ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf171n22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001071419.1| Oryza sativa (japonica cultivar-group) Os10g... 88 1e-13
2gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 gen... 88 1e-13
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 88 1e-13
4dbj|AK071436.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 1e-13
5ref|XM_001170315.1| PREDICTED: Pan troglodytes centromere protei... 46 0.35
6ref|XM_001170294.1| PREDICTED: Pan troglodytes centromere protei... 46 0.35
7ref|XM_517376.2| PREDICTED: Pan troglodytes centromere protein E... 46 0.35
8ref|XM_001170275.1| PREDICTED: Pan troglodytes centromere protei... 46 0.35
9ref|XM_001170168.1| PREDICTED: Pan troglodytes centromere protei... 46 0.35
10ref|XM_001110550.1| PREDICTED: Macaca mulatta similar to centrom... 46 0.35
11ref|XM_001110512.1| PREDICTED: Macaca mulatta similar to centrom... 46 0.35
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.35
13dbj|AB209996.1| Homo sapiens mRNA for CENPE variant protein, par... 46 0.35
14gb|AC079919.5| Homo sapiens BAC clone RP11-291N5 from 4, complet... 46 0.35
15ref|NM_001813.2| Homo sapiens centromere protein E, 312kDa (CENP... 46 0.35
16emb|Z15005.1|HSCENPE H.sapiens CENP-E mRNA 46 0.35
17emb|AL606625.3|OSJN00039 Oryza sativa genomic DNA, chromosome 4,... 46 0.35
18gb|EF029175.1| Pollicipes pollicipes isolate PPOL846_CV tRNA-Gln... 44 1.4
19gb|EF029174.1| Pollicipes pollicipes isolate PPOL845_CV tRNA-Gln... 44 1.4
20gb|EF029161.1| Pollicipes pollicipes isolate PPOL832_CV tRNA-Gln... 44 1.4
21gb|EF029153.1| Pollicipes pollicipes isolate PPOL823_CV tRNA-Gln... 44 1.4
22gb|EF029152.1| Pollicipes pollicipes isolate PPOL822_CV tRNA-Gln... 44 1.4
23gb|EF029147.1| Pollicipes pollicipes isolate PPOL817_CV tRNA-Gln... 44 1.4
24gb|EF029144.1| Pollicipes pollicipes isolate PPOL814_CV tRNA-Gln... 44 1.4
25gb|EF029136.1| Pollicipes pollicipes isolate PPOL831_CV tRNA-Gln... 44 1.4
26gb|EF029129.1| Pollicipes pollicipes isolate PPOL800_CV tRNA-Gln... 44 1.4
27ref|XM_526632.2| PREDICTED: Pan troglodytes matrix, extracellula... 44 1.4
28ref|NM_020203.2| Homo sapiens matrix, extracellular phosphoglyco... 44 1.4
29ref|XM_001098930.1| PREDICTED: Macaca mulatta matrix, extracellu... 44 1.4
30ref|XM_001099032.1| PREDICTED: Macaca mulatta matrix, extracellu... 44 1.4
31ref|XM_001099140.1| PREDICTED: Macaca mulatta matrix, extracellu... 44 1.4
32gb|AY360386.1| Oryza sativa (japonica cultivar-group) chromosome... 44 1.4
33gb|AC122903.4| Mus musculus BAC clone RP23-44N5 from chromosome ... 44 1.4
34gb|AC124519.2| Mus musculus BAC clone RP23-393I12 from 1, comple... 44 1.4
35dbj|AK075076.1| Homo sapiens cDNA FLJ90595 fis, clone PLACE1001183 44 1.4
36gb|AC068308.12| Homo sapiens 3 BAC RP11-275H4 (Roswell Park Canc... 44 1.4
37gb|AC093768.3| Homo sapiens BAC clone RP11-113G13 from 4, comple... 44 1.4
38dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.4
39dbj|AB060891.1| Macaca fascicularis brain cDNA clone:QtrA-13588,... 44 1.4
40dbj|AB056814.1| Macaca fascicularis brain cDNA clone:QflA-15292,... 44 1.4
41dbj|AB050259.1| Macaca fascicularis brain cDNA, clone:QnpA-21045... 44 1.4
42gb|AC091022.4| Homo sapiens chromosome 8, clone RP11-65A5, compl... 44 1.4
43gb|AF325916.1|AF325916 Homo sapiens matrix extracellular phospho... 44 1.4
44emb|AL683883.26| Mouse DNA sequence from clone RP23-361B8 on chr... 44 1.4
45dbj|AP005832.2| Oryza sativa (japonica cultivar-group) genomic D... 44 1.4
46dbj|AP006482.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.4
47emb|AJ276396.1|HSA276396 Homo sapiens mRNA for matrix extracellu... 44 1.4
48dbj|AB046056.1| Macaca fascicularis mRNA for matrix extracellula... 44 1.4
49ref|XM_419025.2| PREDICTED: Gallus gallus hypothetical LOC420941... 42 5.4
50gb|EF029157.1| Pollicipes pollicipes isolate PPOL827_CV tRNA-Gln... 42 5.4
51gb|AC139852.18| Medicago truncatula clone mth2-8n13, complete se... 42 5.4
52ref|XM_001058241.1| PREDICTED: Rattus norvegicus hypothetical pr... 42 5.4
53gb|AC183763.2| Pan troglodytes BAC clone CH251-685C13 from chrom... 42 5.4
54gb|AC183529.4| Pan troglodytes BAC clone CH251-669H19 from chrom... 42 5.4
55gb|AC183269.3| Pan troglodytes BAC clone CH251-685E7 from chromo... 42 5.4
56emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 42 5.4
57gb|AC122357.4| Mus musculus BAC clone RP23-403O8 from chromosome... 42 5.4
58gb|AE013199.1| Thermoanaerobacter tengcongensis MB4, section 226... 42 5.4
59ref|XM_847538.1| PREDICTED: Canis familiaris similar to centrome... 42 5.4
60ref|XM_545851.2| PREDICTED: Canis familiaris similar to leucine-... 42 5.4
61gb|AC160113.2| Mus musculus BAC clone RP24-84O12 from chromosome... 42 5.4
62gb|AC156023.2| Mus musculus BAC clone RP23-210I15 from chromosom... 42 5.4
63gb|AC160135.2| Mus musculus BAC clone RP23-160P11 from chromosom... 42 5.4
64gb|AC146160.3| Pan troglodytes BAC clone RP43-1E22 from chromoso... 42 5.4
65gb|AC154794.2| Mus musculus BAC clone RP24-485J1 from 16, comple... 42 5.4
66gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome 42 5.4
67gb|AC171274.2| Gallus gallus BAC clone CH261-121C13 from chromos... 42 5.4
68emb|AL732459.5| Mouse DNA sequence from clone RP23-115J4 on chro... 42 5.4 
>ref|NM_001071419.1| Oryza sativa (japonica cultivar-group) Os10g0483100 (Os10g0483100)
           mRNA, complete cds
          Length = 1632
 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                               
Query: 574 tgatgatgagatagagcttactgtggaagatcttgtgagcatagctgaagag 625
           ||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 730 tgatgatgatatagagcttactgtggaagatcttttgagcatagctgaagag 781



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 1048 tgtggcgaaaaagaagagcagcctgaaagatatggtgg 1085
            |||| ||||||||||||||||| ||||||||| |||||
Sbjct: 1357 tgtgacgaaaaagaagagcagcttgaaagataaggtgg 1394
to top
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete
             sequence
          Length = 153182

 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                 
Query: 574   tgatgatgagatagagcttactgtggaagatcttgtgagcatagctgaagag 625
             ||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 86427 tgatgatgatatagagcttactgtggaagatcttttgagcatagctgaagag 86376



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 1048  tgtggcgaaaaagaagagcagcctgaaagatatggtgg 1085
             |||| ||||||||||||||||| ||||||||| |||||
Sbjct: 84828 tgtgacgaaaaagaagagcagcttgaaagataaggtgg 84791
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                    
Query: 574      tgatgatgagatagagcttactgtggaagatcttgtgagcatagctgaagag 625
                ||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 17731307 tgatgatgatatagagcttactgtggaagatcttttgagcatagctgaagag 17731256



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 1048     tgtggcgaaaaagaagagcagcctgaaagatatggtgg 1085
                |||| ||||||||||||||||| ||||||||| |||||
Sbjct: 17729708 tgtgacgaaaaagaagagcagcttgaaagataaggtgg 17729671
to top
>dbj|AK071436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093J24, full
           insert sequence
          Length = 1634

 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                               
Query: 574 tgatgatgagatagagcttactgtggaagatcttgtgagcatagctgaagag 625
           ||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 730 tgatgatgatatagagcttactgtggaagatcttttgagcatagctgaagag 781



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 1048 tgtggcgaaaaagaagagcagcctgaaagatatggtgg 1085
            |||| ||||||||||| ||||| ||||||||| |||||
Sbjct: 1357 tgtgacgaaaaagaagggcagcttgaaagataaggtgg 1394
to top
>ref|XM_001170315.1| PREDICTED: Pan troglodytes centromere protein E, transcript variant 4
            (CENPE), mRNA
          Length = 8248

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 448  acttgaagaaattgggaaaacaa 470
            |||||||||||||||||||||||
Sbjct: 2396 acttgaagaaattgggaaaacaa 2418
to top
>ref|XM_001170294.1| PREDICTED: Pan troglodytes centromere protein E, transcript variant 3
            (CENPE), mRNA
          Length = 8504

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 448  acttgaagaaattgggaaaacaa 470
            |||||||||||||||||||||||
Sbjct: 2472 acttgaagaaattgggaaaacaa 2494
to top
>ref|XM_517376.2| PREDICTED: Pan troglodytes centromere protein E, transcript variant 5
            (CENPE), mRNA
          Length = 8503

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 448  acttgaagaaattgggaaaacaa 470
            |||||||||||||||||||||||
Sbjct: 2471 acttgaagaaattgggaaaacaa 2493
to top
>ref|XM_001170275.1| PREDICTED: Pan troglodytes centromere protein E, transcript variant 2
            (CENPE), mRNA
          Length = 8612

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 448  acttgaagaaattgggaaaacaa 470
            |||||||||||||||||||||||
Sbjct: 2472 acttgaagaaattgggaaaacaa 2494
to top
>ref|XM_001170168.1| PREDICTED: Pan troglodytes centromere protein E, transcript variant 1
            (CENPE), mRNA
          Length = 8611

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 448  acttgaagaaattgggaaaacaa 470
            |||||||||||||||||||||||
Sbjct: 2471 acttgaagaaattgggaaaacaa 2493
to top
>ref|XM_001110550.1| PREDICTED: Macaca mulatta similar to centromere protein E, transcript
            variant 2 (LOC711186), mRNA
          Length = 8505

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 448  acttgaagaaattgggaaaacaa 470
            |||||||||||||||||||||||
Sbjct: 2472 acttgaagaaattgggaaaacaa 2494
to top
>ref|XM_001110512.1| PREDICTED: Macaca mulatta similar to centromere protein E, transcript
            variant 1 (LOC711186), mRNA
          Length = 8613

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 448  acttgaagaaattgggaaaacaa 470
            |||||||||||||||||||||||
Sbjct: 2472 acttgaagaaattgggaaaacaa 2494
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 1247     agtagcttttcttttctcttttg 1269
                |||||||||||||||||||||||
Sbjct: 15975021 agtagcttttcttttctcttttg 15974999
to top
>dbj|AB209996.1| Homo sapiens mRNA for CENPE variant protein, partial cds, clone:
            ef02778
          Length = 8167

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 448  acttgaagaaattgggaaaacaa 470
            |||||||||||||||||||||||
Sbjct: 2322 acttgaagaaattgggaaaacaa 2344
to top
>gb|AC079919.5| Homo sapiens BAC clone RP11-291N5 from 4, complete sequence
          Length = 168311

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 448   acttgaagaaattgggaaaacaa 470
             |||||||||||||||||||||||
Sbjct: 59249 acttgaagaaattgggaaaacaa 59227
to top
>ref|NM_001813.2| Homo sapiens centromere protein E, 312kDa (CENPE), mRNA
          Length = 8630

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 448  acttgaagaaattgggaaaacaa 470
            |||||||||||||||||||||||
Sbjct: 2472 acttgaagaaattgggaaaacaa 2494
to top
>emb|Z15005.1|HSCENPE H.sapiens CENP-E mRNA
          Length = 8257

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 448  acttgaagaaattgggaaaacaa 470
            |||||||||||||||||||||||
Sbjct: 2472 acttgaagaaattgggaaaacaa 2494
to top
>emb|AL606625.3|OSJN00039 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032I19,
             complete sequence
          Length = 145383

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 1247  agtagcttttcttttctcttttg 1269
             |||||||||||||||||||||||
Sbjct: 59234 agtagcttttcttttctcttttg 59212
to top
>gb|EF029175.1| Pollicipes pollicipes isolate PPOL846_CV tRNA-Gln gene, partial
            sequence; tRNA-Ser gene, complete sequence; and 12S
            ribosomal RNA gene, partial sequence; mitochondrial
          Length = 477

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 226  cttttcttttctcttttgaggg 247
to top
>gb|EF029174.1| Pollicipes pollicipes isolate PPOL845_CV tRNA-Gln gene, partial
            sequence; tRNA-Ser gene, complete sequence; and 12S
            ribosomal RNA gene, partial sequence; mitochondrial
          Length = 477

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 226  cttttcttttctcttttgaggg 247
to top
>gb|EF029161.1| Pollicipes pollicipes isolate PPOL832_CV tRNA-Gln gene, partial
            sequence; tRNA-Ser gene, complete sequence; and 12S
            ribosomal RNA gene, partial sequence; mitochondrial
          Length = 476

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 226  cttttcttttctcttttgaggg 247
to top
>gb|EF029153.1| Pollicipes pollicipes isolate PPOL823_CV tRNA-Gln gene, partial
            sequence; tRNA-Ser gene, complete sequence; and 12S
            ribosomal RNA gene, partial sequence; mitochondrial
          Length = 475

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 225  cttttcttttctcttttgaggg 246
to top
>gb|EF029152.1| Pollicipes pollicipes isolate PPOL822_CV tRNA-Gln gene, partial
            sequence; tRNA-Ser gene, complete sequence; and 12S
            ribosomal RNA gene, partial sequence; mitochondrial
          Length = 477

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 226  cttttcttttctcttttgaggg 247
to top
>gb|EF029147.1| Pollicipes pollicipes isolate PPOL817_CV tRNA-Gln gene, partial
            sequence; tRNA-Ser gene, complete sequence; and 12S
            ribosomal RNA gene, partial sequence; mitochondrial
          Length = 476

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 226  cttttcttttctcttttgaggg 247
to top
>gb|EF029144.1| Pollicipes pollicipes isolate PPOL814_CV tRNA-Gln gene, partial
            sequence; tRNA-Ser gene, complete sequence; and 12S
            ribosomal RNA gene, partial sequence; mitochondrial
          Length = 477

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 226  cttttcttttctcttttgaggg 247
to top
>gb|EF029136.1| Pollicipes pollicipes isolate PPOL831_CV tRNA-Gln gene, partial
            sequence; tRNA-Ser gene, complete sequence; and 12S
            ribosomal RNA gene, partial sequence; mitochondrial
          Length = 476

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 226  cttttcttttctcttttgaggg 247
to top
>gb|EF029129.1| Pollicipes pollicipes isolate PPOL800_CV tRNA-Gln gene, partial
            sequence; tRNA-Ser gene, complete sequence; and 12S
            ribosomal RNA gene, partial sequence; mitochondrial
          Length = 475

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 225  cttttcttttctcttttgaggg 246
to top
>ref|XM_526632.2| PREDICTED: Pan troglodytes matrix, extracellular phosphoglycoprotein
            with ASARM motif (bone) (MEPE), mRNA
          Length = 1981

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 1187 cttttcttttctcttttgaggg 1166
to top
>ref|NM_020203.2| Homo sapiens matrix, extracellular phosphoglycoprotein with ASARM
            motif (bone) (MEPE), mRNA
          Length = 1979

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 1192 cttttcttttctcttttgaggg 1171
to top
>ref|XM_001098930.1| PREDICTED: Macaca mulatta matrix, extracellular phosphoglycoprotein
            with ASARM motif (bone), transcript variant 1 (MEPE),
            mRNA
          Length = 2250

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 1459 cttttcttttctcttttgaggg 1438
to top
>ref|XM_001099032.1| PREDICTED: Macaca mulatta matrix, extracellular phosphoglycoprotein
            with ASARM motif (bone), transcript variant 2 (MEPE),
            mRNA
          Length = 1984

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 1193 cttttcttttctcttttgaggg 1172
to top
>ref|XM_001099140.1| PREDICTED: Macaca mulatta matrix, extracellular phosphoglycoprotein
            with ASARM motif (bone), transcript variant 3 (MEPE),
            mRNA
          Length = 2146

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 1355 cttttcttttctcttttgaggg 1334
to top
>gb|AY360386.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC
            OSJNBa0017M13, complete sequence
          Length = 161902

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1247 agtagcttttcttttctctttt 1268
            ||||||||||||||||||||||
Sbjct: 9958 agtagcttttcttttctctttt 9937



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1247  agtagcttttcttttctctttt 1268
             ||||||||||||||||||||||
Sbjct: 46645 agtagcttttcttttctctttt 46624
to top
>gb|AC122903.4| Mus musculus BAC clone RP23-44N5 from chromosome 1, complete sequence
          Length = 169832

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 80     aaacccatcagaaggaagagaaaaat 105
              |||||||||| |||||||||||||||
Sbjct: 155424 aaacccatcaaaaggaagagaaaaat 155449
to top
>gb|AC124519.2| Mus musculus BAC clone RP23-393I12 from 1, complete sequence
          Length = 195739

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 80    aaacccatcagaaggaagagaaaaat 105
             |||||||||| |||||||||||||||
Sbjct: 17826 aaacccatcaaaaggaagagaaaaat 17851
to top
>dbj|AK075076.1| Homo sapiens cDNA FLJ90595 fis, clone PLACE1001183
          Length = 2031

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 1238 cttttcttttctcttttgaggg 1217
to top
>gb|AC068308.12| Homo sapiens 3 BAC RP11-275H4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 154495

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 248    aggaaagtttgtggaagagctg 269
              ||||||||||||||||||||||
Sbjct: 117330 aggaaagtttgtggaagagctg 117309
to top
>gb|AC093768.3| Homo sapiens BAC clone RP11-113G13 from 4, complete sequence
          Length = 187624

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1252  cttttcttttctcttttgaggg 1273
             ||||||||||||||||||||||
Sbjct: 76720 cttttcttttctcttttgaggg 76699
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 1247     agtagcttttcttttctctttt 1268
                ||||||||||||||||||||||
Sbjct: 13193480 agtagcttttcttttctctttt 13193459



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 1247     agtagcttttcttttctctttt 1268
                ||||||||||||||||||||||
Sbjct: 13285483 agtagcttttcttttctctttt 13285462



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 1247     agtagcttttcttttctctttt 1268
                ||||||||||||||||||||||
Sbjct: 13322170 agtagcttttcttttctctttt 13322149
to top
>dbj|AB060891.1| Macaca fascicularis brain cDNA clone:QtrA-13588, similar to human
            matrix, extracellular phosphoglycoprotein with ASARM
            motif (bone) (MEPE), mRNA,. NM_020203
          Length = 2259

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 1461 cttttcttttctcttttgaggg 1440
to top
>dbj|AB056814.1| Macaca fascicularis brain cDNA clone:QflA-15292, similar to human
            matrix, extracellular phosphoglycoprotein with ASARM
            motif (bone) (MEPE), mRNA., NM_020203
          Length = 2085

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 1303 cttttcttttctcttttgaggg 1282
to top
>dbj|AB050259.1| Macaca fascicularis brain cDNA, clone:QnpA-21045, similar to human
            matrix, extracellular phosphoglycoprotein with ASARM
            motif (bone) (MEPE), mRNA, NM_020203.1
          Length = 2140

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 1355 cttttcttttctcttttgaggg 1334
to top
>gb|AC091022.4| Homo sapiens chromosome 8, clone RP11-65A5, complete sequence
          Length = 155949

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1247  agtagcttttcttttctctttt 1268
             ||||||||||||||||||||||
Sbjct: 45694 agtagcttttcttttctctttt 45715
to top
>gb|AF325916.1|AF325916 Homo sapiens matrix extracellular phosphoglycoprotein precursor
            (MEPE) mRNA, complete cds
          Length = 1617

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 1192 cttttcttttctcttttgaggg 1171
to top
>emb|AL683883.26| Mouse DNA sequence from clone RP23-361B8 on chromosome X, complete
            sequence
          Length = 190863

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1241 ataataagtagcttttcttttc 1262
            ||||||||||||||||||||||
Sbjct: 8227 ataataagtagcttttcttttc 8206
to top
>dbj|AP005832.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1136D08
          Length = 176635

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1247  agtagcttttcttttctctttt 1268
             ||||||||||||||||||||||
Sbjct: 36952 agtagcttttcttttctctttt 36931



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1247  agtagcttttcttttctctttt 1268
             ||||||||||||||||||||||
Sbjct: 73639 agtagcttttcttttctctttt 73618
to top
>dbj|AP006482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone: B1101E07
          Length = 158084

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1247  agtagcttttcttttctctttt 1268
             ||||||||||||||||||||||
Sbjct: 69831 agtagcttttcttttctctttt 69810
to top
>emb|AJ276396.1|HSA276396 Homo sapiens mRNA for matrix extracellular phosphoglycoprotein (MEPE
            gene)
          Length = 1989

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 1202 cttttcttttctcttttgaggg 1181
to top
>dbj|AB046056.1| Macaca fascicularis mRNA for matrix extracellular          
            phosphoglycoprotein(MEPE gene), complete cds
          Length = 2095

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1252 cttttcttttctcttttgaggg 1273
            ||||||||||||||||||||||
Sbjct: 1314 cttttcttttctcttttgaggg 1293
to top
>ref|XM_419025.2| PREDICTED: Gallus gallus hypothetical LOC420941 (LOC420941), mRNA
          Length = 1085

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 291 ggatgctggaggatgtgggat 311
           |||||||||||||||||||||
Sbjct: 282 ggatgctggaggatgtgggat 262
to top
>gb|EF029157.1| Pollicipes pollicipes isolate PPOL827_CV tRNA-Gln gene, partial
            sequence; tRNA-Ser gene, complete sequence; and 12S
            ribosomal RNA gene, partial sequence; mitochondrial
          Length = 476

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1252 cttttcttttctcttttgagg 1272
            |||||||||||||||||||||
Sbjct: 226  cttttcttttctcttttgagg 246
to top
>gb|AC139852.18| Medicago truncatula clone mth2-8n13, complete sequence
          Length = 155295

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 445   tgaacttgaagaaattgggaa 465
             |||||||||||||||||||||
Sbjct: 34408 tgaacttgaagaaattgggaa 34388
to top
>ref|XM_001058241.1| PREDICTED: Rattus norvegicus hypothetical protein LOC681743
            (LOC681743), mRNA
          Length = 864

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1031 caagtgcagggggtgcctgtg 1051
            |||||||||||||||||||||
Sbjct: 538  caagtgcagggggtgcctgtg 518
to top
>gb|AC183763.2| Pan troglodytes BAC clone CH251-685C13 from chromosome 3, complete
             sequence
          Length = 186561

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 78    gcaaacccatcagaaggaaga 98
             |||||||||||||||||||||
Sbjct: 37907 gcaaacccatcagaaggaaga 37927
to top
>gb|AC183529.4| Pan troglodytes BAC clone CH251-669H19 from chromosome 3, complete
              sequence
          Length = 216860

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 78     gcaaacccatcagaaggaaga 98
              |||||||||||||||||||||
Sbjct: 201445 gcaaacccatcagaaggaaga 201425
to top
>gb|AC183269.3| Pan troglodytes BAC clone CH251-685E7 from chromosome 3, complete
              sequence
          Length = 220398

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 78     gcaaacccatcagaaggaaga 98
              |||||||||||||||||||||
Sbjct: 107917 gcaaacccatcagaaggaaga 107897
to top
>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1252   cttttcttttctcttttgagg 1272
              |||||||||||||||||||||
Sbjct: 641749 cttttcttttctcttttgagg 641769
to top
>gb|AC122357.4| Mus musculus BAC clone RP23-403O8 from chromosome 13, complete sequence
          Length = 203039

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 89     agaaggaagagaaaaattgtggata 113
              |||||||||| ||||||||||||||
Sbjct: 152331 agaaggaagaaaaaaattgtggata 152307
to top
>gb|AE013199.1| Thermoanaerobacter tengcongensis MB4, section 226 of 244 of the
            complete genome
          Length = 13138

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 331  aataactgatgatgagataga 351
            |||||||||||||||||||||
Sbjct: 4501 aataactgatgatgagataga 4481
to top
>ref|XM_847538.1| PREDICTED: Canis familiaris similar to centromere protein E
            (LOC610125), mRNA
          Length = 3718

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 448  acttgaagaaattgggaaaac 468
            |||||||||||||||||||||
Sbjct: 2368 acttgaagaaattgggaaaac 2388
to top
>ref|XM_545851.2| PREDICTED: Canis familiaris similar to leucine-rich repeat kinase 1
           (LOC488733), mRNA
          Length = 1890

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 397 agaaaagaccagaaggaagca 417
           |||||||||||||||||||||
Sbjct: 445 agaaaagaccagaaggaagca 465
to top
>gb|AC160113.2| Mus musculus BAC clone RP24-84O12 from chromosome 9, complete sequence
          Length = 223852

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1253  ttttcttttctcttttgaggg 1273
             |||||||||||||||||||||
Sbjct: 11683 ttttcttttctcttttgaggg 11663
to top
>gb|AC156023.2| Mus musculus BAC clone RP23-210I15 from chromosome 16, complete sequence
          Length = 196765

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1245   taagtagcttttcttttctct 1265
              |||||||||||||||||||||
Sbjct: 186365 taagtagcttttcttttctct 186345
to top
>gb|AC160135.2| Mus musculus BAC clone RP23-160P11 from chromosome 9, complete sequence
          Length = 205946

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1253  ttttcttttctcttttgaggg 1273
             |||||||||||||||||||||
Sbjct: 40433 ttttcttttctcttttgaggg 40453
to top
>gb|AC146160.3| Pan troglodytes BAC clone RP43-1E22 from chromosome 7, complete sequence
          Length = 182457

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 78     gcaaacccatcagaaggaaga 98
              |||||||||||||||||||||
Sbjct: 105277 gcaaacccatcagaaggaaga 105257
to top
>gb|AC154794.2| Mus musculus BAC clone RP24-485J1 from 16, complete sequence
          Length = 179257

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1245  taagtagcttttcttttctct 1265
             |||||||||||||||||||||
Sbjct: 22025 taagtagcttttcttttctct 22005
to top
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 621     aagagattataaatgctgata 641
               |||||||||||||||||||||
Sbjct: 1599507 aagagattataaatgctgata 1599487
to top
>gb|AC171274.2| Gallus gallus BAC clone CH261-121C13 from chromosome ul, complete
             sequence
          Length = 218983

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   gaatgagaggaaagtttgtgg 261
             |||||||||||||||||||||
Sbjct: 68811 gaatgagaggaaagtttgtgg 68791
to top
>emb|AL732459.5| Mouse DNA sequence from clone RP23-115J4 on chromosome X, complete
             sequence
          Length = 201897

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 251   aaagtttgtggaagagctgctacaaagaa 279
             ||||||||  |||||||||||||||||||
Sbjct: 97664 aaagtttgaagaagagctgctacaaagaa 97692


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 284,509,923
Number of extensions: 15342017
Number of successful extensions: 331218
Number of sequences better than 10.0: 68
Number of HSP's gapped: 331218
Number of HSP's successfully gapped: 76
Length of query: 1421
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1398
Effective length of database: 18,503,978,556
Effective search space: 25868562021288
Effective search space used: 25868562021288
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top