ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf164c18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK106225:Os02g0147800 | 31 | 1.1 | 2 | AK098855:Os02g0147800 | 31 | 1.1 | 3 | AK070502:Os02g0147800 | 31 | 1.1 | 4 | AK065257:Os02g0147800 | 31 | 1.1 | 5 | Os11g0168500:Os11g0168500 | 31 | 1.1 | 6 | Os01g0556600:Os01g0556600 | 31 | 1.4 | 7 | AK103515:Os02g0664300 | 31 | 1.4 | 8 | AK067099:Os02g0664300 | 31 | 1.4 | 9 | Os03g0121800:Os03g0121800 | 30 | 3.1 | 10 | AK073764:Os10g0548300 | 24 | 6.4 | 11 | AK108201:Os10g0463200 | 28 | 6.9 | 12 | AK101830:Os07g0557500 | 25 | 8.2 | 13 | AK067121:Os07g0557500 | 25 | 8.9 | 14 | AK069161:Os02g0167500 | 28 | 9.0 | 15 | Os06g0549300:Os06g0549300 | 28 | 9.1 | 16 | AK107192:Os05g0319700 | 28 | 9.1 | 17 | AK102535:Os01g0679200 | 28 | 9.1 |
|---|
>AK106225:Os02g0147800 | Length = 407 Score = 31.2 bits (69), Expect = 1.1 Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 12/113 (10%) Frame = +3 Query: 381 EIPLHPKCCSPEF*AVIDVVAAGE-CLHLHQLQNLLVSAPACL-----FQCGSSQDAVDG 542 ++ H KC P F ++ G C H +L + A L +C SS + Sbjct: 220 KLACHQKCLEPPFDKILPTTRHGRLCKHCSSKMKILDAINAHLGTSFTVKCPSSDIFKEA 279 Query: 543 TTSFIRRRGEGDLM------DEEYDSESNA*RSPGQSCDLGVCRCIISPLPPP 683 F G G DE+YD E N S G+ C SPL P Sbjct: 280 AEHFNSDDGLGQDWLSEYSGDEDYDPEENEASSSGEENKSADSNCSGSPLYSP 332
>AK098855:Os02g0147800 | Length = 681 Score = 31.2 bits (69), Expect = 1.1 Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 12/113 (10%) Frame = +3 Query: 381 EIPLHPKCCSPEF*AVIDVVAAGE-CLHLHQLQNLLVSAPACL-----FQCGSSQDAVDG 542 ++ H KC P F ++ G C H +L + A L +C SS + Sbjct: 220 KLACHQKCLEPPFDKILPTTRHGRLCKHCSSKMKILDAINAHLGTSFTVKCPSSDIFKEA 279 Query: 543 TTSFIRRRGEGDLM------DEEYDSESNA*RSPGQSCDLGVCRCIISPLPPP 683 F G G DE+YD E N S G+ C SPL P Sbjct: 280 AEHFNSDDGLGQDWLSEYSGDEDYDPEENEASSSGEENKSADSNCSGSPLYSP 332
>AK070502:Os02g0147800 | Length = 681 Score = 31.2 bits (69), Expect = 1.1 Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 12/113 (10%) Frame = +3 Query: 381 EIPLHPKCCSPEF*AVIDVVAAGE-CLHLHQLQNLLVSAPACL-----FQCGSSQDAVDG 542 ++ H KC P F ++ G C H +L + A L +C SS + Sbjct: 220 KLACHQKCLEPPFDKILPTTRHGRLCKHCSSKMKILDAINAHLGTSFTVKCPSSDIFKEA 279 Query: 543 TTSFIRRRGEGDLM------DEEYDSESNA*RSPGQSCDLGVCRCIISPLPPP 683 F G G DE+YD E N S G+ C SPL P Sbjct: 280 AEHFNSDDGLGQDWLSEYSGDEDYDPEENEASSSGEENKSADSNCSGSPLYSP 332
>AK065257:Os02g0147800 | Length = 681 Score = 31.2 bits (69), Expect = 1.1 Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 12/113 (10%) Frame = +3 Query: 381 EIPLHPKCCSPEF*AVIDVVAAGE-CLHLHQLQNLLVSAPACL-----FQCGSSQDAVDG 542 ++ H KC P F ++ G C H +L + A L +C SS + Sbjct: 220 KLACHQKCLEPPFDKILPTTRHGRLCKHCSSKMKILDAINAHLGTSFTVKCPSSDIFKEA 279 Query: 543 TTSFIRRRGEGDLM------DEEYDSESNA*RSPGQSCDLGVCRCIISPLPPP 683 F G G DE+YD E N S G+ C SPL P Sbjct: 280 AEHFNSDDGLGQDWLSEYSGDEDYDPEENEASSSGEENKSADSNCSGSPLYSP 332
>Os11g0168500:Os11g0168500 | Length = 318 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = +1 Query: 436 WWPPASASTSISCRTSL*VHPHASSSVVRRRMPSTALRASSAAE 567 WWPPA + + TS H HA++ + P+T+ +S E Sbjct: 66 WWPPAYGAAPLPPSTSPASHEHAAAMAAGQYAPATSSAMASPRE 109
>Os01g0556600:Os01g0556600 | Length = 1932 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/64 (29%), Positives = 30/64 (46%) Frame = -2 Query: 572 FTSAADEARSAVDGILRRTTLEEACGCTHKEVLQLMEVEALAGGHHIDDSSKLRRAAFRV 393 F+ + ++ VD I R + + + G + Q + A+ G HHI D S R AA+ Sbjct: 1764 FSDRKETSQLLVDIIYRDSVVVKVLGAGNPSTTQ---ISAMVGEHHIQDLSVFRLAAWTT 1820 Query: 392 QRDL 381 DL Sbjct: 1821 NCDL 1824
>AK103515:Os02g0664300 | Length = 1087 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +1 Query: 430 SMWWPPASASTSISCRTSL*VHPHASSSVVRRRMPSTALRASSAAE 567 S W PA+AS + T+ P S+ V R MPS++ SAAE Sbjct: 32 SAWSVPAAASNVAAASTTTRGGPSPSAGVAPRAMPSSSSSPPSAAE 77
>AK067099:Os02g0664300 | Length = 1359 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +1 Query: 430 SMWWPPASASTSISCRTSL*VHPHASSSVVRRRMPSTALRASSAAE 567 S W PA+AS + T+ P S+ V R MPS++ SAAE Sbjct: 32 SAWSVPAAASNVAAASTTTRGGPSPSAGVAPRAMPSSSSSPPSAAE 77
>Os03g0121800:Os03g0121800 | Length = 1883 Score = 29.6 bits (65), Expect = 3.1 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +1 Query: 589 KSMIASPMPRGVP-VSLVILESAVVLFHHFRHHK*IVKPHSHACHVVVLKPCHFALMWHA 765 K M+A + VP V V++ +A +L + RH I+K A H+++L CH A+ H Sbjct: 313 KKMLAVFLVPKVPLVYQVLVMTAQILLNILRHS--IIK--MDAIHLLILDECHHAVKKHP 368 Query: 766 YIL 774 Y L Sbjct: 369 YSL 371
>AK073764:Os10g0548300 | Length = 652 Score = 24.3 bits (51), Expect(2) = 6.4 Identities = 13/63 (20%), Positives = 26/63 (41%) Frame = -2 Query: 566 SAADEARSAVDGILRRTTLEEACGCTHKEVLQLMEVEALAGGHHIDDSSKLRRAAFRVQR 387 S+ D + + +L + GC + ++L + ++S L+ A +Q Sbjct: 115 SSVDSCKVDLQSLLEPNIEAKRLGCMYINEMELRKETEAKLSQEKEESESLKHATMVLQN 174 Query: 386 DLD 378 DLD Sbjct: 175 DLD 177 Score = 22.7 bits (47), Expect(2) = 6.4 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = -3 Query: 814 GYITMVMGSSTARIKCRHATSERSDTA*VLLHGKHGSEA*LFICGG 677 G +VMG+++ R R + +S TA ++ H FIC G Sbjct: 47 GVTKLVMGAASDRHYKRKMKAPQSQTAISVMQRAHSYCNIWFICNG 92
>AK108201:Os10g0463200 | Length = 390 Score = 28.5 bits (62), Expect = 6.9 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -1 Query: 324 RILLARTGPLGCIHMGKFCRGPKQIGRPEAGKKA-LQRP--SEGFGEVMVRCGSFGGYTL 154 R+L+ TGPLGC + RG P+ + A L P S GE+ R G G + Sbjct: 212 RVLVTGTGPLGCAPAERALRGRGGGCAPQVMRAAELFNPQLSRALGEMNARVGRPGAFMA 271 Query: 153 A 151 A Sbjct: 272 A 272
>AK101830:Os07g0557500 | Length = 693 Score = 24.6 bits (52), Expect(2) = 8.2 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +2 Query: 386 PAAPEMLLAGVLSCHRCGGRR 448 P A M AG +CHRCG ++ Sbjct: 424 PRAMGMSKAGQKTCHRCGMKK 444 Score = 21.9 bits (45), Expect(2) = 8.2 Identities = 9/35 (25%), Positives = 14/35 (40%) Frame = +3 Query: 474 QNLLVSAPACLFQCGSSQDAVDGTTSFIRRRGEGD 578 +++ P C CG Q + T I + GD Sbjct: 474 KDIKTRCPVCRGSCGCKQCTLGQTKGAISKESSGD 508
>AK067121:Os07g0557500 | Length = 279 Score = 24.6 bits (52), Expect(2) = 8.9 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +2 Query: 386 PAAPEMLLAGVLSCHRCGGRR 448 P A M AG +CHRCG ++ Sbjct: 10 PRAMGMSKAGQKTCHRCGMKK 30 Score = 21.9 bits (45), Expect(2) = 8.9 Identities = 9/35 (25%), Positives = 14/35 (40%) Frame = +3 Query: 474 QNLLVSAPACLFQCGSSQDAVDGTTSFIRRRGEGD 578 +++ P C CG Q + T I + GD Sbjct: 60 KDIKTRCPVCRGSCGCKQCTLGQTKGAISKESSGD 94
>AK069161:Os02g0167500 | Length = 889 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 282 CGCIPVAQFLPARSSSSIPSNPR-EDSLSAGLSIEIPLHPK 401 CGC+ A+ R+S + PR EDSL A + PLHPK Sbjct: 284 CGCMNFAR----RTSCFQCNEPRTEDSLPADPTSSTPLHPK 320
>Os06g0549300:Os06g0549300 | Length = 571 Score = 28.1 bits (61), Expect = 9.1 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = +1 Query: 367 QASLSRSRCTRNAARRSFELSSMWWPPASASTSISCRTSL*VHPHASSSVVRRRMPS 537 + ++ + C + +S L W P ++ RTSL A S VRR +PS Sbjct: 362 ELGMTSADCREMSWLQSAALIQFWNPSTPVEALLNRRTSLSTFTKAKSDYVRRAIPS 418
>AK107192:Os05g0319700 | Length = 478 Score = 28.1 bits (61), Expect = 9.1 Identities = 21/84 (25%), Positives = 40/84 (47%) Frame = +1 Query: 445 PASASTSISCRTSL*VHPHASSSVVRRRMPSTALRASSAAEVKETSWMKSMIASPMPRGV 624 P+S+S+S S +S +SSS + +T + A++AA T+ + S + +P P Sbjct: 32 PSSSSSSSSSSSSSSSSSSSSSSPATSTV-ATGISAAAAAAANGTAALSSAVPAPPP--- 87 Query: 625 PVSLVILESAVVLFHHFRHHK*IV 696 V++ HH H + ++ Sbjct: 88 ---------VVIVVHHHFHRELVI 102
>AK102535:Os01g0679200 | Length = 234 Score = 28.1 bits (61), Expect = 9.1 Identities = 27/74 (36%), Positives = 32/74 (43%) Frame = +1 Query: 334 SLLTRARIL*VQASLSRSRCTRNAARRSFELSSMWWPPASASTSISCRTSL*VHPHASSS 513 S L R RI SLS S R R E+ + P A AS + CR + PH S Sbjct: 119 SRLLRPRIRRRSLSLSLSLSLRCYFRPQLEIPPLPPPMAKASWADGCRDAR--WPHHGSI 176 Query: 514 VVRRRMPSTALRAS 555 VV R + LR S Sbjct: 177 VVARGRSLSRLRLS 190 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 27,977,666 Number of extensions: 660582 Number of successful extensions: 2322 Number of sequences better than 10.0: 17 Number of HSP's gapped: 2320 Number of HSP's successfully gapped: 20 Length of query: 307 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 207 Effective length of database: 11,395,755 Effective search space: 2358921285 Effective search space used: 2358921285 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
