ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf169i11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001054095.1| Oryza sativa (japonica cultivar-group) Os02g... 476 e-131
2dbj|AK068423.1| Oryza sativa (japonica cultivar-group) cDNA clon... 476 e-131
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 172 2e-39
4dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic D... 172 2e-39
5gb|AC018796.4|AC018796 Homo sapiens chromosome 8, clone RP11-51K... 44 1.1
6gb|CP000384.1| Mycobacterium sp. MCS, complete genome 42 4.4
7ref|XR_003811.1| PREDICTED: Mus musculus similar to High mobilit... 42 4.4
8ref|XR_002016.1| PREDICTED: Mus musculus similar to High mobilit... 42 4.4
9gb|AC167164.6| Mus musculus chromosome 7, clone RP24-276M8, comp... 42 4.4
10gb|AC121301.8| Mus musculus chromosome 7, clone RP23-432H1, comp... 42 4.4
11gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosom... 42 4.4
12gb|AC022402.5| Homo sapiens chromosome 06 clone RP11-70I3, compl... 42 4.4
13emb|Z49066.1|CEC04H4 Caenorhabditis elegans Cosmid C04H4, comple... 42 4.4
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.4
15emb|CR391930.9| Zebrafish DNA sequence from clone CH211-154B16 i... 42 4.4
16emb|AL353580.7| Human DNA sequence from clone RP11-248N6 on chro... 42 4.4
17gb|AC110911.18| Mus musculus chromosome 7, clone RP24-357A15, co... 42 4.4
18emb|AL034345.3|HS207H1 Human DNA sequence from clone RP1-207H1 o... 42 4.4
19gb|AC018574.6| Homo sapiens chromosome , clone RP11-4G2, complet... 42 4.4
20gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 4.4
21emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 42 4.4
22emb|BX640431.1| Bordetella parapertussis strain 12822, complete ... 42 4.4
23dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic D... 42 4.4
24gb|AC068614.5| Homo sapiens BAC clone RP11-512N1 from 2, complet... 42 4.4
25dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 4.4
26gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa004... 42 4.4
27dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 42 4.4
28gb|AC171404.5| Mus musculus chromosome 7, clone RP24-235N21, com... 42 4.4 
>ref|NM_001054095.1| Oryza sativa (japonica cultivar-group) Os02g0643500 (Os02g0643500)
           mRNA, complete cds
          Length = 1080
 Score =  476 bits (240), Expect = e-131
 Identities = 486/568 (85%)
 Strand = Plus / Plus

                                                                       
Query: 260 acgcagatctgaacaagtacgaggcggatcagaggggcgagttcggcatcggttcagccg 319
           |||| ||||| ||||||| ||||||||| ||| | || ||||||||||| || || || |
Sbjct: 276 acgcggatcttaacaagttcgaggcggagcagcgtggggagttcggcattggctccgctg 335

                                                                       
Query: 320 cgcagttcggcaatgcggacctcaaaaacactgtgcatgttaacgaaaacttcaggcggg 379
           ||||||| ||    || |||||||| ||  | || |||||||| || |||||||||||||
Sbjct: 336 cgcagtttgggtcggccgacctcaagaaggccgtccatgttaatgagaacttcaggcggg 395

                                                                       
Query: 380 cgaacttcacatctgctgatatgagggaatcagattttagtggttccacattcaatggtg 439
           | ||||||||  |||||||||||||||| ||| |||| ||||||||||||||||||||||
Sbjct: 396 caaacttcactgctgctgatatgagggagtcaaatttcagtggttccacattcaatggtg 455

                                                                       
Query: 440 cctatatggaaaaggctgttgctttcagagcgaatttcacaggtgcagatttgagtgaca 499
           ||||| | ||||||||||||||||  ||||| ||||| || ||||||||||||||||| |
Sbjct: 456 cctatcttgaaaaggctgttgcttatagagcaaattttactggtgcagatttgagtgata 515

                                                                       
Query: 500 ctttaatggatcgcatggttctcaatgaagctaatctcacaaatgctgtgctttcgcgga 559
           | || |||||||||||||| |||||||||||||| || |||||||||||||||   ||| 
Sbjct: 516 ccttgatggatcgcatggtgctcaatgaagctaaccttacaaatgctgtgcttgtacggt 575

                                                                       
Query: 560 ctgtccttacacgcagtgatctcggtggagcaaccattgaaggtgctgacttcagcgatg 619
           | |||||||| || || ||||| |||||||||| |||||||||||| |||||||| ||||
Sbjct: 576 cagtccttacgcgtagcgatcttggtggagcaatcattgaaggtgcagacttcagtgatg 635

                                                                       
Query: 620 ctgttattgacctaccacagaaactggctttgtgcaaatatgcaagcgggaccaatccta 679
           |||||||||||||  ||||||||| ||||||||||||||||||||  || || || ||| 
Sbjct: 636 ctgttattgacctgacacagaaacaggctttgtgcaaatatgcaaatggaacaaaccctt 695

                                                                       
Query: 680 taactggagtcagcacccggaagagccttgggtgtggtaacagtcgccggaatgcatatg 739
           |||| || |||||||| ||||| |||||||| || || ||||||||||| ||||||||||
Sbjct: 696 taacaggggtcagcacacggaaaagccttggatgcggcaacagtcgccgaaatgcatatg 755

                                                                       
Query: 740 ggagcccttcatcccctcttttaagtgccccgccacctaaacttctggaccgtgatggtt 799
           |||||||||| ||||||||||| ||||| || ||||| ||||||||||||||||||||||
Sbjct: 756 ggagcccttcctcccctcttttgagtgctccaccacccaaacttctggaccgtgatggtt 815

                                       
Query: 800 tttgtgatgaagctagtggtttgtgtga 827
           | || |||||||| | |||| |||||||
Sbjct: 816 tctgcgatgaagcaactggtatgtgtga 843
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>dbj|AK068423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153L01, full
           insert sequence
          Length = 1081

 Score =  476 bits (240), Expect = e-131
 Identities = 486/568 (85%)
 Strand = Plus / Plus

                                                                       
Query: 260 acgcagatctgaacaagtacgaggcggatcagaggggcgagttcggcatcggttcagccg 319
           |||| ||||| ||||||| ||||||||| ||| | || ||||||||||| || || || |
Sbjct: 277 acgcggatcttaacaagttcgaggcggagcagcgtggggagttcggcattggctccgctg 336

                                                                       
Query: 320 cgcagttcggcaatgcggacctcaaaaacactgtgcatgttaacgaaaacttcaggcggg 379
           ||||||| ||    || |||||||| ||  | || |||||||| || |||||||||||||
Sbjct: 337 cgcagtttgggtcggccgacctcaagaaggccgtccatgttaatgagaacttcaggcggg 396

                                                                       
Query: 380 cgaacttcacatctgctgatatgagggaatcagattttagtggttccacattcaatggtg 439
           | ||||||||  |||||||||||||||| ||| |||| ||||||||||||||||||||||
Sbjct: 397 caaacttcactgctgctgatatgagggagtcaaatttcagtggttccacattcaatggtg 456

                                                                       
Query: 440 cctatatggaaaaggctgttgctttcagagcgaatttcacaggtgcagatttgagtgaca 499
           ||||| | ||||||||||||||||  ||||| ||||| || ||||||||||||||||| |
Sbjct: 457 cctatcttgaaaaggctgttgcttatagagcaaattttactggtgcagatttgagtgata 516

                                                                       
Query: 500 ctttaatggatcgcatggttctcaatgaagctaatctcacaaatgctgtgctttcgcgga 559
           | || |||||||||||||| |||||||||||||| || |||||||||||||||   ||| 
Sbjct: 517 ccttgatggatcgcatggtgctcaatgaagctaaccttacaaatgctgtgcttgtacggt 576

                                                                       
Query: 560 ctgtccttacacgcagtgatctcggtggagcaaccattgaaggtgctgacttcagcgatg 619
           | |||||||| || || ||||| |||||||||| |||||||||||| |||||||| ||||
Sbjct: 577 cagtccttacgcgtagcgatcttggtggagcaatcattgaaggtgcagacttcagtgatg 636

                                                                       
Query: 620 ctgttattgacctaccacagaaactggctttgtgcaaatatgcaagcgggaccaatccta 679
           |||||||||||||  ||||||||| ||||||||||||||||||||  || || || ||| 
Sbjct: 637 ctgttattgacctgacacagaaacaggctttgtgcaaatatgcaaatggaacaaaccctt 696

                                                                       
Query: 680 taactggagtcagcacccggaagagccttgggtgtggtaacagtcgccggaatgcatatg 739
           |||| || |||||||| ||||| |||||||| || || ||||||||||| ||||||||||
Sbjct: 697 taacaggggtcagcacacggaaaagccttggatgcggcaacagtcgccgaaatgcatatg 756

                                                                       
Query: 740 ggagcccttcatcccctcttttaagtgccccgccacctaaacttctggaccgtgatggtt 799
           |||||||||| ||||||||||| ||||| || ||||| ||||||||||||||||||||||
Sbjct: 757 ggagcccttcctcccctcttttgagtgctccaccacccaaacttctggaccgtgatggtt 816

                                       
Query: 800 tttgtgatgaagctagtggtttgtgtga 827
           | || |||||||| | |||| |||||||
Sbjct: 817 tctgcgatgaagcaactggtatgtgtga 844
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  172 bits (87), Expect = 2e-39
 Identities = 159/183 (86%)
 Strand = Plus / Plus

                                                                            
Query: 645      ggctttgtgcaaatatgcaagcgggaccaatcctataactggagtcagcacccggaagag 704
                ||||||||||||||||||||  || || || ||| |||| || |||||||| ||||| ||
Sbjct: 25877102 ggctttgtgcaaatatgcaaatggaacaaaccctttaacaggggtcagcacacggaaaag 25877161

                                                                            
Query: 705      ccttgggtgtggtaacagtcgccggaatgcatatgggagcccttcatcccctcttttaag 764
                |||||| || || ||||||||||| |||||||||||||||||||| ||||||||||| ||
Sbjct: 25877162 ccttggatgcggcaacagtcgccgaaatgcatatgggagcccttcctcccctcttttgag 25877221

                                                                            
Query: 765      tgccccgccacctaaacttctggaccgtgatggtttttgtgatgaagctagtggtttgtg 824
                ||| || ||||| ||||||||||||||||||||||| || |||||||| | |||| ||||
Sbjct: 25877222 tgctccaccacccaaacttctggaccgtgatggtttctgcgatgaagcaactggtatgtg 25877281

                   
Query: 825      tga 827
                |||
Sbjct: 25877282 tga 25877284



 Score =  119 bits (60), Expect = 2e-23
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                            
Query: 373      aggcgggcgaacttcacatctgctgatatgagggaatcagattttagtggttccacattc 432
                |||||||| ||||||||  |||||||||||||||| ||| |||| |||||||||||||||
Sbjct: 25875325 aggcgggcaaacttcactgctgctgatatgagggagtcaaatttcagtggttccacattc 25875384

                                                            
Query: 433      aatggtgcctatatggaaaaggctgttgctttcagagcgaattt 476
                |||||||||||| | ||||||||||||||||  ||||| |||||
Sbjct: 25875385 aatggtgcctatcttgaaaaggctgttgcttatagagcaaattt 25875428



 Score =  119 bits (60), Expect = 2e-23
 Identities = 108/124 (87%)
 Strand = Plus / Plus

                                                                            
Query: 520      ctcaatgaagctaatctcacaaatgctgtgctttcgcggactgtccttacacgcagtgat 579
                |||||||||||||| || |||||||||||||||   ||| | |||||||| || || |||
Sbjct: 25876313 ctcaatgaagctaaccttacaaatgctgtgcttgtacggtcagtccttacgcgtagcgat 25876372

                                                                            
Query: 580      ctcggtggagcaaccattgaaggtgctgacttcagcgatgctgttattgacctaccacag 639
                || |||||||||| |||||||||||| |||||||| |||||||||||||||||  |||||
Sbjct: 25876373 cttggtggagcaatcattgaaggtgcagacttcagtgatgctgttattgacctgacacag 25876432

                    
Query: 640      aaac 643
                ||||
Sbjct: 25876433 aaac 25876436



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 479      caggtgcagatttgagtgacactttaatggatcgcatggt 518
                ||||||||||||||||||| || || ||||||||||||||
Sbjct: 25875881 caggtgcagatttgagtgataccttgatggatcgcatggt 25875920



 Score = 46.1 bits (23), Expect = 0.28
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 260      acgcagatctgaacaagtacgaggcggatcagaggggcgagttcggcatcggttcagccg 319
                |||| ||||| ||||||| ||||||||| ||| | || ||||||||||| || || || |
Sbjct: 25874411 acgcggatcttaacaagttcgaggcggagcagcgtggggagttcggcattggctccgctg 25874470

                       
Query: 320      cgcagtt 326
                |||||||
Sbjct: 25874471 cgcagtt 25874477
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>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1282_H11
          Length = 143314

 Score =  172 bits (87), Expect = 2e-39
 Identities = 159/183 (86%)
 Strand = Plus / Plus

                                                                         
Query: 645   ggctttgtgcaaatatgcaagcgggaccaatcctataactggagtcagcacccggaagag 704
             ||||||||||||||||||||  || || || ||| |||| || |||||||| ||||| ||
Sbjct: 28443 ggctttgtgcaaatatgcaaatggaacaaaccctttaacaggggtcagcacacggaaaag 28502

                                                                         
Query: 705   ccttgggtgtggtaacagtcgccggaatgcatatgggagcccttcatcccctcttttaag 764
             |||||| || || ||||||||||| |||||||||||||||||||| ||||||||||| ||
Sbjct: 28503 ccttggatgcggcaacagtcgccgaaatgcatatgggagcccttcctcccctcttttgag 28562

                                                                         
Query: 765   tgccccgccacctaaacttctggaccgtgatggtttttgtgatgaagctagtggtttgtg 824
             ||| || ||||| ||||||||||||||||||||||| || |||||||| | |||| ||||
Sbjct: 28563 tgctccaccacccaaacttctggaccgtgatggtttctgcgatgaagcaactggtatgtg 28622

                
Query: 825   tga 827
             |||
Sbjct: 28623 tga 28625



 Score =  119 bits (60), Expect = 2e-23
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                         
Query: 373   aggcgggcgaacttcacatctgctgatatgagggaatcagattttagtggttccacattc 432
             |||||||| ||||||||  |||||||||||||||| ||| |||| |||||||||||||||
Sbjct: 26666 aggcgggcaaacttcactgctgctgatatgagggagtcaaatttcagtggttccacattc 26725

                                                         
Query: 433   aatggtgcctatatggaaaaggctgttgctttcagagcgaattt 476
             |||||||||||| | ||||||||||||||||  ||||| |||||
Sbjct: 26726 aatggtgcctatcttgaaaaggctgttgcttatagagcaaattt 26769



 Score =  119 bits (60), Expect = 2e-23
 Identities = 108/124 (87%)
 Strand = Plus / Plus

                                                                         
Query: 520   ctcaatgaagctaatctcacaaatgctgtgctttcgcggactgtccttacacgcagtgat 579
             |||||||||||||| || |||||||||||||||   ||| | |||||||| || || |||
Sbjct: 27654 ctcaatgaagctaaccttacaaatgctgtgcttgtacggtcagtccttacgcgtagcgat 27713

                                                                         
Query: 580   ctcggtggagcaaccattgaaggtgctgacttcagcgatgctgttattgacctaccacag 639
             || |||||||||| |||||||||||| |||||||| |||||||||||||||||  |||||
Sbjct: 27714 cttggtggagcaatcattgaaggtgcagacttcagtgatgctgttattgacctgacacag 27773

                 
Query: 640   aaac 643
             ||||
Sbjct: 27774 aaac 27777



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 479   caggtgcagatttgagtgacactttaatggatcgcatggt 518
             ||||||||||||||||||| || || ||||||||||||||
Sbjct: 27222 caggtgcagatttgagtgataccttgatggatcgcatggt 27261



 Score = 46.1 bits (23), Expect = 0.28
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 260   acgcagatctgaacaagtacgaggcggatcagaggggcgagttcggcatcggttcagccg 319
             |||| ||||| ||||||| ||||||||| ||| | || ||||||||||| || || || |
Sbjct: 25752 acgcggatcttaacaagttcgaggcggagcagcgtggggagttcggcattggctccgctg 25811

                    
Query: 320   cgcagtt 326
             |||||||
Sbjct: 25812 cgcagtt 25818
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>gb|AC018796.4|AC018796 Homo sapiens chromosome 8, clone RP11-51K12, complete sequence
          Length = 148189

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 445   atggaaaaggctgttgctttcagagcgaatttca 478
             ||||||||||| || |||||||||| ||||||||
Sbjct: 47031 atggaaaaggcagtagctttcagagagaatttca 46998
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>gb|CP000384.1| Mycobacterium sp. MCS, complete genome
          Length = 5705448

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 141     ggcgaccaccgaccgctccggcggcggca 169
               ||||||||||| |||| ||||||||||||
Sbjct: 1390289 ggcgaccaccgcccgcgccggcggcggca 1390261
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>ref|XR_003811.1| PREDICTED: Mus musculus similar to High mobility group protein 1
           (HMG-1) (High mobility group protein B1) (Amphoterin)
           (Heparin-binding protein p30) (LOC545257), mRNA
          Length = 717

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 262 gcagatctgaacaagtacgag 282
           |||||||||||||||||||||
Sbjct: 521 gcagatctgaacaagtacgag 541
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>ref|XR_002016.1| PREDICTED: Mus musculus similar to High mobility group protein 1
           (HMG-1) (High mobility group protein B1) (Amphoterin)
           (Heparin-binding protein p30) (LOC545257), mRNA
          Length = 717

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 262 gcagatctgaacaagtacgag 282
           |||||||||||||||||||||
Sbjct: 521 gcagatctgaacaagtacgag 541
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>gb|AC167164.6| Mus musculus chromosome 7, clone RP24-276M8, complete sequence
          Length = 171048

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 909   gggtaaaagataaagcagaat 929
             |||||||||||||||||||||
Sbjct: 36683 gggtaaaagataaagcagaat 36663
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>gb|AC121301.8| Mus musculus chromosome 7, clone RP23-432H1, complete sequence
          Length = 205639

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 344    aaaacactgtgcatgttaacgaaaa 368
              ||||||||||||||||||| |||||
Sbjct: 161571 aaaacactgtgcatgttaaagaaaa 161595
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>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete sequence
          Length = 208462

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 262    gcagatctgaacaagtacgag 282
              |||||||||||||||||||||
Sbjct: 111448 gcagatctgaacaagtacgag 111468
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>gb|AC022402.5| Homo sapiens chromosome 06 clone RP11-70I3, complete sequence
          Length = 164270

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1057   acattgaataaatatttgatg 1077
              |||||||||||||||||||||
Sbjct: 157845 acattgaataaatatttgatg 157865
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>emb|Z49066.1|CEC04H4 Caenorhabditis elegans Cosmid C04H4, complete sequence
          Length = 33421

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1006  aaactagggaatcttctggaa 1026
             |||||||||||||||||||||
Sbjct: 23839 aaactagggaatcttctggaa 23819
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 182      cgtcgccggcgccgccgaggt 202
                |||||||||||||||||||||
Sbjct: 38478062 cgtcgccggcgccgccgaggt 38478082
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>emb|CR391930.9| Zebrafish DNA sequence from clone CH211-154B16 in linkage group 15,
              complete sequence
          Length = 175972

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 5      ccccacctcacccacctctct 25
              |||||||||||||||||||||
Sbjct: 111714 ccccacctcacccacctctct 111734
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>emb|AL353580.7| Human DNA sequence from clone RP11-248N6 on chromosome 13 Contains two
             olfactory receptor pseudogenes and a nucleophosmin
             (nucleolar phosphoprotein B23, numatrin) NPM1 pseudogene,
             complete sequence
          Length = 162695

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1058  cattgaataaatatttgatgc 1078
             |||||||||||||||||||||
Sbjct: 27301 cattgaataaatatttgatgc 27281
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>gb|AC110911.18| Mus musculus chromosome 7, clone RP24-357A15, complete sequence
          Length = 146978

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 909   gggtaaaagataaagcagaat 929
             |||||||||||||||||||||
Sbjct: 23105 gggtaaaagataaagcagaat 23085
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>emb|AL034345.3|HS207H1 Human DNA sequence from clone RP1-207H1 on chromosome 6p21.1-21.31
             Contains part of the DNAH8 gene for dynein axonemal heavy
             polypeptide 8, the 3' part of a novel gene and a 40S
             ribosomal protein S2 (RPS2) pseudogene, complete sequence
          Length = 84756

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1057  acattgaataaatatttgatg 1077
             |||||||||||||||||||||
Sbjct: 52009 acattgaataaatatttgatg 52029
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>gb|AC018574.6| Homo sapiens chromosome , clone RP11-4G2, complete sequence
          Length = 171858

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 745   ccttcatcccctcttttaagt 765
             |||||||||||||||||||||
Sbjct: 86138 ccttcatcccctcttttaagt 86118
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 188    cggcgccgccgaggtggcgcg 208
              |||||||||||||||||||||
Sbjct: 830194 cggcgccgccgaggtggcgcg 830214
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 186    gccggcgccgccgaggtggcg 206
              |||||||||||||||||||||
Sbjct: 232345 gccggcgccgccgaggtggcg 232365
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>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 186   gccggcgccgccgaggtggcg 206
             |||||||||||||||||||||
Sbjct: 70281 gccggcgccgccgaggtggcg 70261
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>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0408G07
          Length = 126631

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 182   cgtcgccggcgccgccgaggt 202
             |||||||||||||||||||||
Sbjct: 63477 cgtcgccggcgccgccgaggt 63497
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>gb|AC068614.5| Homo sapiens BAC clone RP11-512N1 from 2, complete sequence
          Length = 164706

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1017  tcttctggaaagaggtatgct 1037
             |||||||||||||||||||||
Sbjct: 12039 tcttctggaaagaggtatgct 12059
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 180     tacgtcgccggcgccgccgag 200
               |||||||||||||||||||||
Sbjct: 3007383 tacgtcgccggcgccgccgag 3007363
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>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence
          Length = 193444

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 182   cgtcgccggcgccgccgaggt 202
             |||||||||||||||||||||
Sbjct: 71159 cgtcgccggcgccgccgaggt 71179
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1055    tgacattgaataaatatttga 1075
               |||||||||||||||||||||
Sbjct: 5211282 tgacattgaataaatatttga 5211302
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>gb|AC171404.5| Mus musculus chromosome 7, clone RP24-235N21, complete sequence
          Length = 146054

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 344    aaaacactgtgcatgttaacgaaaa 368
              ||||||||||||||||||| |||||
Sbjct: 127225 aaaacactgtgcatgttaaagaaaa 127201


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 204,587,760
Number of extensions: 10909968
Number of successful extensions: 238079
Number of sequences better than 10.0: 28
Number of HSP's gapped: 238079
Number of HSP's successfully gapped: 38
Length of query: 1174
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1151
Effective length of database: 18,503,978,556
Effective search space: 21298079317956
Effective search space used: 21298079317956
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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