaactgtttatgataatgtcaaacaggcagcggcatttggtttaaacagtgtg 504 Query: 517 gtatacgttccgaaaatcgagatggatacggtaactgaactgtcagcattctgcgacaag 576 || |||||||| ||||| ||| | ||||| |||||||| ||||||||||||||||| ||| Sbjct: 505 gtgtacgttccaaaaattgagttagatacagtaactgagctgtcagcattctgcgagaag 564 Query: 577 gcaagcatgg 586 |||||||||| Sbjct: 565 gcaagcatgg 574
>dbj|AK062159.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-A07, full insert sequence Length = 1474 Score = 289 bits (146), Expect = 1e-74 Identities = 272/314 (86%) Strand = Plus / Plus Query: 589 ttgccatcgccagatgcaatacagattgcgaataacatatctgatcttggtcagatatac 648 |||||||||| |||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 733 ttgccatcgcaagatgcaatacagattgcaaataatataacagatcttggtcagatatac 792 Query: 649 aaccgacaagatatggattccgataatccagcaagaggccaggtactcggagaagatgga 708 ||| | |||||||||| ||||||||||||||||| || ||| |||| ||||||||||| Sbjct: 793 aacagggaagatatggactccgataatccagcaaggggtcagatacttggagaagatggg 852 Query: 709 gtgcgtgtgcacagcatggttcttccagggcttgcctcaagcacatcagtcgttttgtca 768 |||||||| ||||| |||||||| ||||| ||||| || || ||||| || ||| || Sbjct: 853 gtgcgtgtccacagtatggttctaccaggccttgcttccagtacatcgatccatttctcg 912 Query: 769 ggccccggagaggtttacaccttgaagcatgatgttacagacgtccagagcctaatgcca 828 ||||| |||||| |||||||||| | |||||||| ||| | || || ||||||||||| Sbjct: 913 ggccctggagagatttacaccttaagacatgatgtgacaaatgttcaatgcctaatgcca 972 Query: 829 gggctaattctggcaatacggaaggtgatacggttgaagaacttgatttatggcctggag 888 || |||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 973 ggattaattctggcaatacggaaggtgatacgcttgaagaacttgatttatggtctggag 1032 Query: 889 aagttcttgtagga 902 |||||||||||||| Sbjct: 1033 aagttcttgtagga 1046 Score = 170 bits (86), Expect = 8e-39 Identities = 146/166 (87%) Strand = Plus / Plus Query: 421 cagacaagagcaactggcgtggttgttgatttcagtgaaccttcatctgtctatgacaat 480 ||||| ||||||||||| ||||| |||||||| |||||||||||| |||| ||||| ||| Sbjct: 448 cagaccagagcaactggagtggtggttgattttagtgaaccttcaactgtttatgataat 507 Query: 481 gtcaagcaggcagcagcatttggcttaagcagtgttgtatacgttccgaaaatcgagatg 540 ||||| |||||||| |||||||| |||| |||||| || |||||||| ||||| ||| | Sbjct: 508 gtcaaacaggcagcggcatttggtttaaacagtgtggtgtacgttccaaaaattgagtta 567 Query: 541 gatacggtaactgaactgtcagcattctgcgacaaggcaagcatgg 586 ||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 568 gatacagtaactgagctgtcagcattctgcgagaaggcaagcatgg 613 Score = 81.8 bits (41), Expect = 5e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 337 gatgctggagagttaagcggcatggatgaagccctggagatcccggtgctcaatgacctc 396 ||||| |||||| |||| |||||||| ||||||||||| || |||||||||||||| ||| Sbjct: 262 gatgcaggagagataagtggcatggaagaagccctggaaattccggtgctcaatgatctc 321 Query: 397 accatggttctcggctc 413 || |||||||| ||||| Sbjct: 322 acaatggttctgggctc 338
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 109 bits (55), Expect = 2e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 589 ttgccatcgccagatgcaatacagattgcgaataacatatctgatcttggtcagatatac 648 |||||||||| |||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 140979 ttgccatcgcaagatgcaatacagattgcaaataatataacagatcttggtcagatatac 141038 Query: 649 aaccgacaagatatggattccgataatccag 679 ||| | |||||||||| ||||||||||||| Sbjct: 141039 aacagggaagatatggactccgataatccag 141069 Score = 103 bits (52), Expect = 1e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 487 caggcagcagcatttggcttaagcagtgttgtatacgttccgaaaatcgagatggatacg 546 |||||||| |||||||| |||| |||||| || |||||||| ||||| ||| | ||||| Sbjct: 140416 caggcagcggcatttggtttaaacagtgtggtgtacgttccaaaaattgagttagataca 140475 Query: 547 gtaactgaactgtcagcattctgcgacaaggcaagcatgg 586 |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 140476 gtaactgagctgtcagcattctgcgagaaggcaagcatgg 140515 Score = 95.6 bits (48), Expect = 4e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 487 caggcagcagcatttggcttaagcagtgttgtatacgttccgaaaatcgagatggatacg 546 |||||||| |||||||| |||| |||||| || |||||||| || || ||| | ||||| Sbjct: 86350 caggcagcggcatttggtttaaacagtgtggtgtacgttccaaacattgagttagataca 86291 Query: 547 gtaactgaactgtcagcattctgcgacaaggcaagcatgg 586 |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 86290 gtaactgagctgtcagcattctgcgagaaggcaagcatgg 86251 Score = 87.7 bits (44), Expect = 9e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 427 agagcaactggcgtggttgttgatttcagtgaaccttcatctgtctatgacaatgtcaag 486 ||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||||| Sbjct: 86826 agagcaactggagtggtggttgatttcagtgaaccttcaactgtttatgacaatgtcaaa 86767 Query: 487 cagg 490 |||| Sbjct: 86766 cagg 86763 Score = 85.7 bits (43), Expect = 3e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 589 ttgccatcgccagatgcaatacagattgcgaataacatatctgatcttggtcagatatac 648 |||||||| | |||||||||||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 85798 ttgccatcacaagatgcaatacagattgcaaataatatatcagatcttggtcagatatac 85739 Query: 649 aac 651 ||| Sbjct: 85738 aac 85736 Score = 75.8 bits (38), Expect = 3e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 421 cagacaagagcaactggcgtggttgttgatttcagtgaaccttcatctgtctatgacaat 480 ||||| ||||||||||| ||||| |||||||| |||||||||||| |||| ||||| ||| Sbjct: 139921 cagaccagagcaactggagtggtggttgattttagtgaaccttcaactgtttatgataat 139980 Query: 481 gtcaagcagg 490 ||||| |||| Sbjct: 139981 gtcaaacagg 139990 Score = 75.8 bits (38), Expect = 3e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 818 gcctaatgccagggctaattctggcaatacggaaggtgatacggttgaag 867 ||||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 141475 gcctaatgccaggattaattctggcaatacggaaggtgatacgcttgaag 141524 Score = 71.9 bits (36), Expect = 5e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 679 gcaagaggccaggtactcggagaagatggagtgcgtgtgcacagcatggttcttccaggg 738 ||||| || ||| |||| ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 85530 gcaaggggtcagatacttggagaagatggggtgcgtgtccacagtatggttctaccaggc 85471 Query: 739 cttgcctcaagcacatcagtcgttttgtcaggccccggagaggt 782 ||||| || ||||||||| || || |||||||| |||||||| Sbjct: 85470 cttgcttccagcacatcaatcaacttctcaggccctggagaggt 85427 Score = 71.9 bits (36), Expect = 5e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 350 taagcggcatggatgaagccctggagatcccggtgctcaatgacctcaccatggttctcg 409 |||| |||||||| ||||||||||| || |||||||||||||| ||||| |||||||| | Sbjct: 139748 taagtggcatggaagaagccctggaaattccggtgctcaatgatctcacaatggttctgg 139807 Query: 410 gctc 413 |||| Sbjct: 139808 gctc 139811 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 355 ggcatggatgaagccctggagatcccggtgctcaatgacctcaccatggttctcggctc 413 |||||||| |||||| |||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 86983 ggcatggaagaagccttggaaattccggtgctcaatgatctcacaatggttctcggctc 86925 Score = 67.9 bits (34), Expect = 8e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 818 gcctaatgccagggctaattctggcaatacggaaggtgatacggttgaag 867 |||| |||||||| |||||||||||||||||||||||| |||| |||||| Sbjct: 85307 gcctgatgccaggactaattctggcaatacggaaggtggtacgcttgaag 85258 Score = 65.9 bits (33), Expect = 3e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 866 agaacttgatttatggcctggagaagttcttgtagga 902 |||||||||||||||| |||||||||||||||||||| Sbjct: 141598 agaacttgatttatggtctggagaagttcttgtagga 141634 Score = 58.0 bits (29), Expect = 8e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 679 gcaagaggccaggtactcggagaagatggagtgcgtgtgcacagcatggttcttccaggg 738 ||||| || ||| |||| ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 141251 gcaaggggtcagatacttggagaagatggggtgcgtgtccacagtatggttctaccaggc 141310 Query: 739 cttgc 743 ||||| Sbjct: 141311 cttgc 141315 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 866 agaacttgatttatggcctggagaagttcttgtag 900 |||||||||||||||| || ||||||||||||||| Sbjct: 85189 agaacttgatttatggtctcgagaagttcttgtag 85155
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 109 bits (55), Expect = 2e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 589 ttgccatcgccagatgcaatacagattgcgaataacatatctgatcttggtcagatatac 648 |||||||||| |||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 985780 ttgccatcgcaagatgcaatacagattgcaaataatataacagatcttggtcagatatac 985839 Query: 649 aaccgacaagatatggattccgataatccag 679 ||| | |||||||||| ||||||||||||| Sbjct: 985840 aacagggaagatatggactccgataatccag 985870 Score = 103 bits (52), Expect = 1e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 487 caggcagcagcatttggcttaagcagtgttgtatacgttccgaaaatcgagatggatacg 546 |||||||| |||||||| |||| |||||| || |||||||| ||||| ||| | ||||| Sbjct: 985217 caggcagcggcatttggtttaaacagtgtggtgtacgttccaaaaattgagttagataca 985276 Query: 547 gtaactgaactgtcagcattctgcgacaaggcaagcatgg 586 |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 985277 gtaactgagctgtcagcattctgcgagaaggcaagcatgg 985316 Score = 95.6 bits (48), Expect = 4e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 487 caggcagcagcatttggcttaagcagtgttgtatacgttccgaaaatcgagatggatacg 546 |||||||| |||||||| |||| |||||| || |||||||| || || ||| | ||||| Sbjct: 931151 caggcagcggcatttggtttaaacagtgtggtgtacgttccaaacattgagttagataca 931092 Query: 547 gtaactgaactgtcagcattctgcgacaaggcaagcatgg 586 |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 931091 gtaactgagctgtcagcattctgcgagaaggcaagcatgg 931052 Score = 87.7 bits (44), Expect = 9e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 427 agagcaactggcgtggttgttgatttcagtgaaccttcatctgtctatgacaatgtcaag 486 ||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||||| Sbjct: 931627 agagcaactggagtggtggttgatttcagtgaaccttcaactgtttatgacaatgtcaaa 931568 Query: 487 cagg 490 |||| Sbjct: 931567 cagg 931564 Score = 85.7 bits (43), Expect = 3e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 589 ttgccatcgccagatgcaatacagattgcgaataacatatctgatcttggtcagatatac 648 |||||||| | |||||||||||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 930599 ttgccatcacaagatgcaatacagattgcaaataatatatcagatcttggtcagatatac 930540 Query: 649 aac 651 ||| Sbjct: 930539 aac 930537 Score = 75.8 bits (38), Expect = 3e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 421 cagacaagagcaactggcgtggttgttgatttcagtgaaccttcatctgtctatgacaat 480 ||||| ||||||||||| ||||| |||||||| |||||||||||| |||| ||||| ||| Sbjct: 984722 cagaccagagcaactggagtggtggttgattttagtgaaccttcaactgtttatgataat 984781 Query: 481 gtcaagcagg 490 ||||| |||| Sbjct: 984782 gtcaaacagg 984791 Score = 75.8 bits (38), Expect = 3e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 818 gcctaatgccagggctaattctggcaatacggaaggtgatacggttgaag 867 ||||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 986276 gcctaatgccaggattaattctggcaatacggaaggtgatacgcttgaag 986325 Score = 71.9 bits (36), Expect = 5e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 679 gcaagaggccaggtactcggagaagatggagtgcgtgtgcacagcatggttcttccaggg 738 ||||| || ||| |||| ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 930331 gcaaggggtcagatacttggagaagatggggtgcgtgtccacagtatggttctaccaggc 930272 Query: 739 cttgcctcaagcacatcagtcgttttgtcaggccccggagaggt 782 ||||| || ||||||||| || || |||||||| |||||||| Sbjct: 930271 cttgcttccagcacatcaatcaacttctcaggccctggagaggt 930228 Score = 71.9 bits (36), Expect = 5e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 350 taagcggcatggatgaagccctggagatcccggtgctcaatgacctcaccatggttctcg 409 |||| |||||||| ||||||||||| || |||||||||||||| ||||| |||||||| | Sbjct: 984549 taagtggcatggaagaagccctggaaattccggtgctcaatgatctcacaatggttctgg 984608 Query: 410 gctc 413 |||| Sbjct: 984609 gctc 984612 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 355 ggcatggatgaagccctggagatcccggtgctcaatgacctcaccatggttctcggctc 413 |||||||| |||||| |||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 931784 ggcatggaagaagccttggaaattccggtgctcaatgatctcacaatggttctcggctc 931726 Score = 67.9 bits (34), Expect = 8e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 818 gcctaatgccagggctaattctggcaatacggaaggtgatacggttgaag 867 |||| |||||||| |||||||||||||||||||||||| |||| |||||| Sbjct: 930108 gcctgatgccaggactaattctggcaatacggaaggtggtacgcttgaag 930059 Score = 65.9 bits (33), Expect = 3e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 866 agaacttgatttatggcctggagaagttcttgtagga 902 |||||||||||||||| |||||||||||||||||||| Sbjct: 986399 agaacttgatttatggtctggagaagttcttgtagga 986435 Score = 58.0 bits (29), Expect = 8e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 679 gcaagaggccaggtactcggagaagatggagtgcgtgtgcacagcatggttcttccaggg 738 ||||| || ||| |||| ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 986052 gcaaggggtcagatacttggagaagatggggtgcgtgtccacagtatggttctaccaggc 986111 Query: 739 cttgc 743 ||||| Sbjct: 986112 cttgc 986116 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 866 agaacttgatttatggcctggagaagttcttgtag 900 |||||||||||||||| || ||||||||||||||| Sbjct: 929990 agaacttgatttatggtctcgagaagttcttgtag 929956
>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11, complete sequence Length = 126827 Score = 109 bits (55), Expect = 2e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 589 ttgccatcgccagatgcaatacagattgcgaataacatatctgatcttggtcagatatac 648 |||||||||| |||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 5997 ttgccatcgcaagatgcaatacagattgcaaataatataacagatcttggtcagatatac 6056 Query: 649 aaccgacaagatatggattccgataatccag 679 ||| | |||||||||| ||||||||||||| Sbjct: 6057 aacagggaagatatggactccgataatccag 6087 Score = 103 bits (52), Expect = 1e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 487 caggcagcagcatttggcttaagcagtgttgtatacgttccgaaaatcgagatggatacg 546 |||||||| |||||||| |||| |||||| || |||||||| ||||| ||| | ||||| Sbjct: 5434 caggcagcggcatttggtttaaacagtgtggtgtacgttccaaaaattgagttagataca 5493 Query: 547 gtaactgaactgtcagcattctgcgacaaggcaagcatgg 586 |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 5494 gtaactgagctgtcagcattctgcgagaaggcaagcatgg 5533 Score = 75.8 bits (38), Expect = 3e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 421 cagacaagagcaactggcgtggttgttgatttcagtgaaccttcatctgtctatgacaat 480 ||||| ||||||||||| ||||| |||||||| |||||||||||| |||| ||||| ||| Sbjct: 4939 cagaccagagcaactggagtggtggttgattttagtgaaccttcaactgtttatgataat 4998 Query: 481 gtcaagcagg 490 ||||| |||| Sbjct: 4999 gtcaaacagg 5008 Score = 75.8 bits (38), Expect = 3e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 818 gcctaatgccagggctaattctggcaatacggaaggtgatacggttgaag 867 ||||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 6493 gcctaatgccaggattaattctggcaatacggaaggtgatacgcttgaag 6542 Score = 71.9 bits (36), Expect = 5e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 350 taagcggcatggatgaagccctggagatcccggtgctcaatgacctcaccatggttctcg 409 |||| |||||||| ||||||||||| || |||||||||||||| ||||| |||||||| | Sbjct: 4766 taagtggcatggaagaagccctggaaattccggtgctcaatgatctcacaatggttctgg 4825 Query: 410 gctc 413 |||| Sbjct: 4826 gctc 4829 Score = 65.9 bits (33), Expect = 3e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 866 agaacttgatttatggcctggagaagttcttgtagga 902 |||||||||||||||| |||||||||||||||||||| Sbjct: 6616 agaacttgatttatggtctggagaagttcttgtagga 6652 Score = 58.0 bits (29), Expect = 8e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 679 gcaagaggccaggtactcggagaagatggagtgcgtgtgcacagcatggttcttccaggg 738 ||||| || ||| |||| ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 6269 gcaaggggtcagatacttggagaagatggggtgcgtgtccacagtatggttctaccaggc 6328 Query: 739 cttgc 743 ||||| Sbjct: 6329 cttgc 6333
>ref|NM_001055299.1| Oryza sativa (japonica cultivar-group) Os03g0116900 (Os03g0116900) mRNA, complete cds Length = 5679 Score = 87.7 bits (44), Expect = 9e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 427 agagcaactggcgtggttgttgatttcagtgaaccttcatctgtctatgacaatgtcaag 486 ||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||||| Sbjct: 355 agagcaactggagtggtggttgatttcagtgaaccttcaactgtttatgacaatgtcaaa 296 Query: 487 cagg 490 |||| Sbjct: 295 cagg 292 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 355 ggcatggatgaagccctggagatcccggtgctcaatgacctcaccatggttctcggctc 413 |||||||| |||||| |||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 512 ggcatggaagaagccttggaaattccggtgctcaatgatctcacaatggttctcggctc 454
>dbj|AK121611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043A05, full insert sequence Length = 5680 Score = 87.7 bits (44), Expect = 9e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 427 agagcaactggcgtggttgttgatttcagtgaaccttcatctgtctatgacaatgtcaag 486 ||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||||| Sbjct: 356 agagcaactggagtggtggttgatttcagtgaaccttcaactgtttatgacaatgtcaaa 297 Query: 487 cagg 490 |||| Sbjct: 296 cagg 293 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 355 ggcatggatgaagccctggagatcccggtgctcaatgacctcaccatggttctcggctc 413 |||||||| |||||| |||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 513 ggcatggaagaagccttggaaattccggtgctcaatgatctcacaatggttctcggctc 455
>dbj|AK108640.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-H12, full insert sequence Length = 1198 Score = 75.8 bits (38), Expect = 3e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 421 cagacaagagcaactggcgtggttgttgatttcagtgaaccttcatctgtctatgacaat 480 ||||| ||||||||||| ||||| |||||||| |||||||||||| |||| ||||| ||| Sbjct: 479 cagaccagagcaactggagtggtggttgattttagtgaaccttcaactgtttatgataat 420 Query: 481 gtcaagcagg 490 ||||| |||| Sbjct: 419 gtcaaacagg 410 Score = 71.9 bits (36), Expect = 5e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 350 taagcggcatggatgaagccctggagatcccggtgctcaatgacctcaccatggttctcg 409 |||| |||||||| ||||||||||| || |||||||||||||| ||||| |||||||| | Sbjct: 652 taagtggcatggaagaagccctggaaattccggtgctcaatgatctcacaatggttctgg 593 Query: 410 gctc 413 |||| Sbjct: 592 gctc 589
>emb|CT832188.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI011N01, full insert sequence Length = 571 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 173 tctcctgctccgccgcctcctcc 195 ||||||||||||||||||||||| Sbjct: 40 tctcctgctccgccgcctcctcc 62
>ref|NM_001064671.1| Oryza sativa (japonica cultivar-group) Os06g0634300 (Os06g0634300) mRNA, complete cds Length = 1314 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 173 tctcctgctccgccgcctcctcc 195 ||||||||||||||||||||||| Sbjct: 37 tctcctgctccgccgcctcctcc 59
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 148 gggaggaggagcgcggcggcgag 170 ||||||||||||||||||||||| Sbjct: 14992 gggaggaggagcgcggcggcgag 15014
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 148 gggaggaggagcgcggcggcgag 170 ||||||||||||||||||||||| Sbjct: 126510 gggaggaggagcgcggcggcgag 126532
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 148 gggaggaggagcgcggcggcgag 170 ||||||||||||||||||||||| Sbjct: 22326306 gggaggaggagcgcggcggcgag 22326284
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 173 tctcctgctccgccgcctcctcc 195 ||||||||||||||||||||||| Sbjct: 25338451 tctcctgctccgccgcctcctcc 25338429
>emb|AL358234.14| Human DNA sequence from clone RP11-164A7 on chromosome 10 Contains the 5' end of the WAC gene for WW domain-containing adapter with a coiled-coil region (PRO1741, FLJ31290, KIAA1844, MGC10753), the 5' end of a novel gene and a CpG island, complete sequence Length = 103930 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 174 ctcctgctccgccgcctcctccc 196 ||||||||||||||||||||||| Sbjct: 89517 ctcctgctccgccgcctcctccc 89495
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 173 tctcctgctccgccgcctcctcc 195 ||||||||||||||||||||||| Sbjct: 12460 tctcctgctccgccgcctcctcc 12438
>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0505A04 Length = 159241 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 173 tctcctgctccgccgcctcctcc 195 ||||||||||||||||||||||| Sbjct: 157059 tctcctgctccgccgcctcctcc 157037
>dbj|AK072100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J21, full insert sequence Length = 1317 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 173 tctcctgctccgccgcctcctcc 195 ||||||||||||||||||||||| Sbjct: 41 tctcctgctccgccgcctcctcc 63
>gb|AC115823.18| Mus musculus chromosome 5, clone RP23-422P4, complete sequence Length = 185311 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 483 caagcaggcagcagcatttggct 505 ||||||||||||||||||||||| Sbjct: 6120 caagcaggcagcagcatttggct 6142
>gb|AC115901.8| Mus musculus chromosome 5, clone RP24-465E5, complete sequence Length = 219828 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 483 caagcaggcagcagcatttggct 505 ||||||||||||||||||||||| Sbjct: 196361 caagcaggcagcagcatttggct 196383
>dbj|AB051576.1| Hemicentrotus pulcherrimus mRNA for ryanodine receptor, complete cds Length = 16879 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 169 agtgtctcctgctccgccgcctcctcc 195 |||| |||||||||||||||||||||| Sbjct: 14865 agtgcctcctgctccgccgcctcctcc 14839
>ref|XM_001220716.1| Chaetomium globosum CBS 148.51 predicted protein (CHGG_01496) mRNA, complete cds Length = 321 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 180 ctccgccgcctcctcccaggcgccgccgtcgcag 213 |||||||| |||||||||| || ||||||||||| Sbjct: 186 ctccgccgactcctcccagccgtcgccgtcgcag 219
>ref|NM_000797.2| Homo sapiens dopamine receptor D4 (DRD4), mRNA Length = 1360 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 gaccaaggagatggggagggcg 264 |||||||||||||||||||||| Sbjct: 1307 gaccaaggagatggggagggcg 1328
>gb|L12397.1|HUMD4G Homo sapiens Dopamine D4 receptor (DRD4) gene, partial cds Length = 3951 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 gaccaaggagatggggagggcg 264 |||||||||||||||||||||| Sbjct: 3820 gaccaaggagatggggagggcg 3841
>gb|L12398.1|HUMD4C Homo sapiens dopamine receptor D4 (DRD4) mRNA, complete cds Length = 1504 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 gaccaaggagatggggagggcg 264 |||||||||||||||||||||| Sbjct: 1451 gaccaaggagatggggagggcg 1472
>gb|AC011325.17| Homo sapiens 3 BAC RP11-17P4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 148095 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 896 tgtaggaaacggtcagctcaca 917 |||||||||||||||||||||| Sbjct: 51797 tgtaggaaacggtcagctcaca 51776
>dbj|AB194902.1| Chlamydomonas reinhardtii LSP1 gene for putative signal transducer for phototaxis, complete cds Length = 6480 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 182 ccgccgcctcctcccaggcgccgccg 207 |||||||| ||||||||||||||||| Sbjct: 5490 ccgccgccacctcccaggcgccgccg 5465
>gb|AC138374.2| Homo sapiens chromosome 11, clone CTD-2647G13, complete sequence Length = 196424 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 gaccaaggagatggggagggcg 264 |||||||||||||||||||||| Sbjct: 156812 gaccaaggagatggggagggcg 156833
>gb|AC131934.13| Homo sapiens chromosome 11, clone RP11-754B17, complete sequence Length = 154813 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 gaccaaggagatggggagggcg 264 |||||||||||||||||||||| Sbjct: 109947 gaccaaggagatggggagggcg 109926
>dbj|AP006284.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-496I9, complete sequence Length = 104658 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 gaccaaggagatggggagggcg 264 |||||||||||||||||||||| Sbjct: 99367 gaccaaggagatggggagggcg 99388
>dbj|AB065765.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_328 Length = 3699 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 gaccaaggagatggggagggcg 264 |||||||||||||||||||||| Sbjct: 3546 gaccaaggagatggggagggcg 3567
>gb|CP000461.1| Burkholderia cenocepacia HI2424 plasmid 1, complete sequence Length = 164857 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 562 gcattctgcgacaaggcaagc 582 ||||||||||||||||||||| Sbjct: 114538 gcattctgcgacaaggcaagc 114518
>emb|CT830483.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA114G15, full insert sequence Length = 1207 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 ggtcgccgccgggaggaggag 158 ||||||||||||||||||||| Sbjct: 115 ggtcgccgccgggaggaggag 95
>emb|CT831385.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA019G24, full insert sequence Length = 1148 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gaggaggagcgcggcggcgag 170 ||||||||||||||||||||| Sbjct: 129 gaggaggagcgcggcggcgag 109
>dbj|AK240738.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J043034B12, full insert sequence Length = 2380 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 gaggaggagcgcggcggcgag 170 ||||||||||||||||||||| Sbjct: 2299 gaggaggagcgcggcggcgag 2319
>gb|CP000468.1| Escherichia coli APEC O1, complete genome Length = 5082025 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 871 ttgatttatggcctggagaagttct 895 ||||||||||||| ||||||||||| Sbjct: 4665235 ttgatttatggccgggagaagttct 4665211
>ref|NM_001070338.1| Oryza sativa (japonica cultivar-group) Os09g0539200 (Os09g0539200) mRNA, complete cds Length = 2999 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 ccgggaggaggagcgcggcggcgag 170 |||||||||| |||||||||||||| Sbjct: 175 ccgggaggagcagcgcggcggcgag 151
>ref|NM_001066408.1| Oryza sativa (japonica cultivar-group) Os07g0537300 (Os07g0537300) mRNA, complete cds Length = 2097 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gaggaggagcgcggcggcgag 170 ||||||||||||||||||||| Sbjct: 48 gaggaggagcgcggcggcgag 28
>ref|NM_001062393.1| Oryza sativa (japonica cultivar-group) Os05g0481000 (Os05g0481000) mRNA, partial cds Length = 1264 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 ggtcgccgccgggaggaggag 158 ||||||||||||||||||||| Sbjct: 117 ggtcgccgccgggaggaggag 97
>ref|NM_001054832.1| Oryza sativa (japonica cultivar-group) Os02g0778600 (Os02g0778600) mRNA, complete cds Length = 2276 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 cgccgggaggaggagcgcggcggcg 168 ||||| ||||||||||||||||||| Sbjct: 142 cgccgcgaggaggagcgcggcggcg 118
>ref|NM_001050115.1| Oryza sativa (japonica cultivar-group) Os01g0616800 (Os01g0616800) mRNA, complete cds Length = 1077 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 ccgggaggaggagcgcggcgg 166 ||||||||||||||||||||| Sbjct: 273 ccgggaggaggagcgcggcgg 253
>ref|XM_001136517.1| PREDICTED: Pan troglodytes hypothetical protein LOC736548 (LOC736548), mRNA Length = 780 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 cctgctccgccgcctcctccc 196 ||||||||||||||||||||| Sbjct: 408 cctgctccgccgcctcctccc 428
>gb|CP000390.1| Mesorhizobium sp. BNC1, complete genome Length = 4412446 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 gagggcggcgatcgcggcggt 278 ||||||||||||||||||||| Sbjct: 2400944 gagggcggcgatcgcggcggt 2400924
>ref|XM_001108626.1| PREDICTED: Macaca mulatta similar to WNK lysine deficient protein kinase 2 (LOC717275), mRNA Length = 6534 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 182 ccgccgcctcctcccaggcgccgccgtcg 210 ||||||||||||||| || |||||||||| Sbjct: 400 ccgccgcctcctccctggggccgccgtcg 372
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 871 ttgatttatggcctggagaagttct 895 ||||||||||||| ||||||||||| Sbjct: 4592934 ttgatttatggccgggagaagttct 4592910
>ref|NM_006648.3| Homo sapiens WNK lysine deficient protein kinase 2 (WNK2), mRNA Length = 6834 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 182 ccgccgcctcctcccaggcgccgccgtcg 210 ||||||||||||||| || |||||||||| Sbjct: 445 ccgccgcctcctccctggggccgccgtcg 417
>gb|AE009200.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 226 of 256 of the complete sequence Length = 10654 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 caaggtggtcatcgtcggcgc 242 ||||||||||||||||||||| Sbjct: 6284 caaggtggtcatcgtcggcgc 6304
>ref|XM_545691.2| PREDICTED: Canis familiaris similar to ETS domain protein Elk-4 (Serum response factor accessory protein 1) (SAP-1) (LOC488574), mRNA Length = 1242 Score = 42.1 bits (21), Expect = 4.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 248 aggagatggggagggcggcgatcgcggcggtga 280 |||| |||||| ||||||||| ||||||||||| Sbjct: 712 aggaaatggggggggcggcgaacgcggcggtga 680
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 caaggtggtcatcgtcggcgc 242 ||||||||||||||||||||| Sbjct: 2511151 caaggtggtcatcgtcggcgc 2511171
>ref|NM_001001692.1| Homo sapiens FLJ45139 protein (FLJ45139), mRNA dbj|AK127082.1| Homo sapiens cDNA FLJ45139 fis, clone BRAWH3039623 Length = 3822 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1039 cagttttggaaaagagtttgg 1059 ||||||||||||||||||||| Sbjct: 3249 cagttttggaaaagagtttgg 3269
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 871 ttgatttatggcctggagaagttct 895 ||||||||||||| ||||||||||| Sbjct: 4877728 ttgatttatggccgggagaagttct 4877704
>emb|AL954222.1| Pan troglodytes chromosome 22 clone q21.2, complete sequence Length = 208827 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1039 cagttttggaaaagagtttgg 1059 ||||||||||||||||||||| Sbjct: 57946 cagttttggaaaagagtttgg 57926
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gaggaggagcgcggcggcgag 170 ||||||||||||||||||||| Sbjct: 24245570 gaggaggagcgcggcggcgag 24245550
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 ccgggaggaggagcgcggcggcgag 170 |||||||||| |||||||||||||| Sbjct: 20928973 ccgggaggagcagcgcggcggcgag 20928949
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gaggaggagcgcggcggcgag 170 ||||||||||||||||||||| Sbjct: 21067794 gaggaggagcgcggcggcgag 21067774
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 ggtcgccgccgggaggaggag 158 ||||||||||||||||||||| Sbjct: 23499090 ggtcgccgccgggaggaggag 23499070
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 cgccgggaggaggagcgcggcggcg 168 ||||| ||||||||||||||||||| Sbjct: 32980605 cgccgcgaggaggagcgcggcggcg 32980581
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 ccgggaggaggagcgcggcgg 166 ||||||||||||||||||||| Sbjct: 24492571 ccgggaggaggagcgcggcgg 24492551
>emb|AL163278.2|HS21C078 Homo sapiens chromosome 21 segment HS21C078 Length = 340000 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1039 cagttttggaaaagagtttgg 1059 ||||||||||||||||||||| Sbjct: 62230 cagttttggaaaagagtttgg 62210
>dbj|AB062819.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:BCf4-02 Length = 1381 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 841 gcaatacggaaggtgatacgg 861 ||||||||||||||||||||| Sbjct: 78 gcaatacggaaggtgatacgg 98
>emb|AL390760.25| Human DNA sequence from clone RP11-370F5 on chromosome 9 Contains the 3' emd of novel gene (MGC11115), the NINJ1 gene for ninjurin 1, a novel gene, the 5' end of the PRKWNK2 gene for protein kinase, lysine deficient 2 (WNK2, NY-CO-43, SDCCAG43, P/OKcl.13) and two CpG islands, complete sequence Length = 175797 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 182 ccgccgcctcctcccaggcgccgccgtcg 210 ||||||||||||||| || |||||||||| Sbjct: 86371 ccgccgcctcctccctggggccgccgtcg 86343
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gaggaggagcgcggcggcgag 170 ||||||||||||||||||||| Sbjct: 4776736 gaggaggagcgcggcggcgag 4776716
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tccgccgcctcctcccaggcg 201 ||||||||||||||||||||| Sbjct: 188946 tccgccgcctcctcccaggcg 188966
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 255 ggggagggcggcgatcgcggcggtg 279 |||| |||||||||||||||||||| Sbjct: 245010 ggggcgggcggcgatcgcggcggtg 244986
>emb|AJ242724.4|HSA242724 Homo sapiens mRNA for putative mitogen-activated protein kinase kinase kinase (PRKWNK2 gene), splice variant KIAA1760-related Length = 6894 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 182 ccgccgcctcctcccaggcgccgccgtcg 210 ||||||||||||||| || |||||||||| Sbjct: 445 ccgccgcctcctccctggggccgccgtcg 417
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gaggaggagcgcggcggcgag 170 ||||||||||||||||||||| Sbjct: 111093 gaggaggagcgcggcggcgag 111073
>gb|AF322013.1|AF322012S2 Bradyrhizobium japonicum symbiotic gene region, part 2 of 2 Length = 230573 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 cggcgatcgcggcggtgaaca 283 ||||||||||||||||||||| Sbjct: 37342 cggcgatcgcggcggtgaaca 37322
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 cgccgggaggaggagcgcggcggcg 168 ||||| ||||||||||||||||||| Sbjct: 26545 cgccgcgaggaggagcgcggcggcg 26521
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 cggcgatcgcggcggtgaaca 283 ||||||||||||||||||||| Sbjct: 2095827 cggcgatcgcggcggtgaaca 2095807
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 ccgggaggaggagcgcggcgg 166 ||||||||||||||||||||| Sbjct: 72955 ccgggaggaggagcgcggcgg 72935
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 ccgggaggaggagcgcggcggcgag 170 |||||||||| |||||||||||||| Sbjct: 21062 ccgggaggagcagcgcggcggcgag 21038
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gaggaggagcgcggcggcgag 170 ||||||||||||||||||||| Sbjct: 111909 gaggaggagcgcggcggcgag 111889
>dbj|AK119414.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-F12, full insert sequence Length = 2998 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 ccgggaggaggagcgcggcggcgag 170 |||||||||| |||||||||||||| Sbjct: 174 ccgggaggagcagcgcggcggcgag 150
>dbj|AK111368.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-A02, full insert sequence Length = 1107 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 ccgggaggaggagcgcggcgg 166 ||||||||||||||||||||| Sbjct: 303 ccgggaggaggagcgcggcgg 283
>dbj|AK106971.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-G05, full insert sequence Length = 2276 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 cgccgggaggaggagcgcggcggcg 168 ||||| ||||||||||||||||||| Sbjct: 142 cgccgcgaggaggagcgcggcggcg 118
>dbj|AK104449.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-A12, full insert sequence Length = 1122 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 ggtcgccgccgggaggaggag 158 ||||||||||||||||||||| Sbjct: 116 ggtcgccgccgggaggaggag 96
>dbj|AK100190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035K01, full insert sequence Length = 1719 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 cgccgggaggaggagcgcggcggcg 168 ||||| ||||||||||||||||||| Sbjct: 131 cgccgcgaggaggagcgcggcggcg 107
>dbj|AK100098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004D19, full insert sequence Length = 1737 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 cgccgggaggaggagcgcggcggcg 168 ||||| ||||||||||||||||||| Sbjct: 148 cgccgcgaggaggagcgcggcggcg 124
>dbj|AK068619.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157F02, full insert sequence Length = 1267 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 ggtcgccgccgggaggaggag 158 ||||||||||||||||||||| Sbjct: 120 ggtcgccgccgggaggaggag 100
>dbj|AK059369.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-E11, full insert sequence Length = 1198 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 ggtcgccgccgggaggaggag 158 ||||||||||||||||||||| Sbjct: 120 ggtcgccgccgggaggaggag 100
>gb|AC009542.2|AC009542 Homo sapiens clone RP11-260N14 from 7q31, complete sequence Length = 160367 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1041 gttttggaaaagagtttggct 1061 ||||||||||||||||||||| Sbjct: 68130 gttttggaaaagagtttggct 68110
>gb|AC009330.5|AC009330 Homo sapiens clone RP11-83M17 from 7q31, complete sequence Length = 174768 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1041 gttttggaaaagagtttggct 1061 ||||||||||||||||||||| Sbjct: 65303 gttttggaaaagagtttggct 65283
>dbj|AB051547.2| Homo sapiens mRNA for KIAA1760 protein, partial cds Length = 7792 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 182 ccgccgcctcctcccaggcgccgccgtcg 210 ||||||||||||||| || |||||||||| Sbjct: 432 ccgccgcctcctccctggggccgccgtcg 404
>gb|AC153877.5| Mus musculus 6 BAC RP23-258E21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232977 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1038 acagttttggaaaagagtttg 1058 ||||||||||||||||||||| Sbjct: 64976 acagttttggaaaagagtttg 64956
>gb|AC127309.4| Mus musculus BAC clone RP23-296L9 from 9, complete sequence Length = 188083 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1174 aaactctaggagaaaaattat 1194 ||||||||||||||||||||| Sbjct: 128789 aaactctaggagaaaaattat 128809
>gb|AF017257.1|AF017257 Homo sapiens chromosome 21 derived BAC containing erythroblastosis virus oncogene homolog 2 protein (ets-2) gene, complete cds, complete sequence Length = 101569 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1039 cagttttggaaaagagtttgg 1059 ||||||||||||||||||||| Sbjct: 100139 cagttttggaaaagagtttgg 100119
>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0095J22, complete sequence Length = 151730 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 ggtcgccgccgggaggaggag 158 ||||||||||||||||||||| Sbjct: 34814 ggtcgccgccgggaggaggag 34794
>dbj|AP001043.1| Homo sapiens genomic DNA, chromosome 21, clone:c102G11119, ERG-ETS2 region, complete sequence Length = 46212 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1039 cagttttggaaaagagtttgg 1059 ||||||||||||||||||||| Sbjct: 11524 cagttttggaaaagagtttgg 11504
>dbj|AP001042.1| Homo sapiens genomic DNA, chromosome 21, clone:Q12C7, ERG-ETS2 region, complete sequence Length = 38975 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1039 cagttttggaaaagagtttgg 1059 ||||||||||||||||||||| Sbjct: 34098 cagttttggaaaagagtttgg 34078
>dbj|AB044546.1| Homo sapiens P/OKcl.13 mRNA for mitogen-activated protein kinase kinase kinase, partial cds Length = 2404 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 182 ccgccgcctcctcccaggcgccgccgtcg 210 ||||||||||||||| || |||||||||| Sbjct: 469 ccgccgcctcctccctggggccgccgtcg 441
>dbj|AB079849.1| Shewanella algae gene for sphingolipid ceramide N-deacylase, complete cds, strain:G8 Length = 2979 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 cgaccagaccccgcaccggca 85 ||||||||||||||||||||| Sbjct: 655 cgaccagaccccgcaccggca 635
>dbj|AB079850.1| Shewanella algae gene for sphingolipid ceramide N-deacylase, complete cds, strain:NS589 Length = 2979 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 cgaccagaccccgcaccggca 85 ||||||||||||||||||||| Sbjct: 655 cgaccagaccccgcaccggca 635 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 208,903,428 Number of extensions: 10761790 Number of successful extensions: 221101 Number of sequences better than 10.0: 93 Number of HSP's gapped: 221101 Number of HSP's successfully gapped: 132 Length of query: 1234 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1211 Effective length of database: 18,503,978,556 Effective search space: 22408318031316 Effective search space used: 22408318031316 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)