| Clone Name | FLbaf166f12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066514:Os12g0600400 | 548 | e-156 | 2 | AK066087:Os12g0192500 | 38 | 0.017 | 3 | AK122089:Os12g0192500 | 37 | 0.037 | 4 | AK100920:Os12g0192500 | 37 | 0.037 | 5 | AK101115:Os04g0436800 | 33 | 0.53 |
|---|
>AK066514:Os12g0600400 | Length = 345 Score = 548 bits (1412), Expect = e-156 Identities = 272/309 (88%), Positives = 288/309 (93%) Frame = +3 Query: 162 AMARPPILSVALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTG 341 AMARPP+LSVALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTG Sbjct: 36 AMARPPVLSVALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTG 95 Query: 342 YPKFRGQVLNGNQLWDLIEGLEENELLHYTHLLTGYIGSVSFLSTVLQVVDKLRSVNPDL 521 YP FRGQVLNG+QLWDLIEGL EN+LLHYTHLLTGYIGSVSFL+TVLQVVDKLRSVNPDL Sbjct: 96 YPTFRGQVLNGSQLWDLIEGLAENDLLHYTHLLTGYIGSVSFLTTVLQVVDKLRSVNPDL 155 Query: 522 IYVCDPVLGDEGKLYVPQDLVSVYQKKVVPVASMLTPNQFEVELLTGLRINSEQDGLKAC 701 +YVCDPVLGDEGKLYVPQDL+SVYQ+KVVPVA+MLTPNQFEVELLTGLRI E+DGLKAC Sbjct: 156 VYVCDPVLGDEGKLYVPQDLISVYQQKVVPVATMLTPNQFEVELLTGLRITCEEDGLKAC 215 Query: 702 NTLHSAGPRKVIITSALIEDKLLLIGSYKRTEEQPPEQFKIEIPKIPAYFXXXXXXXXXX 881 N LHSAGPRKV+ITSALIEDKLLLIGS+K+ +EQPPEQFKIEIPKIPAYF Sbjct: 216 NALHSAGPRKVVITSALIEDKLLLIGSHKKAKEQPPEQFKIEIPKIPAYFTGTGDLTTAL 275 Query: 882 XXXWSNKYPDNLEKAAELAVSSLQALLRRTVEDYKRAGFDPSSSSLEIRLIQSQDEIRNP 1061 WSNKYPDNLE+AAELAVSSLQALLRRTVEDYKRAGFDPS+SSLEIRLIQSQDEIR P Sbjct: 276 LLGWSNKYPDNLERAAELAVSSLQALLRRTVEDYKRAGFDPSTSSLEIRLIQSQDEIRRP 335 Query: 1062 QVTCNAVKY 1088 Q+TC AVKY Sbjct: 336 QITCKAVKY 344
>AK066087:Os12g0192500 | Length = 548 Score = 38.1 bits (87), Expect = 0.017 Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 2/102 (1%) Frame = +3 Query: 441 TGYIGSVSFLSTVLQVVDKLRSVNPDLIYVCDPVL-GDEGKLYVPQDLVSVYQKKVVPVA 617 TG + S+ + + + + K P V DPV+ G +SVY+ ++ +A Sbjct: 131 TGMLPSIGVVRVLCESLKKF----PVKALVVDPVMVSTSGDTLSESSTLSVYRDELFAMA 186 Query: 618 SMLTPNQFEV-ELLTGLRINSEQDGLKACNTLHSAGPRKVII 740 ++TPN E LL G+ + + D A +++ GP+ V++ Sbjct: 187 DIVTPNVKEASRLLGGVSLRTVSDMRNAAESIYKFGPKHVLV 228
>AK122089:Os12g0192500 | Length = 402 Score = 37.0 bits (84), Expect = 0.037 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%) Frame = +3 Query: 501 RSVNPDLIYVCDPVL-GDEGKLYVPQDLVSVYQKKVVPVASMLTPNQFEV-ELLTGLRIN 674 RS V DPV+ G +SVY+ ++ +A ++TPN E LL G+ + Sbjct: 1 RSFQSKAALVVDPVMVSTSGDTLSESSTLSVYRDELFAMADIVTPNVKEASRLLGGVSLR 60 Query: 675 SEQDGLKACNTLHSAGPRKVII 740 + D A +++ GP+ V++ Sbjct: 61 TVSDMRNAAESIYKFGPKHVLV 82
>AK100920:Os12g0192500 | Length = 402 Score = 37.0 bits (84), Expect = 0.037 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%) Frame = +3 Query: 501 RSVNPDLIYVCDPVL-GDEGKLYVPQDLVSVYQKKVVPVASMLTPNQFEV-ELLTGLRIN 674 RS V DPV+ G +SVY+ ++ +A ++TPN E LL G+ + Sbjct: 1 RSFQSKAALVVDPVMVSTSGDTLSESSTLSVYRDELFAMADIVTPNVKEASRLLGGVSLR 60 Query: 675 SEQDGLKACNTLHSAGPRKVII 740 + D A +++ GP+ V++ Sbjct: 61 TVSDMRNAAESIYKFGPKHVLV 82
>AK101115:Os04g0436800 | Length = 717 Score = 33.1 bits (74), Expect = 0.53 Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 2/78 (2%) Frame = +3 Query: 294 FDVDPINSVQFSNH--TGYPKFRGQVLNGNQLWDLIEGLEENELLHYTHLLTGYIGSVSF 467 FD+ P+ + S +G G++ + +++ EG+EE+ L+ + +LTGY+ S+ Sbjct: 312 FDLAPVKDIVMSTSIVSGLASC-GRITDAKRVF---EGMEEHNLVSWNAMLTGYVRSMD- 366 Query: 468 LSTVLQVVDKLRSVNPDL 521 L++ LQ+ ++R +L Sbjct: 367 LTSALQLFQQMRQETKEL 384 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 42,445,630 Number of extensions: 927730 Number of successful extensions: 2726 Number of sequences better than 10.0: 5 Number of HSP's gapped: 2723 Number of HSP's successfully gapped: 5 Length of query: 504 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 399 Effective length of database: 11,195,550 Effective search space: 4467024450 Effective search space used: 4467024450 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)