ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf166f12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK066514:Os12g0600400 548 e-156
2AK066087:Os12g0192500 38 0.017
3AK122089:Os12g0192500 37 0.037
4AK100920:Os12g0192500 37 0.037
5AK101115:Os04g0436800 33 0.53

>AK066514:Os12g0600400 |
          Length = 345
 Score =  548 bits (1412), Expect = e-156
 Identities = 272/309 (88%), Positives = 288/309 (93%)
 Frame = +3

Query: 162  AMARPPILSVALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTG 341
            AMARPP+LSVALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTG
Sbjct: 36   AMARPPVLSVALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTG 95

Query: 342  YPKFRGQVLNGNQLWDLIEGLEENELLHYTHLLTGYIGSVSFLSTVLQVVDKLRSVNPDL 521
            YP FRGQVLNG+QLWDLIEGL EN+LLHYTHLLTGYIGSVSFL+TVLQVVDKLRSVNPDL
Sbjct: 96   YPTFRGQVLNGSQLWDLIEGLAENDLLHYTHLLTGYIGSVSFLTTVLQVVDKLRSVNPDL 155

Query: 522  IYVCDPVLGDEGKLYVPQDLVSVYQKKVVPVASMLTPNQFEVELLTGLRINSEQDGLKAC 701
            +YVCDPVLGDEGKLYVPQDL+SVYQ+KVVPVA+MLTPNQFEVELLTGLRI  E+DGLKAC
Sbjct: 156  VYVCDPVLGDEGKLYVPQDLISVYQQKVVPVATMLTPNQFEVELLTGLRITCEEDGLKAC 215

Query: 702  NTLHSAGPRKVIITSALIEDKLLLIGSYKRTEEQPPEQFKIEIPKIPAYFXXXXXXXXXX 881
            N LHSAGPRKV+ITSALIEDKLLLIGS+K+ +EQPPEQFKIEIPKIPAYF          
Sbjct: 216  NALHSAGPRKVVITSALIEDKLLLIGSHKKAKEQPPEQFKIEIPKIPAYFTGTGDLTTAL 275

Query: 882  XXXWSNKYPDNLEKAAELAVSSLQALLRRTVEDYKRAGFDPSSSSLEIRLIQSQDEIRNP 1061
               WSNKYPDNLE+AAELAVSSLQALLRRTVEDYKRAGFDPS+SSLEIRLIQSQDEIR P
Sbjct: 276  LLGWSNKYPDNLERAAELAVSSLQALLRRTVEDYKRAGFDPSTSSLEIRLIQSQDEIRRP 335

Query: 1062 QVTCNAVKY 1088
            Q+TC AVKY
Sbjct: 336  QITCKAVKY 344



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>AK066087:Os12g0192500 |
          Length = 548

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
 Frame = +3

Query: 441 TGYIGSVSFLSTVLQVVDKLRSVNPDLIYVCDPVL-GDEGKLYVPQDLVSVYQKKVVPVA 617
           TG + S+  +  + + + K     P    V DPV+    G        +SVY+ ++  +A
Sbjct: 131 TGMLPSIGVVRVLCESLKKF----PVKALVVDPVMVSTSGDTLSESSTLSVYRDELFAMA 186

Query: 618 SMLTPNQFEV-ELLTGLRINSEQDGLKACNTLHSAGPRKVII 740
            ++TPN  E   LL G+ + +  D   A  +++  GP+ V++
Sbjct: 187 DIVTPNVKEASRLLGGVSLRTVSDMRNAAESIYKFGPKHVLV 228



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>AK122089:Os12g0192500 |
          Length = 402

 Score = 37.0 bits (84), Expect = 0.037
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +3

Query: 501 RSVNPDLIYVCDPVL-GDEGKLYVPQDLVSVYQKKVVPVASMLTPNQFEV-ELLTGLRIN 674
           RS       V DPV+    G        +SVY+ ++  +A ++TPN  E   LL G+ + 
Sbjct: 1   RSFQSKAALVVDPVMVSTSGDTLSESSTLSVYRDELFAMADIVTPNVKEASRLLGGVSLR 60

Query: 675 SEQDGLKACNTLHSAGPRKVII 740
           +  D   A  +++  GP+ V++
Sbjct: 61  TVSDMRNAAESIYKFGPKHVLV 82



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>AK100920:Os12g0192500 |
          Length = 402

 Score = 37.0 bits (84), Expect = 0.037
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +3

Query: 501 RSVNPDLIYVCDPVL-GDEGKLYVPQDLVSVYQKKVVPVASMLTPNQFEV-ELLTGLRIN 674
           RS       V DPV+    G        +SVY+ ++  +A ++TPN  E   LL G+ + 
Sbjct: 1   RSFQSKAALVVDPVMVSTSGDTLSESSTLSVYRDELFAMADIVTPNVKEASRLLGGVSLR 60

Query: 675 SEQDGLKACNTLHSAGPRKVII 740
           +  D   A  +++  GP+ V++
Sbjct: 61  TVSDMRNAAESIYKFGPKHVLV 82



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>AK101115:Os04g0436800 |
          Length = 717

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
 Frame = +3

Query: 294 FDVDPINSVQFSNH--TGYPKFRGQVLNGNQLWDLIEGLEENELLHYTHLLTGYIGSVSF 467
           FD+ P+  +  S    +G     G++ +  +++   EG+EE+ L+ +  +LTGY+ S+  
Sbjct: 312 FDLAPVKDIVMSTSIVSGLASC-GRITDAKRVF---EGMEEHNLVSWNAMLTGYVRSMD- 366

Query: 468 LSTVLQVVDKLRSVNPDL 521
           L++ LQ+  ++R    +L
Sbjct: 367 LTSALQLFQQMRQETKEL 384


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 42,445,630
Number of extensions: 927730
Number of successful extensions: 2726
Number of sequences better than 10.0: 5
Number of HSP's gapped: 2723
Number of HSP's successfully gapped: 5
Length of query: 504
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 399
Effective length of database: 11,195,550
Effective search space: 4467024450
Effective search space used: 4467024450
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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