No.
Definition
Score (bits)
E Value
1 ref|NM_001066270.1| Oryza sativa (japonica cultivar-group) Os07g...
371
6e-99
2 dbj|AK073959.1| Oryza sativa (japonica cultivar-group) cDNA clon...
371
6e-99
3 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
155
7e-34
4 dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic D...
155
7e-34
5 ref|XM_624969.2| PREDICTED: Apis mellifera similar to cactin CG1...
46
0.45
6 gb|AC124490.4| Mus musculus BAC clone RP23-453I1 from 16, comple...
46
0.45
7 gb|AC134842.3| Mus musculus BAC clone RP24-375P18 from chromosom...
44
1.8
8 emb|AL031285.1|HS58A9 Human DNA sequence from clone RP1-58A9 on ...
44
1.8
9 gb|AC142266.3| Mus musculus BAC clone RP24-380K14 from 14, compl...
44
1.8
10 ref|XM_425716.2| PREDICTED: Gallus gallus similar to additional ...
42
7.0
11 emb|CR774179.7| Zebrafish DNA sequence from clone DKEY-179G5 in ...
42
7.0
12 gb|CP000471.1| Magnetococcus sp. MC-1, complete genome
42
7.0
13 gb|AC190249.3| Pan troglodytes BAC clone CH251-261D2 from chromo...
42
7.0
14 gb|CP000450.1| Nitrosomonas eutropha C71, complete genome
42
7.0
15 gb|BT026364.1| Arabidopsis thaliana At1g29320 mRNA, complete cds
42
7.0
16 gb|AC189542.1| Brassica rapa subsp. pekinensis clone KBrH004B20,...
42
7.0
17 gb|AC189509.1| Brassica rapa subsp. pekinensis clone KBrB089B13,...
42
7.0
18 gb|CP000390.1| Mesorhizobium sp. BNC1, complete genome
42
7.0
19 emb|CR352332.11| Zebrafish DNA sequence from clone CH211-151K15 ...
42
7.0
20 emb|CR925760.12| Zebrafish DNA sequence from clone DKEYP-89A8 in...
42
7.0
21 ref|NM_102672.3| Arabidopsis thaliana nucleotide binding (AT1G29...
42
7.0
22 gb|AY772018.1| Methylophaga aminosulfidovorans strain SK1 putati...
42
7.0
23 gb|U00068.1| Caenorhabditis elegans cosmid W04D12, complete sequ...
42
7.0
24 gb|AC005060.3| Homo sapiens BAC clone CTB-86D3 from 7, complete ...
42
7.0
25 gb|AC144826.2| Danio rerio clone CH211-20C7, complete sequence
42
7.0
26 gb|AY127016.1| Arabidopsis thaliana At1g29320/F28N24_2 mRNA sequ...
42
7.0
27 emb|CR382386.8| Zebrafish DNA sequence from clone DKEY-111O10 in...
42
7.0
28 ref|NM_065858.1| Caenorhabditis elegans W04D12.1 (W04D12.1) mRNA...
42
7.0
29 dbj|AK084616.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu...
42
7.0
30 emb|AL669948.8| Mouse DNA sequence from clone RP23-248K2 on chro...
42
7.0
31 emb|AL121776.19|HSJ1050K3 Human DNA sequence from clone RP5-1050...
42
7.0
32 emb|AL583924.1|MLEPRTN8 Mycobacterium leprae strain TN complete ...
42
7.0
33 emb|AL008609.1|MLCB1788 Mycobacterium leprae cosmid B1788
42
7.0
34 emb|AL645607.9| Mouse DNA sequence from clone RP23-298N21 on chr...
42
7.0
35 gb|AC131210.3| Homo sapiens 3 BAC RP13-635I23 (Roswell Park Canc...
42
7.0
36 emb|BX323012.5| Zebrafish DNA sequence from clone DKEYP-46F3, co...
42
7.0
37 emb|BX324143.9| Zebrafish DNA sequence from clone CH211-197D1 in...
42
7.0
38 gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28...
42
7.0
39 emb|BX814505.1|CNS0ABZ1 Arabidopsis thaliana Full-length cDNA Co...
42
7.0
40 emb|BX815928.1|CNS0ABOX Arabidopsis thaliana Full-length cDNA Co...
42
7.0
41 emb|AL929336.12| Zebrafish DNA sequence from clone CH211-163J21,...
42
7.0
>ref|NM_001066270.1 | Oryza sativa (japonica cultivar-group) Os07g0506700 (Os07g0506700)
mRNA, complete cds
Length = 2424
Score = 371 bits (187), Expect = 6e-99
Identities = 451/539 (83%)
Strand = Plus / Plus
Query: 434 ctgcacctcttcacaaaacatgcaccagacttatccacgttaggtacatttcttgcttgt 493
||||| ||||||| || |||||| | |||| ||||| |||||| |||||||||||||||
Sbjct: 404 ctgcatctcttcagaagacatgcgctggactcatccatgttaggcacatttcttgcttgt 463
Query: 494 acggacaagggcaaagcaagtgtgacatctgttgcaaaagaaaacacgccgtctgactcg 553
|| || ||||| |||||| ||| | ||||| ||||| ||||| | | || ||| |
Sbjct: 464 acagagaaggggaaagcatatgtcaagtctgtcgcaaaggaaaatgcatcctcggacatg 523
Query: 554 gatgttgggccatcaagcacttgggacgtgtgtaacaagggtaaattgcagttttcatct 613
| |||||||||||||||| | ||||| ||| | || ||||| | |||| ||||| ||
Sbjct: 524 gctgttgggccatcaagctcatgggatgtgagcaattcgggtacagtgcaattttcttca 583
Query: 614 gttgatgctcgtgagaactatgcaatgttcggagggaatggcatggaagtgaacttgtgg 673
|| |||||| |||| | ||| || |||||||||||||| || || ||||| || ||||||
Sbjct: 584 gtggatgctggtgaaagctacgcgatgttcggagggaaaggaatagaagtcaatttgtgg 643
Query: 674 gatatcacatcttgtagtaagatatggtctgctaagtctccccgagctaacaatgttggt 733
|||||||||||||||||||||||||||||||| |||||||| |||| |||| | ||
Sbjct: 644 gatatcacatcttgtagtaagatatggtctgccaagtctcctcgaggcaacagtcttcag 703
Query: 734 atatttactaaaccttggttcactgctggaactttcctgtgcaaggatgatcaccgtaaa 793
||||| ||| |||||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct: 704 atattcactgcaccttggttcactgctggaacttttttgtgcaaggatgaccatcgtaaa 763
Query: 794 attgtagcctgtacaaataatcatcaggttcgcttatacgatactgcttcgcaaagaaga 853
||||||||||| |||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 764 attgtagcctgcacaaataatcatcaggttcgcttatatgacactgcttcccaaagaagg 823
Query: 854 tctgttgtttcagttgattttagggagtcaccaatcaaggcagttgtaggggatccagat 913
|||| ||||||||||||||||||||||||||||||||||||||| | ||| ||| ||
Sbjct: 824 cctgtaatttcagttgattttagggagtcaccaatcaaggcagttgctgaggacccaaat 883
Query: 914 ggacatactgtctatattgggacagcaacaggagacctcgcttcctttgacatgagaac 972
|||||| ||||||| ||||| |||| || ||| ||||| ||||||||||||||||||||
Sbjct: 884 ggacatgctgtctacattggtacaggaagaggggaccttgcttcctttgacatgagaac 942
Score = 232 bits (117), Expect = 4e-57
Identities = 204/233 (87%)
Strand = Plus / Plus
Query: 974 ggaaaactactcggatgctatgttggtaaatgcagtggaagtattaggtcgatagctagg 1033
||||||||||| || |||| || |||||||||||||||||||||||| || |||| |||
Sbjct: 1773 ggaaaactacttggttgctttgctggtaaatgcagtggaagtattagatctatagttaga 1832
Query: 1034 catccggagctgcctttgatagcatcttgcggattggacagctacttacgaatctgggat 1093
||||| ||||| ||||||||||||||||| ||| ||||||| |||||||| ||||||||
Sbjct: 1833 catccagagctacctttgatagcatcttgtggactggacagttacttacgcatctgggac 1892
Query: 1094 acaaatacaaggcagccgctttctgctgtctatctcaagcagcacctcacaacagtggtt 1153
|||||||||||||||| ||| ||||| |||| |||||||||||||| ||| | ||||||
Sbjct: 1893 acaaatacaaggcagctgctctctgcggtcttcctcaagcagcacctgacagctgtggtt 1952
Query: 1154 attgattcacatttctcagctgaagaatctgaggagaataaatccaagcagcc 1206
||||||||||||||||| |||||||| ||||||| |||||||||||||||
Sbjct: 1953 attgattcacatttctccactgaagaactcgaggagactaaatccaagcagcc 2005
Score = 216 bits (109), Expect = 2e-52
Identities = 202/233 (86%)
Strand = Plus / Plus
Query: 125 gagagccctgggtgcccgccgctccgcgccatcaccaccgacatcctcggcctcataaaa 184
|||||||| || |||||||||||||| ||| ||||||||||||||||||||||||| |||
Sbjct: 89 gagagccccggctgcccgccgctccgggccctcaccaccgacatcctcggcctcatcaaa 148
Query: 185 gtcgtcgaggcccgcgctaggccggcgggcgtcgccaaggtcgtcgagacgtggggcgaa 244
||||| ||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gtcgtggaggcccgcacgaagccggcgggcgtcgccaaggtcgtcgagacgtggggcgcg 208
Query: 245 ccggacgcctccagggccatcctcgtcgcttcactcgccgaccgatccgtcgaccccgtt 304
|| ||||| || | ||| |||||| ||| || ||||||||||| ||||||||||||||
Sbjct: 209 cccgacgcgccccgcgccgtcctcgccgcctcgctcgccgaccgcgccgtcgaccccgtt 268
Query: 305 ttggccgtcgcaaggaagaacggtgtggtcgagttgctcaatcccctcaatgg 357
|||||||| || |||||||||| ||||| ||| |||| ||||| || |||||
Sbjct: 269 ttggccgtggcgcggaagaacggcgtggttgagctgctgaatccactgaatgg 321
Score = 60.0 bits (30), Expect = 3e-05
Identities = 80/97 (82%), Gaps = 6/97 (6%)
Strand = Plus / Plus
Query: 1494 atgacagtgatgctgagatgtatgcctcaaagagaataaaatctgaatccggcgaaagaa 1553
||||||||||| |||| ||| | |||||||||||| |||||||| | |||| ||
Sbjct: 2101 atgacagtgattctgaaatgcacacctcaaagagaaaaaaatctg------gtgaaaaaa 2154
Query: 1554 gcaaaggcacgaaaaagaaaagcaagaagcaacaagt 1590
||||||| | ||||||||||||||||||||| |||||
Sbjct: 2155 gcaaaggaatgaaaaagaaaagcaagaagcagcaagt 2191
>dbj|AK073959.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033071L22, full
insert sequence
Length = 2425
Score = 371 bits (187), Expect = 6e-99
Identities = 451/539 (83%)
Strand = Plus / Plus
Query: 434 ctgcacctcttcacaaaacatgcaccagacttatccacgttaggtacatttcttgcttgt 493
||||| ||||||| || |||||| | |||| ||||| |||||| |||||||||||||||
Sbjct: 405 ctgcatctcttcagaagacatgcgctggactcatccatgttaggcacatttcttgcttgt 464
Query: 494 acggacaagggcaaagcaagtgtgacatctgttgcaaaagaaaacacgccgtctgactcg 553
|| || ||||| |||||| ||| | ||||| ||||| ||||| | | || ||| |
Sbjct: 465 acagagaaggggaaagcatatgtcaagtctgtcgcaaaggaaaatgcatcctcggacatg 524
Query: 554 gatgttgggccatcaagcacttgggacgtgtgtaacaagggtaaattgcagttttcatct 613
| |||||||||||||||| | ||||| ||| | || ||||| | |||| ||||| ||
Sbjct: 525 gctgttgggccatcaagctcatgggatgtgagcaattcgggtacagtgcaattttcttca 584
Query: 614 gttgatgctcgtgagaactatgcaatgttcggagggaatggcatggaagtgaacttgtgg 673
|| |||||| |||| | ||| || |||||||||||||| || || ||||| || ||||||
Sbjct: 585 gtggatgctggtgaaagctacgcgatgttcggagggaaaggaatagaagtcaatttgtgg 644
Query: 674 gatatcacatcttgtagtaagatatggtctgctaagtctccccgagctaacaatgttggt 733
|||||||||||||||||||||||||||||||| |||||||| |||| |||| | ||
Sbjct: 645 gatatcacatcttgtagtaagatatggtctgccaagtctcctcgaggcaacagtcttcag 704
Query: 734 atatttactaaaccttggttcactgctggaactttcctgtgcaaggatgatcaccgtaaa 793
||||| ||| |||||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct: 705 atattcactgcaccttggttcactgctggaacttttttgtgcaaggatgaccatcgtaaa 764
Query: 794 attgtagcctgtacaaataatcatcaggttcgcttatacgatactgcttcgcaaagaaga 853
||||||||||| |||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 765 attgtagcctgcacaaataatcatcaggttcgcttatatgacactgcttcccaaagaagg 824
Query: 854 tctgttgtttcagttgattttagggagtcaccaatcaaggcagttgtaggggatccagat 913
|||| ||||||||||||||||||||||||||||||||||||||| | ||| ||| ||
Sbjct: 825 cctgtaatttcagttgattttagggagtcaccaatcaaggcagttgctgaggacccaaat 884
Query: 914 ggacatactgtctatattgggacagcaacaggagacctcgcttcctttgacatgagaac 972
|||||| ||||||| ||||| |||| || ||| ||||| ||||||||||||||||||||
Sbjct: 885 ggacatgctgtctacattggtacaggaagaggggaccttgcttcctttgacatgagaac 943
Score = 232 bits (117), Expect = 4e-57
Identities = 204/233 (87%)
Strand = Plus / Plus
Query: 974 ggaaaactactcggatgctatgttggtaaatgcagtggaagtattaggtcgatagctagg 1033
||||||||||| || |||| || |||||||||||||||||||||||| || |||| |||
Sbjct: 1774 ggaaaactacttggttgctttgctggtaaatgcagtggaagtattagatctatagttaga 1833
Query: 1034 catccggagctgcctttgatagcatcttgcggattggacagctacttacgaatctgggat 1093
||||| ||||| ||||||||||||||||| ||| ||||||| |||||||| ||||||||
Sbjct: 1834 catccagagctacctttgatagcatcttgtggactggacagttacttacgcatctgggac 1893
Query: 1094 acaaatacaaggcagccgctttctgctgtctatctcaagcagcacctcacaacagtggtt 1153
|||||||||||||||| ||| ||||| |||| |||||||||||||| ||| | ||||||
Sbjct: 1894 acaaatacaaggcagctgctctctgcggtcttcctcaagcagcacctgacagctgtggtt 1953
Query: 1154 attgattcacatttctcagctgaagaatctgaggagaataaatccaagcagcc 1206
||||||||||||||||| |||||||| ||||||| |||||||||||||||
Sbjct: 1954 attgattcacatttctccactgaagaactcgaggagactaaatccaagcagcc 2006
Score = 216 bits (109), Expect = 2e-52
Identities = 202/233 (86%)
Strand = Plus / Plus
Query: 125 gagagccctgggtgcccgccgctccgcgccatcaccaccgacatcctcggcctcataaaa 184
|||||||| || |||||||||||||| ||| ||||||||||||||||||||||||| |||
Sbjct: 90 gagagccccggctgcccgccgctccgggccctcaccaccgacatcctcggcctcatcaaa 149
Query: 185 gtcgtcgaggcccgcgctaggccggcgggcgtcgccaaggtcgtcgagacgtggggcgaa 244
||||| ||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gtcgtggaggcccgcacgaagccggcgggcgtcgccaaggtcgtcgagacgtggggcgcg 209
Query: 245 ccggacgcctccagggccatcctcgtcgcttcactcgccgaccgatccgtcgaccccgtt 304
|| ||||| || | ||| |||||| ||| || ||||||||||| ||||||||||||||
Sbjct: 210 cccgacgcgccccgcgccgtcctcgccgcctcgctcgccgaccgcgccgtcgaccccgtt 269
Query: 305 ttggccgtcgcaaggaagaacggtgtggtcgagttgctcaatcccctcaatgg 357
|||||||| || |||||||||| ||||| ||| |||| ||||| || |||||
Sbjct: 270 ttggccgtggcgcggaagaacggcgtggttgagctgctgaatccactgaatgg 322
Score = 60.0 bits (30), Expect = 3e-05
Identities = 80/97 (82%), Gaps = 6/97 (6%)
Strand = Plus / Plus
Query: 1494 atgacagtgatgctgagatgtatgcctcaaagagaataaaatctgaatccggcgaaagaa 1553
||||||||||| |||| ||| | |||||||||||| |||||||| | |||| ||
Sbjct: 2102 atgacagtgattctgaaatgcacacctcaaagagaaaaaaatctg------gtgaaaaaa 2155
Query: 1554 gcaaaggcacgaaaaagaaaagcaagaagcaacaagt 1590
||||||| | ||||||||||||||||||||| |||||
Sbjct: 2156 gcaaaggaatgaaaaagaaaagcaagaagcagcaagt 2192
>dbj|AP008213.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
Length = 29644043
Score = 155 bits (78), Expect = 7e-34
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 819 aggttcgcttatacgatactgcttcgcaaagaagatctgttgtttcagttgattttaggg 878
||||||||||||| || |||||||| |||||||| |||| ||||||||||||||||||
Sbjct: 19180601 aggttcgcttatatgacactgcttcccaaagaaggcctgtaatttcagttgattttaggg 19180542
Query: 879 agtcaccaatcaaggcagttgtaggggatccagatggacatactgtctatattgggacag 938
||||||||||||||||||||| | ||| ||| |||||||| ||||||| ||||| ||||
Sbjct: 19180541 agtcaccaatcaaggcagttgctgaggacccaaatggacatgctgtctacattggtacag 19180482
Query: 939 caacaggagacctcgcttcctttgacatgagaac 972
|| ||| ||||| ||||||||||||||||||||
Sbjct: 19180481 gaagaggggaccttgcttcctttgacatgagaac 19180448
Score = 115 bits (58), Expect = 6e-22
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 745 accttggttcactgctggaactttcctgtgcaaggatgatcaccgtaaaattgtagcctg 804
|||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 19180986 accttggttcactgctggaacttttttgtgcaaggatgaccatcgtaaaattgtagcctg 19180927
Query: 805 tacaaataatcatcaggt 822
|||||||||||||||||
Sbjct: 19180926 cacaaataatcatcaggt 19180909
Score = 103 bits (52), Expect = 2e-18
Identities = 103/120 (85%)
Strand = Plus / Minus
Query: 184 agtcgtcgaggcccgcgctaggccggcgggcgtcgccaaggtcgtcgagacgtggggcga 243
|||||| ||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 19182152 agtcgtggaggcccgcacgaagccggcgggcgtcgccaaggtcgtcgagacgtggggcgc 19182093
Query: 244 accggacgcctccagggccatcctcgtcgcttcactcgccgaccgatccgtcgaccccgt 303
|| ||||| || | ||| |||||| ||| || ||||||||||| |||||||||||||
Sbjct: 19182092 gcccgacgcgccccgcgccgtcctcgccgcctcgctcgccgaccgcgccgtcgaccccgt 19182033
Score = 97.6 bits (49), Expect = 1e-16
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 974 ggaaaactactcggatgctatgttggtaaatgcagtggaagtattaggtcgatagctagg 1033
||||||||||| || |||| || |||||||||||||||||||||||| || |||| |||
Sbjct: 19179617 ggaaaactacttggttgctttgctggtaaatgcagtggaagtattagatctatagttaga 19179558
Query: 1034 catccggagctgcctttgatagcatcttg 1062
||||| ||||| |||||||||||||||||
Sbjct: 19179557 catccagagctacctttgatagcatcttg 19179529
Score = 83.8 bits (42), Expect = 2e-12
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 659 gaagtgaacttgtgggatatcacatcttgtagtaagatatggtctgctaagtct 712
||||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 19181187 gaagtcaatttgtgggatatcacatcttgtagtaagatatggtctgccaagtct 19181134
Score = 81.8 bits (41), Expect = 8e-12
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 125 gagagccctgggtgcccgccgctccgcgccatcaccaccgacatcctcggcctcataaaa 184
|||||||| || |||||||||||||| ||| ||||||||||||||||||||||||| |||
Sbjct: 19182326 gagagccccggctgcccgccgctccgggccctcaccaccgacatcctcggcctcatcaaa 19182267
Query: 185 g 185
|
Sbjct: 19182266 g 19182266
Score = 63.9 bits (32), Expect = 2e-06
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1127 ctcaagcagcacctcacaacagtggttattgattcacatttctc 1170
|||||||||||||| ||| | |||||||||||||||||||||||
Sbjct: 19178841 ctcaagcagcacctgacagctgtggttattgattcacatttctc 19178798
Score = 63.9 bits (32), Expect = 2e-06
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1068 tggacagctacttacgaatctgggatacaaatacaaggcagccgctttctgc 1119
||||||| |||||||| |||||||| |||||||||||||||| ||| |||||
Sbjct: 19179367 tggacagttacttacgcatctgggacacaaatacaaggcagctgctctctgc 19179316
Score = 60.0 bits (30), Expect = 3e-05
Identities = 80/97 (82%), Gaps = 6/97 (6%)
Strand = Plus / Minus
Query: 1494 atgacagtgatgctgagatgtatgcctcaaagagaataaaatctgaatccggcgaaagaa 1553
||||||||||| |||| ||| | |||||||||||| |||||||| | |||| ||
Sbjct: 19178393 atgacagtgattctgaaatgcacacctcaaagagaaaaaaatctg------gtgaaaaaa 19178340
Query: 1554 gcaaaggcacgaaaaagaaaagcaagaagcaacaagt 1590
||||||| | ||||||||||||||||||||| |||||
Sbjct: 19178339 gcaaaggaatgaaaaagaaaagcaagaagcagcaagt 19178303
Score = 48.1 bits (24), Expect = 0.11
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 472 gttaggtacatttcttgcttgtacggacaagggcaaagca 511
|||||| ||||||||||||||||| || ||||| ||||||
Sbjct: 19181518 gttaggcacatttcttgcttgtacagagaaggggaaagca 19181479
>dbj|AP005127.5 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBb0062D12
Length = 155408
Score = 155 bits (78), Expect = 7e-34
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 819 aggttcgcttatacgatactgcttcgcaaagaagatctgttgtttcagttgattttaggg 878
||||||||||||| || |||||||| |||||||| |||| ||||||||||||||||||
Sbjct: 103996 aggttcgcttatatgacactgcttcccaaagaaggcctgtaatttcagttgattttaggg 103937
Query: 879 agtcaccaatcaaggcagttgtaggggatccagatggacatactgtctatattgggacag 938
||||||||||||||||||||| | ||| ||| |||||||| ||||||| ||||| ||||
Sbjct: 103936 agtcaccaatcaaggcagttgctgaggacccaaatggacatgctgtctacattggtacag 103877
Query: 939 caacaggagacctcgcttcctttgacatgagaac 972
|| ||| ||||| ||||||||||||||||||||
Sbjct: 103876 gaagaggggaccttgcttcctttgacatgagaac 103843
Score = 115 bits (58), Expect = 6e-22
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 745 accttggttcactgctggaactttcctgtgcaaggatgatcaccgtaaaattgtagcctg 804
|||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 104381 accttggttcactgctggaacttttttgtgcaaggatgaccatcgtaaaattgtagcctg 104322
Query: 805 tacaaataatcatcaggt 822
|||||||||||||||||
Sbjct: 104321 cacaaataatcatcaggt 104304
Score = 103 bits (52), Expect = 2e-18
Identities = 103/120 (85%)
Strand = Plus / Minus
Query: 184 agtcgtcgaggcccgcgctaggccggcgggcgtcgccaaggtcgtcgagacgtggggcga 243
|||||| ||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 105547 agtcgtggaggcccgcacgaagccggcgggcgtcgccaaggtcgtcgagacgtggggcgc 105488
Query: 244 accggacgcctccagggccatcctcgtcgcttcactcgccgaccgatccgtcgaccccgt 303
|| ||||| || | ||| |||||| ||| || ||||||||||| |||||||||||||
Sbjct: 105487 gcccgacgcgccccgcgccgtcctcgccgcctcgctcgccgaccgcgccgtcgaccccgt 105428
Score = 97.6 bits (49), Expect = 1e-16
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 974 ggaaaactactcggatgctatgttggtaaatgcagtggaagtattaggtcgatagctagg 1033
||||||||||| || |||| || |||||||||||||||||||||||| || |||| |||
Sbjct: 103012 ggaaaactacttggttgctttgctggtaaatgcagtggaagtattagatctatagttaga 102953
Query: 1034 catccggagctgcctttgatagcatcttg 1062
||||| ||||| |||||||||||||||||
Sbjct: 102952 catccagagctacctttgatagcatcttg 102924
Score = 83.8 bits (42), Expect = 2e-12
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 659 gaagtgaacttgtgggatatcacatcttgtagtaagatatggtctgctaagtct 712
||||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 104582 gaagtcaatttgtgggatatcacatcttgtagtaagatatggtctgccaagtct 104529
Score = 81.8 bits (41), Expect = 8e-12
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 125 gagagccctgggtgcccgccgctccgcgccatcaccaccgacatcctcggcctcataaaa 184
|||||||| || |||||||||||||| ||| ||||||||||||||||||||||||| |||
Sbjct: 105721 gagagccccggctgcccgccgctccgggccctcaccaccgacatcctcggcctcatcaaa 105662
Query: 185 g 185
|
Sbjct: 105661 g 105661
Score = 63.9 bits (32), Expect = 2e-06
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1127 ctcaagcagcacctcacaacagtggttattgattcacatttctc 1170
|||||||||||||| ||| | |||||||||||||||||||||||
Sbjct: 102236 ctcaagcagcacctgacagctgtggttattgattcacatttctc 102193
Score = 63.9 bits (32), Expect = 2e-06
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1068 tggacagctacttacgaatctgggatacaaatacaaggcagccgctttctgc 1119
||||||| |||||||| |||||||| |||||||||||||||| ||| |||||
Sbjct: 102762 tggacagttacttacgcatctgggacacaaatacaaggcagctgctctctgc 102711
Score = 60.0 bits (30), Expect = 3e-05
Identities = 80/97 (82%), Gaps = 6/97 (6%)
Strand = Plus / Minus
Query: 1494 atgacagtgatgctgagatgtatgcctcaaagagaataaaatctgaatccggcgaaagaa 1553
||||||||||| |||| ||| | |||||||||||| |||||||| | |||| ||
Sbjct: 101788 atgacagtgattctgaaatgcacacctcaaagagaaaaaaatctg------gtgaaaaaa 101735
Query: 1554 gcaaaggcacgaaaaagaaaagcaagaagcaacaagt 1590
||||||| | ||||||||||||||||||||| |||||
Sbjct: 101734 gcaaaggaatgaaaaagaaaagcaagaagcagcaagt 101698
Score = 48.1 bits (24), Expect = 0.11
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 472 gttaggtacatttcttgcttgtacggacaagggcaaagca 511
|||||| ||||||||||||||||| || ||||| ||||||
Sbjct: 104913 gttaggcacatttcttgcttgtacagagaaggggaaagca 104874
>gb|AY772018.1 | Methylophaga aminosulfidovorans strain SK1 putative aminomethyl
transferase protein gene, partial cds; and
nitrate/nitrite sensor protein (narQ), nitrate/nitrite
regulatory protein (narL), signal transduction histidine
kinase, putative flavin-containing monooxygenase,
putative cupin superfamily enzymes, and GMP synthase
genes, complete cds
Length = 8120
Score = 42.1 bits (21), Expect = 7.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 326 ggtgtggtcgagttgctcaat 346
|||||||||||||||||||||
Sbjct: 3578 ggtgtggtcgagttgctcaat 3598
>emb|AL929336.12 | Zebrafish DNA sequence from clone CH211-163J21, complete sequence
Length = 156284
Score = 42.1 bits (21), Expect = 7.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1163 catttctcagctgaagaatct 1183
|||||||||||||||||||||
Sbjct: 10362 catttctcagctgaagaatct 10342
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 316,984,796
Number of extensions: 17561493
Number of successful extensions: 404482
Number of sequences better than 10.0: 41
Number of HSP's gapped: 404478
Number of HSP's successfully gapped: 71
Length of query: 1823
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1800
Effective length of database: 18,503,978,556
Effective search space: 33307161400800
Effective search space used: 33307161400800
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)