ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf164c12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os12g0438900:Os12g0438900 | 138 | 3e-33 | 2 | AK059960:Os07g0622900 | 32 | 0.44 | 3 | Os11g0222200:Os11g0222200 | 28 | 4.8 | 4 | Os08g0167000:Os08g0167000 | 28 | 6.3 | 5 | AJ575221:Os03g0425800 | 28 | 6.3 | 6 | AK100427:Os03g0425800 | 28 | 6.3 | 7 | Os09g0513600:Os09g0513600 | 27 | 8.3 | 8 | Os04g0311300:Os04g0311300 | 27 | 8.3 | 9 | AK121420:Os01g0680700 | 27 | 8.3 | 10 | AK120734:Os11g0682500 | 27 | 8.3 | 11 | AK120014:Os01g0680700 | 27 | 8.3 | 12 | AK106904:Os01g0680700 | 27 | 8.3 | 13 | AK100939:Os01g0680700 | 27 | 8.3 | 14 | AK072370:Os11g0656500 | 27 | 8.3 | 15 | AK069463:Os10g0429700 | 27 | 8.3 | 16 | AK067091:Os07g0106100 | 27 | 8.3 |
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>Os12g0438900:Os12g0438900 | Length = 179 Score = 138 bits (348), Expect = 3e-33 Identities = 66/89 (74%), Positives = 70/89 (78%) Frame = +1 Query: 73 AASKMDWQGQKSAEMXXXXXXXXXXXXXXXXGYAMADFQLMLLVYAGGVVLTALVTVPNW 252 A S+MDWQGQK AEM GYAMADFQLMLLVYAGGVVLTALVTVPNW Sbjct: 80 ACSQMDWQGQKLAEMLMQLLLVASAVAAFVVGYAMADFQLMLLVYAGGVVLTALVTVPNW 139 Query: 253 PFFNRHPLKWLDAAEADRHPRPQISSAPA 339 PFFNRHPLKWLDAAEADRHPRPQ+S+ P+ Sbjct: 140 PFFNRHPLKWLDAAEADRHPRPQVSATPS 168
>AK059960:Os07g0622900 | Length = 112 Score = 31.6 bits (70), Expect = 0.44 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = +1 Query: 166 GYAMADFQLMLLVYAGGVVLTALVTVPNWPFFNRHPLKWLDAAEADR 306 G A + Y G++ A V +P+W FF+R +WL A R Sbjct: 22 GVVTASVRKAAATYGFGILAIAGVLLPDWEFFDRDYSQWLTPMPASR 68
>Os11g0222200:Os11g0222200 | Length = 1043 Score = 28.1 bits (61), Expect = 4.8 Identities = 23/51 (45%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = -3 Query: 333 CAADLRAGVAISLGGVEPLERVPVEE-GPVGDGDERREDHPTGVHEQHELE 184 CA DLR A LG E L RV EE G DG HP G E+H E Sbjct: 199 CAVDLRDAAAAVLGRPE-LARVGAEEPGAHSDG------HPHGEGERHNDE 242
>Os08g0167000:Os08g0167000 | Length = 757 Score = 27.7 bits (60), Expect = 6.3 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = -1 Query: 221 TTPPAYTSSMSWKSAIAYPTRNAATADATSSTCISISALFCPCQS 87 ++PP+ TSS S S+ + ATA ++SST S +A+ P S Sbjct: 37 SSPPSTTSSSSSSSSSSSTNSPTATAASSSSTNTSGAAIVHPTTS 81
>AJ575221:Os03g0425800 | Length = 188 Score = 27.7 bits (60), Expect = 6.3 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 6/48 (12%) Frame = -2 Query: 547 DTAFQD--HESRYPDTKKEANFFVIKHSG----NTTSSMSYSEVEQLI 422 +T+F D E+R PD ++ +SG NT+SS+ YS +EQLI Sbjct: 130 ETSFSDLADETREPD-------YIYHNSGISACNTSSSIPYSNLEQLI 170
>AK100427:Os03g0425800 | Length = 563 Score = 27.7 bits (60), Expect = 6.3 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 6/48 (12%) Frame = -2 Query: 547 DTAFQD--HESRYPDTKKEANFFVIKHSG----NTTSSMSYSEVEQLI 422 +T+F D E+R PD ++ +SG NT+SS+ YS +EQLI Sbjct: 171 ETSFSDLADETREPD-------YIYHNSGISACNTSSSIPYSNLEQLI 211
>Os09g0513600:Os09g0513600 | Length = 430 Score = 27.3 bits (59), Expect = 8.3 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = -1 Query: 263 LKKGQLGTVTSAV-RTTPPAYTSSMSWKSAIAYPTRNAATADATSSTCISISALFCPCQS 87 + +GQ VT A R T + + YP + A A ++ C+ + F P S Sbjct: 347 MPRGQQSLVTWATPRLTEDTVKQCVDPRLKGEYPPKGVAKLAAVAALCVQYESEFRPSMS 406 Query: 86 ILLAAL 69 I++ AL Sbjct: 407 IVVKAL 412
>Os04g0311300:Os04g0311300 | Length = 2135 Score = 27.3 bits (59), Expect = 8.3 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +3 Query: 354 EEDREEQVVMLLTGPCV 404 +ED EE +MLLTG CV Sbjct: 320 QEDEEEHTLMLLTGGCV 336
>AK121420:Os01g0680700 | Length = 384 Score = 27.3 bits (59), Expect = 8.3 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -1 Query: 221 TTPPAYTSSMSWKSAIAYPTRNAATA 144 TT +YT + +SA ++PTR+AA A Sbjct: 205 TTTGSYTRGSNLRSASSFPTRSAAAA 230
>AK120734:Os11g0682500 | Length = 1457 Score = 27.3 bits (59), Expect = 8.3 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +3 Query: 354 EEDREEQVVMLLTGPCV 404 +ED EE +MLLTG CV Sbjct: 348 QEDEEEHTLMLLTGGCV 364
>AK120014:Os01g0680700 | Length = 352 Score = 27.3 bits (59), Expect = 8.3 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -1 Query: 221 TTPPAYTSSMSWKSAIAYPTRNAATA 144 TT +YT + +SA ++PTR+AA A Sbjct: 205 TTTGSYTRGSNLRSASSFPTRSAAAA 230
>AK106904:Os01g0680700 | Length = 406 Score = 27.3 bits (59), Expect = 8.3 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -1 Query: 221 TTPPAYTSSMSWKSAIAYPTRNAATA 144 TT +YT + +SA ++PTR+AA A Sbjct: 205 TTTGSYTRGSNLRSASSFPTRSAAAA 230
>AK100939:Os01g0680700 | Length = 384 Score = 27.3 bits (59), Expect = 8.3 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -1 Query: 221 TTPPAYTSSMSWKSAIAYPTRNAATA 144 TT +YT + +SA ++PTR+AA A Sbjct: 205 TTTGSYTRGSNLRSASSFPTRSAAAA 230
>AK072370:Os11g0656500 | Length = 1428 Score = 27.3 bits (59), Expect = 8.3 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +3 Query: 354 EEDREEQVVMLLTGPCV 404 +ED EE +MLLTG CV Sbjct: 348 QEDEEEHTLMLLTGGCV 364
>AK069463:Os10g0429700 | Length = 908 Score = 27.3 bits (59), Expect = 8.3 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +3 Query: 354 EEDREEQVVMLLTGPCV 404 +ED EE +MLLTG CV Sbjct: 348 QEDEEEHTLMLLTGGCV 364
>AK067091:Os07g0106100 | Length = 761 Score = 27.3 bits (59), Expect = 8.3 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = +1 Query: 241 VPNWPFFNRHPLKWLDAAE-ADRHPRPQISS 330 +PN F+N+HP++ + E +DRH R SS Sbjct: 657 LPNLGFYNKHPIRASGSKEVSDRHTRKISSS 687 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,028,475 Number of extensions: 249873 Number of successful extensions: 817 Number of sequences better than 10.0: 16 Number of HSP's gapped: 816 Number of HSP's successfully gapped: 16 Length of query: 205 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 109 Effective length of database: 11,555,919 Effective search space: 1259595171 Effective search space used: 1259595171 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
