ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf164c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK105174:Os01g0642200 55 3e-08
2AK071521:Os01g0642200 55 3e-08
3AK072242:Os10g0447900 32 0.24
4AK103001:Os08g0503000 28 2.0
5Os05g0457300:Os05g0457300 27 4.5
6AK102546:Os05g0467600 27 4.5
7AK073368:Os04g0692300 27 7.7 
>AK105174:Os01g0642200 |
          Length = 58
 Score = 54.7 bits (130), Expect = 3e-08
 Identities = 36/69 (52%), Positives = 38/69 (55%)
 Frame = +2

Query: 65  MASLKAVKPTGLEGQAKEPTKVSATKGPAKLSNTXXXXXXXXXXXXXXXXXPREPKKRVK 244
           MASLKAVKP GL   AKEP         AKLS T                 PREPKK+VK
Sbjct: 1   MASLKAVKPAGL---AKEPA--------AKLSETATKPAAAKGGVKKAEQKPREPKKKVK 49

Query: 245 STKPAAAKN 271
           S+KPAAAKN
Sbjct: 50  SSKPAAAKN 58
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>AK071521:Os01g0642200 |
          Length = 58

 Score = 54.7 bits (130), Expect = 3e-08
 Identities = 36/69 (52%), Positives = 38/69 (55%)
 Frame = +2

Query: 65  MASLKAVKPTGLEGQAKEPTKVSATKGPAKLSNTXXXXXXXXXXXXXXXXXPREPKKRVK 244
           MASLKAVKP GL   AKEP         AKLS T                 PREPKK+VK
Sbjct: 1   MASLKAVKPAGL---AKEPA--------AKLSETATKPAAAKGGVKKAEQKPREPKKKVK 49

Query: 245 STKPAAAKN 271
           S+KPAAAKN
Sbjct: 50  SSKPAAAKN 58
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>AK072242:Os10g0447900 |
          Length = 515

 Score = 31.6 bits (70), Expect = 0.24
 Identities = 18/33 (54%), Positives = 18/33 (54%)
 Frame = +3

Query: 156 SVTRRPSQQPPRAASRRLSQSHGSLRRGSRAPS 254
           S TRR S  P RAASR  S S    RR S A S
Sbjct: 109 SATRRTSSSPSRAASRSASSSSACSRRWSSASS 141
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>AK103001:Os08g0503000 |
          Length = 144

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +3

Query: 165 RRPSQQPPRAASRRLSQSHGSLRRGSRAPSQQQQKTDNGSRR 290
           +R S QPPR  SRR  +     RR  R+P  +Q +  N S+R
Sbjct: 20  KRQSLQPPRRPSRRRRR-----RRRRRSPRPRQVRRKNRSQR 56
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>Os05g0457300:Os05g0457300 |
          Length = 279

 Score = 27.3 bits (59), Expect = 4.5
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 165 RRPSQQPPRAASRRLSQSHGSLRRGSRAPS 254
           RR    PPRAA+   +   G  R G RAPS
Sbjct: 201 RRSLPSPPRAAAAATASRGGGGRGGRRAPS 230
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>AK102546:Os05g0467600 |
          Length = 417

 Score = 27.3 bits (59), Expect = 4.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 186 PRAASRRLSQSHGSLRRGSRAPSQQQQKTDNGSRRTELA 302
           P AA+RR+ +   S  R    P+  Q   DN  + +E A
Sbjct: 43  PCAATRRMEEGQASSERTPNPPTVAQSSLDNSKKDSEKA 81
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>AK073368:Os04g0692300 |
          Length = 331

 Score = 26.6 bits (57), Expect = 7.7
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 313 HGAMNYI*ILPFPSSVSHDIDHAYTGCAHN 402
           H A+ ++ ILP PSS   D D   T  A N
Sbjct: 39  HSALAFLGILPPPSSPDEDADDVATATATN 68


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 13,444,998
Number of extensions: 302393
Number of successful extensions: 894
Number of sequences better than 10.0: 7
Number of HSP's gapped: 891
Number of HSP's successfully gapped: 7
Length of query: 151
Length of database: 15,399,855
Length adjustment: 92
Effective length of query: 59
Effective length of database: 11,716,083
Effective search space: 691248897
Effective search space used: 691248897
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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